Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000237-TA|BGIBMGA000237-PA|undefined
(1018 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical ... 65 2e-10
AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical ... 65 2e-10
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 36 0.15
Z81016-2|CAB02663.1| 246|Caenorhabditis elegans Hypothetical pr... 33 1.4
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 32 2.4
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 32 2.4
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 32 2.4
Z81587-11|CAH10780.1| 483|Caenorhabditis elegans Hypothetical p... 31 3.1
Z81587-10|CAB04708.2| 511|Caenorhabditis elegans Hypothetical p... 31 3.1
U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linke... 31 5.5
U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linke... 31 5.5
AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-lin... 31 5.5
AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-lin... 31 5.5
U80023-3|AAG24039.1| 324|Caenorhabditis elegans Serpentine rece... 30 7.3
U40933-1|AAA81672.1| 699|Caenorhabditis elegans Bbs (bardet-bie... 30 7.3
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 30 9.6
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 30 9.6
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 30 9.6
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 30 9.6
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 30 9.6
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 30 9.6
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 30 9.6
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 30 9.6
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 30 9.6
>AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical
protein T04C4.1b protein.
Length = 893
Score = 65.3 bits (152), Expect = 2e-10
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 284 VEHSPQLQAMVCRLRLAILAAGTC-GAFVSTLHRAAEDAAKWLTDLMYGPRLQ-PMWLNL 341
++H P ++A + R ++ A F+ + ++ E+ + + L PRL+ P WL L
Sbjct: 367 MQHIPLIEAEMSRFESRVVTAALHPSTFLQNISKSWEELTETVCQLHNAPRLRHPYWLAL 426
Query: 342 VTSEKPGASNK-MAESLLSDLCSVLAVGDTKNTNFFISTLVTYVLTYHLGWVSTV-SP-- 397
+EK + +A L ++ D K +F+S LVT +L +H+ WV++V SP
Sbjct: 427 --NEKCHLDGRTLATEFCEQLAYLVRRYDRKEAGYFLSNLVTALLMHHMSWVASVASPPL 484
Query: 398 --YDS--EVHQTAATKLNDSKRP---YNVLWAQLNDLCGNIGFPPRAARTIISGTTNTQF 450
DS ++ + + + S P YN L AQ ++ G G R+A+ + G + +
Sbjct: 485 HNADSKDQIDENSLFGMMSSGAPTVGYNALMAQYLEISGACG-NMRSAKICVVG-EDLEV 542
Query: 451 VNRLLVILTYFIRCGEVKRTD 471
+ + +L++FIRC V+ D
Sbjct: 543 LASVCSVLSFFIRCSAVQHVD 563
Score = 40.7 bits (91), Expect = 0.005
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 59 PTFRQTDELPCIVEVTDGFSYLYKGPSSDASVLGEMIFGAVAMNCRNVSLKIHVMDEPRR 118
PT T + + F +L K D L +MIFGAV N S +IHV+++
Sbjct: 131 PTRNGTHQNASSISACGEFQFLRK--RKDTRKLSQMIFGAVPNLKTNESFRIHVLEDEET 188
Query: 119 LMCTKIFFVPTSRR 132
++ +K F +P R+
Sbjct: 189 ILVSKTFAIPKYRK 202
>AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical
protein T04C4.1a protein.
