Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000244-TA|BGIBMGA000244-PA|IPR000061|SWAP/Surp,
IPR000467|D111/G-patch, IPR006569|Regulation of nuclear pre-mRNA
protein
(816 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81094-6|CAB03149.2| 675|Caenorhabditis elegans Hypothetical pr... 123 4e-28
AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CT... 123 4e-28
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 50 5e-06
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 50 5e-06
U13876-13|AAA21172.3| 370|Caenorhabditis elegans Prion-like-(q/... 47 5e-05
AL032649-4|CAA21703.2| 511|Caenorhabditis elegans Hypothetical ... 41 0.004
AL032649-3|CAA21702.2| 502|Caenorhabditis elegans Hypothetical ... 41 0.004
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 41 0.004
U32305-11|AAL50323.1| 663|Caenorhabditis elegans Splicing facto... 40 0.005
U32305-10|AAM75378.1| 749|Caenorhabditis elegans Splicing facto... 40 0.005
U32305-9|AAM75380.1| 751|Caenorhabditis elegans Splicing factor... 40 0.005
U06933-1|AAA64938.1| 551|Caenorhabditis elegans CeSWAP protein. 40 0.005
U06932-1|AAA64937.1| 749|Caenorhabditis elegans CeSWAP protein. 40 0.005
U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symme... 40 0.009
Z49908-1|CAA90093.1| 816|Caenorhabditis elegans Hypothetical pr... 38 0.022
DQ342049-1|ABC69941.1| 830|Caenorhabditis elegans STIP protein. 38 0.022
U55364-4|AAA97972.1| 382|Caenorhabditis elegans Prion-like-(q/n... 33 0.61
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 33 0.81
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 33 0.81
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 33 0.81
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 33 0.81
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 33 0.81
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 33 0.81
Z11505-7|CAA77581.1| 918|Caenorhabditis elegans Hypothetical pr... 33 1.1
U55364-5|AAQ23124.1| 368|Caenorhabditis elegans Prion-like-(q/n... 33 1.1
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 32 1.4
Z73906-11|CAD36485.1| 136|Caenorhabditis elegans Hypothetical p... 32 1.4
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 32 1.9
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 32 1.9
AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical... 32 1.9
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 32 1.9
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 31 2.5
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 31 2.5
U21733-1|AAB38384.1| 869|Caenorhabditis elegans UNC-44 protein. 31 2.5
AL023493-2|CAD44137.1| 909|Caenorhabditis elegans Hypothetical ... 31 2.5
AL023493-1|CAA18898.1| 947|Caenorhabditis elegans Hypothetical ... 31 2.5
Z68319-3|CAA92701.1| 339|Caenorhabditis elegans Hypothetical pr... 31 3.3
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 31 3.3
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 31 3.3
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 31 4.3
Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical pr... 30 5.7
Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical pr... 30 5.7
U97005-4|AAB52283.1| 314|Caenorhabditis elegans Hypothetical pr... 30 5.7
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 30 5.7
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 30 5.7
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 30 5.7
Z92831-7|CAB07365.2| 355|Caenorhabditis elegans Hypothetical pr... 30 7.6
Z92777-12|CAJ58496.1| 355|Caenorhabditis elegans Hypothetical p... 30 7.6
Z81085-1|CAB03112.3| 263|Caenorhabditis elegans Hypothetical pr... 30 7.6
Z68114-1|CAA92152.1| 451|Caenorhabditis elegans Hypothetical pr... 30 7.6
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 30 7.6
AC024756-5|AAK29880.3| 414|Caenorhabditis elegans Hypothetical ... 30 7.6
>Z81094-6|CAB03149.2| 675|Caenorhabditis elegans Hypothetical
protein F58G11.5 protein.
Length = 675
Score = 123 bits (297), Expect = 4e-28
Identities = 84/334 (25%), Positives = 144/334 (43%), Gaps = 10/334 (2%)
Query: 127 PLPQHPQEIDSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQIM 186
P P EI +I+ L+++I SE NLNA + + + + ++ ++ M
Sbjct: 39 PSLMDPPEIVEWRKKIDELRQKIIDSEQNLNAHRNGMDELLMAHLKSAIRTSETMKIEKM 98
Query: 187 ADENNINLSELDNILQPIID-SCTKDSISSGKGWILQHATSHDAGKVISQHLLRKVTQTG 245
+NN+N+ +L++ L + C+KD IS K WI ++ TS ++I LL KV
Sbjct: 99 LSQNNLNVEDLNSYLDAMATPKCSKDLISQAKKWIFEYCTSDQLREIILSFLLNKVKDEA 158
Query: 246 AAFTQKLHIIYLVNDVLHHCARKNAEDLKKNLENVVVPMFCNA-SIAVTEEQEAKL-NKL 303
+ +LHI+YL+ND HC RK E+ K L V M+ ++ + E KL KL
Sbjct: 159 SGEYLRLHILYLINDWAFHCQRKKEENQMKMLARYVPKMYAYCIELSSSSELSNKLEGKL 218
Query: 304 LRLWESKSNYFETAVIEKMKSPTSSYQDYQNALISQHANAISHLTQQTKSTFENYQSQHQ 363
L WE + YF +V +++++ + S + + +TF+ Y+ QH
Sbjct: 219 LGEWEGR-QYFADSVFKQLRNTVQIVSTDREIEKSSYGTIRESIRSNLMATFDGYEQQHV 277
Query: 364 AFVGHTMQQIQQLEMQKHALEMQKTXXXXXXXXXSNMGNFHNSNFSDIGYPQMGGYDQNF 423
+ H +QI ++E + + + + N S F P+ +
Sbjct: 278 TYSQHIQRQIDEVERKIDEFRHGPSSGPASHHPNAPLSNMRRSRFDQA--PKHSAERPHA 335
Query: 424 NA----NSNSQQYGSESGDNYPTNNSISGNENSY 453
+ N N QQ E D P + + SY
Sbjct: 336 SVSNTWNQNDQQDDGEDIDGMPFDEENLKPQKSY 369
Score = 77.0 bits (181), Expect = 5e-14
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 742 NKGHQMLQKMGWSAGGLGASGQGIAEPISGGFVRDRQDQYKGVGVSLNDPYENFRKNKGA 801
NKG Q++ KMGW GLGA+ GI +P+SGG VR+R +Q+ G+G SL DPYE FRK +
Sbjct: 606 NKGAQLMAKMGWGGKGLGANESGIVDPVSGGEVRNRNEQFMGLGRSL-DPYEQFRKQRSG 664
Query: 802 AFISR 806
+ R
Sbjct: 665 TYHDR 669
Score = 30.7 bits (66), Expect = 4.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 522 NNEDLMPSVPYFELPAGLMVPLIMLEDDNYK 552
+ E+L P Y LPAG+M PL+ + Y+
Sbjct: 359 DEENLKPQKSYMALPAGIMTPLVSMNSVMYE 389
>AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CTD
associated factor 6 protein.
