GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000240-TA|BGIBMGA000240-PA|IPR011511|Variant SH3,
IPR001452|Src homology-3
         (110 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY752907-1|AAV30081.1|   97|Anopheles gambiae peroxidase 13A pro...    24   1.1  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   1.4  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          23   1.9  
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    22   4.4  
AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione S-tran...    21   7.7  

>AY752907-1|AAV30081.1|   97|Anopheles gambiae peroxidase 13A
          protein.
          Length = 97

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 38 ENGAWFRGFSTKNRSTWGIFPACVVSLRP 66
          ENG ++ G+S+ NR+  G+F    V   P
Sbjct: 32 ENGGYYSGYSSANRA--GMFAEVAVGAVP 58


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/31 (35%), Positives = 19/31 (61%)

Query: 78   AELKDDPLVREIACVLREWARLWKKLYVFRN 108
            AE+K+D +++ +  VLRE       ++V RN
Sbjct: 3325 AEIKEDFILQRLQSVLREHCATDSSVHVRRN 3355


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/45 (24%), Positives = 21/45 (46%)

Query: 10  LAVAVYNWKGDVRSGLPLEIGETVQILEENGAWFRGFSTKNRSTW 54
           +AV +++ + +       EI +T+ +  EN   F     K+  TW
Sbjct: 83  VAVKIFSSREECSWSREAEIYQTIMLRHENILGFIAADNKDNGTW 127


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative
          translation initiation factor protein.
          Length = 348

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 10 LAVAVYNWKGDVRSGLPLEIGETVQIL 36
          L V +Y+ + + ++ L  EIGE +Q L
Sbjct: 59 LVVEIYDKQYETKAALANEIGEHLQYL 85


>AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione
           S-transferase u1 protein.
          Length = 233

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)

Query: 41  AWFRGFSTKNRSTWGI 56
           AW+ GF   + S W I
Sbjct: 184 AWYDGFKQAHPSLWAI 199


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.137    0.455 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,839
Number of Sequences: 2123
Number of extensions: 4585
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 5
length of query: 110
length of database: 516,269
effective HSP length: 56
effective length of query: 54
effective length of database: 397,381
effective search space: 21458574
effective search space used: 21458574
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)