BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000248-TA|BGIBMGA000248-PA|IPR000618|Insect cuticle protein (137 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g45230.1 68416.m04881 hydroxyproline-rich glycoprotein family... 28 1.9 At3g60850.1 68416.m06807 expressed protein 27 5.9 At1g69310.2 68414.m07949 WRKY family transcription factor contai... 27 5.9 At1g69310.1 68414.m07948 WRKY family transcription factor contai... 27 5.9 At3g12940.1 68416.m01612 expressed protein 26 7.9 >At3g45230.1 68416.m04881 hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965; related to vegetative cell wall protein gp1 [Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420 Length = 175 Score = 28.3 bits (60), Expect = 1.9 Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 8 LLATVACAHSRVLTYFRPTKHVDLQPSGTILHAEPHLGFEHHHISEDEPVDYYAYPKYEF 67 ++ ++ +LT P DL S ++HA P H+ + P++Y + P+ E Sbjct: 10 MMLSLVLVSGEILTKSSPAPSPDLADS-PLIHASPPSKLGSHNSPAESPIEYSSPPEPET 68 Query: 68 KY 69 ++ Sbjct: 69 EH 70 >At3g60850.1 68416.m06807 expressed protein Length = 648 Score = 26.6 bits (56), Expect = 5.9 Identities = 12/38 (31%), Positives = 17/38 (44%) Query: 28 HVDLQPSGTILHAEPHLGFEHHHISEDEPVDYYAYPKY 65 H DL P+ IL P HHH E ++ P++ Sbjct: 13 HHDLDPTADILVQSPPSILHHHHDHNSEVDPAFSLPEF 50 >At1g69310.2 68414.m07949 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain Length = 287 Score = 26.6 bits (56), Expect = 5.9 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%) Query: 33 PSGTILHA-EPHLGFEHHHISEDEPVDYY 60 P G IL A +PH HHH+ P YY Sbjct: 209 PRGGILTAHDPHSFTSHHHLPPPLPNPYY 237 >At1g69310.1 68414.m07948 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain Length = 287 Score = 26.6 bits (56), Expect = 5.9 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%) Query: 33 PSGTILHA-EPHLGFEHHHISEDEPVDYY 60 P G IL A +PH HHH+ P YY Sbjct: 209 PRGGILTAHDPHSFTSHHHLPPPLPNPYY 237 >At3g12940.1 68416.m01612 expressed protein Length = 474 Score = 26.2 bits (55), Expect = 7.9 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 5/64 (7%) Query: 39 HAEPHL-GFEHHHISEDEPVDYYAYPKYEFKYGVNDFHTGDIKTHYETRDGDVVKGQYTV 97 +A P G +HH ++EDE + Y+ ++ + F D K RD + GQ+ + Sbjct: 182 YARPSFHGAQHHSLTEDEQLILYSDHDHQLDKSLISFVKSD-KAGLHIRD---MHGQWIL 237 Query: 98 VEPD 101 V+ D Sbjct: 238 VDVD 241 Database: arabidopsis Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.319 0.137 0.425 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,630,282 Number of Sequences: 28952 Number of extensions: 159121 Number of successful extensions: 310 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 309 Number of HSP's gapped (non-prelim): 5 length of query: 137 length of database: 12,070,560 effective HSP length: 74 effective length of query: 63 effective length of database: 9,928,112 effective search space: 625471056 effective search space used: 625471056 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits) S2: 55 (26.2 bits)
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