Length = 675
Score = 123 bits (297), Expect = 4e-28
Identities = 84/334 (25%), Positives = 144/334 (43%), Gaps = 10/334 (2%)
Query: 127 PLPQHPQEIDSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQIM 186
P P EI +I+ L+++I SE NLNA + + + + ++ ++ M
Sbjct: 39 PSLMDPPEIVEWRKKIDELRQKIIDSEQNLNAHRNGMDELLMAHLKSAIRTSETMKIEKM 98
Query: 187 ADENNINLSELDNILQPIID-SCTKDSISSGKGWILQHATSHDAGKVISQHLLRKVTQTG 245
+NN+N+ +L++ L + C+KD IS K WI ++ TS ++I LL KV
Sbjct: 99 LSQNNLNVEDLNSYLDAMATPKCSKDLISQAKKWIFEYCTSDQLREIILSFLLNKVKDEA 158
Query: 246 AAFTQKLHIIYLVNDVLHHCARKNAEDLKKNLENVVVPMFCNA-SIAVTEEQEAKL-NKL 303
+ +LHI+YL+ND HC RK E+ K L V M+ ++ + E KL KL
Sbjct: 159 SGEYLRLHILYLINDWAFHCQRKKEENQMKMLARYVPKMYAYCIELSSSSELSNKLEGKL 218
Query: 304 LRLWESKSNYFETAVIEKMKSPTSSYQDYQNALISQHANAISHLTQQTKSTFENYQSQHQ 363
L WE + YF +V +++++ + S + + +TF+ Y+ QH
Sbjct: 219 LGEWEGR-QYFADSVFKQLRNTVQIVSTDREIEKSSYGTIRESIRSNLMATFDGYEQQHV 277
Query: 364 AFVGHTMQQIQQLEMQKHALEMQKTXXXXXXXXXSNMGNFHNSNFSDIGYPQMGGYDQNF 423
+ H +QI ++E + + + + N S F P+ +
Sbjct: 278 TYSQHIQRQIDEVERKIDEFRHGPSSGPASHHPNAPLSNMRRSRFDQA--PKHSAERPHA 335
Query: 424 NA----NSNSQQYGSESGDNYPTNNSISGNENSY 453
+ N N QQ E D P + + SY
Sbjct: 336 SVSNTWNQNDQQDDGEDIDGMPFDEENLKPQKSY 369
Score = 77.0 bits (181), Expect = 5e-14
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 742 NKGHQMLQKMGWSAGGLGASGQGIAEPISGGFVRDRQDQYKGVGVSLNDPYENFRKNKGA 801
NKG Q++ KMGW GLGA+ GI +P+SGG VR+R +Q+ G+G SL DPYE FRK +
Sbjct: 606 NKGAQLMAKMGWGGKGLGANESGIVDPVSGGEVRNRNEQFMGLGRSL-DPYEQFRKQRSG 664
Query: 802 AFISR 806
+ R
Sbjct: 665 TYHDR 669
Score = 30.7 bits (66), Expect = 4.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 522 NNEDLMPSVPYFELPAGLMVPLIMLEDDNYK 552
+ E+L P Y LPAG+M PL+ + Y+
Sbjct: 359 DEENLKPQKSYMALPAGIMTPLVSMNSVMYE 389
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 50.4 bits (115), Expect = 5e-06
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 11 DLRNIIDKLAQFVARNGPEFEKMTKNKQKNNPKFSFL-YGGEYFNYYQYKV 60
D+R I+DK A+F A+NG +FE + K+ NPKF+FL Y YY+ V
Sbjct: 33 DIRTIVDKTARFAAKNGVDFENKIREKEAKNPKFNFLSITDPYHAYYKKMV 83
Score = 30.3 bits (65), Expect = 5.7
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 14 NIIDKLAQFVARNGPEFEKMTKNKQKNNPKFSFLYGGE-YFNYYQYKVTTEQAIL 67
++I +A FVARNG +F ++ N +F FL F Y+ V Q +L
Sbjct: 133 DLIRLVALFVARNGRQFLTQLMTREARNYQFDFLKPAHCNFTYFTKLVDQYQKVL 187
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 50.4 bits (115), Expect = 5e-06
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 11 DLRNIIDKLAQFVARNGPEFEKMTKNKQKNNPKFSFL-YGGEYFNYYQYKV 60
D+R I+DK A+F A+NG +FE + K+ NPKF+FL Y YY+ V
Sbjct: 33 DIRTIVDKTARFAAKNGVDFENKIREKEAKNPKFNFLSITDPYHAYYKKMV 83
Score = 30.3 bits (65), Expect = 5.7
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 14 NIIDKLAQFVARNGPEFEKMTKNKQKNNPKFSFLYGGE-YFNYYQYKVTTEQAIL 67
++I +A FVARNG +F ++ N +F FL F Y+ V Q +L
Sbjct: 133 DLIRLVALFVARNGRQFLTQLMTREARNYQFDFLKPAHCNFTYFTKLVDQYQKVL 187
>U13876-13|AAA21172.3| 370|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 46
protein.
Length = 370
Score = 47.2 bits (107), Expect = 5e-05
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 401 GN-FHNSNFSDIGY-----PQMGGYDQNFNANSNSQQ-YGSESGDNYPTNNSISGNENSY 453
GN ++N+N ++ GY Q GY+ N+N N+N QQ + + + +NY NN + N +
Sbjct: 38 GNQYYNNNNNNNGYYNQQQQQFNGYNNNYNNNNNQQQQFYNNNNNNYNNNNYNNNNNYNQ 97
Query: 454 DSQIFEQIAKQKKENIEDPDLSNLPNVNFSVPPPGFKPLDNAPLQAFQN 502
Q +Q +Q ++ ++ P + PP + P+Q+F++
Sbjct: 98 QPQGAQQPQQQVQQQVQQPQQPVQQPQPTPIRPPQPQRSGQQPVQSFES 146
>AL032649-4|CAA21703.2| 511|Caenorhabditis elegans Hypothetical
protein Y55D9A.2b protein.
