Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000244-TA|BGIBMGA000244-PA|IPR000061|SWAP/Surp,
IPR000467|D111/G-patch, IPR006569|Regulation of nuclear pre-mRNA
protein
(816 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909 71 5e-12
09_02_0221 + 5962606-5963197,5963711-5963837,5963994-5964100,596... 58 3e-08
02_02_0240 + 8196140-8198248,8198381-8198650 52 2e-06
04_01_0082 + 897026-897028,897101-897350,898454-898608,898686-89... 48 4e-05
06_03_0097 - 16607936-16608712,16610114-16610320,16611220-166113... 45 3e-04
02_01_0500 - 3623837-3624019,3624591-3624778,3625209-3626147,362... 42 0.002
02_01_0598 + 4440018-4440070,4440627-4440693,4440794-4440926,444... 37 0.056
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 37 0.074
11_01_0374 - 2843405-2843508,2844134-2844239,2844327-2844409,284... 34 0.40
08_01_0527 + 4580599-4580818,4580933-4581806,4581891-4581955,458... 33 0.92
01_01_0489 + 3608720-3608811,3609326-3609431,3609518-3609581,360... 33 1.2
02_05_1041 - 33713561-33714564,33714844-33714904,33715640-337159... 32 1.6
02_01_0642 - 4803464-4805665,4806231-4806320 32 1.6
06_03_0610 - 22715637-22716797 31 2.8
04_01_0301 + 4016588-4016627,4016715-4018837 31 2.8
04_03_0941 - 20950190-20951088,20952436-20952478,20952580-209526... 31 3.7
03_03_0248 + 15819264-15819460,15820691-15820729,15820797-158209... 31 3.7
02_05_0036 - 25292150-25293124,25294021-25294206,25294704-252948... 31 3.7
08_02_0036 - 11455762-11455802,11455996-11456104,11456207-114568... 31 4.9
07_03_1107 - 24024387-24024497,24025799-24026410 31 4.9
06_01_0920 + 7098007-7098065,7098538-7099345 31 4.9
05_04_0022 - 17217626-17217643,17217740-17217856,17217987-172181... 31 4.9
03_02_0998 - 13097675-13098079,13098307-13098441,13098522-130987... 31 4.9
02_05_0998 + 33391021-33391266,33391354-33391502,33391600-333916... 31 4.9
01_05_0299 - 20595919-20595963,20596111-20596221,20596901-205969... 31 4.9
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 30 6.5
08_02_0526 + 18184146-18184168,18184247-18184438,18184846-181849... 30 6.5
08_01_0133 + 1062365-1063057,1063210-1063318,1063914-1064005,106... 30 6.5
07_03_1180 - 24601631-24602142,24602518-24602581,24602811-246028... 30 6.5
07_03_1461 - 26700613-26700621,26700784-26700851,26701778-267019... 30 8.5
05_01_0137 + 917533-917814,918080-918352 30 8.5
04_01_0347 - 4546566-4546604,4546710-4546748,4546834-4547059,454... 30 8.5
>06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909
Length = 627
Score = 70.5 bits (165), Expect = 5e-12
Identities = 26/55 (47%), Positives = 43/55 (78%)
Query: 6 PPQDQDLRNIIDKLAQFVARNGPEFEKMTKNKQKNNPKFSFLYGGEYFNYYQYKV 60
PP D +L+ IDK+ +++A+NGPEFE + ++KQ +NP ++F++GGE YY+YK+
Sbjct: 102 PPSDPELQKRIDKVVEYIAKNGPEFEVVIRDKQHDNPDYAFIFGGEGHAYYRYKL 156
Score = 39.5 bits (88), Expect = 0.011
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 17/133 (12%)
