Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000234-TA|BGIBMGA000234-PA|IPR002891|Adenylylsulfate
kinase, IPR002650|ATP-sulfurylase
(475 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g39940.1 68417.m05656 adenylylsulfate kinase 2 (AKN2) identic... 158 6e-39
At2g14750.1 68415.m01666 adenylylsulfate kinase 1 (AKN1) identic... 158 6e-39
At3g03900.1 68416.m00404 adenylylsulfate kinase, putative simila... 156 3e-38
At5g67520.1 68418.m08514 adenylylsulfate kinase, putative simila... 152 6e-37
At3g22890.1 68416.m02885 sulfate adenylyltransferase 1 / ATP-sul... 136 4e-32
At4g14680.1 68417.m02256 sulfate adenylyltransferase 3 / ATP-sul... 128 6e-30
At1g19920.1 68414.m02497 sulfate adenylyltransferase 2 / ATP-sul... 122 7e-28
At5g43780.1 68418.m05354 sulfate adenylyltransferase 4 / ATP-sul... 121 9e-28
At1g07390.1 68414.m00788 leucine-rich repeat family protein cont... 31 1.3
At2g37050.1 68415.m04546 leucine-rich repeat family protein / pr... 31 2.2
At1g33910.1 68414.m04203 avirulence-responsive family protein / ... 30 3.8
At3g49670.1 68416.m05429 leucine-rich repeat transmembrane prote... 29 5.1
At2g26330.1 68415.m03159 leucine-rich repeat protein kinase, put... 29 5.1
At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit... 29 5.1
At1g04300.1 68414.m00421 meprin and TRAF homology domain-contain... 29 5.1
At5g49760.1 68418.m06163 leucine-rich repeat family protein / pr... 29 6.7
At3g53830.1 68416.m05947 regulator of chromosome condensation (R... 29 6.7
At5g07180.1 68418.m00818 leucine-rich repeat family protein / pr... 29 8.9
At3g49820.1 68416.m05447 hypothetical protein 29 8.9
At1g17240.1 68414.m02100 leucine-rich repeat family protein cont... 29 8.9
>At4g39940.1 68417.m05656 adenylylsulfate kinase 2 (AKN2) identical
to adenylylsulfate kinase 2, chloroplast precursor (APS
kinase, Adenosine-5'phosphosulfate kinase, ATP
adenosine-5'- phosphosulfate 3'-phosphotransferase)
[Arabidopsis thaliana] SWISS-PROT:O49196
Length = 293
Score = 158 bits (384), Expect = 6e-39
Identities = 93/207 (44%), Positives = 118/207 (57%), Gaps = 33/207 (15%)
Query: 96 NVVEQKHQVSRAKRSRALGSRAFRGSTVWFTGLSGAGKTSIAFALEAYLVSKATTELGQR 155
N+V + + R R + L + G VW TGLSG+GK+++A AL SKA E G+
Sbjct: 94 NIVWHESSICRCDRQQLLQQK---GCVVWITGLSGSGKSTVACAL-----SKALFERGKL 145
Query: 156 AVEKNRKVGKFINITNDIVVGIPAYGLDGDNIRTGLNKNLGFTKEDREENIRRVAEVAKL 215
Y LDGDN+R GLN++L F E R ENIRR+ EVAKL
Sbjct: 146 T-----------------------YTLDGDNVRHGLNRDLTFKAEHRTENIRRIGEVAKL 182