Length = 511
Score = 40.7 bits (91), Expect = 0.004
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 738 IDSTNKGHQMLQKMGWSAG-GLGASGQGIAEPISGGFVRDRQDQYKGVGVSLNDP 791
+DS N G ++L+ MGWS G GLG QG EP++ +R KG+G + +P
Sbjct: 431 LDSGNVGFKLLKSMGWSEGQGLGKEKQGHVEPVATEVKNNR----KGLGANEKEP 481
>AL032649-3|CAA21702.2| 502|Caenorhabditis elegans Hypothetical
protein Y55D9A.2a protein.
Length = 502
Score = 40.7 bits (91), Expect = 0.004
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 738 IDSTNKGHQMLQKMGWSAG-GLGASGQGIAEPISGGFVRDRQDQYKGVGVSLNDP 791
+DS N G ++L+ MGWS G GLG QG EP++ +R KG+G + +P
Sbjct: 431 LDSGNVGFKLLKSMGWSEGQGLGKEKQGHVEPVATEVKNNR----KGLGANEKEP 481
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 40.7 bits (91), Expect = 0.004
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 7 PQDQDLRNIIDKLAQFVARNGPEFEKMTKNKQKNNPKFSFLYG--GEYFNYYQYKV 60
P D+ L ++D++A +V GP+FE M ++ NP F FL+ YY++++
Sbjct: 359 PPDRKLVRVMDRMAVYVVTEGPQFEAMICAEEFQNPMFQFLWDNTSALHVYYRWRI 414
Score = 33.1 bits (72), Expect = 0.81
Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 164 IQQQQVKINELVSKAQMESLQIMADENNINLSELDNILQPIIDSCTKDSISSGKGWILQH 223
+++++ K + K + + M+D+ L L L P K SI++ W +Q+
Sbjct: 500 MRREEEKERKRREKNEKKRNNRMSDKRRDKLETLIRELTP-----EKTSIAATMVWCIQN 554
Query: 224 ATSHDAGKVISQHLLRKVTQTGAAFTQKLHIIYLVNDVLHHCARKNAEDL 273
A I + + +T +K+ +YL+ND+L +C ++N D+
Sbjct: 555 AKY---AAEICECVYDSLTIEDIPLYKKISRLYLINDILSNCVQRNVRDV 601
>U32305-11|AAL50323.1| 663|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
b protein.
Length = 663
Score = 40.3 bits (90), Expect = 0.005
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 PQDQDLRNIIDKLAQFVARNGPEFEKMTKNKQKNN-PKFSFLYGGEYFN-YYQY 58
P + L +II+K A F+ NG + E + K KQ+NN +F FL N +Y+Y
Sbjct: 74 PSNMKLHHIIEKTASFIVANGTQMEIVIKAKQRNNAEQFGFLEFDHRLNPFYKY 127
>U32305-10|AAM75378.1| 749|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
a protein.
Length = 749
Score = 40.3 bits (90), Expect = 0.005
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 PQDQDLRNIIDKLAQFVARNGPEFEKMTKNKQKNN-PKFSFLYGGEYFN-YYQY 58
P + L +II+K A F+ NG + E + K KQ+NN +F FL N +Y+Y
Sbjct: 158 PSNMKLHHIIEKTASFIVANGTQMEIVIKAKQRNNAEQFGFLEFDHRLNPFYKY 211
>U32305-9|AAM75380.1| 751|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
d protein.
Length = 751
Score = 40.3 bits (90), Expect = 0.005
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 PQDQDLRNIIDKLAQFVARNGPEFEKMTKNKQKNN-PKFSFLYGGEYFN-YYQY 58
P + L +II+K A F+ NG + E + K KQ+NN +F FL N +Y+Y
Sbjct: 162 PSNMKLHHIIEKTASFIVANGTQMEIVIKAKQRNNAEQFGFLEFDHRLNPFYKY 215
>U06933-1|AAA64938.1| 551|Caenorhabditis elegans CeSWAP protein.
Length = 551
Score = 40.3 bits (90), Expect = 0.005
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 PQDQDLRNIIDKLAQFVARNGPEFEKMTKNKQKNN-PKFSFLYGGEYFN-YYQY 58
P + L +II+K A F+ NG + E + K KQ+NN +F FL N +Y+Y
Sbjct: 158 PSNMKLHHIIEKTASFIVANGTQMEIVIKAKQRNNAEQFGFLEFDHRLNPFYKY 211
>U06932-1|AAA64937.1| 749|Caenorhabditis elegans CeSWAP protein.
Length = 749
Score = 40.3 bits (90), Expect = 0.005
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 PQDQDLRNIIDKLAQFVARNGPEFEKMTKNKQKNN-PKFSFLYGGEYFN-YYQY 58
P + L +II+K A F+ NG + E + K KQ+NN +F FL N +Y+Y
Sbjct: 158 PSNMKLHHIIEKTASFIVANGTQMEIVIKAKQRNNAEQFGFLEFDHRLNPFYKY 211
>U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symmetry
protein 1 protein.
Length = 1425
Score = 39.5 bits (88), Expect = 0.009
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 119 LAVNSAPPPLPQHPQEIDSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKA 178
L APPP H + + ++ N E+ + N H V++ Q+V+ N V +
Sbjct: 24 LPPRGAPPPTAYHASRMAATSSSTNGSFEK-SAIPGNARKLHVVIVIDQKVQKNLRVREM 82
Query: 179 QMESLQIMADENNINLSELD 198
++ +Q +AD N+NL+ +D
Sbjct: 83 ALKDVQKVADTLNVNLTRID 102
>Z49908-1|CAA90093.1| 816|Caenorhabditis elegans Hypothetical
protein C07E3.1a protein.
Length = 816
Score = 38.3 bits (85), Expect = 0.022
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 737 GIDSTNKGHQMLQKMGWSAG-GLGASGQGIAEPISGGFVRDR 777
G ++NK +M+Q MG+ G GLGA GQGI EP+ + R
Sbjct: 136 GDGNSNKIMKMMQAMGYKPGEGLGAQGQGIVEPVQAQLRKGR 177
>DQ342049-1|ABC69941.1| 830|Caenorhabditis elegans STIP protein.
