GeneModel BLAST Result against arabidopsis

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000235-TA|BGIBMGA000235-PA|IPR002650|ATP-sulfurylase
         (261 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g19920.1 68414.m02497 sulfate adenylyltransferase 2 / ATP-sul...   380   e-106
At4g14680.1 68417.m02256 sulfate adenylyltransferase 3 / ATP-sul...   374   e-104
At5g43780.1 68418.m05354 sulfate adenylyltransferase 4 / ATP-sul...   372   e-103
At3g22890.1 68416.m02885 sulfate adenylyltransferase 1 / ATP-sul...   369   e-103
At2g34350.1 68415.m04204 nodulin-related weak similarity to nodu...    29   2.4  
At4g22970.1 68417.m03315 peptidase C50 family protein contains P...    28   7.3  
At5g39430.1 68418.m04776 hypothetical protein                          27   9.6  
At5g22020.1 68418.m02562 strictosidine synthase family protein s...    27   9.6  

>At1g19920.1 68414.m02497 sulfate adenylyltransferase 2 /
           ATP-sulfurylase 2 (ASA1) (MET3-1) (APS2) identical to
           ATP sulfurylase (APS2) [Arabidopsis thaliana] GI:1575324
          Length = 476

 Score =  380 bits (935), Expect = e-106
 Identities = 168/254 (66%), Positives = 210/254 (82%)

Query: 2   IKDSGDWLVGGTLEVFERIRWNDGLDSYRLTPNELRQKFKDLGADAVFAFQLRNPIHNGH 61
           I  SG+WL+GG LEVFE I++NDGLD YRL+P +LR++F +  ADAVFAFQLRNP+HNGH
Sbjct: 211 ITPSGNWLIGGDLEVFEPIKYNDGLDHYRLSPKQLREEFDNRQADAVFAFQLRNPVHNGH 270

Query: 62  ALLMQDTQRQLVERGFKKPVLLLHPLGGWTKDDDVPLEVRIKQHKAVLKEGVLDPNSTVL 121
           ALLM DT+++L+E G+K PVLLLHPLGG+TK DDVPL+VR++QH  VL++GVLDP +T++
Sbjct: 271 ALLMNDTRKRLLEMGYKNPVLLLHPLGGFTKADDVPLDVRMEQHSKVLEDGVLDPKTTIV 330

Query: 122 AIFPSPMMYAGPTEVQWHAKCRMNAGANHYIVGRDPAGLPYPRGDGDLYDPRHGAMLLKV 181
           +IFPSPM YAGPTEVQWHAK R+NAGAN YIVGRDPAG+ +P    DLYDP HG  +L +
Sbjct: 331 SIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPTEKRDLYDPDHGKRVLSM 390

Query: 182 APGLNDLEIIPFRVAAYDTSVGKMAFFDPTRKEDFDFISGTRMRGLAKAGKEPPRGFMAP 241
           APGL  L I+PFRVAAYDT   KMAFFDP+R ++F FISGT+MR  A+ G+ PP GFM P
Sbjct: 391 APGLEKLNILPFRVAAYDTIEKKMAFFDPSRAKEFLFISGTKMRTYARTGENPPDGFMCP 450

Query: 242 TAWNVLAEYYQSMK 255
           + WNVL +YY+S++
Sbjct: 451 SGWNVLVKYYESLQ 464


>At4g14680.1 68417.m02256 sulfate adenylyltransferase 3 /
           ATP-sulfurylase 3 (APS3) identical to ATP sulfurylase
           (APS3) [Arabidopsis thaliana] GI:1575327
          Length = 465

 Score =  374 bits (919), Expect = e-104
 Identities = 167/253 (66%), Positives = 206/253 (81%)

Query: 2   IKDSGDWLVGGTLEVFERIRWNDGLDSYRLTPNELRQKFKDLGADAVFAFQLRNPIHNGH 61
           I ++GDWL+GG LEV E +++NDGLD +RL+P ELR++ +  GADAVFAFQLRNP+HNGH
Sbjct: 199 ITNAGDWLIGGDLEVLEPVKYNDGLDRFRLSPFELRKELEKRGADAVFAFQLRNPVHNGH 258

