BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000253-TA|BGIBMGA000253-PA|IPR000618|Insect cuticle
protein
(119 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043436-1|AAC05661.1| 263|Anopheles gambiae putative pupal-spe... 77 2e-16
AF043443-1|AAC05668.1| 232|Anopheles gambiae putative pupal-spe... 75 7e-16
AF043442-1|AAC05667.1| 231|Anopheles gambiae putative pupal-spe... 75 7e-16
AF043441-1|AAC05666.1| 231|Anopheles gambiae putative pupal-spe... 75 7e-16
AF043440-1|AAC05665.1| 234|Anopheles gambiae putative pupal-spe... 75 7e-16
AF043439-1|AAC05664.1| 239|Anopheles gambiae putative pupal-spe... 75 7e-16
AF043438-1|AAC05663.1| 231|Anopheles gambiae putative pupal-spe... 75 7e-16
AF043437-1|AAC05662.1| 239|Anopheles gambiae putative pupal-spe... 75 7e-16
AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific cut... 75 7e-16
AF043434-1|AAC05659.1| 232|Anopheles gambiae putative pupal-spe... 75 7e-16
AF043433-3|AAC05658.1| 231|Anopheles gambiae putative pupal-spe... 75 7e-16
AF043433-2|AAC05657.1| 239|Anopheles gambiae putative pupal-spe... 75 7e-16
AF043433-1|AAC05656.1| 231|Anopheles gambiae putative pupal-spe... 74 2e-15
U50469-1|AAA93473.1| 160|Anopheles gambiae protein ( Anopheles ... 60 2e-11
AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical prot... 22 6.6
>AF043436-1|AAC05661.1| 263|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 263
Score = 76.6 bits (180), Expect = 2e-16
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 15 ATAQYGHDQSHGHAFSSQHISRHDGPA---QXXXXXXXXXXXXXXXXXXXYYAHPKYEFE 71
A A Y H + S+ I +H PA ++A YEF
Sbjct: 60 APAIYQHSAPAIYQHSAPAIYQHSAPAIYQHSAPAIVKTIAQPTIIKSVEHHAPANYEFS 119
Query: 72 YKVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDKHSG 119
Y V D HTGD KSQHE+R GD V G YSL DG R VDYH D H+G
Sbjct: 120 YSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTG 167
>AF043443-1|AAC05668.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 74.9 bits (176), Expect = 7e-16
Identities = 34/58 (58%), Positives = 38/58 (65%)
Query: 62 YYAHPKYEFEYKVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDKHSG 119
++A YEF Y V D HTGD KSQHE+R GD V G YSL DG R VDYH D H+G
Sbjct: 86 HHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTG 143
>AF043442-1|AAC05667.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 231
Score = 74.9 bits (176), Expect = 7e-16
Identities = 34/58 (58%), Positives = 38/58 (65%)
Query: 62 YYAHPKYEFEYKVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDKHSG 119
++A YEF Y V D HTGD KSQHE+R GD V G YSL DG R VDYH D H+G
Sbjct: 78 HHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTG 135
>AF043441-1|AAC05666.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 74.9 bits (176), Expect = 7e-16
Identities = 34/58 (58%), Positives = 38/58 (65%)
Query: 62 YYAHPKYEFEYKVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDKHSG 119
++A YEF Y V D HTGD KSQHE+R GD V G YSL DG R VDYH D H+G
Sbjct: 78 HHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTG 135
>AF043440-1|AAC05665.1| 234|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 234
Score = 74.9 bits (176), Expect = 7e-16
Identities = 34/58 (58%), Positives = 38/58 (65%)
Query: 62 YYAHPKYEFEYKVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDKHSG 119
++A YEF Y V D HTGD KSQHE+R GD V G YSL DG R VDYH D H+G
Sbjct: 78 HHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTG 135
>AF043439-1|AAC05664.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 74.9 bits (176), Expect = 7e-16
Identities = 34/58 (58%), Positives = 38/58 (65%)
Query: 62 YYAHPKYEFEYKVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDKHSG 119
++A YEF Y V D HTGD KSQHE+R GD V G YSL DG R VDYH D H+G
Sbjct: 86 HHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHHRIVDYHADHHTG 143
>AF043438-1|AAC05663.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 74.9 bits (176), Expect = 7e-16
Identities = 34/58 (58%), Positives = 38/58 (65%)
Query: 62 YYAHPKYEFEYKVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDKHSG 119
++A YEF Y V D HTGD KSQHE+R GD V G YSL DG R VDYH D H+G
Sbjct: 78 HHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTG 135
>AF043437-1|AAC05662.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 74.9 bits (176), Expect = 7e-16
Identities = 34/58 (58%), Positives = 38/58 (65%)
Query: 62 YYAHPKYEFEYKVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDKHSG 119
++A YEF Y V D HTGD KSQHE+R GD V G YSL DG R VDYH D H+G
Sbjct: 86 HHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTG 143
>AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific
cuticular protein CP2b protein.