Length = 955
Score = 65.3 bits (152), Expect = 2e-10
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 284 VEHSPQLQAMVCRLRLAILAAGTC-GAFVSTLHRAAEDAAKWLTDLMYGPRLQ-PMWLNL 341
++H P ++A + R ++ A F+ + ++ E+ + + L PRL+ P WL L
Sbjct: 428 MQHIPLIEAEMSRFESRVVTAALHPSTFLQNISKSWEELTETVCQLHNAPRLRHPYWLAL 487
Query: 342 VTSEKPGASNK-MAESLLSDLCSVLAVGDTKNTNFFISTLVTYVLTYHLGWVSTV-SP-- 397
+EK + +A L ++ D K +F+S LVT +L +H+ WV++V SP
Sbjct: 488 --NEKCHLDGRTLATEFCEQLAYLVRRYDRKEAGYFLSNLVTALLMHHMSWVASVASPPL 545
Query: 398 --YDS--EVHQTAATKLNDSKRP---YNVLWAQLNDLCGNIGFPPRAARTIISGTTNTQF 450
DS ++ + + + S P YN L AQ ++ G G R+A+ + G + +
Sbjct: 546 HNADSKDQIDENSLFGMMSSGAPTVGYNALMAQYLEISGACG-NMRSAKICVVG-EDLEV 603
Query: 451 VNRLLVILTYFIRCGEVKRTD 471
+ + +L++FIRC V+ D
Sbjct: 604 LASVCSVLSFFIRCSAVQHVD 624
Score = 40.7 bits (91), Expect = 0.005
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 59 PTFRQTDELPCIVEVTDGFSYLYKGPSSDASVLGEMIFGAVAMNCRNVSLKIHVMDEPRR 118
PT T + + F +L K D L +MIFGAV N S +IHV+++
Sbjct: 192 PTRNGTHQNASSISACGEFQFLRK--RKDTRKLSQMIFGAVPNLKTNESFRIHVLEDEET 249
Query: 119 LMCTKIFFVPTSRR 132
++ +K F +P R+
Sbjct: 250 ILVSKTFAIPKYRK 263
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 35.9 bits (79), Expect = 0.15
Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 8/131 (6%)
Query: 708 KLDNYQFDPMIVPPIQEERCETCVKCQLMESLLQTPTNASEMEY----MNDIPRQSEPQH 763
KLD + ++ ++ E + + LQT E+EY M D + E Q+
Sbjct: 880 KLDQVIVERAVIQEQLQQESENSAELDDIRGRLQTRNQ--ELEYIVNDMRDRLSEEEQQN 937
Query: 764 AKETIVRDNQ--THRELSPKTFVRVQKENTLIVNVAKIEDRISNLEAKRPERKTSRDKMN 821
K R Q T R+L + Q L+++ ++ R+ NLE + E + + DK+
Sbjct: 938 EKNNDERRKQMETVRDLEEQLEQEEQARQKLLLDKTNVDQRLRNLEERLVELQDAYDKLL 997
Query: 822 ERQMKVKQVIE 832
+ + +++ +E
Sbjct: 998 KEKRLLEEKVE 1008
>Z81016-2|CAB02663.1| 246|Caenorhabditis elegans Hypothetical
protein F21G4.4 protein.
Length = 246
Score = 32.7 bits (71), Expect = 1.4
Identities = 34/152 (22%), Positives = 73/152 (48%), Gaps = 11/152 (7%)
Query: 693 LEILDRHYIGKPGNLKLDNYQFDPMIVPPIQEERCETCVKCQLMESLLQTPTNASEMEYM 752
LE L+R+ + G+L L F P P + C+TC++ L + A E+E M
Sbjct: 33 LEQLERY--PERGHLYLGPILFGP---EPYKLRACKTCIRLA-RHGLSASRFTAEEIENM 86
Query: 753 NDI-PRQSEPQHAKETIVRDNQTHRELSPKTFVRVQKENTLIVNVAKIEDRISNLEAKRP 811
++ P + Q ++E +L+ K ++Q ++ + A++ I + + +
Sbjct: 87 TELCPTHLDEQLSEERAKAKAALEAKLA-KQLKQMQAKHRKEIKEAEMAKTIRSTKKTKV 145
Query: 812 ER--KTSR-DKMNERQMKVKQVIEIPLQRLQV 840
+ K ++ DK + +K KQV+++P ++++
Sbjct: 146 GKNGKIAKVDKKTAKTVKEKQVLDLPQPKIEI 177
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 31.9 bits (69), Expect = 2.4
Identities = 21/91 (23%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 736 MESLLQTPTNASEMEYMNDIPRQSEPQHAKETIVR---DNQTHRELSPKTFVRVQKENTL 792
++ +L+ A E+E +ND + E AKE +R + + + + KT + E+T
Sbjct: 845 VKPMLKAGKEAEELEKINDKVKALEDSLAKEEKLRKELEESSAKLVEEKTSLFTNLESTK 904
Query: 793 IVNVAKIEDRISNLEAKRPERKTSRDKMNER 823
++ E+R++ LEA++ + ++N++
Sbjct: 905 -TQLSDAEERLAKLEAQQKDASKQLSELNDQ 934
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 31.9 bits (69), Expect = 2.4
Identities = 21/91 (23%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 736 MESLLQTPTNASEMEYMNDIPRQSEPQHAKETIVR---DNQTHRELSPKTFVRVQKENTL 792
++ +L+ A E+E +ND + E AKE +R + + + + KT + E+T
Sbjct: 845 VKPMLKAGKEAEELEKINDKVKALEDSLAKEEKLRKELEESSAKLVEEKTSLFTNLESTK 904
Query: 793 IVNVAKIEDRISNLEAKRPERKTSRDKMNER 823
++ E+R++ LEA++ + ++N++
Sbjct: 905 -TQLSDAEERLAKLEAQQKDASKQLSELNDQ 934
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 31.9 bits (69), Expect = 2.4
Identities = 21/91 (23%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 736 MESLLQTPTNASEMEYMNDIPRQSEPQHAKETIVR---DNQTHRELSPKTFVRVQKENTL 792
++ +L+ A E+E +ND + E AKE +R + + + + KT + E+T
Sbjct: 848 VKPMLKAGKEAEELEKINDKVKALEDSLAKEEKLRKELEESSAKLVEEKTSLFTNLESTK 907
Query: 793 IVNVAKIEDRISNLEAKRPERKTSRDKMNER 823
++ E+R++ LEA++ + ++N++
Sbjct: 908 -TQLSDAEERLAKLEAQQKDASKQLSELNDQ 937
>Z81587-11|CAH10780.1| 483|Caenorhabditis elegans Hypothetical
protein T06G6.3b protein.
