GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000250-TA|BGIBMGA000250-PA|IPR000618|Insect cuticle
protein
         (144 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015725-1|AAH15725.2|  313|Homo sapiens BHD protein protein.          29   7.8  
AF517523-1|AAM94803.1|  579|Homo sapiens folliculin protein.           29   7.8  

>BC015725-1|AAH15725.2|  313|Homo sapiens BHD protein protein.
          Length = 313

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 5/53 (9%)

Query: 81  WESRDGDVVKGAYSLAE---PDGTTRIVEYTADKHNGFNAVVKRIGQAHHPQV 130
           W+SRD D+V+ A+ +     P G  RI+ Y++     +      +G + H Q+
Sbjct: 110 WKSRDVDLVQSAFEVLRTMLPVGCVRIIPYSSQYEEAYRC--NFLGLSPHVQI 160


>AF517523-1|AAM94803.1|  579|Homo sapiens folliculin protein.
          Length = 579

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 5/53 (9%)

Query: 81  WESRDGDVVKGAYSLAE---PDGTTRIVEYTADKHNGFNAVVKRIGQAHHPQV 130
           W+SRD D+V+ A+ +     P G  RI+ Y++     +      +G + H Q+
Sbjct: 376 WKSRDVDLVQSAFEVLRTMLPVGCVRIIPYSSQYEEAYRC--NFLGLSPHVQI 426


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.320    0.135    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,509,810
Number of Sequences: 224733
Number of extensions: 377688
Number of successful extensions: 511
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 511
Number of HSP's gapped (non-prelim): 2
length of query: 144
length of database: 73,234,838
effective HSP length: 83
effective length of query: 61
effective length of database: 54,581,999
effective search space: 3329501939
effective search space used: 3329501939
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)