Query: 62  ALLMQDTQRQLVERGFKKPVLLLHPLGGWTKDDDVPLEVRIKQHKAVLKEGVLDPNSTVL 121
           ALLM DT+R+L+E G+K P+LLLHPLGG+TK DDVPL  R+KQH+ VL++GVLDP +TV+
Sbjct: 259 ALLMTDTRRRLLEMGYKNPILLLHPLGGFTKADDVPLSWRMKQHEKVLEDGVLDPETTVV 318

Query: 122 AIFPSPMMYAGPTEVQWHAKCRMNAGANHYIVGRDPAGLPYPRGDGDLYDPRHGAMLLKV 181
           +IFPSPM+YAGPTEVQWHAK R+NAGAN YIVGRDPAG+ +P    DLYD  HG  +L +
Sbjct: 319 SIFPSPMLYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPVEKRDLYDADHGKKVLSM 378

Query: 182 APGLNDLEIIPFRVAAYDTSVGKMAFFDPTRKEDFDFISGTRMRGLAKAGKEPPRGFMAP 241
           APGL  L I+PFRVAAYD + GKMAFFDP+R +DF FISGT+MR LAK  + PP GFM P
Sbjct: 379 APGLERLNILPFRVAAYDKTQGKMAFFDPSRAQDFLFISGTKMRALAKNRENPPDGFMCP 438

Query: 242 TAWNVLAEYYQSM 254
             W VL +YY S+
Sbjct: 439 GGWKVLVDYYDSL 451


>At5g43780.1 68418.m05354 sulfate adenylyltransferase 4 /
           ATP-sulfurylase 4 (APS4) identical to ATP sulfurylase
           precursor (APS4) [Arabidopsis thaliana] GI:4633131
          Length = 469

 Score =  372 bits (916), Expect = e-103
 Identities = 165/256 (64%), Positives = 210/256 (82%)

Query: 2   IKDSGDWLVGGTLEVFERIRWNDGLDSYRLTPNELRQKFKDLGADAVFAFQLRNPIHNGH 61
           I  +G+WL+GG L+V E I++NDGLD +RL+P++LR++F   GADAVFAFQLRNP+HNGH
Sbjct: 201 ITKAGNWLIGGDLQVLEPIKYNDGLDRFRLSPSQLREEFIRRGADAVFAFQLRNPVHNGH 260

Query: 62  ALLMQDTQRQLVERGFKKPVLLLHPLGGWTKDDDVPLEVRIKQHKAVLKEGVLDPNSTVL 121
           ALLM DT+R+L+E G+K PVLLL+PLGG+TK DDVPL  R++QH+ VL++GVLDP +TV+
Sbjct: 261 ALLMTDTRRRLLEMGYKNPVLLLNPLGGFTKADDVPLSWRMRQHEKVLEDGVLDPETTVV 320

Query: 122 AIFPSPMMYAGPTEVQWHAKCRMNAGANHYIVGRDPAGLPYPRGDGDLYDPRHGAMLLKV 181
           +IFPSPM+YAGPTEVQWHAK R+NAGAN YIVGRDPAG+ +P    DLYD  HG  +L +
Sbjct: 321 SIFPSPMLYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPTEKRDLYDADHGKKVLSM 380

Query: 182 APGLNDLEIIPFRVAAYDTSVGKMAFFDPTRKEDFDFISGTRMRGLAKAGKEPPRGFMAP 241
           APGL  L I+PF+VAAYD + GKMAFFDP+R +DF FISGT+MRGLAK  + PP GFM P
Sbjct: 381 APGLERLNILPFKVAAYDKTQGKMAFFDPSRSQDFLFISGTKMRGLAKKKENPPDGFMCP 440

Query: 242 TAWNVLAEYYQSMKSK 257
           + W VL +YY S+ ++
Sbjct: 441 SGWKVLVDYYDSLSAE 456


>At3g22890.1 68416.m02885 sulfate adenylyltransferase 1 /
           ATP-sulfurylase 1 (APS1) nearly identical to ATP
           sulfurylase (APS1) [Arabidopsis thaliana] GI:6606509
          Length = 463

 Score =  369 bits (909), Expect = e-103
 Identities = 165/253 (65%), Positives = 206/253 (81%)

