Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000234-TA|BGIBMGA000234-PA|IPR002891|Adenylylsulfate
kinase, IPR002650|ATP-sulfurylase
(475 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0980 + 23107348-23107420,23107876-23108025,23108875-231090... 160 2e-39
11_06_0485 + 24133312-24133585,24136352-24136492,24136593-241367... 156 3e-38
03_05_1092 - 30331323-30331463,30331562-30331648,30331825-303320... 118 8e-27
04_01_0065 - 636957-637082,637165-637251,637365-637625,637695-63... 87 4e-17
05_01_0498 + 4152729-4152820,4153316-4153425,4153840-4153877,415... 34 0.21
12_01_0808 + 7418878-7420476 33 0.37
07_03_1444 - 26578007-26578117,26578370-26578474,26578971-265790... 32 1.1
05_05_0235 + 23510747-23510843,23511719-23511863,23512398-235124... 32 1.1
10_06_0164 + 11364436-11367280,11367357-11367715 31 1.5
10_01_0102 - 1244294-1245478 31 1.5
10_06_0165 + 11380807-11383585,11383628-11383734,11383782-11384018 31 2.0
07_01_0234 + 1715338-1718233,1718351-1718760 31 2.0
02_05_0938 + 32901143-32901215,32901841-32901982,32902243-329023... 31 2.0
01_05_0745 - 24852048-24853532 31 2.0
01_06_0509 - 29921224-29924589 31 2.6
01_01_0822 - 6401993-6402133,6402542-6402708,6402865-6402966,640... 31 2.6
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 30 3.5
02_02_0032 - 6227556-6227926,6228322-6231085 30 4.6
12_02_1144 + 26449490-26452292,26452401-26452742,26453141-26453160 29 6.1
02_04_0034 + 19073307-19073840 29 6.1
07_03_1749 + 29201116-29201193,29201294-29201371,29201442-292015... 29 8.1
01_07_0256 - 42328795-42329172,42330245-42330379,42330783-423310... 29 8.1
>07_03_0980 +
23107348-23107420,23107876-23108025,23108875-23109024,
23109166-23109284,23109384-23109468,23109927-23109973,
23110511-23110609
Length = 240
Score = 160 bits (389), Expect = 2e-39
Identities = 103/231 (44%), Positives = 132/231 (57%), Gaps = 36/231 (15%)
Query: 95 TNVVEQKHQVSRAKRSRALGSRAFRGSTVWFTGLSGAGKTSIAFALEAYLVSKATTELGQ 154
+N+ V +A R + L + G VW TGLSG+GK+++A L+ EL
Sbjct: 41 SNIFWHDCAVGQADRQKLLKQK---GCVVWITGLSGSGKSTLACTLDR--------ELHT 89
Query: 155 RAVEKNRKVGKFINITNDIVVGIPAYGLDGDNIRTGLNKNLGFTKEDREENIRRVAEVAK 214
R GK +Y LDGDN+R GLNK+LGF EDR ENIRRV EVAK
Sbjct: 90 R--------GKL------------SYVLDGDNLRHGLNKDLGFKAEDRAENIRRVGEVAK 129
Query: 215 LFADSGVVCLCSFVSPFAEDREVARRIHTDSDLPFFEVFIDTPLEVCEQRDTKGLYKKAR 274
LFAD+G+VC+ SF+SP+ DRE R + +D F EVF++ PLE+CE RD KGLYK AR
Sbjct: 130 LFADAGLVCIASFISPYRRDRESCRALLSDGS--FIEVFLNMPLELCESRDPKGLYKLAR 187
Query: 275 DGQIKGFTGITQEYERPEAPELIVSTV-GRSIVESTM--DVIRLLESQGII 322
G+IKGFTGI YE P E+ + V G S M V+ LE +G +
Sbjct: 188 AGKIKGFTGIDDPYESPLNSEIEIKEVDGVCPSPSDMAGQVVTYLEEKGFL 238
>11_06_0485 +