Query: 195 SELDNILQPIIDSCTKDSISSGKGWILQHATSHDAGKVISQHLLRKVTQTGAAFTQKLHI 254
+EL ++L + + TK+SI K W +Q + A +++ L +V + Q LHI
Sbjct: 232 AELHDVLTNL--NGTKESIKGAKTWFMQRSPFAPA---LAEALKDRVFALEDSERQ-LHI 285
Query: 255 IYLVNDVLHHC--ARKNAEDL-------KKNLENVVVPMFCNASIAVTEEQEAKLNKLLR 305
I+LVND+L R N+ DL K L +++ ++ N ++ + +L K+L+
Sbjct: 286 IFLVNDILFESLQRRTNSRDLDNEALAFKFVLGSMLARIYNNPQ--SKDDNQIRLEKILQ 343
Query: 306 LWESKSNYFETAV 318
W SK Y + +
Sbjct: 344 FWGSKEVYDQETI 356
>09_02_0221 +
5962606-5963197,5963711-5963837,5963994-5964100,
5964185-5964328,5964700-5964822,5964921-5965103,
5965540-5965718,5965797-5965823
Length = 493
Score = 58.0 bits (134), Expect = 3e-08
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 4 PQPPQDQDLRNIIDKLAQFVARNGPEFEKMTKNKQKNNPKFSFLYGGEY--FNYYQYKVT 61
P PP D ++ + DKLA FVA+NG +FE +T+ + + F FL+ + YY++++
Sbjct: 199 PSPPNDMTVKQVADKLANFVAKNGRQFENVTRQRNPGDTPFKFLFDKNCSDYKYYEFRLA 258
Query: 62 TEQAIL 67
E+ +L
Sbjct: 259 EEEMLL 264
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 738 IDSTNKGHQMLQKMGWSAG-GLGASGQGIAEPISGGFVRDRQDQYKGVG-------VSLN 789
I + N GH++L KMGW G GLG+ G A+PI G D + + GVG S +
Sbjct: 408 IQADNIGHKLLSKMGWREGEGLGSERSGRADPIMAG---DVKKDHLGVGAVQPGEVTSED 464
Query: 790 DPYENFRK 797
D YE ++K
Sbjct: 465 DIYEQYKK 472
>02_02_0240 + 8196140-8198248,8198381-8198650
Length = 792
Score = 51.6 bits (118), Expect = 2e-06
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 11 DLRNIIDKLAQFVARNGPEFEKMTKNKQKNNPKFSFLYGGE-YFNYYQYKVT 61
D+R II+K A FV++NGPEFE+ + N KF+FL + Y YYQ++V+
Sbjct: 54 DIRVIIEKTATFVSKNGPEFERRIISHNAGNAKFNFLQPSDPYHAYYQHRVS 105
Score = 35.5 bits (78), Expect = 0.17
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 1 MELPQPPQDQDLRNIIDKLAQFVARNGPEFEKMTKNKQKNNPKFSFL 47
+ LP+ ++L +II AQFVARNG F ++ NP+F F+
Sbjct: 175 VHLPEGITGEEL-DIIKLTAQFVARNGKSFLTSLAQRESTNPQFHFI 220
>04_01_0082 +
897026-897028,897101-897350,898454-898608,898686-898967,
899078-899160,899335-899485,899896-899952,900279-900479
Length = 393
Score = 47.6 bits (108), Expect = 4e-05
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 738 IDSTNKGHQMLQKMGWSAGGLGASGQGIAEPISGGFVRDRQDQYKGVGVSLNDPY 792
+ S+N G ++LQKMGW GLG + QGI EPI G +RD + GVG D +
Sbjct: 59 LTSSNVGFRLLQKMGWKGKGLGKNEQGITEPIKAG-IRDAK---LGVGKQEQDDF 109
>06_03_0097 -
16607936-16608712,16610114-16610320,16611220-16611336,
16611409-16611690,16611811-16612294,16612791-16612929,
16613138-16613243,16613396-16613562,16613632-16613707,
16614173-16614321,16614813-16614874,16615232-16615335,
16616856-16616950,16617046-16617136,16617785-16617922
Length = 997
Score = 44.8 bits (101), Expect = 3e-04
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 ELPQPPQDQDLRNIIDKLAQFVARNGPEFEKMTKNKQKNNPKFSFLYGGEYFNYYQYKV 60
E+P P +D LR +I+ A VAR G E K K K N +F+FL G+ +YY K+
Sbjct: 409 EVPAP-EDTSLRLLIEGCAAMVARCGKHIEDFYKEKSKTNTQFNFLNEGDGCSYYARKL 466
>02_01_0500 -
