GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000246-TA|BGIBMGA000246-PA|IPR000618|Insect cuticle
protein
         (157 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       26   0.13 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   4.9  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   6.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   6.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   6.4  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 26.2 bits (55), Expect = 0.13
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)

Query: 82  KSQQEQRDGD-VVKGSYSLVE-PDGTTRTVHYTAD 114
           K + E+R  D  + G Y +V   DG+ R V YTAD
Sbjct: 204 KYRVEERTSDGFIVGEYGVVSHDDGSLRGVRYTAD 238


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 152 PHYGFH 157
           PHYGFH
Sbjct: 446 PHYGFH 451


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 2   LILLAFVGTSLAAPIDYFHGGVSYA 26
           L+L      S +   DYF G +SY+
Sbjct: 176 LVLALECNNSTSEGFDYFFGKMSYS 200


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 2   LILLAFVGTSLAAPIDYFHGGVSYA 26
           L+L      S +   DYF G +SY+
Sbjct: 176 LVLALECNNSTSEGFDYFFGKMSYS 200


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 2   LILLAFVGTSLAAPIDYFHGGVSYA 26
           L+L      S +   DYF G +SY+
Sbjct: 176 LVLALECNNSTSEGFDYFFGKMSYS 200


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.136    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,321
Number of Sequences: 317
Number of extensions: 733
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 157
length of database: 114,650
effective HSP length: 52
effective length of query: 105
effective length of database: 98,166
effective search space: 10307430
effective search space used: 10307430
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
S2: 40 (20.2 bits)