GeneModel BLAST Result against arabidopsis

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000247-TA|BGIBMGA000247-PA|IPR000618|Insect cuticle
protein
         (168 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g36420.1 68417.m05174 ribosomal protein L12 family protein          31   0.53 
At2g17150.1 68415.m01980 RWP-RK domain-containing protein simila...    29   1.6  
At1g12490.1 68414.m01445 F-box family protein-related contains w...    28   3.7  
At5g03880.1 68418.m00362 expressed protein                             27   6.5  
At3g46980.2 68416.m05102 transporter-related low similarity to b...    27   6.5  
At3g46980.1 68416.m05101 transporter-related low similarity to b...    27   6.5  
At2g27150.1 68415.m03263 aldehyde oxidase 3 (AAO3) identical to ...    27   6.5  
At5g02310.1 68418.m00154 eceriferum3 protein, putative similar t...    27   8.6  
At3g57070.1 68416.m06354 glutaredoxin family protein contains Pf...    27   8.6  
At3g57060.1 68416.m06353 non-SMC condensin subunit, XCAP-D2/Cnd1...    27   8.6  
At1g28430.1 68414.m03495 cytochrome P450, putative similar to cy...    27   8.6  

>At4g36420.1 68417.m05174 ribosomal protein L12 family protein
          Length = 179

 Score = 30.7 bits (66), Expect = 0.53
 Identities = 14/51 (27%), Positives = 29/51 (56%)

Query: 106 ISHLPLVQAQTPPVRMPGDSATESSITWSRPKKKNKRKPVAEMMKSEENIN 156
           IS LP++ A  P + +PG  A++S+    + KKK  +     M+++ + ++
Sbjct: 73  ISELPVMAAMMPGMSLPGSGASKSAGGEGKEKKKEAKTAFDVMLQAYDAVS 123


>At2g17150.1 68415.m01980 RWP-RK domain-containing protein similar
           to nodule inception protein [Lotus japonicus]
           GI:6448579; contains Pfam profile: PF02042 RWP-RK domain
          Length = 909

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 17/52 (32%), Positives = 27/52 (51%)

Query: 111 LVQAQTPPVRMPGDSATESSITWSRPKKKNKRKPVAEMMKSEENININSLRQ 162
           L QA TP +R+    +TES+ T       ++R    +  K+E+ I +  LRQ
Sbjct: 565 LQQASTPGLRVDIGPSTESASTGGGNMLSSRRPGEKKRAKTEKTIGLEVLRQ 616


>At1g12490.1 68414.m01445 F-box family protein-related contains weak
           hit to TIGRFAM TIGR01640 : F-box protein interaction
           domain
          Length = 352

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 16/64 (25%), Positives = 29/64 (45%)

Query: 12  SWLSQASSAPRKPRLTVAEDDMPIYYVRNVNGNPGTYSFGYDILDPNTGNSQYRNEERYP 71
           +W   + +AP +    +   D+     R V+  P T    +DI+  N GN    +E+ +P
Sbjct: 198 AWRYVSPTAPYREETKILSFDLHTETFRVVSKAPFTNVKAFDIVMCNLGNRLCVSEKNWP 257

Query: 72  NGTV 75
           N  +
Sbjct: 258 NQVI 261


>At5g03880.1 68418.m00362 expressed protein
          Length = 339

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 18/71 (25%)

Query: 22  RKPRLTVAEDDMPIYYVRNVNGNP----------GTYSFGYDILDPNTGNSQYRNE---- 67
           RK R  VA  D+ I Y     G+P          G   F Y ++DPNTG S Y ++    
Sbjct: 155 RKVREMVAVLDLDILYYPCPRGSPNFRPKVKQMGGKQQFPY-MVDPNTGVSMYESDGIIK 213

Query: 68  ---ERYPNGTV 75
              E+Y +GTV
Sbjct: 214 YLSEKYGDGTV 224


>At3g46980.2 68416.m05102 transporter-related low similarity to
           brain specific Na+-dependent inorganic phosphate
           cotransporter from [Rattus norvegicus] GI:507415, [Homo
           sapiens] GI:7328925, vesicular glutamate transporter 3
           from [Rattus norvegicus] GI:21685382; contains Pfam
           profile PF00083: major facilitator superfamily protein
          Length = 469

