Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000236-TA|BGIBMGA000236-PA|IPR006092|Acyl-CoA
dehydrogenase, N-terminal, IPR006091|Acyl-CoA dehydrogenase/oxidase,
central region, IPR006090|Acyl-CoA dehydrogenase, type 1,
IPR009100|Acyl-CoA dehydrogenase/oxidase, middle and N-terminal,
IPR009075|Acyl-CoA dehydrogenase/oxidase C-terminal,
IPR006089|Acyl-CoA dehydrogenase
(416 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g45300.1 68416.m04891 isovaleryl-CoA-dehydrogenase (IVD) iden... 512 e-145
At3g51840.1 68416.m05685 short-chain acyl-CoA oxidase identical ... 155 7e-38
At3g06810.1 68416.m00808 acyl-CoA dehydrogenase-related low simi... 101 1e-21
At5g65110.1 68418.m08191 acyl-CoA oxidase (ACX2) identical to ac... 54 2e-07
At4g16760.1 68417.m02531 acyl-CoA oxidase (ACX1) identical to ac... 49 5e-06
At2g35690.1 68415.m04377 acyl-CoA oxidase, putative strong simil... 48 2e-05
At1g06290.1 68414.m00665 acyl-CoA oxidase (ACX3) identical to ac... 48 2e-05
At1g06310.1 68414.m00667 acyl-CoA oxidase, putative strong simil... 41 0.001
At4g26450.1 68417.m03805 expressed protein 30 3.3
At2g19230.1 68415.m02245 leucine-rich repeat protein kinase, put... 29 7.6
>At3g45300.1 68416.m04891 isovaleryl-CoA-dehydrogenase (IVD)
identical to isovaleryl-CoA-dehydrogenase precursor
[Arabidopsis thaliana] GI:5596622
Length = 409
Score = 512 bits (1264), Expect = e-145
Identities = 247/378 (65%), Positives = 291/378 (76%), Gaps = 2/378 (0%)
Query: 37 EEQQQLRKMVFDFAQKELAPKAAEIDKENNFKELRPFWKKLGDLGLLGITASSDYGGTGG 96
+ Q Q ++ V FAQ +AP A IDK N+F + WK +G+ L GITA +YGG G
Sbjct: 33 DTQLQFKESVSKFAQDNIAPHAERIDKTNSFPKDVNLWKLMGEFNLHGITAPEEYGGLGL 92
Query: 97 KYSDHCVIMEELSRASGGIALSYGAHSNLCVNQINRNGTEEQKSKYLPKLCSGEHIGALA 156
Y HC+ MEE+SRASG +ALSYGAHSNLC+NQ+ RNGT QK KYLPKL SGEH+GALA
Sbjct: 93 GYLYHCIAMEEISRASGSVALSYGAHSNLCINQLVRNGTAAQKEKYLPKLISGEHVGALA 152
Query: 157 MSEPGSGSDVVSMKLRAEKKGDYYVLNGNKFWITNGPDADVLVVYAKTNWSTSKQQHGIS 216
MSEP +GSDVV MK +AEK Y+LNGNK W TNGP A+ LVVYAKT+ T GI+
Sbjct: 153 MSEPNAGSDVVGMKCKAEKVDGGYILNGNKMWCTNGPSAETLVVYAKTD--TKAGSKGIT 210
Query: 217 AFLIEKDYPGFSTAQKLDKLGMRGSNTGELVFEDCKVPAANLLGQENKGVYVLMSGLDLE 276
AF+IEK GFSTAQKLDKLGMRGS+T ELVFE+C VP N+L +E KGVYVLMSGLDLE
Sbjct: 211 AFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENCFVPEENILDKEGKGVYVLMSGLDLE 270