3623837-3624019,3624591-3624778,3625209-3626147,
3626311-3626479,3626701-3626871,3626948-3627016,
3627094-3627201,3627844-3627997,3628659-3628738,
3628822-3628914,3628951-3629073,3629165-3629915,
3630123-3630163,3630338-3630385
Length = 1038
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 733 TTSGGIDSTNKGHQMLQKMGWSAG-GLGASGQGIAEPI 769
T ID +N G+++L+ MGW G GLG +G GI EP+
Sbjct: 954 TADRAIDESNVGNRILRNMGWQEGLGLGKTGSGIKEPV 991
>02_01_0598 +
4440018-4440070,4440627-4440693,4440794-4440926,
4441075-4441120,4442470-4442521,4442601-4442753,
4443338-4443457,4443549-4443714,4443822-4443934,
4444049-4444120,4444992-4445213,4445270-4445317,
4445639-4445697,4445809-4445887,4445982-4446119,
4446327-4446551,4446643-4447430,4447548-4447723,
4447911-4448169,4448646-4448707,4451055-4451212,
4451618-4451743,4452197-4452260,4452386-4452494,
4452607-4452760,4453055-4453178,4453257-4453333,
4453442-4453494,4453673-4453727,4453833-4454021
Length = 1379
Score = 37.1 bits (82), Expect = 0.056
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 6 PPQDQDLRNIIDKLAQFVARNGPEFEKMTKNKQKNNPKFSFLYG--GEYFNYYQYKV 60
PP D +R++ID +A V G FE+ + + N FSFL+ + YY +++
Sbjct: 338 PPDDAHVRHVIDTMALHVLDGGCAFEQAVMERGRGNSLFSFLFDLKSKEHTYYVWRL 394
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 36.7 bits (81), Expect = 0.074
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 7 PQDQDLRNIIDKLAQFVARNGPEFEKMTKNKQKNNPKFSFLYGGEYF-NYYQYKVTTEQA 65
P + + II + A FV+ +G + E + + KQ +NP F FL + +Y++Y V Q
Sbjct: 152 PPSEKVHQIIARTALFVSEHGGQSEIVLRVKQGSNPTFGFLMPDHHLHSYFRYLVDHPQL 211
Query: 66 I 66
+
Sbjct: 212 L 212
Score = 35.1 bits (77), Expect = 0.23
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 12 LRNIIDKLAQFVARNGPEFEKMTKNKQKNNPKFSFLYGGEYFNYYQYKVTTE 63
L+ ++K+ +F+ RNG EFE + + +F FL ++ Y K+ E
Sbjct: 357 LKRTMEKIVEFIIRNGKEFEGKLIEQDRTTGRFPFLLPSNPYHPYYLKLLEE 408
>11_01_0374 -
2843405-2843508,2844134-2844239,2844327-2844409,
2844886-2845078,2845527-2845662,2846185-2846264,
2846348-2846932,2847058-2847126,2847203-2847347,
2847442-2847542,2848208-2849066,2849397-2849536,
2849606-2849783,2849885-2850287,2850770-2850833,
2851223-2851278,2851470-2851572
Length = 1134
Score = 34.3 bits (75), Expect = 0.40
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 9/95 (9%)
Query: 402 NFHNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGDNYPTNNSISGNENSYDSQIFEQI 461
N HN N S G + D N+ S+S S S DN NNS G+ + ++ +
Sbjct: 810 NLHNRNLS--GAHSLSDGDSNYEDPSSSVNSASHS-DN-ELNNSQYGSNDIKLNEAYSGF 865
Query: 462 AKQKKENIEDP-----DLSNLPNVNFSVPPPGFKP 491
Q + IE P D SN+ ++N P G P
Sbjct: 866 DAQASQQIEKPTRAYSDSSNMSSLNTFEDPAGIPP 900
>08_01_0527 +
4580599-4580818,4580933-4581806,4581891-4581955,
4582055-4582110,4582955-4583058,4583310-4583382,
4583474-4583654,4584537-4584622
Length = 552
Score = 33.1 bits (72), Expect = 0.92
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 621 RQKSKSPSPIPKDLQKQPTPPGRRYRSRSKTPEP 654
