Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000244-TA|BGIBMGA000244-PA|IPR000061|SWAP/Surp,
IPR000467|D111/G-patch, IPR006569|Regulation of nuclear pre-mRNA
protein
(816 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 29 0.65
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 28 0.85
AY146746-1|AAO12061.1| 333|Anopheles gambiae odorant-binding pr... 27 2.0
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 26 3.4
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 26 3.4
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 26 3.4
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 26 3.4
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 26 3.4
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 26 4.6
AY578801-1|AAT07306.1| 506|Anopheles gambiae dSmad2 protein. 25 6.0
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 25 8.0
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 28.7 bits (61), Expect = 0.65
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 136 DSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQIMADENNINLS 195
D +T + LK+QI Q + +N+Q L + + ++L+ + L+I EN I
Sbjct: 860 DEMTAAVTALKQQIKQHKEKMNSQSKELKAKYHQR-DKLLKQNDELKLEIKKKENEITKV 918
Query: 196 ELDN 199
+N
Sbjct: 919 RNEN 922
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2
protein.
Length = 961
Score = 28.3 bits (60), Expect = 0.85
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 155 NLNAQHAVLIQQQQVKINELVSKAQMESLQIMADENNINLSELD-NILQPIIDS-CTKDS 212
N QH QQQQ + + + Q + ++A + + S++D QP+ +S C ++
Sbjct: 897 NYRQQHQQQQQQQQQQQQQHEHEQQQQQNSMLATQQRLEASQMDQGTDQPMQESPCNEEK 956
Query: 213 ISSG 216
I +G
Sbjct: 957 IGAG 960
Score = 26.2 bits (55), Expect = 3.4
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
Query: 356 ENYQSQHQAFVGHTMQQIQQLEMQKHALEMQK 387
ENY+ QHQ QQ QQ + Q+H E Q+
Sbjct: 896 ENYRQQHQ-----QQQQQQQQQQQQHEHEQQQ 922
>AY146746-1|AAO12061.1| 333|Anopheles gambiae odorant-binding
protein AgamOBP43 protein.
Length = 333
Score = 27.1 bits (57), Expect = 2.0
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 303 LLRLWESKSNYFETAVIEKMKSPTSSYQDYQNALISQHANAISHLTQQTKSTFENYQSQH 362
LLR W + E A I + P QDYQN S A +T + ++ H
Sbjct: 86 LLRFWNDTTGLRE-ATIRQYYEPAPEDQDYQNRTRSCLAALEPSVTDVCERAHRSFLCYH 144
Query: 363 QAF 365
Q +
Sbjct: 145 QHY 147
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 26.2 bits (55), Expect = 3.4
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 424 NANSNSQQYGSESGDNYPTNNSISGNENSYDS 455
NA+SN+ + S N NN+IS N N+ +S
Sbjct: 194 NASSNNSNNNNNSSSN-NNNNTISSNNNNNNS 224
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 26.2 bits (55), Expect = 3.4
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 424 NANSNSQQYGSESGDNYPTNNSISGNENSYDS 455
NA+SN+ + S N NN+IS N N+ +S
Sbjct: 194 NASSNNSNNNNNSSSN-NNNNTISSNNNNNNS 224
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 26.2 bits (55), Expect = 3.4
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 310 KSNYFETAVIEKMKSPTSSYQDYQNALIS----QHANAISHLTQQTKSTFENYQSQHQAF 365
KSN+ TA+ ++++ S Y + A+I + A A+ H + +S + HQ F
Sbjct: 2367 KSNFSMTAINQELRDLLSEYASHLPAIIGALYHKFATALGHNSADVQSYKIDANGNHQHF 2426
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 26.2 bits (55), Expect = 3.4
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 310 KSNYFETAVIEKMKSPTSSYQDYQNALIS----QHANAISHLTQQTKSTFENYQSQHQAF 365
KSN+ TA+ ++++ S Y + A+I + A A+ H + +S + HQ F
Sbjct: 2368 KSNFSMTAINQELRDLLSEYASHLPAIIGALYHKFATALGHNSADVQSYKIDANGNHQHF 2427
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 26.2 bits (55), Expect = 3.4
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 424 NANSNSQQYGSESGDNYPTNNSISGNENSYDS 455
NA+SN+ + S N NN+IS N N+ +S
Sbjct: 146 NASSNNSNNNNNSSSN-NNNNTISSNNNNNNS 176
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 25.8 bits (54), Expect = 4.6
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 424 NANSNSQQYGSESGDNYPTNNSISGNENSYDS 455
NA+SN+ + S N NN+IS N N+ +S
Sbjct: 194 NASSNNSNNNNNSSGN-NNNNTISSNNNNNNS 224
>AY578801-1|AAT07306.1| 506|Anopheles gambiae dSmad2 protein.
Length = 506
Score = 25.4 bits (53), Expect = 6.0
Identities = 15/60 (25%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Query: 477 LPNV-NFSVPPPGFKPLDNAPLQAFQNGXXXXXXXXXXXXXXXXEINNEDLMPSVPYFEL 535
+PN+ N PPPG+ D PL N + S+ Y+EL
Sbjct: 262 VPNIPNTETPPPGYMSEDGDPLDQNDNMTDLSRMSPSEMDTQPVMYHEPTFWCSISYYEL 321
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 25.0 bits (52), Expect = 8.0
Identities = 18/58 (31%), Positives = 21/58 (36%)
Query: 324 SPTSSYQDYQNALISQHANAISHLTQQTKSTFENYQSQHQAFVGHTMQQIQQLEMQKH 381
SP SS D A Q+ N S Q Q Q Q QQL+ Q+H
Sbjct: 91 SPESSASDQSAAYTLQNLNLSSSAGTMNYPGMGYQQQQQQQQQQQQHHQHQQLQQQQH 148
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.312 0.129 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,650
Number of Sequences: 2123
Number of extensions: 28173
Number of successful extensions: 59
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 51
Number of HSP's gapped (non-prelim): 17
length of query: 816
length of database: 516,269
effective HSP length: 70
effective length of query: 746
effective length of database: 367,659
effective search space: 274273614
effective search space used: 274273614
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 52 (25.0 bits)
- SilkBase 1999-2023 -