Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000242-TA|BGIBMGA000242-PA|IPR010703|Dedicator of
cytokinesis
(754 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0870 + 11964135-11964224,11965013-11965175,11965262-119653... 66 7e-11
02_03_0223 + 16570264-16570357,16570470-16570552,16570974-165710... 33 0.84
10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595 30 5.9
02_03_0272 - 17146578-17146691,17146806-17146926,17147260-171473... 30 5.9
12_01_0433 - 3402250-3402536,3402644-3403030,3403523-3403957,340... 30 7.8
11_06_0632 + 25674807-25675477,25676472-25677861,25677948-256780... 30 7.8
04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476 30 7.8
>03_02_0870 + 11964135-11964224,11965013-11965175,11965262-11965380,
11965971-11966083,11966179-11966234,11966320-11966417,
11966588-11966725,11966820-11967125,11967208-11967471,
11967587-11967754,11967838-11968056,11968115-11968158,
11968761-11968830,11968949-11969110,11969672-11969779,
11969873-11969910,11970121-11970265,11970800-11970926,
11971037-11971230,11971529-11971659,11972014-11972089,
11972218-11972328,11972465-11972647,11973264-11973407,
11973946-11973969,11974555-11974728,11974808-11975155,
11975232-11975561,11975776-11975961,11976052-11977026,
11977145-11977399
Length = 1852
Score = 66.5 bits (155), Expect = 7e-11
Identities = 78/317 (24%), Positives = 123/317 (38%), Gaps = 25/317 (7%)
Query: 227 YARLAYCLRMNATFLDSVMEQ-LRPEP----EYFRVGFYGKGCPLFVRNKQFVYRGHEYE 281
Y LA C +S++EQ P P Y+RVGFYG+ + K++V+R
Sbjct: 1531 YGHLAKCHTSLKDIYESILEQEASPIPFIDATYYRVGFYGERFGK-LNKKEYVFREPRDV 1589
Query: 282 RIGAFTQRLQAEY---VSAHILMRNTPPDESVIANDGQ----YIQICNVKPVPARRSWPS 334
R+G ++L Y + + + P V A++ Q Y+QI V PV
Sbjct: 1590 RLGDIMEKLSHIYEAKMDGNHTLHIIPDSRQVNADELQPGVCYLQITAVDPV--MEDEDL 1647
Query: 335 GAPDQVKRYYACNDVDTFLCDRPLQKPPIDKDNE----FKSLWIERTTLVTESPLPGILR 390
G+ + + V + DR L P K+ + + W RT L TE P ++
Sbjct: 1648 GSRRERIFSLSTGTVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVLQTEGSFPALVN 1707
Query: 391 WSEVVSRSVEEIPPVEFACETMEATERELRSLISQ---YTADPMRNINPFSMRLQGTIDA 447
V+ E PVE A +E LR+ + + D + + LQG++
Sbjct: 1708 RLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQSLQRILQGSVAV 1767
Query: 448 NVQGGISKYEQAFLTSEFXXXXXXXXXXXXXXXXXLVGSQLAVVDAGLALHGRLAPDEVK 507
V G+ AFL+ E + +AV + +H RL +E +
Sbjct: 1768 QVNSGVLSVCTAFLSGE---PATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIGEEDQ 1824
Query: 508 PLHRRLVERFNQLRQNL 524
H +LV F L L
Sbjct: 1825 EFHTQLVNGFQSLTAEL 1841
>02_03_0223 +
16570264-16570357,16570470-16570552,16570974-16571032,
16571607-16571665,16572276-16572325,16573575-16573612,
16574619-16574695,16575593-16576503
Length = 456
Score = 33.1 bits (72), Expect = 0.84
Identities = 36/153 (23%), Positives = 56/153 (36%), Gaps = 8/153 (5%)
Query: 493 AGLALHGRLAPDEVKPLHRRLVERFNQLRQNLGPGLARARRQLSESIVNTPLPPVPALDK 552
+ + + G + P K L R + Q L L R R +L N+P PP
Sbjct: 142 SAVIIFGAVPPTRTK-LARGCCSTSSDFAQKLLLDLRRRRERLG---FNSPAPPQSTSSS 197
Query: 553 RSQSIQQTENYYEEGHFYDKPLS--VEDPLEQTTMSASLPVCDNRDCNDDGSMVKSAPPL 610
+ ++ + +G S P + + L GS ++ APP
Sbjct: 198 NAAALLRCPTLPRKGRAASNTFSDCTPPPPRRPSRRGCLSWRPTMTRRASGSSLRRAPPP 257
Query: 611 PTRPKSGDPRSPTRPSTDKYRYSKSDVIRCVMS 643
PT P+ G P +P + R + SD CV S
Sbjct: 258 PTSPRHG-ASDPAQPRHQERRLA-SDHYSCVPS 288
>10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595
Length = 514
Score = 30.3 bits (65), Expect = 5.9