Query: 216 FADSGVVCLCSFVSPFAEDREVARRIHTDSDLPFFEVFIDTPLEVCEQRDTKGLYKKARD 275
FAD GV+C+ S +SP+ DR+ R + D D F EVF+D PL VCE RD KGLYK AR
Sbjct: 183 FADVGVICIASLISPYRRDRDACRSLLPDGD--FVEVFMDVPLHVCESRDPKGLYKLARA 240
Query: 276 GQIKGFTGITQEYERPEAPELIVSTVG 302
G+IKGFTGI YE P E+++ G
Sbjct: 241 GKIKGFTGIDDPYEAPVNCEVVLKHTG 267
>At2g14750.1 68415.m01666 adenylylsulfate kinase 1 (AKN1) identical
to adenylylsulfate kinase 1, chloroplast precursor (APS
kinase, Adenosine-5'phosphosulfate kinase, ATP
adenosine-5'- phosphosulfate 3'-phosphotransferase)
[Arabidopsis thaliana] SWISS-PROT:Q43295
Length = 276
Score = 158 bits (384), Expect = 6e-39
Identities = 97/229 (42%), Positives = 129/229 (56%), Gaps = 34/229 (14%)
Query: 95 TNVVEQKHQVSRAKRSRALGSRAFRGSTVWFTGLSGAGKTSIAFALEAYLVSKATTELGQ 154
TN+ + V + R R L + G +W TGLSG+GK+++A A L Q
Sbjct: 79 TNIKWHECSVEKVDRQRLLDQK---GCVIWVTGLSGSGKSTLACA------------LNQ 123
Query: 155 RAVEKNRKVGKFINITNDIVVGIPAYGLDGDNIRTGLNKNLGFTKEDREENIRRVAEVAK 214
+K GK Y LDGDN+R GLN++L F EDR ENIRRV EVAK
Sbjct: 124 MLYQK----GKL------------CYILDGDNVRHGLNRDLSFKAEDRAENIRRVGEVAK 167
Query: 215 LFADSGVVCLCSFVSPFAEDREVARRIHTDSDLPFFEVFIDTPLEVCEQRDTKGLYKKAR 274
LFAD+G++C+ S +SP+ DR+ R + + D F EVF+D PL VCE RD KGLYK AR
Sbjct: 168 LFADAGIICIASLISPYRTDRDACRSLLPEGD--FVEVFMDVPLSVCEARDPKGLYKLAR 225
Query: 275 DGQIKGFTGITQEYERPEAPELIVSTV-GRSIVESTMDVIRLLESQGII 322
G+IKGFTGI YE P E+ + G S +E V+ L+++G +
Sbjct: 226 AGKIKGFTGIDDPYEPPLNCEISLGREGGTSPIEMAEKVVGYLDNKGYL 274
>At3g03900.1 68416.m00404 adenylylsulfate kinase, putative similar
to adenylylsulfate kinase 1, chloroplast precursor (APS
kinase, Adenosine-5'phosphosulfate kinase, ATP
adenosine-5'- phosphosulfate 3'-phosphotransferase)
[Arabidopsis thaliana] SWISS-PROT:Q43295
Length = 208
Score = 156 bits (378), Expect = 3e-38
Identities = 98/231 (42%), Positives = 134/231 (58%), Gaps = 36/231 (15%)
Query: 95 TNVVEQKHQVSRAKRSRALGSRAFRGSTVWFTGLSGAGKTSIAFALEAYLVSKATTELGQ 154
TN+ Q+ + + +R + L + G VW TGLSG+GK+++A +L + EL
Sbjct: 8 TNIFWQESPIGKTERQKLLNQK---GCVVWITGLSGSGKSTLACSL--------SRELNN 56
Query: 155 RAVEKNRKVGKFINITNDIVVGIPAYGLDGDNIRTGLNKNLGFTKEDREENIRRVAEVAK 214
R GK +Y LDGDN+R GLNK+LGF EDR ENIRRV EVAK
Sbjct: 57 R--------GKL------------SYILDGDNLRHGLNKDLGFKAEDRVENIRRVGEVAK 96
Query: 215 LFADSGVVCLCSFVSPFAEDREVARRIHTDSDLPFFEVFIDTPLEVCEQRDTKGLYKKAR 274
LFAD+G++C+ S +SP+ +DR+ R + +S F EVF++ L++CE RD KGLYK AR
Sbjct: 97 LFADAGLICIASLISPYRKDRDACREMIQNSS--FIEVFMNMSLQLCEARDPKGLYKLAR 154
Query: 275 DGQIKGFTGITQEYERPEAPEL-IVSTVGR--SIVESTMDVIRLLESQGII 322
