Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000236-TA|BGIBMGA000236-PA|IPR006092|Acyl-CoA
dehydrogenase, N-terminal, IPR006091|Acyl-CoA dehydrogenase/oxidase,
central region, IPR006090|Acyl-CoA dehydrogenase, type 1,
IPR009100|Acyl-CoA dehydrogenase/oxidase, middle and N-terminal,
IPR009075|Acyl-CoA dehydrogenase/oxidase C-terminal,
IPR006089|Acyl-CoA dehydrogenase
(416 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0195 - 1409820-1409966,1410304-1410360,1410774-1410828,141... 506 e-143
01_01_0413 - 3107668-3107796,3107879-3107971,3108082-3108253,310... 156 4e-38
05_01_0464 - 3670397-3670525,3671152-3671244,3671366-3671537,367... 134 2e-31
06_02_0283 + 13726047-13726090,13726160-13726266,13726515-137266... 118 9e-27
07_03_1669 + 28499143-28499409,28499915-28500055,28500528-285006... 104 2e-22
06_02_0285 + 13789900-13790071,13790407-13790525,13790642-137907... 89 8e-18
06_01_0023 + 227014-227166,227893-228001,228096-228157,228284-22... 51 1e-06
11_06_0340 - 22500411-22500566,22500660-22500783,22500914-225010... 49 8e-06
06_02_0320 - 14347195-14347443,14347573-14347674,14347747-143478... 44 2e-04
03_06_0388 + 33564096-33564485,33564642-33564812,33565125-335651... 32 0.98
04_03_0829 + 20123522-20123668,20124771-20124881 30 3.9
01_07_0274 + 42428947-42429108,42429405-42430178 30 3.9
01_07_0324 - 42731581-42731696,42731791-42731926,42732006-427320... 29 6.9
08_02_1624 - 28334067-28335851 29 9.1
08_02_0696 + 20137167-20137485,20137601-20137740,20137841-20137951 29 9.1
07_02_0030 + 12002825-12003510,12003654-12003708,12003911-120039... 29 9.1
01_07_0275 + 42434082-42435152 29 9.1
>05_01_0195 -
1409820-1409966,1410304-1410360,1410774-1410828,
1410902-1411002,1411051-1411205,1411395-1411459,
1411545-1411595,1411817-1411893,1412153-1412262,
1412355-1412403,1412528-1412572,1412689-1412813,
1413087-1413228,1413336-1413446
Length = 429
Score = 506 bits (1248), Expect = e-143
Identities = 250/398 (62%), Positives = 301/398 (75%), Gaps = 22/398 (5%)
Query: 37 EEQQQLRKMVFDFAQKELAPKAAEIDKENNFKELRPFWKKLGDLGLLGITASSDYGGTGG 96
+ Q+Q ++ V FAQ+ +AP AA ID N+F + WK +GD L G+TA +YGG G
Sbjct: 33 DTQEQFKESVHKFAQETIAPHAAAIDASNHFPKDVNLWKLMGDFNLHGLTAPEEYGGMGL 92
Query: 97 KYSDHCVIMEELSRASGGIALSYGAHSNLCVNQINRNGTEEQKSKYLPKLCSGEHIGALA 156
Y HC+ MEE+SRASG + LSYGAHSNLC+NQ+ R+G+ QK KYLPKL SGEH+GALA
Sbjct: 93 GYMYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKLKYLPKLISGEHVGALA 152
Query: 157 MSEPGSGSDVVSMKLRAEKKGDYYVLNGNKFWITNGPDADVLVVYAKTNWSTSKQQHGIS 216
MSEP SGSDVVSMK +AEK YV+NGNK W TNGP A LVVYAKT+ + + GI+
Sbjct: 153 MSEPNSGSDVVSMKCKAEKVDGGYVINGNKMWCTNGPSAQTLVVYAKTDIAAGSK--GIT 210
