Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000254-TA|BGIBMGA000254-PA|IPR000618|Insect cuticle
protein
(279 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g46800.2 68415.m05840 zinc transporter (ZAT) identical to zin... 34 0.092
At2g46800.1 68415.m05839 zinc transporter (ZAT) identical to zin... 34 0.092
At1g67870.1 68414.m07750 glycine-rich protein contains non-conse... 34 0.092
At3g63100.1 68416.m07087 glycine-rich protein 33 0.21
At1g14440.2 68414.m01713 zinc finger homeobox family protein / Z... 31 0.86
At1g14440.1 68414.m01712 zinc finger homeobox family protein / Z... 31 0.86
At2g04620.1 68415.m00470 cation efflux family protein potential ... 31 1.1
At4g21450.2 68417.m03102 vesicle-associated membrane family prot... 29 2.6
At4g21450.1 68417.m03103 vesicle-associated membrane family prot... 29 2.6
At3g58810.2 68416.m06555 zinc transporter, putative similar to z... 29 2.6
At3g58810.1 68416.m06554 zinc transporter, putative similar to z... 29 2.6
At3g23790.1 68416.m02990 AMP-binding protein, putative similar t... 29 4.6
At4g29230.1 68417.m04181 no apical meristem (NAM) family protein... 28 8.0
>At2g46800.2 68415.m05840 zinc transporter (ZAT) identical to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; member of the cation diffusion
facilitator (CDF) family, or cation efflux (CE) family,
PMID:11500563
Length = 398
Score = 34.3 bits (75), Expect = 0.092
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 11/63 (17%)
Query: 20 GHGHGHAVSSQSIVLHTSHGHEHQGETPAHHQILTTQHFEHGGH---YDLGHHKVQHHGY 76
GH HGH+ HGH+H + H + T H H H + GH + +HH +
Sbjct: 181 GHDHGHSHGHGH-----GHGHDHHNHS---HGVTVTTHHHHHDHEHGHSHGHGEDKHHAH 232
Query: 77 TQV 79
V
Sbjct: 233 GDV 235
>At2g46800.1 68415.m05839 zinc transporter (ZAT) identical to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; member of the cation diffusion
facilitator (CDF) family, or cation efflux (CE) family,
PMID:11500563
Length = 398
Score = 34.3 bits (75), Expect = 0.092
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 11/63 (17%)
Query: 20 GHGHGHAVSSQSIVLHTSHGHEHQGETPAHHQILTTQHFEHGGH---YDLGHHKVQHHGY 76
GH HGH+ HGH+H + H + T H H H + GH + +HH +
Sbjct: 181 GHDHGHSHGHGH-----GHGHDHHNHS---HGVTVTTHHHHHDHEHGHSHGHGEDKHHAH 232
Query: 77 TQV 79
V
Sbjct: 233 GDV 235
>At1g67870.1 68414.m07750 glycine-rich protein contains
non-consensus GG donor splice site at exon2; modeled to
est match.
Length = 279
Score = 34.3 bits (75), Expect = 0.092
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 18 QDGHGHGHAVSSQSIVLHTSHGHEHQGETPAHHQILT-TQHFEHGGHYDLGHHKVQHHG 75
Q GHG H + HG EHQG HQ + QH G G H++QH G
Sbjct: 171 QGGHGMQHQ-GMHGMQHQGGHGMEHQGGHGMQHQDMHGMQHQGRHGMQHQGGHEMQHQG 228
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 35 HTSHGHEHQG-ETPAHHQILTTQHFEHGGHYDLGHHKVQHHG 75
H HG +HQG HH I QH G G H +QH G
Sbjct: 123 HEIHGMKHQGGHGIQHHDIHGMQHQGGHGMQHQGMHGMQHQG 164
>At3g63100.1 68416.m07087 glycine-rich protein
Length = 199
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 14/58 (24%)
Query: 20 GHGHGHAVSSQSIVLHTSHGHEHQ-GETPAHHQILTTQHFEHGGHYDLGHHKVQHHGY 76
GHGHGH H HG +H+ G HH+ HG H+ GH + + G+
Sbjct: 97 GHGHGHGHG------HRRHGRDHRHGRDRGHHR-------GHGHHHHRGHRRGRGRGH 141
>At1g14440.2 68414.m01713 zinc finger homeobox family protein /
ZF-HD homeobox family protein
Length = 312
Score = 31.1 bits (67), Expect = 0.86
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 11/56 (19%)
Query: 35 HTSHGHEHQGET---PAHHQILTTQ------HFE-HGGHYDLGHHKVQHH-GYTQV 79
H H H+H P H+ TTQ H HG +YD HH+ HH GY +
Sbjct: 27 HMIHHHDHHAANSAPPTHNNNNTTQPPPMPLHGNGHGNNYDHHHHQDPHHVGYNAI 82
>At1g14440.1 68414.m01712 zinc finger homeobox family protein /
ZF-HD homeobox family protein
Length = 312
Score = 31.1 bits (67), Expect = 0.86
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 11/56 (19%)
Query: 35 HTSHGHEHQGET---PAHHQILTTQ------HFE-HGGHYDLGHHKVQHH-GYTQV 79
H H H+H P H+ TTQ H HG +YD HH+ HH GY +
Sbjct: 27 HMIHHHDHHAANSAPPTHNNNNTTQPPPMPLHGNGHGNNYDHHHHQDPHHVGYNAI 82
>At2g04620.1 68415.m00470 cation efflux family protein potential
member of the cation diffusion facilitator (CDF) family,
or cation efflux (CE) family, see PMID:11500563
Length = 798