Length = 830
Score = 38.3 bits (85), Expect = 0.022
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 737 GIDSTNKGHQMLQKMGWSAG-GLGASGQGIAEPISGGFVRDR 777
G ++NK +M+Q MG+ G GLGA GQGI EP+ + R
Sbjct: 150 GDGNSNKIMKMMQAMGYKPGEGLGAQGQGIVEPVQAQLRKGR 191
>U55364-4|AAA97972.1| 382|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 31,
isoform a protein.
Length = 382
Score = 33.5 bits (73), Expect = 0.61
Identities = 39/150 (26%), Positives = 53/150 (35%), Gaps = 13/150 (8%)
Query: 307 WESKSNYFETAVIEKMKSPTSSYQDYQNALISQHANAISHLTQQTKSTFENYQSQHQAFV 366
+++ F T S YQ Q A Q+ + S L +T + Q
Sbjct: 20 YDNNGQTFTTNQFAAAYSTNQQYQPSQGAQYDQYGS--STLQYNNGATAQPIQYNQNQQY 77
Query: 367 GHTMQQIQQLEMQKHALEMQKTXXXXXXXXXSNMGNFHNSNFSDIGYPQMGGYDQNFNAN 426
G T Q Q +MQ SNM N NSN G G ++A
Sbjct: 78 GSTAQYNQN--------QMQNQQNSNQYSTTSNMNNQQNSNQYQQGQQNNYGTQAQYDAG 129
Query: 427 SNSQQYGSESGDNYPTNNSISGNENSYDSQ 456
N Q G +SG +N+ N+NS SQ
Sbjct: 130 QN--QMG-QSGQVQGYSNNGYSNQNSQMSQ 156
Score = 30.7 bits (66), Expect = 4.3
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Query: 349 QQTKSTFENYQSQHQAFVGHTMQ-QIQQLEMQKHALEMQKTXXXXXXXXXSNMGNFHNSN 407
QQ + +Q+Q G Q Q QQ Q + Q+T G++ +N
Sbjct: 288 QQANQNGQYQNTQYQQQNGQNGQNQFQQSNGQNQNSQYQQTSNQQMNNQQYQTGDYQQTN 347
Query: 408 FSDIGYPQMGGYDQNFNANSNSQQ 431
+G P G N N N+QQ
Sbjct: 348 TQSMGSPNTGTQQSN-NQQMNAQQ 370
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 33.1 bits (72), Expect = 0.81
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 603 KAKNSARKMKEDAIAQGYRQKSKSPSPIPKDLQ-KQPTPPGRRYRSRSKTPEPNIP 657
+AK+ ++ A + SKSP P PK + + +PP RR RS S + P P
Sbjct: 333 RAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRSKSPPARRRRSPSASKSPPAP 388
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 33.1 bits (72), Expect = 0.81
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 120 AVNSAPPPLPQHPQEIDSITTQINVLKEQITQSEN-NLNAQHAVLIQQQQVKINELVSKA 178
A+ S PPP+P P + + T + V +Q + N N++ QH+ ++E +
Sbjct: 1246 AITSCPPPVPSVPPVVSNGTLNLEVAPKQTPSATNQNVDTQHSSSTASTATLVSETPATV 1305
Query: 179 QMESLQIMA 187
+ + + A
Sbjct: 1306 HVTPISVPA 1314
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 33.1 bits (72), Expect = 0.81
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 120 AVNSAPPPLPQHPQEIDSITTQINVLKEQITQSEN-NLNAQHAVLIQQQQVKINELVSKA 178
A+ S PPP+P P + + T + V +Q + N N++ QH+ ++E +
Sbjct: 1246 AITSCPPPVPSVPPVVSNGTLNLEVAPKQTPSATNQNVDTQHSSSTASTATLVSETPATV 1305
Query: 179 QMESLQIMA 187
+ + + A
Sbjct: 1306 HVTPISVPA 1314
>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
protein 10, isoform b protein.
Length = 1371
Score = 33.1 bits (72), Expect = 0.81
Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 10/143 (6%)
Query: 333 QNALISQHANAISHLTQQTKSTFEN---YQSQHQAFVGHTMQQIQQLEMQKHALEMQKTX 389
QN +QH N +H Q ++ +N Q+ HQ H QQ + MQ+ + +
Sbjct: 201 QNQNSNQHPNQ-NHNQNQMQNPHQNQNHVQNNHQGANNH--QQNNRRAMQQQPMSQNQAN 257
Query: 390 XXXXXXXXSNMGNFHNSNFSDIGYPQMGGYD-QNFNANSNSQQYGSESGDNYPTNNSIS- 447
N HN N + Q G + Q N + +Q + Y N +
Sbjct: 258 QINQMNQNQNQQQSHNQNMTQNQRNQTGPQNQQRTNDSRTMKQTPQQQPSQYQNNVGAAH 317
Query: 448 --GNENSYDSQIFEQIAKQKKEN 468
N++ Q +Q+ +Q+ +N
Sbjct: 318 QHHNQHGQQEQHHQQMNEQRTDN 340
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 33.1 bits (72), Expect = 0.81
Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 10/143 (6%)
Query: 333 QNALISQHANAISHLTQQTKSTFEN---YQSQHQAFVGHTMQQIQQLEMQKHALEMQKTX 389
QN +QH N +H Q ++ +N Q+ HQ H QQ + MQ+ + +
Sbjct: 201 QNQNSNQHPNQ-NHNQNQMQNPHQNQNHVQNNHQGANNH--QQNNRRAMQQQPMSQNQAN 257
Query: 390 XXXXXXXXSNMGNFHNSNFSDIGYPQMGGYD-QNFNANSNSQQYGSESGDNYPTNNSIS- 447
N HN N + Q G + Q N + +Q + Y N +
Sbjct: 258 QINQMNQNQNQQQSHNQNMTQNQRNQTGPQNQQRTNDSRTMKQTPQQQPSQYQNNVGAAH 317
Query: 448 --GNENSYDSQIFEQIAKQKKEN 468
N++ Q +Q+ +Q+ +N
Sbjct: 318 QHHNQHGQQEQHHQQMNEQRTDN 340
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 33.1 bits (72), Expect = 0.81
Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 10/143 (6%)
Query: 333 QNALISQHANAISHLTQQTKSTFEN---YQSQHQAFVGHTMQQIQQLEMQKHALEMQKTX 389
QN +QH N +H Q ++ +N Q+ HQ H QQ + MQ+ + +
Sbjct: 201 QNQNSNQHPNQ-NHNQNQMQNPHQNQNHVQNNHQGANNH--QQNNRRAMQQQPMSQNQAN 257
Query: 390 XXXXXXXXSNMGNFHNSNFSDIGYPQMGGYD-QNFNANSNSQQYGSESGDNYPTNNSIS- 447
N HN N + Q G + Q N + +Q + Y N +
Sbjct: 258 QINQMNQNQNQQQSHNQNMTQNQRNQTGPQNQQRTNDSRTMKQTPQQQPSQYQNNVGAAH 317
Query: 448 --GNENSYDSQIFEQIAKQKKEN 468
N++ Q +Q+ +Q+ +N
Sbjct: 318 QHHNQHGQQEQHHQQMNEQRTDN 340
>Z11505-7|CAA77581.1| 918|Caenorhabditis elegans Hypothetical
protein F59B2.12 protein.