24133312-24133585,24136352-24136492,24136593-24136742,
24136837-24136955,24137062-24137146,24137218-24137264,
24137422-24137520
Length = 304
Score = 156 bits (379), Expect = 3e-38
Identities = 98/229 (42%), Positives = 130/229 (56%), Gaps = 36/229 (15%)
Query: 95 TNVVEQKHQVSRAKRSRALGSRAFRGSTVWFTGLSGAGKTSIAFALEAYLVSKATTELGQ 154
TN+ V++ R + L + G VW TGLSG+GK+++A AL + EL
Sbjct: 105 TNIRWHDCPVNQLDRQKLLNQK---GCVVWITGLSGSGKSTLACAL--------SRELHS 153
Query: 155 RAVEKNRKVGKFINITNDIVVGIPAYGLDGDNIRTGLNKNLGFTKEDREENIRRVAEVAK 214
R G Y LDGDN+R GLNK+L F +DR ENIRRV EVAK
Sbjct: 154 R--------------------GHLTYVLDGDNLRHGLNKDLSFKAKDRAENIRRVGEVAK 193
Query: 215 LFADSGVVCLCSFVSPFAEDREVARRIHTDSDLPFFEVFIDTPLEVCEQRDTKGLYKKAR 274
LFAD+G++C+ S +SP+ DR R++ +S F EVF++ PLEVCE+RD KGLYK AR
Sbjct: 194 LFADAGLICITSLISPYKSDRSACRKLLPNSS--FIEVFLNVPLEVCEERDPKGLYKLAR 251
Query: 275 DGQIKGFTGITQEYERPEAPELIVS-TVGRSIVESTM--DVIRLLESQG 320
G+IKGFTGI YE P E+++ VG +M V+ LE+ G
Sbjct: 252 AGKIKGFTGIDDPYETPSDCEIVIQCKVGDCPSPKSMADQVVSYLEANG 300
>03_05_1092 -
30331323-30331463,30331562-30331648,30331825-30332085,
30332231-30332636,30333702-30334240
Length = 477
Score = 118 bits (285), Expect = 8e-27
Identities = 63/135 (46%), Positives = 85/135 (62%), Gaps = 4/135 (2%)
Query: 339 GNRLTSAIEEAARLP-QIELTTLDLQWVQVLSEGWAYPLKGFMRETEYLQALHSNCVTLP 397
G R +A EAA L ++ L ++ +W+ VLSEGWA PL+GFMRE E+LQALH N +
Sbjct: 75 GGRREAARREAAALAHRVRLGRVETEWLHVLSEGWASPLRGFMREAEFLQALHFNAIRGG 134
Query: 398 DGSLVNQSVPVVLPVSAELKERL--AGAAAVALT-RGGRPLAVLRGPEFYPHRKEERCSR 454
DG++VN SVP+VLP+ + + +GA VAL RPLAVL E Y H KEER +R
Sbjct: 135 DGAMVNMSVPIVLPLGDAQRRAIEASGARRVALVDAADRPLAVLSDIEIYKHNKEERIAR 194
Query: 455 QFGIYHAGHPYIKDS 469
+G G PY+ ++
Sbjct: 195 TWGTTAPGLPYVDEA 209
>04_01_0065 -
636957-637082,637165-637251,637365-637625,637695-638100,
640036-640223
Length = 355
Score = 86.6 bits (205), Expect = 4e-17
Identities = 44/92 (47%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Query: 380 MRETEYLQALHSNCVTLPDGS-LVNQSVPVVLPVSAELKERLAGAAAVALTR-GGRPLAV 437
MRE EYLQ+LH NC+ LPDG+ +VN S+P+VL + KE + + VAL G LA+
Sbjct: 1 MREHEYLQSLHFNCIRLPDGAGVVNMSLPIVLAIGDREKEEIGSSPDVALHGPDGAVLAI 60
Query: 438 LRGPEFYPHRKEERCSRQFGIYHAGHPYIKDS 469
LR E YPH KEER +R +G G PY+ ++
Sbjct: 61 LRRVEIYPHNKEERIARTWGTTAPGLPYVDEA 92
>05_01_0498 +
4152729-4152820,4153316-4153425,4153840-4153877,
4154335-4154433,4154461-4157475
Length = 1117
Score = 34.3 bits (75), Expect = 0.21
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 308 STMDVIRLLESQ--GIIPSLESNRSGVEELFIHGNRLTSAI-EEAARLPQIELTTL 360
S++ + L +Q G+IP N SG+ L + GNRLT I EE RL Q+++ L
Sbjct: 371 SSLQSLNLANNQFSGVIPPEIGNLSGLTYLNLLGNRLTGGIPEELNRLSQLQVVDL 426