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/53 (30%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 21 HGHGHAVSSQSIVLHTSHGHEHQGETPAHHQILTTQHFEHGGHYDLGHHKVQH 73
H H H S H H H+ E HHQ + E +D HH H
Sbjct: 556 HSHSHQSHSHKNEEHHQHSDSHKHEE--HHQHSDSHKHEEHHEHDHHHHSHSH 606
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
Query: 21 HGHGHAVSSQSIVLHTSHGHE-HQGETPAHHQILTT-QHFEHGGHYDLGHHKVQHH 74
H H H S + H SH H+ H + HHQ + +H EH H D H +HH
Sbjct: 545 HHHAHGGSGCT---H-SHSHQSHSHKNEEHHQHSDSHKHEEHHQHSD-SHKHEEHH 595
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 16 KPQDGHGHGHAVSSQSIVLHT-SHGHEHQGETPAHHQILTTQHFEHGGHYDLGHHKVQHH 74
K ++ H H + + H+ SH HE E HH + +H E ++D H H+
Sbjct: 566 KNEEHHQHSDSHKHEEHHQHSDSHKHEEHHEHDHHHHSHSHKHEECNHNHDHEHQSHSHN 625
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 19 DGHGHGHAVSSQSIVLHTSHGHEHQGETPAHHQILTTQHFEHGGHYDLGHHKVQH 73
D H H H+ + + +H HEHQ + +H+ H H H K +H
Sbjct: 598 DHHHHSHSHKHEEC--NHNHDHEHQSHS-HNHEECNHNHDHHSDHQPEKSEKKEH 649
>At4g21450.2 68417.m03102 vesicle-associated membrane family
protein / VAMP family protein similar to VAP27
GI:6688926 [Nicotiana plumbaginifolia]
Length = 212
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 24 GHAVSSQSIVLHTSHGHEHQGETPAHHQI 52
G + SS S LH H H HQ HHQ+
Sbjct: 44 GASSSSTSSHLHNHHQHHHQHHHQHHHQL 72
>At4g21450.1 68417.m03103 vesicle-associated membrane family
protein / VAMP family protein similar to VAP27
GI:6688926 [Nicotiana plumbaginifolia]
Length = 295
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 24 GHAVSSQSIVLHTSHGHEHQGETPAHHQI 52
G + SS S LH H H HQ HHQ+
Sbjct: 44 GASSSSTSSHLHNHHQHHHQHHHQHHHQL 72
>At3g58810.2 68416.m06555 zinc transporter, putative similar to zinc
transporter 4; ZnT4 [Mus musculus]
gi|2582990|gb|AAB82593; similar to zinc transporter ZAT
[Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of
the cation diffusion facilitator (CDF) family, or cation
efflux (CE) family, PMID:11500563
Length = 393
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 11/44 (25%)
Query: 20 GHGHGHAVSSQSIVLHTSHGHEHQGETPAHHQILTTQHFEHGGH 63
GHGHGH+ + HGH H H I T+H GH
Sbjct: 201 GHGHGHSHDN-------GHGHSHD----HGHGIAATEHHHDSGH 233
>At3g58810.1 68416.m06554 zinc transporter, putative similar to zinc
transporter 4; ZnT4 [Mus musculus]
gi|2582990|gb|AAB82593; similar to zinc transporter ZAT
[Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of
the cation diffusion facilitator (CDF) family, or cation
efflux (CE) family, PMID:11500563
Length = 432
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 11/44 (25%)
Query: 20 GHGHGHAVSSQSIVLHTSHGHEHQGETPAHHQILTTQHFEHGGH 63
GHGHGH+ + HGH H H I T+H GH
Sbjct: 240 GHGHGHSHDN-------GHGHSHD----HGHGIAATEHHHDSGH 272
>At3g23790.1 68416.m02990 AMP-binding protein, putative similar to
AMP-binding protein GB:CAA96521 from [Brassica napus]
(Plant Mol. Biol. (1997) 33 (5), 911-922); contains Pfam
AMP-binding enzyme domain PF00501; identical to cDNA
acyl-CoA synthetase-like protein GI:20799732
Length = 722
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Query: 225 HPKYEFEYKIEDHHTG-----DKKSQHETRDGDVVKGYY 258
HP + E+KI DH TG K + R V+KGYY
Sbjct: 504 HPIKDTEFKIVDHETGTVLPPGSKGIVKVRGPPVMKGYY 542
>At4g29230.1 68417.m04181 no apical meristem (NAM) family protein
similar to NAM family proteins GP|12751304|,
GP|6223650|, GP|9758909 - Arabidopsis
thaliana,PIR2:T04621
Length = 498
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 18 QDGHGHGHAVSSQSIVLHTSHGHEHQGETPAHHQILTTQ 56
Q H H + S+ + H H H HQ + HH +Q
Sbjct: 342 QHRHRHQPSSSTSHHMAHDHHHHHHQQQQQRHHAFNISQ 380
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.133 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,490,794
Number of Sequences: 28952
Number of extensions: 187579
Number of successful extensions: 500
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 452
Number of HSP's gapped (non-prelim): 26
length of query: 279
length of database: 12,070,560
effective HSP length: 80
effective length of query: 199
effective length of database: 9,754,400
effective search space: 1941125600
effective search space used: 1941125600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
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