Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000239-TA|BGIBMGA000239-PA|IPR002007|Haem peroxidase,
animal, IPR010255|Haem peroxidase
         (429 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    25   1.2  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    25   1.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    25   1.6  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   2.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   8.7  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 154 DEIILGNSTGFRDIYDETVVPQIALEYAYAS 184
           +E+ L N TG++       VPQI LE+   S
Sbjct: 161 EEVCLENCTGYQQYLRLLEVPQINLEWGEGS 191


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 4/47 (8%)

Query: 164 FRDIYDETVVPQIALEYAYA--SRWFHTIQYGAQKLFDKNFNLIKEV 208
           FRD+ DE   P+  L  AY   S       YGA   F  NF  IK V
Sbjct: 270 FRDVLDEFPQPKHMLIEAYTNLSMTMKYYDYGAD--FPFNFAFIKNV 314


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 4/47 (8%)

Query: 164 FRDIYDETVVPQIALEYAYA--SRWFHTIQYGAQKLFDKNFNLIKEV 208
           FRD+ DE   P+  L  AY   S       YGA   F  NF  IK V
Sbjct: 270 FRDVLDEFPQPKHMLIEAYTNLSMTMKYYDYGAD--FPFNFAFIKNV 314


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 14/59 (23%), Positives = 22/59 (37%)

Query: 166 DIYDETVVPQIALEYAYASRWFHTIQYGAQKLFDKNFNLIKEVPMVNFSLSVQSLAIGD 224
           D + E V  +   EY Y     HT    A+ + +      K    + F L + +   GD
Sbjct: 316 DCHAEVVARRCLCEYLYKQLELHTEDRAAESILEPAKKGFKLKQGIQFHLYINTAPCGD 374


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 33/141 (23%), Positives = 53/141 (37%), Gaps = 11/141 (7%)

Query: 246 DPDISDIGLGPVQEV-FDIPTTDLAKG---RYFGLPSYTKYRDFCSGYSKKHVDFDD--L 299
           DPD  DI    V EV    PT D  +    ++F +P+ +     C G       F+   +
Sbjct: 241 DPDYFDIPNELVLEVPLSHPTYDWFEKLELKWFAVPAVSGMVFDCGGLEFTAAPFNGWYM 300

Query: 300 TDHISDEKIQQLKQVYETAEDIELMAGIWVENVI----EGAQVPPTVHCLLSNQLKRSII 355
           +  I    +  +++ Y   E I    G+          + A +   V  L S Q+K   I
Sbjct: 301 STEIGSRDLCDVQR-YNLLETIATHMGLDTRTSTSLWKDKAMIEANVAVLHSFQMKNVTI 359

Query: 356 IDRHWYERPNRPHAFNHEQLQ 376
           +D H        H  N  +L+
Sbjct: 360 VDHHTASESFMKHYENEMRLR 380


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.136    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,136
Number of Sequences: 429
Number of extensions: 5750
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 5
length of query: 429
length of database: 140,377
effective HSP length: 60
effective length of query: 369
effective length of database: 114,637
effective search space: 42301053
effective search space used: 42301053
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)