Query: 217 AFLIEKDYPGFSTAQKLDKLGMRGSNTGELVFEDCKVPAANLLGQENKGVYVLMSGLDLE 276
AF+IEK PGFSTAQKLDKLGMRGS+T ELVFE+C VP N+LG+E KGVYV+MSGLDLE
Sbjct: 211 AFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPHENVLGEEGKGVYVMMSGLDLE 270
Query: 277 RLVLAAGPVGLMQAAIDTAFLYAHTRKQFGKNIGEFQ--------------------LIQ 316
RLVLAAGP+GLMQA +D A Y R+QFG+ IGEFQ L+Q
Sbjct: 271 RLVLAAGPIGLMQACLDVAVPYVRQREQFGRPIGEFQFIQVQHFVNRRLVPTITSYLLMQ 330
Query: 317 GKMADMYTTLSACRSYLYNVAKACDNGHVNSKDCAGVILYCAEKATQVALDAIQILGGNG 376
GK+ADMYT+L + RS++Y+VA+ CDNG V+ KDCAGVIL+ AE+ATQVAL AIQ LGGNG
Sbjct: 331 GKLADMYTSLQSSRSFVYSVARDCDNGKVDRKDCAGVILFAAERATQVALQAIQCLGGNG 390
Query: 377 YINDYPTGRILRDAKLYEIGAGTSEVRRMLIGRALNNE 414
YIN+YPTGR+LRDAKL+EIGAGTSE+RRM+IGR L E
Sbjct: 391 YINEYPTGRLLRDAKLFEIGAGTSEIRRMIIGRELFKE 428
>01_01_0413 -
3107668-3107796,3107879-3107971,3108082-3108253,
3108341-3108417,3108514-3108673,3108766-3108875,
3109384-3109443,3109545-3109618,3109748-3109871,
3110795-3110872,3111169-3111275,3112572-3112673,
3112800-3112815
Length = 433
Score = 156 bits (378), Expect = 4e-38
Identities = 116/389 (29%), Positives = 183/389 (47%), Gaps = 16/389 (4%)
Query: 25 HYPIDDHVFGLSEEQQQLRKMVFDFAQKELAPKAAEIDKENNFKELRPFWK--KLGDLGL 82
+Y IDD L+ E+Q +RK V +KE+AP A ++ F PF KL LG+
Sbjct: 43 YYQIDDL---LTTEEQSIRKNVRAIMEKEIAPIMATYWEKAEF----PFHAIPKLSSLGV 95
Query: 83 LGITASSDYGGTGGKYSDHCVIMEELSRASGGIALSYGAHSNLCVNQINRNGTEEQKSKY 142
G T YG G + + M E++R + HS+L + I G+E QK KY
Sbjct: 96 AGGTIKG-YGCPGLSITASAITMAEIARVDASCSTFILVHSSLAMVTIALCGSEVQKQKY 154
Query: 143 LPKLCSGEHIGALAMSEPGSGSDVVSMKLRAEKKGDYYVLNGNKFWITNGPDADVLVVYA 202
LP L +G A++EP GSD S+ A K + ++G K WI N ADVLVV A
Sbjct: 155 LPSLAQLTAVGCWALTEPNHGSDASSLITTATKVPGGWHIDGQKRWIGNSTFADVLVVLA 214
Query: 203 KTNWSTSKQQHGISAFLIEKDYPGFSTAQKLDKLGMRGSNTGELVFEDCKVPAANLLGQE 262
+ + +KQ +G F++ K PG + +K+G+R G++VF VP + L
Sbjct: 215 RN--ANTKQLNG---FIVRKGAPGLKATKIENKIGLRMVQNGDIVFNKVFVPEEDRLPGV 269
Query: 263 NKGVYVLMSGLDLERLVLAAGPVGLMQAAIDTAFLYAHTRKQFGKNIGEFQLIQGKMADM 322
N + L + R+++A P+G+ D Y RKQFG + FQL Q K+ M
Sbjct: 270 N-SFQDISKVLAISRVMVAWQPIGISMGVFDVCHRYLKERKQFGVPLVAFQLNQEKLVRM 328
Query: 323 YTTLSACRSYLYNVAKACDNGHVNSKDCAGVILYCAEKATQVALDAIQILGGNGYINDYP 382
+ A + + K ++G + + + + A +V ++LGGNG + D+
Sbjct: 329 LGNIQAMLLVGWRLCKLYESGKMTPGHASLGKGWTSRMAREVVSLGRELLGGNGILADFL 388
Query: 383 TGRILRDAKLYEIGAGTSEVRRMLIGRAL 411
+ D + GT ++ ++ GR +
Sbjct: 389 VAKAFCDLEPIYSYEGTYDINSLVTGREI 417
>05_01_0464 -
3670397-3670525,3671152-3671244,3671366-3671537,
3671626-3671702,3671819-3671978,3672104-3672213,
3672321-3672380,3672492-3672629,3672922-3672999,