Length = 231
Score = 74.9 bits (176), Expect = 7e-16
Identities = 34/58 (58%), Positives = 38/58 (65%)
Query: 62 YYAHPKYEFEYKVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDKHSG 119
++A YEF Y V D HTGD KSQHE+R GD V G YSL DG R VDYH D H+G
Sbjct: 78 HHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTG 135
>AF043434-1|AAC05659.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 74.9 bits (176), Expect = 7e-16
Identities = 34/58 (58%), Positives = 38/58 (65%)
Query: 62 YYAHPKYEFEYKVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDKHSG 119
++A YEF Y V D HTGD KSQHE+R GD V G YSL DG R VDYH D H+G
Sbjct: 86 HHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTG 143
>AF043433-3|AAC05658.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 74.9 bits (176), Expect = 7e-16
Identities = 34/58 (58%), Positives = 38/58 (65%)
Query: 62 YYAHPKYEFEYKVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDKHSG 119
++A YEF Y V D HTGD KSQHE+R GD V G YSL DG R VDYH D H+G
Sbjct: 78 HHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTG 135
>AF043433-2|AAC05657.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 239
Score = 74.9 bits (176), Expect = 7e-16
Identities = 34/58 (58%), Positives = 38/58 (65%)
Query: 62 YYAHPKYEFEYKVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDKHSG 119
++A YEF Y V D HTGD KSQHE+R GD V G YSL DG R VDYH D H+G
Sbjct: 86 HHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTG 143
>AF043433-1|AAC05656.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 73.7 bits (173), Expect = 2e-15
Identities = 33/58 (56%), Positives = 38/58 (65%)
Query: 62 YYAHPKYEFEYKVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDKHSG 119
++A YEF Y V D HTGD K+QHE+R GD V G YSL DG R VDYH D H+G
Sbjct: 78 HHAPANYEFSYSVHDEHTGDIKNQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTG 135
>U50469-1|AAA93473.1| 160|Anopheles gambiae protein ( Anopheles
gambiae putativecuticle protein mRNA, partial cds. ).
Length = 160
Score = 60.1 bits (139), Expect = 2e-11
Identities = 27/41 (65%), Positives = 31/41 (75%)
Query: 79 TGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDKHSG 119
TGD KSQ ESRDGDVV+G YS+ PDG+ R VDY D H+G
Sbjct: 34 TGDSKSQQESRDGDVVQGSYSVVDPDGTKRTVDYTADPHNG 74
>AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical protein
protein.
Length = 257
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 20 GHDQSHGHAFSSQHISRHDGP 40
GH +SH +++ H + H P
Sbjct: 225 GHMRSHHQHYTANHQNGHSAP 245
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.317 0.134 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,752
Number of Sequences: 2123
Number of extensions: 4453
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 15
length of query: 119
length of database: 516,269
effective HSP length: 57
effective length of query: 62
effective length of database: 395,258
effective search space: 24505996
effective search space used: 24505996
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 43 (21.4 bits)
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