BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000247-TA|BGIBMGA000247-PA|IPR000618|Insect cuticle
protein
(168 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043443-1|AAC05668.1| 232|Anopheles gambiae putative pupal-spe... 34 0.002
AF043442-1|AAC05667.1| 231|Anopheles gambiae putative pupal-spe... 34 0.002
AF043441-1|AAC05666.1| 231|Anopheles gambiae putative pupal-spe... 34 0.002
AF043440-1|AAC05665.1| 234|Anopheles gambiae putative pupal-spe... 34 0.002
AF043438-1|AAC05663.1| 231|Anopheles gambiae putative pupal-spe... 34 0.002
AF043437-1|AAC05662.1| 239|Anopheles gambiae putative pupal-spe... 34 0.002
AF043436-1|AAC05661.1| 263|Anopheles gambiae putative pupal-spe... 34 0.002
AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific cut... 34 0.002
AF043434-1|AAC05659.1| 232|Anopheles gambiae putative pupal-spe... 34 0.002
AF043433-3|AAC05658.1| 231|Anopheles gambiae putative pupal-spe... 34 0.002
AF043433-2|AAC05657.1| 239|Anopheles gambiae putative pupal-spe... 34 0.002
AF043433-1|AAC05656.1| 231|Anopheles gambiae putative pupal-spe... 34 0.002
AF043439-1|AAC05664.1| 239|Anopheles gambiae putative pupal-spe... 34 0.003
U50469-1|AAA93473.1| 160|Anopheles gambiae protein ( Anopheles ... 27 0.30
U89799-1|AAD03792.1| 332|Anopheles gambiae Tc1-like transposase... 25 1.6
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 24 2.8
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 24 2.8
AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein. 23 6.5
AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein. 23 6.5
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 22 8.6
AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein p... 22 8.6
>AF043443-1|AAC05668.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 34.3 bits (75), Expect = 0.002
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 45 PGTYSFGYDILDPNTGNSQYRNEERYPNGTVTGSYGYVDAAGKPQRFRYVAD 96
P Y F Y + D +TG+ + ++E R+ V G Y +D+ G + Y AD
Sbjct: 89 PANYEFSYSVHDEHTGDIKSQHETRH-GDEVHGQYSLLDSDGHQRIVDYHAD 139
>AF043442-1|AAC05667.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 231
Score = 34.3 bits (75), Expect = 0.002
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 45 PGTYSFGYDILDPNTGNSQYRNEERYPNGTVTGSYGYVDAAGKPQRFRYVAD 96
P Y F Y + D +TG+ + ++E R+ V G Y +D+ G + Y AD
Sbjct: 81 PANYEFSYSVHDEHTGDIKSQHETRH-GDEVHGQYSLLDSDGHQRIVDYHAD 131
>AF043441-1|AAC05666.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 34.3 bits (75), Expect = 0.002
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 45 PGTYSFGYDILDPNTGNSQYRNEERYPNGTVTGSYGYVDAAGKPQRFRYVAD 96
P Y F Y + D +TG+ + ++E R+ V G Y +D+ G + Y AD
Sbjct: 81 PANYEFSYSVHDEHTGDIKSQHETRH-GDEVHGQYSLLDSDGHQRIVDYHAD 131
>AF043440-1|AAC05665.1| 234|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 234
Score = 34.3 bits (75), Expect = 0.002
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 45 PGTYSFGYDILDPNTGNSQYRNEERYPNGTVTGSYGYVDAAGKPQRFRYVAD 96
P Y F Y + D +TG+ + ++E R+ V G Y +D+ G + Y AD
Sbjct: 81 PANYEFSYSVHDEHTGDIKSQHETRH-GDEVHGQYSLLDSDGHQRIVDYHAD 131
>AF043438-1|AAC05663.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 34.3 bits (75), Expect = 0.002
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 45 PGTYSFGYDILDPNTGNSQYRNEERYPNGTVTGSYGYVDAAGKPQRFRYVAD 96
P Y F Y + D +TG+ + ++E R+ V G Y +D+ G + Y AD
Sbjct: 81 PANYEFSYSVHDEHTGDIKSQHETRH-GDEVHGQYSLLDSDGHQRIVDYHAD 131
>AF043437-1|AAC05662.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 34.3 bits (75), Expect = 0.002
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 45 PGTYSFGYDILDPNTGNSQYRNEERYPNGTVTGSYGYVDAAGKPQRFRYVAD 96
P Y F Y + D +TG+ + ++E R+ V G Y +D+ G + Y AD
Sbjct: 89 PANYEFSYSVHDEHTGDIKSQHETRH-GDEVHGQYSLLDSDGHQRIVDYHAD 139
>AF043436-1|AAC05661.1| 263|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 263
Score = 34.3 bits (75), Expect = 0.002
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 45 PGTYSFGYDILDPNTGNSQYRNEERYPNGTVTGSYGYVDAAGKPQRFRYVAD 96
P Y F Y + D +TG+ + ++E R+ V G Y +D+ G + Y AD
Sbjct: 113 PANYEFSYSVHDEHTGDIKSQHETRH-GDEVHGQYSLLDSDGHQRIVDYHAD 163
>AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific
cuticular protein CP2b protein.