Query: 277 RLVLAAGPVGLMQAAIDTAFLYAHTRKQFGKNIGEFQLIQGKMADMYTTLSACRSYLYNV 336
RLVLAAGP+G+MQA +D Y R+QFG+ +GEFQ IQGK+ADMYT L + RSY+Y+V
Sbjct: 271 RLVLAAGPLGIMQACLDNVLPYIRQREQFGRPVGEFQFIQGKVADMYTALQSSRSYVYSV 330
Query: 337 AKACDNGHVNSKDCAGVILYCAEKATQVALDAIQILGGNGYINDYPTGRILRDAKLYEIG 396
A+ CDNG V+ KDCAG IL AE+ATQVAL AIQ LGGNGYIN+Y TGR+LRDAKLYEIG
Sbjct: 331 ARDCDNGKVDPKDCAGTILCAAERATQVALQAIQCLGGNGYINEYATGRLLRDAKLYEIG 390
Query: 397 AGTSEVRRMLIGRALNNE 414
AGTSE+RR++IGR L E
Sbjct: 391 AGTSEIRRIVIGRELFKE 408
>At3g51840.1 68416.m05685 short-chain acyl-CoA oxidase identical to
Short-chain acyl CoA oxidase [Arabidopsis thaliana]
GI:5478795; contains InterPro entry IPR006089: Acyl-CoA
dehydrogenase
Length = 436
Score = 155 bits (375), Expect = 7e-38
Identities = 105/376 (27%), Positives = 182/376 (48%), Gaps = 11/376 (2%)
Query: 35 LSEEQQQLRKMVFDFAQKELAPKAAEIDKENNFK-ELRPFWKKLGDLGLLGITASSDYGG 93
L+ E+Q +RK V + +KE+AP E ++ F + P KLG +G+ G + YG
Sbjct: 55 LTPEEQAIRKKVRECMEKEVAPIMTEYWEKAEFPFHITP---KLGAMGVAGGSIKG-YGC 110
Query: 94 TGGKYSDHCVIMEELSRASGGIALSYGAHSNLCVNQINRNGTEEQKSKYLPKLCSGEHIG 153
G + + + E++R + HS+L + I G+E QK KYLP L +
Sbjct: 111 PGLSITANAIATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVA 170
Query: 154 ALAMSEPGSGSDVVSMKLRAEKKGDYYVLNGNKFWITNGPDADVLVVYAKTNWSTSKQQH 213
A++EP +GSD + A K + +NG K WI N AD+L+++A+ N +T++
Sbjct: 171 CWALTEPDNGSDASGLGTTATKVEGGWKINGQKRWIGNSTFADLLIIFAR-NTTTNQ--- 226
Query: 214 GISAFLIEKDYPGFSTAQKLDKLGMRGSNTGELVFEDCKVPAANLLGQENKGVYVLMSGL 273
I+ F+++KD PG + +K+G+R G+++ ++ VP + L N L
Sbjct: 227 -INGFIVKKDAPGLKATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGVN-SFQDTSKVL 284
Query: 274 DLERLVLAAGPVGLMQAAIDTAFLYAHTRKQFGKNIGEFQLIQGKMADMYTTLSACRSYL 333
+ R+++A P+G+ D Y RKQFG + FQL Q K+ M + A
Sbjct: 285 AVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMG 344
Query: 334 YNVAKACDNGHVNSKDCAGVILYCAEKATQVALDAIQILGGNGYINDYPTGRILRDAKLY 393
+ + K + G + + + + KA + A ++LGGNG + D+ + D +
Sbjct: 345 WRLCKLYETGQMTPGQASLGKAWISSKARETASLGRELLGGNGILADFLVAKAFCDLEPI 404
Query: 394 EIGAGTSEVRRMLIGR 409
GT ++ ++ GR
Sbjct: 405 YTYEGTYDINTLVTGR 420
>At3g06810.1 68416.m00808 acyl-CoA dehydrogenase-related low
similarity to acyl-CoA dehydrogenase [Acinetobacter sp.