3673227-3673333,3674506-3674598,3674708-3674723
Length = 410
Score = 134 bits (323), Expect = 2e-31
Identities = 111/400 (27%), Positives = 182/400 (45%), Gaps = 36/400 (9%)
Query: 14 TANKTGHRCISHYPIDDHVFGLSEEQQQLRKMVFDFAQKELAPKAAEIDKENNFKELRPF 73
TA++ +Y DD L++E++ LRK V ++E+AP E ++ F PF
Sbjct: 29 TASQFPPAVSDYYQFDDL---LTDEEKTLRKKVRGIMEREIAPIMTEYWEKAEF----PF 81
Query: 74 WK--KLGDLGLLGITASSDYGGTGGKYSDHCVIMEELSRASGGIALSYGAHSNLCVNQIN 131
KL LGL G T +D + +S ++ + LC
Sbjct: 82 HAIPKLATLGLAGGTTKTD--------------QDNYFLSSLFLSFQFSVQIALC----- 122
Query: 132 RNGTEEQKSKYLPKLCSGEHIGALAMSEPGSGSDVVSMKLRAEKKGDYYVLNGNKFWITN 191
G+E QK KYLP L IG A++EP GSD S++ A K + L+G K WI N
Sbjct: 123 --GSEAQKQKYLPSLTQFRTIGCWALTEPDYGSDASSLRTAATKVPGGWHLDGQKRWIGN 180
Query: 192 GPDADVLVVYAKTNWSTSKQQHGISAFLIEKDYPGFSTAQKLDKLGMRGSNTGELVFEDC 251
G ADVL++ A+ S + Q +G F+++K PG + +K+G+R ++V
Sbjct: 181 GTFADVLIILARN--SDTNQLNG---FIVKKGAPGLKCTKIENKIGLRMVQNADIVLNKV 235
Query: 252 KVPAANLLGQENKGVYVLMSGLDLERLVLAAGPVGLMQAAIDTAFLYAHTRKQFGKNIGE 311
VP + L N + L + R+++A P+G+ D Y RKQFG +
Sbjct: 236 FVPDEDRLTGIN-SFQDINKVLAMSRIMVAWQPIGISMGVFDMCHRYLKERKQFGVPLAA 294
Query: 312 FQLIQGKMADMYTTLSACRSYLYNVAKACDNGHVNSKDCAGVILYCAEKATQVALDAIQI 371
FQL Q K+ M + A + + K ++G + + + ++KA +V ++
Sbjct: 295 FQLNQEKLVRMLGNIQAMLLVGWRLCKLYESGKMTPGHASLGKAWTSKKAREVVSLGREL 354
Query: 372 LGGNGYINDYPTGRILRDAKLYEIGAGTSEVRRMLIGRAL 411
LGGNG + D+ + D + GT ++ ++ GR +
Sbjct: 355 LGGNGILADFLVAKAFCDLEPIFSYEGTYDINSLVTGREI 394
>06_02_0283 +
13726047-13726090,13726160-13726266,13726515-13726621,
13726735-13726812,13734948-13735071,13735585-13735658,
13735742-13735801,13737561-13737670,13737806-13737965,
13738218-13738360,13738461-13738605,13738727-13738819,
13740070-13740186
Length = 453
Score = 118 bits (284), Expect = 9e-27
Identities = 111/399 (27%), Positives = 180/399 (45%), Gaps = 44/399 (11%)
Query: 35 LSEEQQQLRKMVFDFAQKELAPKAAEIDKENNFK-ELRPFWKKLGDLGLLGITASSDYG- 92
L+EE++ L+ V F + E+AP ++ ++ F L P K+ LG+ G T YG
Sbjct: 61 LTEEEKDLQIKVRQFMENEVAPIISKFWEKAEFPFHLIP---KMSTLGIAGGTIKG-YGC 116
Query: 93 -GTGGKYSDHCVIMEELSRASGGIALSYGAHSNLCVNQINRNGTEEQKSKYLPKLCSGEH 151
G G C + E++R IA S L + I + G+E QK KYL L +
Sbjct: 117 PGLSGPACAMCFL--EIARVDASIASFCLVQSCLAMVSIAQLGSEAQKEKYLRPLSKMQK 174
Query: 152 IGALAMSEPGSGSDVVSMKLRAEKKGDYYVLNGNKFWITNGPDADVLVVYAKTNWSTSKQ 211
+ A+SEP GSD S+ A K ++LNG K W N AD+ VV A N ST++
Sbjct: 175 VCVYALSEPNHGSDASSLNTTARKVPGGWILNGQKRWPANSSFADIFVVLA-CNTSTNQ- 232
Query: 212 QHGISAFLIEKDYPGFSTAQKLDKLGMRGSNTGELVFEDC------KVPAAN-------- 257
I+ F++ PG ++ +K+ +R +++ ED ++P AN
Sbjct: 233 ---INGFIVNGGAPGLKISKIDNKMSLRVVQNCDILLEDVFVPDDDRLPGANSFQDLVKI 289