Length = 483
Score = 31.5 bits (68), Expect = 3.1
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 758 QSEPQHAKETIVRDNQTHRELSPKTFVRVQKENTLIVNVAKIEDRISNLEAKRPERKTSR 817
+ E Q ET EL + +K+ +L + K+++RI + A+ PE++ +
Sbjct: 117 EMERQQTAETCEIITMLEAELEQEQADAKKKQKSLNREIEKLKERIEKMAAEEPEQEAKK 176
Query: 818 D--KMNERQMKVKQVIEIPL 835
D K N K+ + I +
Sbjct: 177 DVCKRNVNHFKLDETCPIQI 196
>Z81587-10|CAB04708.2| 511|Caenorhabditis elegans Hypothetical
protein T06G6.3a protein.
Length = 511
Score = 31.5 bits (68), Expect = 3.1
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 758 QSEPQHAKETIVRDNQTHRELSPKTFVRVQKENTLIVNVAKIEDRISNLEAKRPERKTSR 817
+ E Q ET EL + +K+ +L + K+++RI + A+ PE++ +
Sbjct: 145 EMERQQTAETCEIITMLEAELEQEQADAKKKQKSLNREIEKLKERIEKMAAEEPEQEAKK 204
Query: 818 D--KMNERQMKVKQVIEIPL 835
D K N K+ + I +
Sbjct: 205 DVCKRNVNHFKLDETCPIQI 224
>U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform b protein.
Length = 713
Score = 30.7 bits (66), Expect = 5.5
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 15/114 (13%)
Query: 131 RRISRGERKNDRREAESCSYLRNESKP------LNVP--TMNEEGALSLSSSMGRGDSDP 182
R +R ER + +S S + E KP L +P T+N E SS GR P
Sbjct: 519 RSTTRPERGSSSNSDDSSSEVEGEEKPEVRNNGLKIPQLTVNNENRGETSSQPGRDRLAP 578
Query: 183 PGRKLSISSNGSWQRR--TFQNMATRFDLGHKSSSSLSVPTA-FSNGTSATSCD 233
P + + S R+ T + TR K SS+ P A F+ G T +
Sbjct: 579 PNKTDTFLSASGVSRKISTISTVITR----EKVISSIFAPIAVFNRGRKQTKAE 628
>U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform a protein.
Length = 682
Score = 30.7 bits (66), Expect = 5.5
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 15/114 (13%)
Query: 131 RRISRGERKNDRREAESCSYLRNESKP------LNVP--TMNEEGALSLSSSMGRGDSDP 182
R +R ER + +S S + E KP L +P T+N E SS GR P
Sbjct: 488 RSTTRPERGSSSNSDDSSSEVEGEEKPEVRNNGLKIPQLTVNNENRGETSSQPGRDRLAP 547
Query: 183 PGRKLSISSNGSWQRR--TFQNMATRFDLGHKSSSSLSVPTA-FSNGTSATSCD 233
P + + S R+ T + TR K SS+ P A F+ G T +
Sbjct: 548 PNKTDTFLSASGVSRKISTISTVITR----EKVISSIFAPIAVFNRGRKQTKAE 597
>AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1a protein.
