Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000242-TA|BGIBMGA000242-PA|IPR010703|Dedicator of
cytokinesis
         (754 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    25   1.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    25   1.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    25   1.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   3.3  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    23   7.7  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 135 MYLRYVYKLHD-LHIASDNFVEAGCTLLLYAETLSWDSDQTGVDSEHPDTPEWKRKEALY 193
           + L+++   H  + + +D FV    T L Y  T   D  Q+  +S++     WK     Y
Sbjct: 214 LVLQFITLQHTFIWVFNDVFVMLLSTALAYRFTQVTDRTQSMSESKNKSESAWKNLREDY 273

Query: 194 NQVLQYFDR 202
           N++ +   R
Sbjct: 274 NRLCRLCKR 282


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 135 MYLRYVYKLHD-LHIASDNFVEAGCTLLLYAETLSWDSDQTGVDSEHPDTPEWKRKEALY 193
           + L+++   H  + + +D FV    T L Y  T   D  Q+  +S++     WK     Y
Sbjct: 214 LVLQFITLQHTFIWVFNDVFVMLLSTALAYRFTQVTDRTQSMSESKNKSESAWKNLREDY 273

Query: 194 NQVLQYFDR 202
           N++ +   R
Sbjct: 274 NRLCRLCKR 282


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 135 MYLRYVYKLHD-LHIASDNFVEAGCTLLLYAETLSWDSDQTGVDSEHPDTPEWKRKEALY 193
           + L+++   H  + + +D FV    T L Y  T   D  Q+  +S++     WK     Y
Sbjct: 214 LVLQFITLQHTFIWVFNDVFVMLLSTALAYRFTQVTDRTQSMSESKNKSESAWKNLREDY 273

Query: 194 NQVLQYFDR 202
           N++ +   R
Sbjct: 274 NRLCRLCKR 282


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 178  SEHPDTPEWKRKEALYNQVLQYFDRGKCWEKGL 210
            SE P  PE  + ++ Y +++ YF     + KGL
Sbjct: 1382 SEKPPLPEELKPQSGYFKIVCYFTNWAWYRKGL 1414


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 586 SASLPVCDNRDCNDDGSMVKSAPPLPTRPKSGDPRSPTR 624
           SAS P    RD ++D S     P L  +  SG  +   R
Sbjct: 6   SASNPAVSERDPDEDNSEDSKDPHLTDQQASGHKKRKRR 44


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.135    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,267
Number of Sequences: 317
Number of extensions: 7395
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 5
length of query: 754
length of database: 114,650
effective HSP length: 62
effective length of query: 692
effective length of database: 94,996
effective search space: 65737232
effective search space used: 65737232
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)