GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000238-TA|BGIBMGA000238-PA|IPR002007|Haem peroxidase,
animal, IPR010255|Haem peroxidase
         (485 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    27   0.35 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    27   0.35 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    25   1.9  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    24   2.5  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    22   10.0 

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 27.1 bits (57), Expect = 0.35
 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 4/47 (8%)

Query: 267 FRDIYDETVVPQIALEYAYA--SRWFHTIQYGAQKLFDKNFNFIKEV 311
           FRD+ DE   P+  L  AY   S       YGA   F  NF FIK V
Sbjct: 270 FRDVLDEFPQPKHMLIEAYTNLSMTMKYYDYGAD--FPFNFAFIKNV 314


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 27.1 bits (57), Expect = 0.35
 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 4/47 (8%)

Query: 267 FRDIYDETVVPQIALEYAYA--SRWFHTIQYGAQKLFDKNFNFIKEV 311
           FRD+ DE   P+  L  AY   S       YGA   F  NF FIK V
Sbjct: 270 FRDVLDEFPQPKHMLIEAYTNLSMTMKYYDYGAD--FPFNFAFIKNV 314


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 15/73 (20%), Positives = 26/73 (35%)

Query: 255 IEDEIILCNSTGFRDIYDETVVPQIALEYAYASRWFHTIQYGAQKLFDKNFNFIKEVPMV 314
           +  E +  +     D + E V  +   EY Y     HT    A+ + +      K    +
Sbjct: 302 VSGEHLSVSGGALNDCHAEVVARRCLCEYLYKQLELHTEDRAAESILEPAKKGFKLKQGI 361

Query: 315 NFTLSVQSLAVGD 327
            F L + +   GD
Sbjct: 362 QFHLYINTAPCGD 374


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 257 DEIILCNSTGFRDIYDETVVPQIALEYAYAS 287
           +E+ L N TG++       VPQI LE+   S
Sbjct: 161 EEVCLENCTGYQQYLRLLEVPQINLEWGEGS 191


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 6/18 (33%), Positives = 12/18 (66%)

Query: 256 EDEIILCNSTGFRDIYDE 273
           E  + +C  T F+D++D+
Sbjct: 75  EKGVCICRKTSFKDLWDK 92


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.137    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,577
Number of Sequences: 429
Number of extensions: 6863
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 5
length of query: 485
length of database: 140,377
effective HSP length: 60
effective length of query: 425
effective length of database: 114,637
effective search space: 48720725
effective search space used: 48720725
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)