Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000234-TA|BGIBMGA000234-PA|IPR002891|Adenylylsulfate
kinase, IPR002650|ATP-sulfurylase
(475 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1782.11 |met14||adenylyl-sulfate kinase |Schizosaccharomyces... 169 6e-43
SPBC27.08c |sua1|SPBC28F2.01c|sulfate adenylyltransferase |Schiz... 44 6e-05
SPCC1739.06c |||uroporphyrin methyltransferase |Schizosaccharomy... 29 1.4
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 28 2.5
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 27 4.3
SPBC336.04 |cdc6|pol3, pold, mis10|DNA polymerase delta catalyti... 27 4.3
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 27 4.3
SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein 5|... 27 5.7
SPBC25B2.04c |||mitochondrial ribosome assembly protein|Schizosa... 27 5.7
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 27 5.7
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 27 7.6
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 27 7.6
>SPAC1782.11 |met14||adenylyl-sulfate kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 169 bits (412), Expect = 6e-43
Identities = 77/147 (52%), Positives = 106/147 (72%)
Query: 176 GIPAYGLDGDNIRTGLNKNLGFTKEDREENIRRVAEVAKLFADSGVVCLCSFVSPFAEDR 235
G+ Y LDGDN+R GLN +LGF+++DR ENIRR+ VAKLFAD+ VV + SF+SP+ +DR
Sbjct: 53 GVTTYRLDGDNVRFGLNSDLGFSEQDRNENIRRIGHVAKLFADACVVAVTSFISPYRKDR 112
Query: 236 EVARRIHTDSDLPFFEVFIDTPLEVCEQRDTKGLYKKARDGQIKGFTGITQEYERPEAPE 295
+ AR H LPF EV+++ P+EV EQRD KGLYK+AR G+IK FTGI+ YE P +PE
Sbjct: 113 DQAREFHKKDGLPFIEVYVECPVEVAEQRDPKGLYKRARAGEIKEFTGISAPYEAPISPE 172
Query: 296 LIVSTVGRSIVESTMDVIRLLESQGII 322
++VS+ +SI E ++ L + +I
Sbjct: 173 IVVSSHTQSIEECVEKIVNYLLEKDLI 199
>SPBC27.08c |sua1|SPBC28F2.01c|sulfate adenylyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 43.6 bits (98), Expect = 6e-05
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Query: 347 EEAARLPQIELTTLDLQWVQVLSEGWAYPLKGFMRETEYLQALHSNCVTLPDGSLVNQSV 406
+EA LP+I L+ V+++ G PL GFM + +YL + + + L G + +
Sbjct: 22 QEATSLPKIVLSERQFCDVELILNGGFSPLDGFMNQKDYLNVVEN--LRLSTGEVF--PI 77
Query: 407 PVVLPVSAELKERLAGAAAVAL--TRGGRP-LAVLRGPEFYPHRKEERCSRQFGIYHAGH 463
P+ L ++ + L VAL R G+ +A+L + Y K + FG H
Sbjct: 78 PITLDLNESQADSLKAGDRVALLDPRDGQTVIAILTVEDKYTPDKANEAEKVFGANDRAH 137
Query: 464 PYI 466
P +
Sbjct: 138 PAV 140
>SPCC1739.06c |||uroporphyrin methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 496
Score = 29.1 bits (62), Expect = 1.4
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 342 LTSAIEEAARLPQIELTTLDLQWVQVLSEGWAYPLKGFMRETE-YLQALHSNCVTLPDGS 400
+ AIE R+ I T QW+ +S+ W PL+ +R TE L A+ S+ +LP S
Sbjct: 167 MPEAIERFGRVRAITKTPEKKQWINHVSDFW--PLEKLVRMTEDDLLAIVSDNFSLPLSS 224
Query: 401 LVNQSV 406
+ S+
Sbjct: 225 SQSSSL 230
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 115 SRAFRGSTVWFTGLSGAGKTSIAFALEAYLVSK 147
S+ F G V F G +G GKT++A A+ L K
Sbjct: 59 SKKFGGKGVLFAGGAGTGKTALALAIAQELGPK 91
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/58 (29%), Positives = 24/58 (41%)
Query: 201 DREENIRRVAEVAKLFADSGVVCLCSFVSPFAEDREVARRIHTDSDLPFFEVFIDTPL 258
D+E RR+ A + AD GVVC+ F DR + + + I T L
