GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000237-TA|BGIBMGA000237-PA|undefined
         (1018 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    30   0.27 
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    26   4.3  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    26   5.7  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 30.3 bits (65), Expect = 0.27
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 741  QTPTNASEMEYMNDIPRQSEPQHAKETIV 769
            +T   +SE EY ND+ R+  P H  ET V
Sbjct: 1405 ETEATSSEHEYYNDLQRELIPLHRNETTV 1433


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 26.2 bits (55), Expect = 4.3
 Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)

Query: 627 HNEPLEIEIPENKIEKCTKDNCEKSDSPSKCC 658
           H +PL+ E+ EN+  +C +     +D+   CC
Sbjct: 103 HPDPLD-ELYENRTAECLRKELSHADTTDCCC 133


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.8 bits (54), Expect = 5.7
 Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 760 EPQHAKETIVRDNQTHRELSPKTFVRVQKENTLIVNVAKIEDRISNLEAKRPERKTSRDK 819
           E   A   + + ++T+  L  +   RV+KE  +   + + ++ +S  E+K    K S DK
Sbjct: 328 ERDQAAGILAKHDETYDALKAE---RVEKEKLVKEEIKQYDELVSAKESKESTLKNSLDK 384

Query: 820 MNERQMKVKQVIE 832
             + Q  ++   E
Sbjct: 385 FAKVQANMRATNE 397


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.132    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 980,958
Number of Sequences: 2123
Number of extensions: 38668
Number of successful extensions: 102
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 99
Number of HSP's gapped (non-prelim): 5
length of query: 1018
length of database: 516,269
effective HSP length: 71
effective length of query: 947
effective length of database: 365,536
effective search space: 346162592
effective search space used: 346162592
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)