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)

Query: 6   GFSVALSWLSQASSAP-RKPRLTVAE 30
           GF   L WLS  SSAP R P++T +E
Sbjct: 279 GFLWLLVWLSATSSAPDRHPQITKSE 304


>At3g46980.1 68416.m05101 transporter-related low similarity to
           brain specific Na+-dependent inorganic phosphate
           cotransporter from [Rattus norvegicus] GI:507415, [Homo
           sapiens] GI:7328925, vesicular glutamate transporter 3
           from [Rattus norvegicus] GI:21685382; contains Pfam
           profile PF00083: major facilitator superfamily protein
          Length = 533

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)

Query: 6   GFSVALSWLSQASSAP-RKPRLTVAE 30
           GF   L WLS  SSAP R P++T +E
Sbjct: 279 GFLWLLVWLSATSSAPDRHPQITKSE 304


>At2g27150.1 68415.m03263 aldehyde oxidase 3 (AAO3) identical to
           GP:3172044:gnl:PID:d1029570:AB010080
          Length = 1332

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 8/45 (17%)

Query: 58  NTGNSQYRNEERYPNGTVTGSYGYVDAAGKPQRFRYVADEKGYRI 102
           NTG   Y++EER+          Y+D +  P+      DEKG  I
Sbjct: 254 NTGTGYYKDEERFDR--------YIDISNIPEMSMIKKDEKGIEI 290


>At5g02310.1 68418.m00154 eceriferum3 protein, putative similar to
            eceriferum3 GI:1669655 from [Arabidopsis thaliana]
          Length = 2006

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 44   NPGTYSFGYDILDPNTGNSQYRNEERYPNGT-VTGSYGYVDAAGK 87
            +P   +FG + +D   G   Y NEERY   T + GS+G +D + K
Sbjct: 1951 SPYLDTFGEEDIDMIRGKRLYLNEERYAALTYLVGSHG-LDRSSK 1994


>At3g57070.1 68416.m06354 glutaredoxin family protein contains Pfam
           profile PF00462: Glutaredoxin
          Length = 417

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 15  SQASSAPRKPRLTVAEDDMPIYYVRNVNGNPGTY 48
           SQ  S+P KPRL   ED + +Y+   + G   TY
Sbjct: 252 SQLISSPAKPRLPGTEDKIVLYFT-TLRGIRKTY 284


>At3g57060.1 68416.m06353 non-SMC condensin subunit, XCAP-D2/Cnd1
           family protein similar to 13S condensin XCAP-D2 subunit
           [Xenopus laevis] GI:3764087; contains Pfam profile
           PF04594: Non-SMC condensin subunit, XCAP-D2/Cnd1
          Length = 1439

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 128 ESSITWSRPKKKNKRKPVAEMMKSEENI 155
           ES I   R +K  K KP AE   +EEN+
Sbjct: 850 ESCIQKIRRQKTKKDKPAAESQNTEENL 877


>At1g28430.1 68414.m03495 cytochrome P450, putative similar to
           cytochrome P450 (CYP93A1) GI:1435059 from [Glycine max]
          Length = 521

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 14/36 (38%), Positives = 16/36 (44%)

Query: 49  SFGYDILDPNTGNSQYRNEERYPNGTVTGSYGYVDA 84
           S  YDI   N  N  YR +       V GS+GY  A
Sbjct: 92  STAYDIFKTNDINVSYRGDVAIDECIVFGSFGYFRA 127


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.314    0.131    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,437,106
Number of Sequences: 28952
Number of extensions: 194988
Number of successful extensions: 450
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 445
Number of HSP's gapped (non-prelim): 11
length of query: 168
length of database: 12,070,560
effective HSP length: 76
effective length of query: 92
effective length of database: 9,870,208
effective search space: 908059136
effective search space used: 908059136
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 56 (26.6 bits)