>12_01_0808 + 7418878-7420476
Length = 532
Score = 33.5 bits (73), Expect = 0.37
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 320 GIIPSLESNRSGVEELFIHGNRLTSAIEEA-ARLPQIELTTLDLQWVQVLSEGWAYPLKG 378
G +P+ SN S + LF++GNRLT A+ A +P+++ LD+ LS G L G
Sbjct: 116 GGVPAALSNASSLHSLFLYGNRLTGALPAALCDIPRLQ--NLDVS-RNALSGG----LPG 168
Query: 379 FMRETEYLQAL 389
+R LQ L
Sbjct: 169 DLRNCRSLQRL 179
>07_03_1444 -
26578007-26578117,26578370-26578474,26578971-26579030,
26579122-26579233,26579390-26579716,26579814-26579860
Length = 253
Score = 31.9 bits (69), Expect = 1.1
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 97 VVEQKHQVSRAKRSRALGSRAFRGSTVWFTGLSGAGKTSIAFALEAYLVSKATTELGQRA 156
++ Q V R+ R + S+ RG+ + GL +GK+S L ++L K G R
Sbjct: 28 LLPQWRGVFRSVRMESGSSQGGRGALIVLEGLDRSGKSSQCARLLSFLQGKGCQAEGWRF 87
Query: 157 VEKNRKVGKFIN 168
++ VG+ I+
Sbjct: 88 PDRGTSVGQMIS 99
>05_05_0235 +
23510747-23510843,23511719-23511863,23512398-23512469,
23512726-23512797,23512932-23513075,23513161-23513232,
23513330-23513401,23513499-23513573,23513657-23513725,
23514109-23514177,23514295-23514316,23515612-23515663,
23515883-23516133,23516212-23516346,23516615-23516968,
23517155-23517181,23517232-23517390
Length = 628
Score = 31.9 bits (69), Expect = 1.1
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 322 IPSLESNRSGVEELFIHGNRLTSAIEEAARLPQIELTTLDLQWVQV 367
IP+L N SG+ +L + L AI + + +PQ++ LDL W Q+
Sbjct: 237 IPTLYYNMSGLFKLSLRNCSLQGAIPDLSAIPQLDY--LDLSWNQL 280
>10_06_0164 + 11364436-11367280,11367357-11367715
Length = 1067
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 320 GIIPSLESNRSGVEELFIHGNRLTSAIEEA-ARLPQIELTTLDL 362
GIIP N S + ELF++ N LT I EA ++ +E L +
Sbjct: 207 GIIPQSLGNLSALSELFLNENHLTGPIPEALGKISSLERLALQV 250
>10_01_0102 - 1244294-1245478
Length = 394
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 320 GIIPSLESNRSGVEELFIHGNRLTSAI-EEAARLPQIELTTL 360
G +PS SN + ++EL++H N++T +I +E L ++L +L
Sbjct: 233 GELPSCLSNLTKMKELYLHQNQITGSIPKEIGMLANLQLLSL 274
>10_06_0165 + 11380807-11383585,11383628-11383734,11383782-11384018
Length = 1040
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 320 GIIPSLESNRSGVEELFIHGNRLTSAIEEA-ARLPQIELTTLDL 362
GIIP N S + E++++ N+L+ I E+ RL ++E+ L +
Sbjct: 190 GIIPPSLGNLSSLREMYLNDNQLSGPIPESLGRLSKLEMLALQV 233
>07_01_0234 + 1715338-1718233,1718351-1718760
Length = 1101
Score = 31.1 bits (67), Expect = 2.0
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 301 VGRSIVESTMDVIRLLESQGIIPSLESNRSGVEELFIHGN-RLTSAIEEAARLPQIELTT 359
+G S+ + + + +G +P N+S ++ELF+ GN +LT I + L
Sbjct: 208 IGSSLPNLEYLCLHVNQLEGPVPPSIFNKSRLQELFLWGNYKLTGPIPDNGSFSLPMLRW 267
Query: 360 LDLQW 364
+DL W
Sbjct: 268 IDLHW 272