Length = 713
Score = 30.7 bits (66), Expect = 5.5
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 15/114 (13%)
Query: 131 RRISRGERKNDRREAESCSYLRNESKP------LNVP--TMNEEGALSLSSSMGRGDSDP 182
R +R ER + +S S + E KP L +P T+N E SS GR P
Sbjct: 519 RSTTRPERGSSSNSDDSSSEVEGEEKPEVRNNGLKIPQLTVNNENRGETSSQPGRDRLAP 578
Query: 183 PGRKLSISSNGSWQRR--TFQNMATRFDLGHKSSSSLSVPTA-FSNGTSATSCD 233
P + + S R+ T + TR K SS+ P A F+ G T +
Sbjct: 579 PNKTDTFLSASGVSRKISTISTVITR----EKVISSIFAPIAVFNRGRKQTKAE 628
>AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1b protein.
Length = 682
Score = 30.7 bits (66), Expect = 5.5
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 15/114 (13%)
Query: 131 RRISRGERKNDRREAESCSYLRNESKP------LNVP--TMNEEGALSLSSSMGRGDSDP 182
R +R ER + +S S + E KP L +P T+N E SS GR P
Sbjct: 488 RSTTRPERGSSSNSDDSSSEVEGEEKPEVRNNGLKIPQLTVNNENRGETSSQPGRDRLAP 547
Query: 183 PGRKLSISSNGSWQRR--TFQNMATRFDLGHKSSSSLSVPTA-FSNGTSATSCD 233
P + + S R+ T + TR K SS+ P A F+ G T +
Sbjct: 548 PNKTDTFLSASGVSRKISTISTVITR----EKVISSIFAPIAVFNRGRKQTKAE 597
>U80023-3|AAG24039.1| 324|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 30 protein.
Length = 324
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 124 IFFVPTSRRISRGERKNDRREAESCSYLRNESKPLNVPTMNEEGALS 170
I FVP R + G++K + E C +R+ ++ ++ N LS
Sbjct: 275 ILFVPHYRNVIIGKKKQPKPHPEMCGPIRSNTRTTSISVTNNSSHLS 321
>U40933-1|AAA81672.1| 699|Caenorhabditis elegans Bbs (bardet-biedl
syndrome) proteinprotein 2 protein.
Length = 699
Score = 30.3 bits (65), Expect = 7.3
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 21 ITSEQVRLLLFKECDWRGRKILFDSSSIQKVPAGKND--KPTFRQTDELPCIVEVTDG-F 77
+T +QV + + D G L S ++ KND + +TDE+ C+ V +G F
Sbjct: 162 VTGDQVTTMCLSDYDNDGETELVIGSPDFEIRVFKNDLMRTELMETDEITCLAHVANGCF 221
Query: 78 SYLYKGPSSDASVLGE 93
+Y + VL E
Sbjct: 222 AYSLNNGTIGTYVLKE 237
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 29.9 bits (64), Expect = 9.6
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 742 TPTNASEMEYMNDIPRQSEPQHAKETIVRDNQTHRELSPKTFVRVQKENTLIVNVAKIED 801
TP+ ++ D ++ + + KE R+ + RE+ K + + + ++ED
Sbjct: 758 TPSTSTHQAMFKDKEKERKKKE-KEKEEREREARREMKRKETKEERNKRKEMERAKRLED 816
Query: 802 RISNLEAKRPERKTSRDKMNERQMKVKQVIE 832
E KR E+K RD+ + + KV++ E
Sbjct: 817 --ERQERKR-EKKKERDERKKEKEKVRKKAE 844
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 29.9 bits (64), Expect = 9.6
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 742 TPTNASEMEYMNDIPRQSEPQHAKETIVRDNQTHRELSPKTFVRVQKENTLIVNVAKIED 801
TP+ ++ D ++ + + KE R+ + RE+ K + + + ++ED
Sbjct: 1049 TPSTSTHQAMFKDKEKERKKKE-KEKEEREREARREMKRKETKEERNKRKEMERAKRLED 1107
Query: 802 RISNLEAKRPERKTSRDKMNERQMKVKQVIE 832
E KR E+K RD+ + + KV++ E
Sbjct: 1108 --ERQERKR-EKKKERDERKKEKEKVRKKAE 1135
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 29.9 bits (64), Expect = 9.6
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 742 TPTNASEMEYMNDIPRQSEPQHAKETIVRDNQTHRELSPKTFVRVQKENTLIVNVAKIED 801
TP+ ++ D ++ + + KE R+ + RE+ K + + + ++ED
Sbjct: 1064 TPSTSTHQAMFKDKEKERKKKE-KEKEEREREARREMKRKETKEERNKRKEMERAKRLED 1122
Query: 802 RISNLEAKRPERKTSRDKMNERQMKVKQVIE 832
E KR E+K RD+ + + KV++ E
Sbjct: 1123 --ERQERKR-EKKKERDERKKEKEKVRKKAE 1150