Query: 258 ------LLGQENKGVYV-LMSGLDLERLVLAAGPVGLMQAAIDTAFLYAHTRKQFGKNIG 310
+G + YV + L R+++A +G+ D Y RKQFG +
Sbjct: 290 YSISPHTIGDTDLTDYVAYIQALSFSRVIVAWISIGIAAGVYDACLRYLGERKQFGAPLA 349
Query: 311 EFQLIQGKMADMYTTLSACRSYLYNVAKACDNGHVNSKDCAGVILYCAEKATQVALDAIQ 370
FQL Q K+ M+ L R Y + D+G + + + + +KA + +
Sbjct: 350 AFQLNQEKL--MW--LLGWRLY-----ELHDSGRMTTGQASLGKAWITKKARETVALGRE 400
Query: 371 ILGGNGYINDYPTGRILRDAKLYEIGAGTSEVRRMLIGR 409
+LGGNG + D+ G+ D + G+ EV +++ R
Sbjct: 401 LLGGNGIVTDFHVGKAFCDMESLYTYEGSYEVNALIVAR 439
>07_03_1669 +
28499143-28499409,28499915-28500055,28500528-28500659,
28501185-28501373,28501503-28501580,28502267-28502386,
28502701-28502818,28503012-28503280,28503428-28503622,
28503737-28503879,28504096-28504180,28504270-28504479,
28504559-28504711,28504862-28504966,28505044-28505235
Length = 798
Score = 104 bits (249), Expect = 2e-22
Identities = 79/280 (28%), Positives = 126/280 (45%), Gaps = 12/280 (4%)
Query: 132 RNGTEEQKSKYLPKLCSGEHIGALAMSEPG-SGSDVVSMKLRAEKKGDYYVLNGNKFWIT 190
R GT+EQ+ ++L L G+ AM+EP + SD +++ ++GD+YV+NG K+W +
Sbjct: 507 RYGTKEQQKQWLVPLLEGKIRSGFAMTEPQVASSDATNIECSISRQGDFYVINGTKWWTS 566
Query: 191 NG--PDADVLVVYAKTNWSTSKQQHGISAFLIEKDYPGFSTAQKLDKLGMRGSNTG--EL 246
P +LV+ KT++S K + S L++ PG + L G + G E+
Sbjct: 567 GAMDPRCQILVLMGKTDFSAPKHKQQ-SMILVDVKTPGVQIRRPLLVFGFDDAPHGHAEI 625
Query: 247 VFEDCKVPAANLLGQENKGVYVLMSGLDLERLVLAAGPVGLMQAAIDTAFLYAHTRKQFG 306
FE+ +VPA N+L E +G + L RL +G + ++ A +R FG
Sbjct: 626 TFENVRVPATNILLGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMNLMVERALSRTTFG 685
Query: 307 KNIGEFQLIQGKMADMYTTLSACRSYLYNVAKACDNGHVNSKDCAGVILYCAEKATQVAL 366
K I + +A L R + A D H N K G++ A +AL
Sbjct: 686 KKIAQHGSFLADLAKCRVELEQARLLVLEAADQLDR-HGNKK-ARGILAMAKVAAPNMAL 743
Query: 367 D----AIQILGGNGYINDYPTGRILRDAKLYEIGAGTSEV 402
A+Q+ GG G +D + A+ I G EV
Sbjct: 744 KVLDMAMQVHGGAGLSSDTVLSHLWATARTLRIADGPDEV 783
>06_02_0285 +
13789900-13790071,13790407-13790525,13790642-13790751,
13790887-13791046,13791407-13791483,13792299-13792470,
13792580-13792672,13793617-13793733
Length = 339
Score = 88.6 bits (210), Expect = 8e-18
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 6/232 (2%)
Query: 180 YVLNGNKFWITNGPDADVLVVYAKTNWSTSKQQHGISAFLIEKDYPGFSTAQKLDKLGMR 239
++LNG K W NG ADV VV A +TS Q I+ F++ PG ++ +K +R
Sbjct: 102 WILNGQKRWPANGSFADVFVVLA---CNTSNNQ--INGFIVNGGSPGLKISKIENKTSLR 156
Query: 240 GSNTGELVFEDCKVPAANLLGQENKGVYVLMSGLDLERLVLAAGPVGLMQAAIDTAFLYA 299
+++ ED VP + L N L+ L +++A +G+ D Y
Sbjct: 157 VVQNCDILLEDVFVPDDDRLPGANS-FQDLVKALSFSCVIVAWISIGIAAGVYDACLRYL 215