>02_05_0938 +
32901143-32901215,32901841-32901982,32902243-32902314,
32902573-32902644,32902711-32902782,32902913-32902948,
32903001-32903072,32903319-32903387,32903483-32903554,
32903668-32903739,32903838-32903909,32904153-32904224,
32904470-32904541,32904623-32904694,32904782-32904853,
32904911-32905003,32905150-32905218,32905315-32905386,
32905479-32905552,32905643-32905771,32905966-32906331,
32906584-32906954,32907522-32907890
Length = 884
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 297 IVSTVGRSIVESTMDVIRLLESQGIIPSLESNRSGVEELFIHGNRLTSAI 346
I S +G + +D + + G IPS+ N + E+L++ GNRLT +I
Sbjct: 214 IPSVIGLMQALAVLD-LSFNQLSGPIPSILGNLTYTEKLYLQGNRLTGSI 262
>01_05_0745 - 24852048-24853532
Length = 494
Score = 31.1 bits (67), Expect = 2.0
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 294 PELIVSTVGRSIVESTMDVIRLLESQGIIPSLESNRSGVEELFIHGNRLTSAIEEAARLP 353
P+ + + +GR V+R G IP N + + L +HGN LTSAI +
Sbjct: 150 PQPVPAFLGRLGPAFRSLVLRENGHVGAIPPELGNLTALRVLDLHGNNLTSAIPATVQ-S 208
Query: 354 QIELTTLDLQWVQVLSE 370
L LDL + Q+ E
Sbjct: 209 LAHLQLLDLSYNQLAGE 225
>01_06_0509 - 29921224-29924589
Length = 1121
Score = 30.7 bits (66), Expect = 2.6
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 317 ESQGIIPSLESNRSGVEELFIHGNRLTSAIEEAARLPQIELTTLDLQWVQVLSEGWAYPL 376
E +G IP+ S G+E L + N LT +I P++ T L W+ + S + P+
Sbjct: 403 ELEGEIPASLSRIQGLEHLILDYNGLTGSIP-----PELAKCT-KLNWISLASNRLSGPI 456
Query: 377 KGFMRETEYLQAL 389
++ + YL L
Sbjct: 457 PSWLGKLSYLAIL 469
>01_01_0822 -
6401993-6402133,6402542-6402708,6402865-6402966,
6403437-6403577,6403685-6403768,6403858-6404164,
6404286-6404357
Length = 337
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 190 GLNKNLGFTKEDREENIRRVAEVAKLFADSGVVCLCSFVSPFAE 233
GL+ ++GF+ + EEN++R E+ K + D+ V F+ E
Sbjct: 3 GLDFDIGFSFDKFEENVKRFIELPKNYLDTAVDTAVEFMEDIHE 46
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 30.3 bits (65), Expect = 3.5
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
Query: 120 GSTVWFTGLSGAGKTSIAFALEAYLVSKATTELGQRAVEKNRKVGKFINITNDIVVGIPA 179
G T G G GKT I+ AL Y S+A +G E+ ++ + + + + +P
Sbjct: 262 GGTCAIPGAFGCGKTVISQALSKYSNSEAVVYVG--CGERGNEMAEVLMDFPQLTMTLPD 319
Query: 180 YGLDGDNIRTGLNKNL-GFTKEDREENIRRVAEVAKLFADSG--VVCLCSFVSPFAED-R 235
+ RT L N RE +I +A+ F D G V + S +AE R
Sbjct: 320 GREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALR 379
Query: 236 EVARRI 241
E++ R+
Sbjct: 380 EISGRL 385
>02_02_0032 - 6227556-6227926,6228322-6231085
Length = 1044
Score = 29.9 bits (64), Expect = 4.6
Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 312 VIRLLESQGIIPSLESNRSGVEELFIHGNRLTSAIEEAARLPQIELTTLDLQWVQVLSEG 371
++ + G IP+ +N S +E +++ LT + LP ++ LDL + Q+ +