Sbjct: 396 DKETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRVAIHEVMEQQTVTIAKAGIHTSL 453
>SPBC336.04 |cdc6|pol3, pold, mis10|DNA polymerase delta catalytic
subunit Cdc6 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1086
Score = 27.5 bits (58), Expect = 4.3
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 265 DTKGLYKKARDGQIKGFTGITQEYERPEAPELIVSTVGRSIVESTMDVI 313
D + L K + GFTG T A V++ GR ++E T DV+
Sbjct: 673 DGRQLALKVSANSVYGFTGATNGRLPCLAISSSVTSYGRQMIEKTKDVV 721
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 27.5 bits (58), Expect = 4.3
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 281 FTGITQEYERPEAPELIVSTVGRSIVESTMDVIRLLESQGIIPSLESNRSGVEELFIHGN 340
F+ + + P+ +L+V V +D++R+ QG+IP + S V+ F HG
Sbjct: 728 FSDLGYLLQHPQVKKLVVDDT--RYVHQYIDLLRVF--QGVIPQQRAILSHVQWDFPHGK 783
Query: 341 RLTSAIEEAARL 352
+ ++ A L
Sbjct: 784 NILFVMQRVAML 795
>SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein
5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 736
Score = 27.1 bits (57), Expect = 5.7
Identities = 16/53 (30%), Positives = 22/53 (41%)
Query: 103 QVSRAKRSRALGSRAFRGSTVWFTGLSGAGKTSIAFALEAYLVSKATTELGQR 155
+V A R L S +W T L G + F L AYL +K E ++
Sbjct: 619 KVDEATREDMLMSAETPDDILWITTLISTGSSMSHFPLHAYLEAKERQEFTKK 671
>SPBC25B2.04c |||mitochondrial ribosome assembly
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 328
Score = 27.1 bits (57), Expect = 5.7
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 123 VWFTGLSGAGKTSIAFALEAYLVSKATTELGQRAVEKNRKVGKFINITNDIVVGIPAYGL 182
V+F G+ GK+SI +L + K+ + + +++ + + + ND+ V Y L
Sbjct: 148 VYFVGMPNTGKSSILNSLRNVALRKSKSAIVGNYPGVTKRISEIVRLFNDMDV----YML 203
Query: 183 DGDNIRT 189
D I T
Sbjct: 204 DTPGIMT 210
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 27.1 bits (57), Expect = 5.7
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 385 YLQALHSNCVTLPDGSLVNQSVPVVLPVSAELKERLAGAAAVALTRGGRP-LAVLRGPEF 443
+ Q LHS+ + DG+ ++Q+V R A ++A R GR + F
Sbjct: 375 FRQNLHSSSTAVGDGASIHQNVARRAMSGNARAYRQAVETSIAGVRDGRKNYSASHIKSF 434
Query: 444 YPHRKEERCSRQFGIYHAGHPYIKDS 469
R+ E + + GI + + +D+
Sbjct: 435 QDQRRREEFANKMGIKNNTKKHFRDA 460
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 26.6 bits (56), Expect = 7.6
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 385 YLQALHSNCVTLPDGSLVNQSVPVVLPVSAELKERLAGAAAVAL 428
+LQ ++ VT P V SVP+ LP E+ AG+ A A+
Sbjct: 40 HLQDGPASPVTAPAAQPVESSVPLPLPKRKSSVEKRAGSVASAV 83
>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 120 GSTVWFTGLSGAGKTSIAFALEAYL 144
G V F GL +GKTS A L YL
Sbjct: 9 GLCVCFVGLPASGKTSSAMKLSRYL 33
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.133 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,922,767
Number of Sequences: 5004
Number of extensions: 74400
Number of successful extensions: 230
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 220
Number of HSP's gapped (non-prelim): 15
length of query: 475
length of database: 2,362,478
effective HSP length: 75
effective length of query: 400
effective length of database: 1,987,178
effective search space: 794871200
effective search space used: 794871200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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