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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000248-TA|BGIBMGA000248-PA|IPR000618|Insect cuticle
protein
         (137 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g45230.1 68416.m04881 hydroxyproline-rich glycoprotein family...    28   1.9  
At3g60850.1 68416.m06807 expressed protein                             27   5.9  
At1g69310.2 68414.m07949 WRKY family transcription factor contai...    27   5.9  
At1g69310.1 68414.m07948 WRKY family transcription factor contai...    27   5.9  
At3g12940.1 68416.m01612 expressed protein                             26   7.9  

>At3g45230.1 68416.m04881 hydroxyproline-rich glycoprotein family
          protein contains proline-rich extensin domains,
          INTERPRO:IPR002965; related to vegetative cell wall
          protein gp1 [Chlamydomonas reinhardtii]
          gi|12018147|gb|AAG45420
          Length = 175

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 8  LLATVACAHSRVLTYFRPTKHVDLQPSGTILHAEPHLGFEHHHISEDEPVDYYAYPKYEF 67
          ++ ++      +LT   P    DL  S  ++HA P      H+   + P++Y + P+ E 
Sbjct: 10 MMLSLVLVSGEILTKSSPAPSPDLADS-PLIHASPPSKLGSHNSPAESPIEYSSPPEPET 68

Query: 68 KY 69
          ++
Sbjct: 69 EH 70


>At3g60850.1 68416.m06807 expressed protein 
          Length = 648

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 12/38 (31%), Positives = 17/38 (44%)

Query: 28 HVDLQPSGTILHAEPHLGFEHHHISEDEPVDYYAYPKY 65
          H DL P+  IL   P     HHH    E    ++ P++
Sbjct: 13 HHDLDPTADILVQSPPSILHHHHDHNSEVDPAFSLPEF 50


>At1g69310.2 68414.m07949 WRKY family transcription factor contains
           Pfam profile: PF03106 WRKY DNA -binding domain
          Length = 287

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 33  PSGTILHA-EPHLGFEHHHISEDEPVDYY 60
           P G IL A +PH    HHH+    P  YY
Sbjct: 209 PRGGILTAHDPHSFTSHHHLPPPLPNPYY 237


>At1g69310.1 68414.m07948 WRKY family transcription factor contains
           Pfam profile: PF03106 WRKY DNA -binding domain
          Length = 287

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 33  PSGTILHA-EPHLGFEHHHISEDEPVDYY 60
           P G IL A +PH    HHH+    P  YY
Sbjct: 209 PRGGILTAHDPHSFTSHHHLPPPLPNPYY 237


>At3g12940.1 68416.m01612 expressed protein 
          Length = 474

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 5/64 (7%)

Query: 39  HAEPHL-GFEHHHISEDEPVDYYAYPKYEFKYGVNDFHTGDIKTHYETRDGDVVKGQYTV 97
           +A P   G +HH ++EDE +  Y+   ++    +  F   D K     RD   + GQ+ +
Sbjct: 182 YARPSFHGAQHHSLTEDEQLILYSDHDHQLDKSLISFVKSD-KAGLHIRD---MHGQWIL 237

Query: 98  VEPD 101
           V+ D
Sbjct: 238 VDVD 241


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.319    0.137    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,630,282
Number of Sequences: 28952
Number of extensions: 159121
Number of successful extensions: 310
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 309
Number of HSP's gapped (non-prelim): 5
length of query: 137
length of database: 12,070,560
effective HSP length: 74
effective length of query: 63
effective length of database: 9,928,112
effective search space: 625471056
effective search space used: 625471056
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)

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