RQ+ +PSP P+D + P R+ R R TP P
Sbjct: 152 RQRQDTPSPDPRDAAGKDLSPPRQRRRRQDTPSP 185
>01_01_0489 +
3608720-3608811,3609326-3609431,3609518-3609581,
3609905-3609965,3610017-3610144,3610236-3610385,
3610537-3610791,3611060-3611265,3611469-3611696,
3612161-3612259
Length = 462
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 727 LGGAYPTTSGGIDSTNKGHQMLQKMGWSAG-GLGASGQGIAEPI 769
+GGA + N +M++ MGW G LG S +G+ EPI
Sbjct: 402 MGGASVDMNFRSSGLNSAKKMMENMGWKEGEALGKSTKGMVEPI 445
>02_05_1041 -
33713561-33714564,33714844-33714904,33715640-33715951,
33716780-33716917
Length = 504
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 746 QMLQKMGWSAG-GLGASGQGIAEPISGGFVRDRQDQYKGVGVS-LND 790
+M+ KMG+ G GLG SGQG+ +PI + +Q V S +ND
Sbjct: 310 KMMAKMGYREGMGLGVSGQGMLDPIPVKVLPPKQSLDHAVAASEVND 356
>02_01_0642 - 4803464-4805665,4806231-4806320
Length = 763
Score = 32.3 bits (70), Expect = 1.6
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 121 VNSAPPPLPQHPQEIDSITTQINVLKEQITQSEN-NLNAQHAVLIQQQQV--KINELVS- 176
V S L + + ++ T ++ +L++ + Q EN + N+ V I++ ++ NE+
Sbjct: 413 VESLEAVLTKERESLEEKTKEVELLQKALVQKENEHSNSLKLVEIKESELLEARNEVQDM 472
Query: 177 KAQMESLQIMADENNINLSELDNILQPI 204
K+++ES+QI E + LSE L +
Sbjct: 473 KSKVESIQIAVQEKDSELSETQRRLAEV 500
>06_03_0610 - 22715637-22716797
Length = 386
Score = 31.5 bits (68), Expect = 2.8
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 135 IDSITTQIN--VLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQIMADENNI 192
ID I +++ + K Q+ +++ A H+ ++ + + K+NEL Q+E Q E N+
Sbjct: 28 IDQIVSEVEQAITKMQMMNTDSMGTADHSSILAELKAKLNELAPLNQLEGCQ---KELNV 84
Query: 193 NLSELDNILQ 202
LS+ +L+
Sbjct: 85 ALSKYLKLLE 94
>04_01_0301 + 4016588-4016627,4016715-4018837
Length = 720
Score = 31.5 bits (68), Expect = 2.8
Identities = 28/153 (18%), Positives = 64/153 (41%), Gaps = 7/153 (4%)
Query: 133 QEIDSITTQINVLKEQITQSENNLNAQHAVL---IQQQQVKINELVSKAQMESLQIMADE 189
++++ + V+ Q + E++L Q+ +L + + K N +V K QME ++ ++
Sbjct: 50 KQLEETKQEAQVISRQKEEVESSLKGQNEMLGLKVLNVEEKYNHMVEKLQMELCALVKEK 109
Query: 190 NNINL--SELDNILQPIIDSCTKDSISSGKGWILQHATSHDAGKVISQHLLRKVTQTGAA 247
+ + +L L+ I KD + S K + A +++ + + ++
Sbjct: 110 EKMMMESEDLKRRLEEI--QAKKDLMESEKDMLRSEAMITKQKQIMFEAEIERLNMELVV 167
Query: 248 FTQKLHIIYLVNDVLHHCARKNAEDLKKNLENV 280
T+ + + K EDLK+ E +
Sbjct: 168 LTEAKKAAAKACEAQNDEIMKELEDLKRKFEEL 200
>04_03_0941 -
20950190-20951088,20952436-20952478,20952580-20952606,
20953189-20953301,20953872-20954715,20955740-20955790,
20956026-20956126,20956205-20956244,20956360-20957124
Length = 960
Score = 31.1 bits (67), Expect = 3.7
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
Query: 401 GNFHNSNFSDIGY-------PQMGGYDQNFNANSNSQQYGSESGDNYPTNNSISGNENS 452
G + S+ +D GY P G YD NA SN+ YG + T+NS SG S
Sbjct: 834 GGYKKSSSNDDGYGGSGYSKPSTGDYDSGKNA-SNTDGYGGSGYNKSSTDNSESGYNKS 891
>03_03_0248 +