NCIMB9871] GI:14587418; contains Pfam profiles PF01636:
Phosphotransferase enzyme family, PF00441: Acyl-CoA
dehydrogenase C-terminal domain, PF02770: Acyl-CoA
dehydrogenase middle domain
Length = 824
Score = 101 bits (241), Expect = 1e-21
Identities = 81/289 (28%), Positives = 127/289 (43%), Gaps = 12/289 (4%)
Query: 130 INRNGTEEQKSKYLPKLCSGEHIGALAMSEPG-SGSDVVSMKLRAEKKGDYYVLNGNKFW 188
I R G +EQ S++L L G AM+EP + SD +++ ++GD YV+NG K+W
Sbjct: 530 ILRYGNKEQISEWLIPLLEGRIRSGFAMTEPQVASSDATNIECSIRRQGDSYVINGTKWW 589
Query: 189 ITNG--PDADVLVVYAKTNWSTSKQQHGISAFLIEKDYPGFSTAQKLDKLGMRGSNTG-- 244
+ P VL++ KT+++ K + S L++ PG S + L G + G
Sbjct: 590 TSGAMDPRCRVLILMGKTDFNAPKHKQQ-SMILVDMRTPGISVKRPLTVFGFDDAPHGHA 648
Query: 245 ELVFEDCKVPAANLLGQENKGVYVLMSGLDLERLVLAAGPVGLMQAAIDTAFLYAHTRKQ 304
E+ FE+ VPA N+L E +G + L RL +G + ++ A +RK
Sbjct: 649 EISFENVVVPAKNILLGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMELMAQRALSRKT 708
Query: 305 FGKNIGEFQLIQGKMADMYTTLSACRSYLYNVAKACDNGHVNSKDCAGVILYCAEKATQV 364
FGK I + +A + L R + A D +K G++ A +
Sbjct: 709 FGKFIAQHGSFVSDLAKLRVELEGTRLLVLEAADHLDK--FGNKKARGILAMAKVAAPNM 766
Query: 365 AL----DAIQILGGNGYINDYPTGRILRDAKLYEIGAGTSEVRRMLIGR 409
AL AIQ+ G G +D + A+ I G EV IG+
Sbjct: 767 ALKVLDTAIQVHGAAGVSSDTVLAHLWATARTLRIADGPDEVHLGTIGK 815
>At5g65110.1 68418.m08191 acyl-CoA oxidase (ACX2) identical to
acyl-CoA oxidase [Arabidopsis thaliana] GI:3044212
Length = 692
Score = 53.6 bits (123), Expect = 2e-07
Identities = 81/363 (22%), Positives = 141/363 (38%), Gaps = 50/363 (13%)
Query: 104 IMEELSRASGGIALSYGAHSNLCVNQINRNGTEEQKSKYLPKLCSGEHIGALAMSEPGSG 163
IME + + + G +L + GT++ + KY + + ++ G AM+E G
Sbjct: 132 IMEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYFDGIDNLDYTGCFAMTELHHG 191
Query: 164 SDVVSMKLRA--EKKGDYYVLN-----GNKFWITNGP-DADVLVVYAK----TNWSTSKQ 211
S+V ++ A + D +V++ K+WI N V+A+ T+ S
Sbjct: 192 SNVQGLQTTATFDPLKDEFVIDTPNDGAIKWWIGNAAVHGKFATVFARLILPTHDSKGVS 251
Query: 212 QHGISAFLI-------EKDYPGFSTAQKLDKLGMRGSNTGELVFEDCKVPAANLLGQ--- 261
G+ AF++ + PG K+G+ G + G L F ++P NLL +
Sbjct: 252 DMGVHAFIVPIRDMKTHQTLPGVEIQDCGHKVGLNGVDNGALRFRSVRIPRDNLLNRFGD 311
Query: 262 -ENKGVYV-------LMSGLDLERLV-----LAAGPVGLMQAAIDTAFLYAHTRKQFGK- 307
G Y G L LV LA VG+++ + A Y+ R+QFG
Sbjct: 312 VSRDGTYTSSLPTINKRFGATLGELVGGRVGLAYASVGVLKISATIAIRYSLLRQQFGPP 371
Query: 308 -----NIGEFQLIQGKMADMYTTLSACR-SYLYNVAKACDNGHVNSKD--------CAGV 353
+I ++Q Q K+ M + A + +Y V K + + + AG+
Sbjct: 372 KQPEVSILDYQSQQHKLMPMLASTYAYHFATVYLVEKYSEMKKTHDEQLVADVHALSAGL 431