Length = 918
Score = 32.7 bits (71), Expect = 1.1
Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 11/124 (8%)
Query: 328 SYQDYQNALISQHANAISHLTQQTKSTFENYQSQHQAFVGHTMQQIQQLEMQKHALEMQK 387
S D NA H+N S Q K + +NY + + G LE K+A
Sbjct: 240 SVGDSHNAASDAHSNFESLDAQGNKKS-QNYSKKAASASGSNADFESNLESLKNA----- 293
Query: 388 TXXXXXXXXXSNMGNFHNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGDNYPTNNSIS 447
++ GNF+N+++ ++ +N NA+ S S +G N NS S
Sbjct: 294 ----DGTSMSNSTGNFNNTSYDKATAEEVMS-KKNVNADGTSSMEASHAGSNSSKINSAS 348
Query: 448 GNEN 451
G +
Sbjct: 349 GQSS 352
>U55364-5|AAQ23124.1| 368|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 31,
isoform b protein.
Length = 368
Score = 32.7 bits (71), Expect = 1.1
Identities = 39/141 (27%), Positives = 54/141 (38%), Gaps = 12/141 (8%)
Query: 317 AVIEKMKSPTSSYQDYQNALISQHAN-AISHLTQQTKSTFENYQSQHQAFVGHTMQQIQQ 375
AV + +S S+ Q YQ + +Q+ S L +T + Q G T Q Q
Sbjct: 13 AVAAQQQSAYSTNQQYQPSQGAQYDQYGSSTLQYNNGATAQPIQYNQNQQYGSTAQYNQN 72
Query: 376 LEMQKHALEMQKTXXXXXXXXXSNMGNFHNSNFSDIGYPQMGGYDQNFNANSNSQQYGSE 435
+MQ SNM N NSN G G ++A N Q G +
Sbjct: 73 --------QMQNQQNSNQYSTTSNMNNQQNSNQYQQGQQNNYGTQAQYDAGQN--QMG-Q 121
Query: 436 SGDNYPTNNSISGNENSYDSQ 456
SG +N+ N+NS SQ
Sbjct: 122 SGQVQGYSNNGYSNQNSQMSQ 142
Score = 30.7 bits (66), Expect = 4.3
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Query: 349 QQTKSTFENYQSQHQAFVGHTMQ-QIQQLEMQKHALEMQKTXXXXXXXXXSNMGNFHNSN 407
QQ + +Q+Q G Q Q QQ Q + Q+T G++ +N
Sbjct: 274 QQANQNGQYQNTQYQQQNGQNGQNQFQQSNGQNQNSQYQQTSNQQMNNQQYQTGDYQQTN 333
Query: 408 FSDIGYPQMGGYDQNFNANSNSQQ 431
+G P G N N N+QQ
Sbjct: 334 TQSMGSPNTGTQQSN-NQQMNAQQ 356
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 32.3 bits (70), Expect = 1.4
Identities = 21/82 (25%), Positives = 32/82 (39%)
Query: 373 IQQLEMQKHALEMQKTXXXXXXXXXSNMGNFHNSNFSDIGYPQMGGYDQNFNANSNSQQY 432
+QQ Q+ A + Q + GN +N Q GGY+Q N N QY
Sbjct: 128 MQQCTQQQTAQQCQPICQQQCQQECGSTGNMMYNNQDPYNQMQYGGYNQQGNQYQNQNQY 187
Query: 433 GSESGDNYPTNNSISGNENSYD 454
+ + N + N+N Y+
Sbjct: 188 QNPNQIQNQYNQNQYQNQNYYN 209
>Z73906-11|CAD36485.1| 136|Caenorhabditis elegans Hypothetical
protein D2030.11 protein.