Query: 300 HTRKQFGKNIGEFQLIQGKMADMYTTLSACRSYLYNVAKACDNGHVNSKDCAGVILYCAE 359
RKQFG + FQL Q K+ M + A + + K D+G + + + + +
Sbjct: 216 GERKQFGAPLAAFQLNQEKLVRMLGNIQAMWLLGWRLCKLHDSGRMTTGQASLGKAWITK 275
Query: 360 KATQVALDAIQILGGNGYINDYPTGRILRDAKLYEIGAGTSEVRRMLIGRAL 411
+A + ++LGGNG + D+ G+ D + G+ EV ++ R +
Sbjct: 276 QARETVALGRELLGGNGIVTDFHVGKAFCDMESIYTYEGSYEVNVLVAAREI 327
>06_01_0023 +
227014-227166,227893-228001,228096-228157,228284-228493,
228609-228696,228774-228936,229037-229235,229456-229653,
229887-230018,230182-230302,230453-230563,230710-230779,
230880-231063,231137-231346
Length = 669
Score = 51.2 bits (117), Expect = 1e-06
Identities = 63/219 (28%), Positives = 94/219 (42%), Gaps = 32/219 (14%)
Query: 122 HSNLCVNQINRNGTEEQKSKYLPKLCSGEHIGALAMSEPGSGSDVVSMKLRA--EKKGDY 179
H + V I GTEEQ+ K+LP + IG A +E G GS+V ++ A + K D
Sbjct: 107 HWGMFVPAIKGQGTEEQQKKWLPLAYRFQIIGCYAQTELGHGSNVQGLETTATFDPKTDE 166
Query: 180 YV-----LNGNKFWITN-GPDADVLVVYAKTNWSTSKQQHGISAFLIE----KDY---PG 226
+V L +K+W G + VVYA+ T + +GI F+++ +D+ PG
Sbjct: 167 FVIHSPTLTSSKWWPGGLGKASTHAVVYARL--ITEGKDYGIHGFIVQLRSLEDHSPLPG 224
Query: 227 FSTAQKLDKLGMRGSNT---GELVFEDCKVPAANL---LGQENK-GVYV--------LMS 271
+ K G N+ G L F+ ++P + L Q K G YV L
Sbjct: 225 VTLGDIGGKFGSGAYNSMDNGVLRFDHVRIPRDQMLMRLSQVTKEGKYVHSDVPKQLLYG 284
Query: 272 GLDLERLVLAAGPVGLMQAAIDTAFLYAHTRKQFGKNIG 310
+ R + A + A A Y+ RKQFG G
Sbjct: 285 TMVFVRQTIVADASKALSRATCIAVRYSAIRKQFGPQTG 323
>11_06_0340 -
22500411-22500566,22500660-22500783,22500914-22501080,
22501157-22501336,22501544-22502427,22502728-22502843,
22503745-22504217
Length = 699
Score = 48.8 bits (111), Expect = 8e-06
Identities = 83/369 (22%), Positives = 150/369 (40%), Gaps = 51/369 (13%)
Query: 99 SDHCVIMEELSRASGGIALSYGAHSNLCVNQINRNGTEEQKSKYLPKLCSGEHIGALAMS 158
+++ +ME A + + G +L I GT++ + ++ + + ++ G AM+
Sbjct: 133 AEYFAVMEAAGGADISLGVKLGVQYSLWGGSIINLGTKKHRDRFFDGIDNLDYPGCFAMT 192
Query: 159 EPGSGSDVVSMKLRA--EKKGDYYVLN-----GNKFWITN----GPDADVL--VVYAKTN 205
E GS+V +++ A + D +++N K+WI N G A V ++
Sbjct: 193 ELHHGSNVQALQTTATFDPVTDEFIINTPNDGAIKWWIGNAALHGKFATVFARLILPLQG 252
Query: 206 WSTSKQQHGISAFLIE-KD------YPGFSTAQKLDKLGMRGSNTGELVFEDCKVPAANL 258
GI AF++ +D PG K+G+ G + G L F ++P NL
Sbjct: 253 KGGDPADMGIHAFIVPIRDLDTNAVLPGIEINDCGHKIGLNGVDNGALRFRSVRIPRDNL 312
Query: 259 LGQ----------------ENKGVYVLMSGLDLERLVLAAGPVGLMQAAIDTAFLYAHTR 302
L + NK + L R+ +A VG+++ ++ A YA R
Sbjct: 313 LNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGIAYSSVGILKVSVTIAVRYALLR 372
Query: 303 KQFGK------NIGEFQLIQGKMADMYTTLSACR-SYLYNVAKACDNGHVNSKD-CAGV- 353
+QFG ++ ++Q Q K+ M + A + Y V K + N +D A V
