Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000244-TA|BGIBMGA000244-PA|IPR000061|SWAP/Surp,
IPR000467|D111/G-patch, IPR006569|Regulation of nuclear pre-mRNA
protein
(816 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 24 3.6
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 24 4.8
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 23 6.3
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 23 6.3
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 23 8.4
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 23 8.4
DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11 pro... 23 8.4
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 23 8.4
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 23 8.4
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 23 8.4
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 24.2 bits (50), Expect = 3.6
Identities = 21/82 (25%), Positives = 29/82 (35%), Gaps = 5/82 (6%)
Query: 414 PQMGGYDQNFNANSNSQQYGSESGDNYPTN--NSISGNENSYDSQIFEQIAKQKKENIED 471
P G + N + QYG + NY +N ++ G N Y Q+ I
Sbjct: 44 PPGGDFFGNHHIQQQQLQYGYHNHQNYNSNVLSNGYGYGNYYHPQLHSHHGPPIHHQIRP 103
Query: 472 P---DLSNLPNVNFSVPPPGFK 490
P D + N VP FK
Sbjct: 104 PILHDTQPMCNPQLQVPRTFFK 125
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 23.8 bits (49), Expect = 4.8
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 455 SQIFEQIAKQKKENIEDPDLSNLPNVNFSVPP 486
SQ+ + + K+ P L N+P+ V P
Sbjct: 362 SQLLRHVEESDKQRTHQPFLLNIPSEGIKVEP 393
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 23.4 bits (48), Expect = 6.3
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 403 FHNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGDNYPTNNSISGNENS 452
F N+N + + P + + N NS Q Y SES N + N +S
Sbjct: 455 FPNTNNAIMTPPASVQTESSDNYNSFHQFYSSESSQNQVAPTGENSNSSS 504
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 23.4 bits (48), Expect = 6.3
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 403 FHNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGDNYPTNNSISGNENS 452
F N+N + + P + + N NS Q Y SES N + N +S
Sbjct: 403 FPNTNNAIMTPPASVQTESSDNYNSFHQFYSSESSQNQVAPTGENSNSSS 452
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 23.0 bits (47), Expect = 8.4
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 424 NANSNSQQYGSESGDNYPTNNSISGNENSYDSQIFEQIAK 463
+ANS+ Q G + + N+ +E + D QI+ + K
Sbjct: 177 DANSDEQDDGDDGQGSSTNNDEDDDDEETGDRQIYPWMRK 216
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 23.0 bits (47), Expect = 8.4
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 424 NANSNSQQYGSESGDNYPTNNSISGNENSYDSQIFEQIAK 463
+ANS+ Q G + + N+ +E + D QI+ + K
Sbjct: 177 DANSDEQDDGDDGQGSSTNNDEDDDDEETGDRQIYPWMRK 216
>DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11
protein.
Length = 366
Score = 23.0 bits (47), Expect = 8.4
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 216 GKGWILQHATSHDAGKVISQHLLRKVTQT 244
G W LQ ++HD G + + TQ+
Sbjct: 250 GHSWYLQSTSNHDVGAPATTGIAGPFTQS 278
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 23.0 bits (47), Expect = 8.4
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 254 IIYLVNDVLHHCARKNAEDLKKNLENV 280
++Y++ + HH RK + ++ L NV
Sbjct: 325 LLYIICNEGHHATRKMGPEFRERLLNV 351
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 23.0 bits (47), Expect = 8.4
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 254 IIYLVNDVLHHCARKNAEDLKKNLENV 280
++Y++ + HH RK + ++ L NV
Sbjct: 325 LLYIICNEGHHATRKMGPEFRERLLNV 351
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 23.0 bits (47), Expect = 8.4
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 424 NANSNSQQYGSESGDNYPTNNSISGNENSYDSQIFEQIAK 463
+ANS+ Q G + + N+ +E + D QI+ + K
Sbjct: 177 DANSDEQDDGDDGQGSSTNNDEDDDDEETGDRQIYPWMRK 216
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.312 0.129 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,419
Number of Sequences: 317
Number of extensions: 7048
Number of successful extensions: 26
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 13
length of query: 816
length of database: 114,650
effective HSP length: 62
effective length of query: 754
effective length of database: 94,996
effective search space: 71626984
effective search space used: 71626984
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 47 (23.0 bits)
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