15819264-15819460,15820691-15820729,15820797-15820936,
15821150-15821225,15822866-15823160,15823236-15823342,
15823442-15823489,15823568-15823853,15823954-15823961,
15824083-15824184,15824426-15824553,15824664-15824741,
15825047-15825145,15825247-15825302
Length = 552
Score = 31.1 bits (67), Expect = 3.7
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 585 ERPRDNEGWEKLGLYEYYKAKNSARKMKE-DAIAQGYRQKSKSPSPIPKDLQK--QPTPP 641
ER R+ E +G Y R+ D+ ++G R +S+S S P ++ + T
Sbjct: 264 EREREREAARSVGRVSYRDPYREQRRSPSYDSYSRGRRSRSRSRSRSPSYSRRHGRGTHA 323
Query: 642 GRRYRSRSKTP 652
YRS+ KTP
Sbjct: 324 ESNYRSKPKTP 334
>02_05_0036 -
25292150-25293124,25294021-25294206,25294704-25294874,
25295135-25295353,25295461-25295712,25295802-25295903,
25296487-25296684,25296762-25297046,25297640-25297709,
25297797-25297970,25298825-25298952,25299059-25299163,
25299686-25300030,25300361-25300563,25300964-25301045,
25301667-25301744
Length = 1190
Score = 31.1 bits (67), Expect = 3.7
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 7/104 (6%)
Query: 375 QLEMQKHALEMQKTXXXXXXXXXSNMGNFHNSNFSDIGYPQMGGYDQNFNANSNSQQYGS 434
+LE + A ++K S H++ FS G G ++N G+
Sbjct: 891 ELEESERAASVEKPENEKLSDSESQKVQPHDTAFSANGRSSANGAEEN-----GKDHEGA 945
Query: 435 ESGDNYPTNNSISGNENSYDSQIFEQIAKQKKENIEDPDLSNLP 478
+S ++Y + SI G+E+ D +FE + EN D + +P
Sbjct: 946 DS-ESYSDSGSIDGHEDEED-LMFEDKSNDASENEGDDEDDGIP 987
>08_02_0036 -
11455762-11455802,11455996-11456104,11456207-11456854,
11457422-11457491,11458563-11458624,11458729-11458803,
11459423-11459514,11460233-11461466
Length = 776
Score = 30.7 bits (66), Expect = 4.9
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 744 GHQMLQKMGWSAG-GLGASGQGIAEPI 769
G +M+ KMG+ G GLG GQG+ +PI
Sbjct: 614 GSKMMAKMGFIEGTGLGKDGQGMMQPI 640
Score = 29.9 bits (64), Expect = 8.5
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 744 GHQMLQKMGWSAG-GLGASGQGIAEPIS 770
G +M+ +MG+ G GLG GQGI P++
Sbjct: 699 GSKMMARMGFVEGSGLGKDGQGIVNPLT 726
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 30.7 bits (66), Expect = 4.9
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 623 KSKSPSPIPKDLQKQPTPPGRRYRSRSKTPEP 654
K +P+P P +K+P+PP ++ + SK P P
Sbjct: 135 KPDAPAPAPAK-KKKPSPPSKKKKKSSKAPAP 165
>06_01_0920 + 7098007-7098065,7098538-7099345
Length = 288
Score = 30.7 bits (66), Expect = 4.9
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 598 LYEYYKAKNSARKMKEDAIAQGYRQKSKSPSPIPKDLQKQPTPPGRRYRSRSKTPEPNIP 657
L E +AKN + G ++ S+ P+P P DL K PP + + P+P P
Sbjct: 135 LTEMLRAKNQEPSPPPSPLLSGVQEPSRVPAP-PPDLDKDKAPP----KPKPPKPKPKPP 189
>05_04_0022 - 17217626-17217643,17217740-17217856,17217987-17218112,
17218194-17218340,17218423-17218533,17218625-17218747,
17218827-17218958,17219157-17219252,17219532-17219653,
17219833-17220130,17220213-17220458,17220711-17220852,
17221068-17222105,17222183-17222262,17222558-17222800,
17222907-17222967,17224059-17224675
Length = 1238