Length = 231
Score = 34.3 bits (75), Expect = 0.002
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 45 PGTYSFGYDILDPNTGNSQYRNEERYPNGTVTGSYGYVDAAGKPQRFRYVAD 96
P Y F Y + D +TG+ + ++E R+ V G Y +D+ G + Y AD
Sbjct: 81 PANYEFSYSVHDEHTGDIKSQHETRH-GDEVHGQYSLLDSDGHQRIVDYHAD 131
>AF043434-1|AAC05659.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 34.3 bits (75), Expect = 0.002
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 45 PGTYSFGYDILDPNTGNSQYRNEERYPNGTVTGSYGYVDAAGKPQRFRYVAD 96
P Y F Y + D +TG+ + ++E R+ V G Y +D+ G + Y AD
Sbjct: 89 PANYEFSYSVHDEHTGDIKSQHETRH-GDEVHGQYSLLDSDGHQRIVDYHAD 139
>AF043433-3|AAC05658.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 34.3 bits (75), Expect = 0.002
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 45 PGTYSFGYDILDPNTGNSQYRNEERYPNGTVTGSYGYVDAAGKPQRFRYVAD 96
P Y F Y + D +TG+ + ++E R+ V G Y +D+ G + Y AD
Sbjct: 81 PANYEFSYSVHDEHTGDIKSQHETRH-GDEVHGQYSLLDSDGHQRIVDYHAD 131
>AF043433-2|AAC05657.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 239
Score = 34.3 bits (75), Expect = 0.002
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 45 PGTYSFGYDILDPNTGNSQYRNEERYPNGTVTGSYGYVDAAGKPQRFRYVAD 96
P Y F Y + D +TG+ + ++E R+ V G Y +D+ G + Y AD
Sbjct: 89 PANYEFSYSVHDEHTGDIKSQHETRH-GDEVHGQYSLLDSDGHQRIVDYHAD 139
>AF043433-1|AAC05656.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 34.3 bits (75), Expect = 0.002
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 45 PGTYSFGYDILDPNTGNSQYRNEERYPNGTVTGSYGYVDAAGKPQRFRYVAD 96
P Y F Y + D +TG+ + ++E R+ V G Y +D+ G + Y AD
Sbjct: 81 PANYEFSYSVHDEHTGDIKNQHETRH-GDEVHGQYSLLDSDGHQRIVDYHAD 131
>AF043439-1|AAC05664.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 33.9 bits (74), Expect = 0.003
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 45 PGTYSFGYDILDPNTGNSQYRNEERYPNGTVTGSYGYVDAAGKPQRFRYVAD 96
P Y F Y + D +TG+ + ++E R+ V G Y +D+ G + Y AD
Sbjct: 89 PANYEFSYSVHDEHTGDIKSQHETRH-GDEVHGQYSLLDSDGHHRIVDYHAD 139
>U50469-1|AAA93473.1| 160|Anopheles gambiae protein ( Anopheles
gambiae putativecuticle protein mRNA, partial cds. ).
Length = 160
Score = 27.1 bits (57), Expect = 0.30
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 59 TGNSQYRNEERYPNGTVTGSYGYVDAAGKPQRFRYVAD 96
TG+S+ + E R V GSY VD G + Y AD
Sbjct: 34 TGDSKSQQESR-DGDVVQGSYSVVDPDGTKRTVDYTAD 70
>U89799-1|AAD03792.1| 332|Anopheles gambiae Tc1-like transposase
protein.
Length = 332
Score = 24.6 bits (51), Expect = 1.6
Identities = 12/50 (24%), Positives = 19/50 (38%)
Query: 113 QAQTPPVRMPGDSATESSITWSRPKKKNKRKPVAEMMKSEENININSLRQ 162
Q + P R D T W R + R + +M K + + N+ Q
Sbjct: 280 QLKNQPARSADDLWTRCKFMWERIDRSESRNLIGDMAKRCQEVIANNGHQ 329
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 23.8 bits (49), Expect = 2.8
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 115 QTPPVRMPGDSATESSITWSRPKKKNKRKP 144
++PP R S +S SRP K KR P
Sbjct: 272 RSPPARRRSRSTRPTSWPRSRPTSKPKRLP 301
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 23.8 bits (49), Expect = 2.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 123 GDSATESSITWSRPKKKNKRKP 144
G E+ +WS +KN+RKP
Sbjct: 205 GPEMNETKGSWSTVVRKNRRKP 226
>AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein.
Length = 259
Score = 22.6 bits (46), Expect = 6.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 94 VADEKGYRIFQEISHLPLVQAQTPPVRMPGDSAT 127
VA E + Q+IS+ P Q+ T P+R + +T
Sbjct: 117 VAAELKNMVLQDISNQPKQQSTTRPLRKCRNKST 150
>AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein.
Length = 260
Score = 22.6 bits (46), Expect = 6.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 94 VADEKGYRIFQEISHLPLVQAQTPPVRMPGDSAT 127
VA E + Q+IS+ P Q+ T P+R + +T
Sbjct: 118 VAAELKNMVLQDISNQPKQQSTTRPLRKCRNKST 151
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
anion exchanger protein.
Length = 1102
Score = 22.2 bits (45), Expect = 8.6
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 117 PPVRMPGDSATESSITWSRPKKKNKRKPVAEMMKSE 152
P +R+ +A S RP +KN ++ + E ++ +
Sbjct: 448 PSIRIEPPAAIPSQEVRKRPPEKNPKEEIDEELEEQ 483
>AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein
protein.
Length = 400
Score = 22.2 bits (45), Expect = 8.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 122 PGDSATESSITWSRPKKKNKRKPVAEMMKSEENINI 157
P S +S + KK++ KP A +++ ENI++
Sbjct: 148 PKSSGGQSKQPKKKKKKRSLPKPEAVVIEKCENIDL 183
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.314 0.131 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,104
Number of Sequences: 2123
Number of extensions: 8292
Number of successful extensions: 26
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 21
length of query: 168
length of database: 516,269
effective HSP length: 60
effective length of query: 108
effective length of database: 388,889
effective search space: 42000012
effective search space used: 42000012
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 45 (22.2 bits)
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