Sbjct: 373 QQFGPPKKPEISVLDYQSHQHKLMPMLASSYAFHFATRYLVDKYSEMKKTNDEDVMADVH 432
Query: 354 ILYCAEKA--TQVALDAIQI----LGGNGYINDYPTGRILRDAKLYEIGAGTSEVRRMLI 407
+L KA T +I + GG+GY G + D +++ G + V +
Sbjct: 433 VLSSGLKAYITSYTAKSISVCRESCGGHGYAAVNRFGALRNDHDIFQTFEGDNTVLLQQV 492
Query: 408 GRALNNEYK 416
L +Y+
Sbjct: 493 AGDLLKQYQ 501
>06_02_0320 -
14347195-14347443,14347573-14347674,14347747-14347851,
14347938-14348084,14348171-14348290,14348743-14348878,
14349198-14349328,14350854-14350928,14351040-14351139,
14351213-14351385,14351474-14351581,14351674-14351791,
14353477-14353970
Length = 685
Score = 44.0 bits (99), Expect = 2e-04
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 16/159 (10%)
Query: 115 IALSYGAHSNLCVNQINRNGTEEQKSKYLPKLCSGEHIGALAMSEPGSGSDVVSMKLRA- 173
+A+ G H L + I GT+ K+L + G +M+E G GS+V ++ A
Sbjct: 154 LAIKIGVHFFLWGSAIKFLGTKRHHDKWLSDTENYVIKGCFSMTELGHGSNVRGIETVAT 213
Query: 174 -EKKGDYYVLN-----GNKFWITNGPD-ADVLVVYAKTNWSTSKQQHGISAFLI------ 220
+ K +V+N K+WI + A +V+A+ + + + G+ AF+
Sbjct: 214 YDIKTREFVINTPCESAQKYWIGGAANHATHTIVFAQLH--INGRNEGVHAFVAQIRDEH 271
Query: 221 EKDYPGFSTAQKLDKLGMRGSNTGELVFEDCKVPAANLL 259
E P A K+G+ G + G + F + +VP NLL
Sbjct: 272 ENVMPNIQIADCGHKIGLNGVDNGRIWFNNIRVPRENLL 310
>03_06_0388 +
33564096-33564485,33564642-33564812,33565125-33565145,
33565260-33565467,33566156-33566346,33566465-33566584,
33566703-33566936
Length = 444
Score = 31.9 bits (69), Expect = 0.98
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 3/118 (2%)
Query: 59 AEIDKENNFKELRPFWKKLGDLGLLGITASSDYGGTG-GKYSDHCVIMEELSRASGGIAL 117
A D N + R +W + + L + G G G + + C I L AL
Sbjct: 137 ASPDMSNWNESNRRYWIVVRGVDGLAVGGGGTIDGNGEGWWENSCKINRALPCKGAPTAL 196
Query: 118 SYGAHSNLCVNQINRNGTEEQKSKYLPKLCSGEHIGALAMSEPGSGSDVVSMKLRAEK 175
S+ NL VN + Q+ + C+G + L++S PG+ + + + K
Sbjct: 197 SFHTCDNLSVNGLKM--VNSQQIHMSVEDCTGVELAHLSISAPGTSPNTDGIHITHSK 252
>04_03_0829 + 20123522-20123668,20124771-20124881
Length = 85
Score = 29.9 bits (64), Expect = 3.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 117 LSYGAHSNLCVNQINRNGTEEQKSKYLPKL 146
L+ G NLC+ +R+G E +K+K P++
Sbjct: 26 LAIGQGENLCIQMQHRDGNENEKNKISPRV 55
>01_07_0274 + 42428947-42429108,42429405-42430178
Length = 311
Score = 29.9 bits (64), Expect = 3.9
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 350 CAGVILYCAEKATQVALDAIQILGGNGYINDYPTGR 385
C+G ++ CA+ T A D+++++GG Y P GR
Sbjct: 99 CSGAVVSCADILTLAARDSVRLVGGPEY--RVPLGR 132
>01_07_0324 -
42731581-42731696,42731791-42731926,42732006-42732098,
42732189-42732290,42732383-42732516,42732593-42732707,
42733534-42733560,42733692-42733799,42733890-42733982,
42734066-42734365
Length = 407