Score = 30.7 bits (66), Expect = 4.9
Identities = 18/87 (20%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 301 NKLLRLWESKSNYFETAVIEKMKSPTSSYQDYQNALISQHANAISHLTQQTKSTFENYQS 360
+K +R+W+ E + +++ ++ Y + +I N + + ++ST Y+S
Sbjct: 1021 DKSIRVWKMAQRKLECVEVIQIREAVEQFEIYNDKIIVLTPNNVLKFSYSSRSTQTFYKS 1080
Query: 361 QH---------QAFVGHTMQQIQQLEM 378
+H +A++G T IQ+L++
Sbjct: 1081 KHVKSLAVAHGKAYLGCTDLSIQELDV 1107
>03_02_0998 -
13097675-13098079,13098307-13098441,13098522-13098722,
13099060-13099359,13099449-13099649,13099932-13100096,
13100170-13100349,13100896-13100937,13101040-13101117
Length = 568
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/78 (21%), Positives = 32/78 (41%)
Query: 576 DAFFASPNHERPRDNEGWEKLGLYEYYKAKNSARKMKEDAIAQGYRQKSKSPSPIPKDLQ 635
D E P+ EG K ++ + + ++ED +G ++K K S +D
Sbjct: 441 DLVLGQSTEETPKKPEGASKKRKHQEAEPAGAEETIQEDGDQEGQKKKKKKKSKDSEDSP 500
Query: 636 KQPTPPGRRYRSRSKTPE 653
G++ + +SK E
Sbjct: 501 VADADGGKKKKKKSKESE 518
>02_05_0998 +
33391021-33391266,33391354-33391502,33391600-33391681,
33391808-33392223,33393659-33393854,33393932-33394074,
33394153-33394327,33394450-33394503,33394701-33394877,
33395832-33395944,33396083-33396265,33396570-33396632,
33396742-33396894,33396922-33396994,33397076-33397206,
33397285-33397420,33397504-33397581,33398146-33398262,
33398473-33398535,33398619-33398720
Length = 949
Score = 30.7 bits (66), Expect = 4.9
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 5 QPPQDQDLRNIIDKLAQFVARNGPEFEKMTKNKQKNNPKF 44
Q D+ L + +L +F+ R+G +FE + + +K +P+F
Sbjct: 727 QATLDESLYELAGELVRFLLRSGRDFENASTDSEKLSPRF 766
>01_05_0299 -
20595919-20595963,20596111-20596221,20596901-20596984,
20597350-20597450,20597584-20598301
Length = 352
Score = 30.7 bits (66), Expect = 4.9
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 404 HNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGD 438
+N+N + G+ +MGGY+ + N N YG GD
Sbjct: 115 NNNNVNAFGFNKMGGYNNSSNGGGN---YGGNGGD 146
>09_06_0147 + 21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 599 YEYYKAKNSARKMKEDAIAQGYRQKSK-----SPSPIPKDLQKQPTPPGRRYRSR 648
Y+Y + +SA+ KE +A+ + K+K P P+P D + T G + R
Sbjct: 3007 YQYPELPSSAKSRKETDVAEADKTKAKQMTFGQPVPVPSDATRSVTDQGAQQPQR 3061
>08_02_0526 +
18184146-18184168,18184247-18184438,18184846-18184954,
18185071-18185220,18185973-18186136,18186273-18186359,
18187083-18187137,18187911-18188333
Length = 400
Score = 30.3 bits (65), Expect = 6.5
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 603 KAKNSARKMKEDAIAQGYRQKSKSPSPIPKDLQKQPTP-------PGRRYRSRSKTPEP 654
+ + +AR + A G KSKSP+P+ + + P P P R RS S++P P
Sbjct: 6 EVRYTARSITPPADRNG-TSKSKSPTPVRRSTSRSPPPKKSDSRSPPPRRRSTSRSPRP 63
>08_01_0133 +
1062365-1063057,1063210-1063318,1063914-1064005,
1064399-1064560,1064718-1064834,1065029-1065127
Length = 423
Score = 30.3 bits (65), Expect = 6.5