Query: 2   IKDSGDWLVGGTLEVFERIRWNDGLDSYRLTPNELRQKFKDLGADAVFAFQLRNPIHNGH 61
           I ++G+WL+GG LEV E +++NDGLD +RL+P ELR++ +   ADAVFAFQLRNP+HNGH
Sbjct: 197 ITNAGNWLIGGDLEVLEPVKYNDGLDRFRLSPAELRKELEKRNADAVFAFQLRNPVHNGH 256

Query: 62  ALLMQDTQRQLVERGFKKPVLLLHPLGGWTKDDDVPLEVRIKQHKAVLKEGVLDPNSTVL 121
           ALLM DT+R+L+E G+K P+LLLHPLGG+TK DDVPL+ R+KQH+ VL++GVLDP +TV+
Sbjct: 257 ALLMTDTRRRLLEMGYKNPILLLHPLGGFTKADDVPLDWRMKQHEKVLEDGVLDPETTVV 316

Query: 122 AIFPSPMMYAGPTEVQWHAKCRMNAGANHYIVGRDPAGLPYPRGDGDLYDPRHGAMLLKV 181
           +IFPSPM YAGPTEVQWHAK R+NAGAN YIVGRDPAG+ +P    DLYD  HG  +L +
Sbjct: 317 SIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPVEKRDLYDADHGKKVLSM 376

Query: 182 APGLNDLEIIPFRVAAYDTSVGKMAFFDPTRKEDFDFISGTRMRGLAKAGKEPPRGFMAP 241
           APGL  L I+PFRVAAYD + GKMAFFDP+R +DF FISGT+MR LAK  + PP GFM P
Sbjct: 377 APGLERLNILPFRVAAYDKTQGKMAFFDPSRPQDFLFISGTKMRTLAKNNENPPDGFMCP 436

Query: 242 TAWNVLAEYYQSM 254
             W VL +YY+S+
Sbjct: 437 GGWKVLVDYYESL 449


>At2g34350.1 68415.m04204 nodulin-related weak similarity to
           nodule-specific protein Nlj70 [Lotus japonicus]
           GI:3329366
          Length = 525

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 171 DPRHGAMLLKVAPGLNDLEIIPFRVAAYDTSV 202
           DPR+  +LL V P L  L ++PF V  YDT +
Sbjct: 176 DPRNYILLLAVVPSLLILTLMPF-VRTYDTVI 206


>At4g22970.1 68417.m03315 peptidase C50 family protein contains Pfam
           PF03568: Peptidase family C50
          Length = 1773

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 2/40 (5%)

Query: 70  RQLVERGFKKPVLLLHPLGGWTKDDDVPLEVRIKQHKAVL 109
           +QL ++ ++K +LLL  +GGW +  D   +V  K H+A++
Sbjct: 183 QQLDDKRYRKVLLLLEEVGGWLRVLDA--KVYEKLHRAMV 220


>At5g39430.1 68418.m04776 hypothetical protein 
          Length = 511

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 7/76 (9%)

Query: 44  GADAVFAFQLRNPIHNGHALLMQDTQRQLVERGFKKPVLLLHPLGGWTKDDDVPLEVRIK 103
           G   V  F+LR    N  +   QD+ ++LVE   +K       + G+ KD+ VP   R+K
Sbjct: 337 GMSIVLYFKLRENFKNEISQQYQDSIKKLVEDEMEK-------VKGFAKDNIVPFRERLK 389

Query: 104 QHKAVLKEGVLDPNST 119
               ++    L  +ST
Sbjct: 390 IVAGLVNPDELSLSST 405


>At5g22020.1 68418.m02562 strictosidine synthase family protein
           similar to SP|P15324 Strictosidine synthase precursor
           (EC 4.3.3.2) {Rauvolfia mannii}; contains Pfam profile
           PF03088: Strictosidine synthase
          Length = 395

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 149 NHYIVGRDPAGLPYPRGDGDLYDPRHGAMLLKVAP 183
           N +I GR P GL + +  GDLY       LLKV P
Sbjct: 131 NEHICGR-PLGLRFDKRTGDLYIADAYMGLLKVGP 164


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.321    0.139    0.436 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,863,777
Number of Sequences: 28952
Number of extensions: 303500
Number of successful extensions: 511
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 507
Number of HSP's gapped (non-prelim): 8
length of query: 261
length of database: 12,070,560
effective HSP length: 80
effective length of query: 181
effective length of database: 9,754,400
effective search space: 1765546400
effective search space used: 1765546400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 58 (27.5 bits)