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 29.9 bits (64), Expect = 9.6
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 742 TPTNASEMEYMNDIPRQSEPQHAKETIVRDNQTHRELSPKTFVRVQKENTLIVNVAKIED 801
TP+ ++ D ++ + + KE R+ + RE+ K + + + ++ED
Sbjct: 1064 TPSTSTHQAMFKDKEKERKKKE-KEKEEREREARREMKRKETKEERNKRKEMERAKRLED 1122
Query: 802 RISNLEAKRPERKTSRDKMNERQMKVKQVIE 832
E KR E+K RD+ + + KV++ E
Sbjct: 1123 --ERQERKR-EKKKERDERKKEKEKVRKKAE 1150
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 29.9 bits (64), Expect = 9.6
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 742 TPTNASEMEYMNDIPRQSEPQHAKETIVRDNQTHRELSPKTFVRVQKENTLIVNVAKIED 801
TP+ ++ D ++ + + KE R+ + RE+ K + + + ++ED
Sbjct: 758 TPSTSTHQAMFKDKEKERKKKE-KEKEEREREARREMKRKETKEERNKRKEMERAKRLED 816
Query: 802 RISNLEAKRPERKTSRDKMNERQMKVKQVIE 832
E KR E+K RD+ + + KV++ E
Sbjct: 817 --ERQERKR-EKKKERDERKKEKEKVRKKAE 844
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 29.9 bits (64), Expect = 9.6
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 742 TPTNASEMEYMNDIPRQSEPQHAKETIVRDNQTHRELSPKTFVRVQKENTLIVNVAKIED 801
TP+ ++ D ++ + + KE R+ + RE+ K + + + ++ED
Sbjct: 1049 TPSTSTHQAMFKDKEKERKKKE-KEKEEREREARREMKRKETKEERNKRKEMERAKRLED 1107
Query: 802 RISNLEAKRPERKTSRDKMNERQMKVKQVIE 832
E KR E+K RD+ + + KV++ E
Sbjct: 1108 --ERQERKR-EKKKERDERKKEKEKVRKKAE 1135
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 29.9 bits (64), Expect = 9.6
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 742 TPTNASEMEYMNDIPRQSEPQHAKETIVRDNQTHRELSPKTFVRVQKENTLIVNVAKIED 801
TP+ ++ D ++ + + KE R+ + RE+ K + + + ++ED
Sbjct: 1064 TPSTSTHQAMFKDKEKERKKKE-KEKEEREREARREMKRKETKEERNKRKEMERAKRLED 1122
Query: 802 RISNLEAKRPERKTSRDKMNERQMKVKQVIE 832
E KR E+K RD+ + + KV++ E
Sbjct: 1123 --ERQERKR-EKKKERDERKKEKEKVRKKAE 1150
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 29.9 bits (64), Expect = 9.6
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 742 TPTNASEMEYMNDIPRQSEPQHAKETIVRDNQTHRELSPKTFVRVQKENTLIVNVAKIED 801
TP+ ++ D ++ + + KE R+ + RE+ K + + + ++ED
Sbjct: 1064 TPSTSTHQAMFKDKEKERKKKE-KEKEEREREARREMKRKETKEERNKRKEMERAKRLED 1122
Query: 802 RISNLEAKRPERKTSRDKMNERQMKVKQVIE 832
E KR E+K RD+ + + KV++ E
Sbjct: 1123 --ERQERKR-EKKKERDERKKEKEKVRKKAE 1150
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 29.9 bits (64), Expect = 9.6
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 363 SVLAVGDTKNTNFFISTLVTYVLTYHLGWVSTVSPYDSEVHQTAATKLNDSKRPYNVLWA 422
S +A+G TK++ L Y TYH T+ PYDSE T+ + + SK + +W
Sbjct: 6799 SQVAMG-TKSSGDIKEALEYYQNTYH-----TIIPYDSETGNTSPSYVRISKLIPSKIWQ 6852
Query: 423 QL 424
+L
Sbjct: 6853 KL 6854
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.132 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,001,630
Number of Sequences: 27539
Number of extensions: 987796
Number of successful extensions: 2620
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 2612
Number of HSP's gapped (non-prelim): 35
length of query: 1018
length of database: 12,573,161
effective HSP length: 89
effective length of query: 929
effective length of database: 10,122,190
effective search space: 9403514510
effective search space used: 9403514510
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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