Sbjct: 397 ILSTTQLNGPIPASLANMSKLEMIYLTATGLTGVVPSFGSLPNLQ--DLDLAYNQLEAGD 454
Query: 372 WAY 374
W++
Sbjct: 455 WSF 457
>12_02_1144 + 26449490-26452292,26452401-26452742,26453141-26453160
Length = 1054
Score = 29.5 bits (63), Expect = 6.1
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Query: 297 IVSTVGRSIVESTMDVIRLLESQ--GIIPSLESNRSGVEELFIHGNRLTSAIEEAARLPQ 354
I S VGR S++ V+ L ++ G IP + +E LF+ GN+ R+PQ
Sbjct: 543 IPSEVGRL---SSLGVLDLSNNRLSGEIPQALAGCQSMEYLFLQGNQF------GGRIPQ 593
Query: 355 IELTTLDLQWVQVLSEGWAYPLKGFMRETEYLQALH 390
++ LQ + + + P+ F+ +YL+ L+
Sbjct: 594 SLVSLKGLQHLDMSQNNLSGPIPDFLATFQYLRYLN 629
>02_04_0034 + 19073307-19073840
Length = 177
Score = 29.5 bits (63), Expect = 6.1
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 394 VTLPDGSLVNQSVPVVLPVSAELKERLAGAAAVALTRGGRPLAVLR 439
V LPDG + ++ PV+A R GAA A GRP ++R
Sbjct: 101 VRLPDGRVFDRVFDAARPVAALF--RYCGAAVAACGMAGRPFRLVR 144
>07_03_1749 +
29201116-29201193,29201294-29201371,29201442-29201540,
29202958-29203020,29203101-29203298,29203359-29203472,
29203744-29203806,29203912-29204208,29204774-29204935,
29205061-29205244,29205771-29205820
Length = 461
Score = 29.1 bits (62), Expect = 8.1
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 256 TPLEVCEQRDTKGLYKKARDGQIKGFTGITQE 287
TP E C TKG +KK R+ ++G+ +T+E
Sbjct: 301 TPPEFCTSNMTKGTFKKIREELMRGY-ALTKE 331
>01_07_0256 -
42328795-42329172,42330245-42330379,42330783-42331033,
42331290-42331341,42331619-42331647,42331812-42332105,
42332229-42332378,42333915-42334405,42334513-42334613,
42334941-42335037,42335882-42335950,42336036-42336122,
42336423-42336494,42336795-42336863,42337784-42337858,
42338230-42338301,42338378-42338449,42338533-42338676,
42339106-42339177,42339294-42339365,42339804-42339954,
42340204-42340297
Length = 1008
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 320 GIIPSLESNRSGVEELFIHGNRLTSAI-EEAARLPQIELTTLDLQWV 365
G IP N + ++ L ++GN+LT ++ EE LP ++ +D ++
Sbjct: 115 GSIPKEVGNITSLKLLLLNGNQLTGSLPEEIGFLPNLDRIQIDQNYI 161
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.133 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,602,195
Number of Sequences: 37544
Number of extensions: 501503
Number of successful extensions: 1511
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1484
Number of HSP's gapped (non-prelim): 37
length of query: 475
length of database: 14,793,348
effective HSP length: 85
effective length of query: 390
effective length of database: 11,602,108
effective search space: 4524822120
effective search space used: 4524822120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
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