Length = 136
Score = 32.3 bits (70), Expect = 1.4
Identities = 17/66 (25%), Positives = 32/66 (48%)
Query: 289 SIAVTEEQEAKLNKLLRLWESKSNYFETAVIEKMKSPTSSYQDYQNALISQHANAISHLT 348
S+ + E + K++KL E F + ++PTS + + L+SQH +A+
Sbjct: 50 SVKMDEAVQRKMSKLDEKSEQLDKIFRCLMSMSSEAPTSQNFEEDSELVSQHLSALKAFL 109
Query: 349 QQTKST 354
+ +ST
Sbjct: 110 RSDRST 115
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 31.9 bits (69), Expect = 1.9
Identities = 53/282 (18%), Positives = 127/282 (45%), Gaps = 20/282 (7%)
Query: 121 VNSAPPPLPQHPQEIDSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKA-- 178
VN A + + D +T + ++ ++ +S+ L ++ +++ + E ++KA
Sbjct: 64 VNEAKALREEIQAKYDDVTQKAERIQGELEESKKVLESEKQAFENEKEQEREEQLAKAME 123
Query: 179 QMESLQIMADENNINLSELDNIL---QPIIDSCTKDSISSGKGWILQHATSHDAGKVI-- 233
++ S Q + DE L + + + + I T+ S K K +
Sbjct: 124 KLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDS 183
Query: 234 SQHLLRKVTQTGAAFTQKLHIIYLVNDVLHHCARKNAEDLKKNLENVVVPMFCNASIAVT 293
S+ L++ + A +L D ++ E+++KN+ +V V +
Sbjct: 184 SETSLKEFSDMIEAMKIQLINCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLLLESTTS 243
Query: 294 E-EQEAKLNKLLR--LWESKSNYFETAVIEKMKSPTSSYQDYQNALISQHANAISHLTQQ 350
E +Q A+ ++++ L E++S+ IE +K + ++ + AL S ++AIS +T+Q
Sbjct: 244 EMKQHAEAAEIVKKQLEEAQSS------IENLKKDAENERNLKTALESDESSAISEITKQ 297
Query: 351 TKSTFENYQS--QHQAFVGHTMQQIQQLEM--QKHALEMQKT 388
++ + ++ + ++ + M ++Q++ Q+ ++QKT
Sbjct: 298 MEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKT 339
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 31.9 bits (69), Expect = 1.9
Identities = 53/282 (18%), Positives = 127/282 (45%), Gaps = 20/282 (7%)
Query: 121 VNSAPPPLPQHPQEIDSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKA-- 178
VN A + + D +T + ++ ++ +S+ L ++ +++ + E ++KA
Sbjct: 64 VNEAKALREEIQAKYDDVTQKAERIQGELEESKKVLESEKQAFENEKEQEREEQLAKAME 123
Query: 179 QMESLQIMADENNINLSELDNIL---QPIIDSCTKDSISSGKGWILQHATSHDAGKVI-- 233
++ S Q + DE L + + + + I T+ S K K +
Sbjct: 124 KLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDS 183
Query: 234 SQHLLRKVTQTGAAFTQKLHIIYLVNDVLHHCARKNAEDLKKNLENVVVPMFCNASIAVT 293
S+ L++ + A +L D ++ E+++KN+ +V V +
Sbjct: 184 SETSLKEFSDMIEAMKIQLINCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLLLESTTS 243
Query: 294 E-EQEAKLNKLLR--LWESKSNYFETAVIEKMKSPTSSYQDYQNALISQHANAISHLTQQ 350
E +Q A+ ++++ L E++S+ IE +K + ++ + AL S ++AIS +T+Q
Sbjct: 244 EMKQHAEAAEIVKKQLEEAQSS------IENLKKDAENERNLKTALESDESSAISEITKQ 297
Query: 351 TKSTFENYQS--QHQAFVGHTMQQIQQLEM--QKHALEMQKT 388
++ + ++ + ++ + M ++Q++ Q+ ++QKT
Sbjct: 298 MEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKT 339
>AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical
protein Y53F4B.13 protein.
Length = 927
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 746 QMLQKMGWSAG-GLGASGQGIAEPISGGFVRDR 777
+++ MG AG GLG GQGI+EPI+ R R
Sbjct: 92 RLMAAMGHKAGEGLGKHGQGISEPIASSTQRGR 124
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 31.9 bits (69), Expect = 1.9
Identities = 31/112 (27%), Positives = 42/112 (37%), Gaps = 5/112 (4%)
Query: 384 EMQKTXXXXXXXXXSNMGNFHNSNFSDIGYPQMGGYDQNF-NANSNSQQYGSESGDNYPT 442
E+ T N GN N+N S G G + N NSNS S +G+
Sbjct: 190 ELVVTNPGSVGSGSGNSGNSSNNNNSS-GNSNYGSNNSGSGNGNSNSGNGNSGNGNGNNA 248
Query: 443 NNSISGNENSYDSQIFEQIAKQKKENIEDPDLSN---LPNVNFSVPPPGFKP 491
NS +GN NS + N + +N P + VPP G+ P
Sbjct: 249 GNSGNGNGNSNGNNGNGSNGNGNGNNGNGNNGNNGNGHPQYPYPVPPHGYYP 300
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 31.5 bits (68), Expect = 2.5
Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Query: 125 PPPLPQHPQEIDSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQ 184
PPP P P+++ +QIT+ + + + +Q+ +I+ L +A +
Sbjct: 6458 PPPQPAEPEQLAEYEATKESEHQQITEGDVPQEEEETEMRRQETERIHSLAMEASSDLGN 6517
Query: 185 IMADENNINLSELDNILQPIIDSCTK-DSISSGKGWILQHATSHDAGK 231
+ + LS+L + + D+ + +S SG L+ + AGK
Sbjct: 6518 SESSRYSRQLSDLSSSAESHADTVIRVESERSGSSDSLEVVSVISAGK 6565
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 31.5 bits (68), Expect = 2.5
Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Query: 125 PPPLPQHPQEIDSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQ 184
PPP P P+++ +QIT+ + + + +Q+ +I+ L +A +
Sbjct: 6458 PPPQPAEPEQLAEYEATKESEHQQITEGDVPQEEEETEMRRQETERIHSLAMEASSDLGN 6517
Query: 185 IMADENNINLSELDNILQPIIDSCTK-DSISSGKGWILQHATSHDAGK 231
+ + LS+L + + D+ + +S SG L+ + AGK
Sbjct: 6518 SESSRYSRQLSDLSSSAESHADTVIRVESERSGSSDSLEVVSVISAGK 6565
>U21733-1|AAB38384.1| 869|Caenorhabditis elegans UNC-44 protein.
Length = 869
Score = 31.5 bits (68), Expect = 2.5
Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Query: 125 PPPLPQHPQEIDSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQ 184
PPP P P+++ +QIT+ + + + +Q+ +I+ L +A +
Sbjct: 333 PPPQPAEPEQLAEYEATKESEHQQITEGDVPQEEEETEMRRQETERIHSLAMEASSDLGN 392
Query: 185 IMADENNINLSELDNILQPIIDSCTK-DSISSGKGWILQHATSHDAGK 231
+ + LS+L + + D+ + +S SG L+ + AGK
Sbjct: 393 SESSRYSRQLSDLSSSAESHADTVIRVESERSGSSDSLEVVSVISAGK 440
>AL023493-2|CAD44137.1| 909|Caenorhabditis elegans Hypothetical
protein H20J18.1b protein.
Length = 909
Score = 31.5 bits (68), Expect = 2.5
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 320 EKMKSPTSSYQDY-QNALISQHANAISHLTQQTKSTFENYQSQHQAFVGHTMQQIQQLEM 378
++++ P Q+ Q LI Q N I QQ + Q Q QA QQ+QQL
Sbjct: 419 QQLQGPQGQAQNQMQQQLIQQQLNQILARNQQQQQQQMQQQLQQQASNNALQQQLQQLVE 478
Query: 379 QKHALEMQK 387
Q+ + Q+
Sbjct: 479 QQRQQQQQQ 487
>AL023493-1|CAA18898.1| 947|Caenorhabditis elegans Hypothetical
protein H20J18.1a protein.