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
Query: 536 SESIVNTPLPPVPALDKRSQ-SIQQTENYYEEGHFYDKPLSVEDPLEQTTMSASLPVCDN 594
S++ TP P + + RS+ + Y GHF S+ P+ T+ S+PV
Sbjct: 247 SDAASQTPFRPTESPNPRSRFPAAEAAPYVPVGHFRMPCHSMAPPV---TVRTSIPVFSA 303
Query: 595 RDCNDDGSMVKSAPPLPTRPKSGDPRSPTR 624
G+ + PPL + P SP R
Sbjct: 304 PPLPPPGARTQQLPPLMSHPPPIRMASPVR 333
>02_03_0272 -
17146578-17146691,17146806-17146926,17147260-17147365,
17147469-17147551,17147688-17147815,17147897-17147983,
17148064-17148174,17148502-17148669,17148753-17148837,
17148921-17149037,17149127-17149203,17149299-17149370,
17150538-17150634,17150750-17150952,17151115-17151217,
17151324-17151391,17151461-17151514,17151595-17151704,
17151982-17152060,17152171-17152233,17153410-17153529,
17153913-17153969,17154071-17154187,17156426-17156476,
17156591-17156689,17156787-17156935,17158090-17158312
Length = 953
Score = 30.3 bits (65), Expect = 5.9
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 527 GLARARRQLSESIVNTP----LPPVPALDKRSQS 556
G RA +L ES+ ++P LPP P +D R+Q+
Sbjct: 31 GFGRAAAELDESVASSPASFLLPPAPPVDARAQA 64
>12_01_0433 -
3402250-3402536,3402644-3403030,3403523-3403957,
3404071-3404562,3404718-3404821,3404913-3404994,
3405085-3405441,3405532-3406089,3406376-3406479,
3406575-3406650,3406764-3406898,3407192-3407494,
3407581-3408345,3409459-3412591,3412763-3412882
Length = 2445
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/90 (18%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 555 QSIQQTENYYEEGHFYDKPLSVEDPLEQTTMSASLPVCDNRDCNDDGSMVKSAPPLPTRP 614
+ ++ E+ + +G+ K L++++P +TT + +P+ +R+ G ++ P + R
Sbjct: 607 EMVRDEEHKHSKGNDPGKKLAIKEPARRTTRKSVVPIMFDRETK--GLAAETNPEVHVRR 664
Query: 615 KSGDPRSPTRPSTDKYRYSKSDVIRCVMSM 644
+ P P+++ +Y +++R V+ +
Sbjct: 665 STRKSVVPNMPNSEN-KY-HDELVRTVVGV 692
>11_06_0632 +
25674807-25675477,25676472-25677861,25677948-25678083,
25678185-25678282,25678470-25678535,25678699-25678827,
25679570-25679746,25680576-25680614
Length = 901
Score = 29.9 bits (64), Expect = 7.8
Identities = 34/115 (29%), Positives = 42/115 (36%), Gaps = 15/115 (13%)
Query: 525 GPGLARARRQLS----ESIVNTPLPPVPALDKRSQSIQQTENYYEEGHFYDKPLSVEDPL 580
G G R+R+ + E V T LD + +T + G Y P S DPL
Sbjct: 217 GSGPQRSRKIIDDNKDEPAVRTSKSTASVLDDDPFVVLETNS--ASGSTYPSPSSFMDPL 274
Query: 581 EQTTMSASLP------VCDNRDCNDDGSMVKSAP---PLPTRPKSGDPRSPTRPS 626
E SAS DN DD S P PL T +GD + PS
Sbjct: 275 EHLNNSASSKGKNVDNTTDNDSLPDDSSAFNQVPKSDPLFTSEFNGDTKYMNPPS 329
>04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476
Length = 676
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 710 EEIISMMSEPLRVGDDEIPPPIPPKGLGHISSFDSGHHVNGES 752
E +S+ S+ R DD +P P+P + I+SF H + +S
Sbjct: 25 ERKLSIQSDHRRTRDDAVPVPVPVPVVKPIASFSPSLHASEKS 67
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.135 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,282,030
Number of Sequences: 37544
Number of extensions: 963744
Number of successful extensions: 2706
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2703
Number of HSP's gapped (non-prelim): 8
length of query: 754
length of database: 14,793,348
effective HSP length: 88
effective length of query: 666
effective length of database: 11,489,476
effective search space: 7651991016
effective search space used: 7651991016
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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