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 416 MGGYDQNFNANSNSQQYGSESGDNYPTNNSISGNENSYDSQIFEQIAKQKKENIEDPDLS 475
MGG ++ S+S S S D++ + +S S + S S K+K +E DL
Sbjct: 111 MGGCSDTSSSYSSSFS-SSSSSDSFSSWSSSSDSWRSSSSSSSSPPKKKKVVVVESADLE 169
Query: 476 NLPNVNFSVPPPGFKPLDNAPLQAF 500
+V + PP P+ P + F
Sbjct: 170 THESVGTAASPPPPPPVALTPWEKF 194
>07_03_1180 -
24601631-24602142,24602518-24602581,24602811-24602876,
24602949-24603070,24603170-24603344,24603466-24603701,
24603781-24604129,24605009-24605146,24605242-24605289
Length = 569
Score = 30.3 bits (65), Expect = 6.5
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Query: 399 NMGNFH-NSNFSDIGYPQMG-GYDQNFNA-NSNSQQYGSESGDNYPTNNSISGNENS 452
N G +H N N GY Q G GY QN N N N +Y ++GD Y N + +G+ +
Sbjct: 478 NGGGYHQNGN----GYHQNGDGYHQNGNRYNQNGNRY-HQNGDEYYQNGNGNGHRQN 529
>07_03_1461 -
26700613-26700621,26700784-26700851,26701778-26701919,
26702011-26702318,26702415-26702481,26702543-26702664,
26702763-26702815,26702924-26703006,26703092-26703160,
26703235-26703633
Length = 439
Score = 29.9 bits (64), Expect = 8.5
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 294 EEQEAKLNKLLRLWESKSNYFETAVIEKMKSPTSSYQDYQNALISQHANAISHLTQQTKS 353
E+ EA L +LLR + +T + ++ SSY+ + + Q + + L + K
Sbjct: 132 EKSEATLLELLRRLQQLELTVDTLTVTEIGKAVSSYRKHNS---KQIRHLVRLLIEGWKR 188
Query: 354 TFENYQSQHQAFVGHTMQQI 373
+ + S A V HT Q +
Sbjct: 189 IVDEWMSSRDAIVDHTPQSM 208
>05_01_0137 + 917533-917814,918080-918352
Length = 184
Score = 29.9 bits (64), Expect = 8.5
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 601 YYKAKNSARKMKEDAIAQGYRQKSKSPSPIPKDLQKQPTPPGRRYRS--RSKTPEPNIP 657
+Y +N + +++A A + SP+P P PP R RS R TP P P
Sbjct: 33 FYWFQNHKARDRQNAAAASASPTTSSPAPTTTTTTSPPPPPSFRRRSFCRRCTPPPPPP 91
>04_01_0347 -
4546566-4546604,4546710-4546748,4546834-4547059,
4547222-4547374,4547453-4547706,4547734-4548366,
4548453-4548899,4548978-4549277,4549386-4549697,
4550190-4550243
Length = 818
Score = 29.9 bits (64), Expect = 8.5
Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 294 EEQEAKLNKLLRLWESKSNYFETAVIEKMKSPTSSYQDYQNALISQHA----NAISHLTQ 349
E AK+ + +R + + A E++ SPT + Y + ++++ +A+ H+T+
Sbjct: 313 ESMRAKIRQEIREEQQNTQAAAVAAHEELGSPTQKHSSYASTEVAENPTSVDSAVDHITE 372
Query: 350 QTKST 354
T T
Sbjct: 373 PTSCT 377
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.129 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,702,901
Number of Sequences: 37544
Number of extensions: 825079
Number of successful extensions: 2300
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 2270
Number of HSP's gapped (non-prelim): 53
length of query: 816
length of database: 14,793,348
effective HSP length: 88
effective length of query: 728
effective length of database: 11,489,476
effective search space: 8364338528
effective search space used: 8364338528
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 64 (29.9 bits)
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