Length = 947
Score = 31.5 bits (68), Expect = 2.5
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 320 EKMKSPTSSYQDY-QNALISQHANAISHLTQQTKSTFENYQSQHQAFVGHTMQQIQQLEM 378
++++ P Q+ Q LI Q N I QQ + Q Q QA QQ+QQL
Sbjct: 419 QQLQGPQGQAQNQMQQQLIQQQLNQILARNQQQQQQQMQQQLQQQASNNALQQQLQQLVE 478
Query: 379 QKHALEMQK 387
Q+ + Q+
Sbjct: 479 QQRQQQQQQ 487
>Z68319-3|CAA92701.1| 339|Caenorhabditis elegans Hypothetical
protein T23G7.3 protein.
Length = 339
Score = 31.1 bits (67), Expect = 3.3
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Query: 739 DSTNKGHQMLQKMGWSAG-GLGASGQGIAEPI------SG-GFVRDRQDQYKGVGVSLND 790
D ++++KMGWS G GLG + QG A+ + SG G D+ Y +S +D
Sbjct: 25 DDQKLSKKLMEKMGWSEGDGLGRNRQGNADSVKLKANTSGRGLGADKMADYDSTWISHHD 84
Query: 791 PY 792
+
Sbjct: 85 DF 86
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 31.1 bits (67), Expect = 3.3
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 744 GHQMLQKMGWSAG-GLGASGQGIAEPISGGFVRDRQ 778
G ML+KMGW G GLG G EP+ DR+
Sbjct: 641 GRLMLEKMGWRPGEGLGKDATGNLEPLMLDVKSDRK 676
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 621 RQKSKSPSPIPK--DLQKQPTPPGRRYRSRSKTPEPNI 656
+Q+S+SP P + D + +PP R YR R ++ P +
Sbjct: 150 QQRSRSPPPAKRRRDQSRSKSPPRRNYRQRQRSGSPPV 187
Score = 30.7 bits (66), Expect = 4.3
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Query: 621 RQKSKSPSPIPKDLQKQPTPP---GRRYRSRSKTP 652
RQ S+S SP P+ Q+ +PP RR +SRSK+P
Sbjct: 137 RQVSRSRSPPPRRQQRSRSPPPAKRRRDQSRSKSP 171
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 30.7 bits (66), Expect = 4.3
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 603 KAKNSARKMKEDAIAQGYRQKSKSPSPIPKDLQKQPTPPGRRYRSRSKTPEP 654
++K+ +R A +KS+SPS PK + + P+PP R RS S+ P
Sbjct: 248 ESKSKSRSRSRSRSADN--RKSRSPSRSPKKVDRSPSPP-RGSRSPSEKGSP 296
>Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical
protein C05C10.2b protein.
Length = 1553
Score = 30.3 bits (65), Expect = 5.7
Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 279 NVVVPMFCNASIAVTEEQEAKLNKLLRLWESKSNYFETAVIEKMKSPTSSYQDYQNALIS 338
NV CN +V E L L E+K+N T + K S T +DY
Sbjct: 388 NVQFKFTCNGMASVVSTNEPMSVILNNLTEAKTNVEYTGIAFKSASYTVHTEDYTKKWYE 447
Query: 339 QHANAISHLTQQTK--STFENYQSQHQAFVGHTMQQ 372
+ IS++ K ST Y+ FV +Q
Sbjct: 448 RIQEEISNIMIYPKALSTIYQYEEYTPNFVVEKQEQ 483
>Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical
protein C05C10.2a protein.
Length = 1551
Score = 30.3 bits (65), Expect = 5.7
Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 279 NVVVPMFCNASIAVTEEQEAKLNKLLRLWESKSNYFETAVIEKMKSPTSSYQDYQNALIS 338
NV CN +V E L L E+K+N T + K S T +DY
Sbjct: 388 NVQFKFTCNGMASVVSTNEPMSVILNNLTEAKTNVEYTGIAFKSASYTVHTEDYTKKWYE 447
Query: 339 QHANAISHLTQQTK--STFENYQSQHQAFVGHTMQQ 372
+ IS++ K ST Y+ FV +Q
Sbjct: 448 RIQEEISNIMIYPKALSTIYQYEEYTPNFVVEKQEQ 483
>U97005-4|AAB52283.1| 314|Caenorhabditis elegans Hypothetical
protein F19F10.5 protein.
Length = 314
Score = 30.3 bits (65), Expect = 5.7
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 282 VPMFCNASIAVTEEQEAKLNKLLRLWESKSNYFETAVIEKMKSPTSSYQDYQN--ALISQ 339
VP+F ++ + E+ L S SN + SPTSS +D N LI
Sbjct: 211 VPLFSIENLLASSEETTSNFSLQSSPSSSSNSSSARTMSATSSPTSSLEDVINPPVLIDP 270
Query: 340 HANAISHLTQQTKST 354
++H+TQ +T
Sbjct: 271 FQMQMAHITQTFLAT 285
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 30.3 bits (65), Expect = 5.7
Identities = 14/54 (25%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 135 IDSITTQINVLKEQITQSENNLNAQHAVLIQQQ-QVKI-NELVSKAQMESLQIM 186
I+++ +++ K ++ ++EN ++ H QQ+ Q + N+LV+K ++L++M
Sbjct: 65 IENLMSELKTAKSKLNETENQISDLHEATKQQESQANLWNDLVAKISDKNLEMM 118
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 30.3 bits (65), Expect = 5.7
Identities = 51/235 (21%), Positives = 98/235 (41%), Gaps = 30/235 (12%)
Query: 134 EIDSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSK---------AQMESLQ 184
EI+ + + +N LK ++ + NA+ A L + Q NE+ A + ++
Sbjct: 54 EINRLKSDVNSLKRELEAEKIASNAEAARLKSELQKAKNEIQDSIKDGDSEKDAMEQEIE 113
Query: 185 IMADENNINLSELDNILQPIIDSCTKDSISSGKGWILQHATSHDAGKVISQHLLRKVTQT 244
+ + NI + L +++ DS D +S + D K +S + + Q
Sbjct: 114 NLQRQLNIKTASLQSLMLAKSDSSKTDKLSEENETL--KLKVEDLQKQVSSFMSQ--MQD 169
Query: 245 GAAFTQKLHIIYLVNDVLHHCARKNAEDLKKNLENVVVPMFCNASIAVTEEQEAKLNKLL 304
+ QK+ VNDV +R+N + L + L + + EEQ+ K ++L