Query: 354 ILYCAEKATQVALDAIQILGGNGYINDYPTGRILRDAKLYEIGAGTSEVRRMLIGRALNN 413
Y + + GG+GY G + D +++ G + V + L
Sbjct: 432 KSYVTSYTAKALSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLK 491
Query: 414 EYK 416
YK
Sbjct: 492 RYK 494
>At4g16760.1 68417.m02531 acyl-CoA oxidase (ACX1) identical to
acyl-CoA oxidase [Arabidopsis thaliana] GI:3044214
Length = 675
Score = 49.2 bits (112), Expect = 5e-06
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 34/229 (14%)
Query: 122 HSNLCVNQINRNGTEEQKSKYLPKLCSGEHIGALAMSEPGSGSDVVSMKLRA--EKKGDY 179
H + V I GTEEQ+ K+L + IG A +E G GS+V ++ A + K D
Sbjct: 102 HWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDE 161
Query: 180 YVLN-----GNKFWITN-GPDADVLVVYAKTNWSTSKQQHGISAFLIE----KDY---PG 226
+V++ +K+W G + VVYA+ T+ + +GI F+++ +D+ P
Sbjct: 162 FVIHTPTQTASKWWPGGLGKVSTHAVVYARL--ITNGKDYGIHGFIVQLRSLEDHSPLPN 219
Query: 227 FSTAQKLDKLGMRGSNT---GELVFEDCKVPAANLLGQENK----GVYV-------LMSG 272
+ K+G N+ G L+F+ ++P +L + +K G YV L+ G
Sbjct: 220 ITVGDIGTKMGNGAYNSMDNGFLMFDHVRIPRDQMLMRLSKVTREGEYVPSDVPKQLVYG 279
Query: 273 -LDLERLVLAAGPVGLMQAAIDTAFLYAHTRKQFGKNIG--EFQLIQGK 318
+ R + A + A+ A Y+ R+QFG + G E Q+I K
Sbjct: 280 TMVYVRQTIVADASNALSRAVCIATRYSAVRRQFGAHNGGIETQVIDYK 328
>At2g35690.1 68415.m04377 acyl-CoA oxidase, putative strong
similarity to acyl-CoA oxidase [Arabidopsis thaliana]
GI:3044214
Length = 664
Score = 47.6 bits (108), Expect = 2e-05
Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 34/229 (14%)
Query: 122 HSNLCVNQINRNGTEEQKSKYLPKLCSGEHIGALAMSEPGSGSDVVSMKLRA--EKKGDY 179
H + V I GTE+Q+ K+L + IG A +E G GS+V ++ A + K D
Sbjct: 102 HWGMFVPAIKGQGTEQQQQKWLSLATKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDQ 161
Query: 180 YVLN-----GNKFWITN-GPDADVLVVYAKTNWSTSKQQHGISAFLIE-------KDYPG 226
++++ +K+W G + V+YA+ T+ + HG+ F+++ PG
Sbjct: 162 FIIHSPTQTSSKWWPGGLGKVSTHAVIYARL--ITNGKDHGVHGFIVQLRSLDDHSPLPG 219
Query: 227 FSTAQKLDKLGMRGSNT---GELVFEDCKVPAANLLGQENK----GVYV-------LMSG 272
+ K G N+ G L+F+ ++P +L + +K G YV L+ G
Sbjct: 220 ITVGDIGMKFGNGAYNSMDNGFLMFDHFRIPRDQMLMRLSKVTREGKYVASDVPRQLVYG 279
Query: 273 -LDLERLVLAAGPVGLMQAAIDTAFLYAHTRKQFGKNIG--EFQLIQGK 318
+ R + + + A+ A Y+ R+QFG + G E Q+I K
Sbjct: 280 TMVYVRQSIVSNASTALARAVCIATRYSAVRRQFGSHDGGIETQVINYK 328
>At1g06290.1 68414.m00665 acyl-CoA oxidase (ACX3) identical to
acyl-CoA oxidase ACX3 [Arabidopsis thaliana] GI:8163758,
GI:8515709
Length = 675
Score = 47.6 bits (108), Expect = 2e-05
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 115 IALSYGAHSNLCVNQINRNGTEEQKSKYLPKLCSGEHIGALAMSEPGSGSDV--VSMKLR 172