Score = 29.1 bits (62), Expect = 6.9
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 292 IDTAFLYAHTRKQFGK-NIGEFQLIQG--KMADMYTTLSA-CRSYLYNVAKACDNGHVNS 347
+D A + H R F + NI ++G KMAD+ L+A C YN + D + N
Sbjct: 67 VDPAPPHLHGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNT-RPLDTIYSNF 125
Query: 348 KDCAGVILYCAE 359
D V+ YC+E
Sbjct: 126 IDALPVVKYCSE 137
>08_02_1624 - 28334067-28335851
Length = 594
Score = 28.7 bits (61), Expect = 9.1
Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 91 YGGTGGKYSDHCVIMEELSRASGGIALSYGAHSNLCVNQINRNGTEEQKSKYLPKLCSGE 150
Y G+GG+ + + + G +AL Y H + V I + + S + + G
Sbjct: 219 YSGSGGRLRNRLDHSADQTLQRGNLALHYSCHYGIEVRVIRGHACDHSPSSKV-YVYDGL 277
Query: 151 HIGALAMSEPG-SGSDVVSMKL-RAEKKGDYYVLNGNKFWITNGPDADVL 198
+ + PG SG DV KL R + D G+K W T D L
Sbjct: 278 YRVVTSTFGPGKSGRDVCKFKLVRIPGQDDL----GSKAWHTAAELKDAL 323
>08_02_0696 + 20137167-20137485,20137601-20137740,20137841-20137951
Length = 189
Score = 28.7 bits (61), Expect = 9.1
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 80 LGLLGITASSDYGGTGGKYSDHCVIMEELSRASGGIA 116
L LL ++ASS GG GGK ++H + + SGG A
Sbjct: 44 LVLLRVSASSSGGGGGGK-AEHSAVGAAVGDESGGAA 79
>07_02_0030 +
12002825-12003510,12003654-12003708,12003911-12003996,
12004093-12004433,12004512-12004699,12004776-12004962,
12005035-12005139,12005202-12005239,12005369-12005653
Length = 656
Score = 28.7 bits (61), Expect = 9.1
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 68 KELRPFWKKLGDLGLLGITASSDYGGTGGKY-SDHCVIMEELSRASGGIALSYGAHSNLC 126
K R FWK+L G + +S + G T G + SD + + +S A S A + +
Sbjct: 273 KSSRSFWKRLRPTG-METGSSKETGPTAGNHPSDEQPATDNIDPSSEPPAGSQSAEAGVG 331
Query: 127 VNQ--INRNGTEEQKSKYLPKL 146
+Q RN ++ +++K +P++
Sbjct: 332 ASQELPTRNQSDTEQNKDIPEV 353
>01_07_0275 + 42434082-42435152
Length = 356
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 348 KDCAGVILYCAEKATQVALDAIQILGGNGYINDYPTGR 385
++C ++ C++ T A D++ + GG Y D P GR
Sbjct: 124 RECGDTVVSCSDIVTLAARDSVLLAGGPWY--DVPLGR 159
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.135 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,409,636
Number of Sequences: 37544
Number of extensions: 551785
Number of successful extensions: 1102
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1071
Number of HSP's gapped (non-prelim): 21
length of query: 416
length of database: 14,793,348
effective HSP length: 84
effective length of query: 332
effective length of database: 11,639,652
effective search space: 3864364464
effective search space used: 3864364464
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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