Sbjct: 170 KNSEIQKMKDAISVNDV----SRQNMDSLSEKLSEM--------DRTLREEQQQK-SQLR 216
Query: 305 RLWESKSNYFET--AVIEKMKSPTSSYQDYQNALISQHANAISHLTQQTKSTFEN 357
E+ N T + + +K + ++ QNAL ++ NA + + FE+
Sbjct: 217 SQTETLKNALSTSESTLSMLKDKLAQFE--QNALDLKNENAQMKTSTRESILFES 269
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 30.3 bits (65), Expect = 5.7
Identities = 51/235 (21%), Positives = 98/235 (41%), Gaps = 30/235 (12%)
Query: 134 EIDSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSK---------AQMESLQ 184
EI+ + + +N LK ++ + NA+ A L + Q NE+ A + ++
Sbjct: 54 EINRLKSDVNSLKRELEAEKIASNAEAARLKSELQKAKNEIQDSIKDGDSEKDAMEQEIE 113
Query: 185 IMADENNINLSELDNILQPIIDSCTKDSISSGKGWILQHATSHDAGKVISQHLLRKVTQT 244
+ + NI + L +++ DS D +S + D K +S + + Q
Sbjct: 114 NLQRQLNIKTASLQSLMLAKSDSSKTDKLSEENETL--KLKVEDLQKQVSSFMSQ--MQD 169
Query: 245 GAAFTQKLHIIYLVNDVLHHCARKNAEDLKKNLENVVVPMFCNASIAVTEEQEAKLNKLL 304
+ QK+ VNDV +R+N + L + L + + EEQ+ K ++L
Sbjct: 170 KNSEIQKMKDAISVNDV----SRQNMDSLSEKLSEM--------DRTLREEQQQK-SQLR 216
Query: 305 RLWESKSNYFET--AVIEKMKSPTSSYQDYQNALISQHANAISHLTQQTKSTFEN 357
E+ N T + + +K + ++ QNAL ++ NA + + FE+
Sbjct: 217 SQTETLKNALSTSESTLSMLKDKLAQFE--QNALDLKNENAQMKTSTRESILFES 269
>Z92831-7|CAB07365.2| 355|Caenorhabditis elegans Hypothetical
protein F22G12.1 protein.
Length = 355
Score = 29.9 bits (64), Expect = 7.6
Identities = 14/56 (25%), Positives = 30/56 (53%)
Query: 333 QNALISQHANAISHLTQQTKSTFENYQSQHQAFVGHTMQQIQQLEMQKHALEMQKT 388
+ A +H AI L + K+ + +S+ ++ + ++++E Q+ ALE Q+T
Sbjct: 68 RKAAEERHNKAIEELKRSHKNDKKKLESELESIKRKGEKDVREIEQQREALEKQRT 123
>Z92777-12|CAJ58496.1| 355|Caenorhabditis elegans Hypothetical
protein F22G12.1 protein.
Length = 355
Score = 29.9 bits (64), Expect = 7.6
Identities = 14/56 (25%), Positives = 30/56 (53%)
Query: 333 QNALISQHANAISHLTQQTKSTFENYQSQHQAFVGHTMQQIQQLEMQKHALEMQKT 388
+ A +H AI L + K+ + +S+ ++ + ++++E Q+ ALE Q+T
Sbjct: 68 RKAAEERHNKAIEELKRSHKNDKKKLESELESIKRKGEKDVREIEQQREALEKQRT 123
>Z81085-1|CAB03112.3| 263|Caenorhabditis elegans Hypothetical
protein F46F3.1 protein.
Length = 263
Score = 29.9 bits (64), Expect = 7.6
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 120 AVNSAPPPLPQHPQEIDSITTQINVLKEQITQSENNL--NAQHAVLIQQQQVKINELVSK 177
A +AP P+ HPQ + Q N L +T +N + + VL QQV + L K
Sbjct: 59 AYATAPYPMATHPQLANFNRFQTNQLNLGLTTQQNMMISRRKRRVLFSPQQVHV--LERK 116
Query: 178 AQMESLQIMADENNI 192
Q+ AD N+
Sbjct: 117 FQINRYLSAADRENL 131
>Z68114-1|CAA92152.1| 451|Caenorhabditis elegans Hypothetical
protein F17A2.1 protein.
Length = 451
Score = 29.9 bits (64), Expect = 7.6
Identities = 18/74 (24%), Positives = 34/74 (45%)
Query: 143 NVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQIMADENNINLSELDNILQ 202
N +I +S + L QQ+V+ +E S ++ + +E+ + E D +Q
Sbjct: 154 NYASAKIGESSRVIRKSPRFLRAQQKVEDDECSSDESLDDSETSEEEDVDSDGECDEEVQ 213
Query: 203 PIIDSCTKDSISSG 216
++DS K I+ G
Sbjct: 214 AVLDSLEKKKITDG 227
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein
C50C3.2 protein.
Length = 2107
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 267 RKNAEDLKKNLENVVVPMFCNASIAVTEEQEAKLNKLLRLWESKSNYFETA 317
+K + +K+++E C+ I EQE K+ L+R + SN+ TA
Sbjct: 1629 KKMHQKIKESIEFTKFVSTCDTGIQCIREQEEKIGNLVRHQKPASNFENTA 1679
>AC024756-5|AAK29880.3| 414|Caenorhabditis elegans Hypothetical
protein Y34D9A.7 protein.
Length = 414
Score = 29.9 bits (64), Expect = 7.6
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 576 DAFFASPNHERPRDNEGWEKLGLYEYYKAKNSARKMKEDAIAQGYRQKSKSPSPIPKDLQ 635
D F E RD+EG EK+ + E ++ RK++E + +Q+ S + K++
Sbjct: 251 DIFCEMLQTEVARDHEGTEKIRIREERHQRSELRKIREQQKEEEEQQQRDSAEKVEKEVT 310
Query: 636 KQPT 639
T
Sbjct: 311 VDQT 314
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.312 0.129 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,066,093
Number of Sequences: 27539
Number of extensions: 744129
Number of successful extensions: 2739
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 2642
Number of HSP's gapped (non-prelim): 113
length of query: 816
length of database: 12,573,161
effective HSP length: 87
effective length of query: 729
effective length of database: 10,177,268
effective search space: 7419228372
effective search space used: 7419228372
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 64 (29.9 bits)
- SilkBase 1999-2023 -