+++ G H L N + GT+ K+L G AM+E G GS+V +
Sbjct: 146 VSIKVGVHFFLWGNAVKFFGTKRHHEKWLKNTEDYVVKGCFAMTELGHGSNVRGIETVTT 205
Query: 173 AEKKGDYYVLN-----GNKFWITNGPD-ADVLVVYAKTNWS-TSKQQHGISAFLIEKD-- 223
+ K + +V+N K+WI + A +V+++ + + T++ H A + ++D
Sbjct: 206 YDPKTEEFVINTPCESAQKYWIGGAANHATHTIVFSQLHINGTNQGVHAFIAQIRDQDGS 265
Query: 224 -YPGFSTAQKLDKLGMRGSNTGELVFEDCKVPAANLL 259
P A K+G+ G + G + F++ ++P NLL
Sbjct: 266 ICPNIRIADCGHKIGLNGVDNGRIWFDNLRIPRENLL 302
>At1g06310.1 68414.m00667 acyl-CoA oxidase, putative strong
similarity to acyl-CoA oxidase ACX3 GI:8163758 from
[Arabidopsis thaliana]
Length = 675
Score = 41.1 bits (92), Expect = 0.001
Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 16/159 (10%)
Query: 115 IALSYGAHSNLCVNQINRNGTEEQKSKYLPKLCSGEHIGALAMSEPGSGSDV--VSMKLR 172
++ G H L N + GT+ K+L G AM+E G G++V +
Sbjct: 146 LSAKLGVHFLLWGNAVKFFGTKRHHEKWLKDTEDYVVKGCFAMTELGHGTNVRGIETVTT 205
Query: 173 AEKKGDYYVLN-----GNKFWITNGPD-ADVLVVYAKTNWSTSKQQHGISAFLIE-KDY- 224
+ + +V+N K+WI + A+ +V ++ + + + Q GI F+ + +D+
Sbjct: 206 YDPTTEEFVINTPCESAQKYWIGEAANHANHAIVISQLSMNGTNQ--GIHVFIAQIRDHD 263
Query: 225 ----PGFSTAQKLDKLGMRGSNTGELVFEDCKVPAANLL 259
P A K+G+ G + G + F++ ++P NLL
Sbjct: 264 GNTCPNVRIADCGHKIGLNGVDNGRIWFDNLRIPRENLL 302
>At4g26450.1 68417.m03805 expressed protein
Length = 1248
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 123 SNLCVNQINRNGTEEQKSKYLPKLCSGEHIGALAMSEPGSGSDV 166
SN + I R+ +E++ LP L +G + PG GSD+
Sbjct: 410 SNSFPSSILRDNSEKESGLELPNLHRSHSVGKVGEKRPGEGSDL 453
>At2g19230.1 68415.m02245 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 877
Score = 28.7 bits (61), Expect = 7.6
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 103 VIMEELSRAS--GGIALSYGAHSNLCVNQINRNGTEEQKSKYLPKLCS 148
++ E+L S G ++L G + +LCV+ RN E+K +P + S
Sbjct: 477 ILPEKLLERSKDGSLSLRVGGNPDLCVSDSCRNKKTERKEYIIPSVAS 524
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.135 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,962,191
Number of Sequences: 28952
Number of extensions: 440470
Number of successful extensions: 960
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 941
Number of HSP's gapped (non-prelim): 11
length of query: 416
length of database: 12,070,560
effective HSP length: 83
effective length of query: 333
effective length of database: 9,667,544
effective search space: 3219292152
effective search space used: 3219292152
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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