Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000234-TA|BGIBMGA000234-PA|IPR002891|Adenylylsulfate
kinase, IPR002650|ATP-sulfurylase
         (475 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    28   0.16 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    27   0.29 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   6.2  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   8.2  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   8.2  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 27.9 bits (59), Expect = 0.16
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 4/104 (3%)

Query: 57  PTNAEAAHP--KILPKNKXXXXXXXXXXXXXXXXXXXXXXTNVVEQKHQVSRAKRS-RAL 113
           PT    +HP  K++P ++                       N++++K    + K   + +
Sbjct: 38  PTYGTTSHPTSKLVPPDERITYSWTEINAFANVSPSKTKFFNLIKRKDSPVQKKHILKNV 97

Query: 114 GSRAFRGSTVWFTGLSGAGKTSIAFALEAYLVSKATTELGQRAV 157
              A+ G  +   G SGAGKT++   L  +  S  T   G R V
Sbjct: 98  FGVAYPGELLAILGSSGAGKTTLLNTLTFHTSSNLTVS-GLRCV 140


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 27.1 bits (57), Expect = 0.29
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 4/104 (3%)

Query: 57  PTNAEAAHP--KILPKNKXXXXXXXXXXXXXXXXXXXXXXTNVVEQKHQVSRAKRS-RAL 113
           PT    +HP  K++P ++                       N++++K    + K   + +
Sbjct: 38  PTYGTTSHPTSKLVPPDERITYSWTEINAFANVSPPKTKFFNLIKRKDSPVQKKHILKNV 97

Query: 114 GSRAFRGSTVWFTGLSGAGKTSIAFALEAYLVSKATTELGQRAV 157
              A+ G  +   G SGAGKT++   L  +  S  T   G R V
Sbjct: 98  FGVAYPGELLAILGSSGAGKTTLLNTLTFHTSSNLTVS-GLRCV 140


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 396 LPDGSLVNQSVPVVLPVSAELKERLAGAAAVAL 428
           L + + + + VP + PV   L   L  AAA AL
Sbjct: 105 LSERAALLRGVPTLSPVGVALPPTLPAAAAAAL 137


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 259 EVCEQRDTKGLYKKARDGQIKG 280
           E+ E+ D +G Y+K  + +IKG
Sbjct: 103 ELEEKYDKEGEYRKKYEAEIKG 124


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)

Query: 171 NDIVVGIPAYG 181
           N +++GIPAYG
Sbjct: 283 NKLILGIPAYG 293


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.133    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,374
Number of Sequences: 317
Number of extensions: 3626
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 5
length of query: 475
length of database: 114,650
effective HSP length: 59
effective length of query: 416
effective length of database: 95,947
effective search space: 39913952
effective search space used: 39913952
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)