G+IKGFTGI YE P E+ + G S V +VI LE +G +
Sbjct: 155 AGKIKGFTGIDDPYESPLNCEIELKEKEGECPSPVAMAEEVISYLEDKGFL 205
>At5g67520.1 68418.m08514 adenylylsulfate kinase, putative similar
to adenylylsulfate kinase, chloroplast precursor (APS
kinase, Adenosine-5'phosphosulfate kinase, ATP
adenosine-5'- phosphosulfate 3'-phosphotransferase)
[Catharanthus roseus] SWISS-PROT:O49204
Length = 310
Score = 152 bits (368), Expect = 6e-37
Identities = 87/203 (42%), Positives = 117/203 (57%), Gaps = 33/203 (16%)
Query: 96 NVVEQKHQVSRAKRSRALGSRAFRGSTVWFTGLSGAGKTSIAFALEAYLVSKATTELGQR 155
N+V V+++ R + + G +W TGLSG+GK+S+A AL R
Sbjct: 88 NIVWHDCPVTKSDRQELIKQK---GCVIWITGLSGSGKSSLACALS-------------R 131
Query: 156 AVEKNRKVGKFINITNDIVVGIPAYGLDGDNIRTGLNKNLGFTKEDREENIRRVAEVAKL 215
A+ K+ +Y LDGDN+R GLN +L F +DR ENIRRV EVAKL
Sbjct: 132 ALHNRGKL---------------SYILDGDNVRHGLNSDLSFEADDRAENIRRVGEVAKL 176
Query: 216 FADSGVVCLCSFVSPFAEDREVARRIHTDSDLPFFEVFIDTPLEVCEQRDTKGLYKKARD 275
FADSG++C+ S +SP+ +R R + D F EVF+D PL VCE RD KGLYK+AR
Sbjct: 177 FADSGIICIASLISPYRIERAACRALLPQGD--FIEVFMDVPLHVCEARDPKGLYKRARA 234
Query: 276 GQIKGFTGITQEYERPEAPELIV 298
G+IKGFTG+ YE P E+++
Sbjct: 235 GKIKGFTGVDDPYEAPLDCEIVI 257
>At3g22890.1 68416.m02885 sulfate adenylyltransferase 1 /
ATP-sulfurylase 1 (APS1) nearly identical to ATP
sulfurylase (APS1) [Arabidopsis thaliana] GI:6606509
Length = 463
Score = 136 bits (328), Expect = 4e-32
Identities = 67/137 (48%), Positives = 88/137 (64%), Gaps = 1/137 (0%)
Query: 334 ELFIHGNRLTSAIEEAARLPQIELTTLDLQWVQVLSEGWAYPLKGFMRETEYLQALHSNC 393
EL + + EAA LP++ELT +DLQW+ VLSEGWA PL GFMRE+E+LQ LH N
Sbjct: 60 ELIVEEPKRREKKHEAADLPRVELTAIDLQWMHVLSEGWASPLGGFMRESEFLQTLHFNS 119
Query: 394 VTLPDGSLVNQSVPVVLPVSAELKERLAGAAAVAL-TRGGRPLAVLRGPEFYPHRKEERC 452
+ L DGS+VN SVP+VL + E K R+ + VAL G P+A+L E Y H KEER
Sbjct: 120 LRLDDGSVVNMSVPIVLAIDDEQKARIGESTRVALFNSDGNPVAILSDIEIYKHPKEERI 179
Query: 453 SRQFGIYHAGHPYIKDS 469
+R +G G PY+ ++
Sbjct: 180 ARTWGTTAPGLPYVDEA 196
>At4g14680.1 68417.m02256 sulfate adenylyltransferase 3 /
ATP-sulfurylase 3 (APS3) identical to ATP sulfurylase
(APS3) [Arabidopsis thaliana] GI:1575327
Length = 465
Score = 128 bits (310), Expect = 6e-30
Identities = 63/146 (43%), Positives = 91/146 (62%), Gaps = 1/146 (0%)
Query: 325 LESNRSGVEELFIHGNRLTSAIEEAARLPQIELTTLDLQWVQVLSEGWAYPLKGFMRETE 384
+E + + +L + R EAA LP++ LT +DLQW+ VLSEGWA PL+GFMRE+E
Sbjct: 53 IEPDGGKLVDLVVPEPRRREKKHEAADLPRVRLTAIDLQWMHVLSEGWASPLRGFMRESE 112
Query: 385 YLQALHSNCVTLPDGSLVNQSVPVVLPVSAELKERLAGAAAVALT-RGGRPLAVLRGPEF 443
+LQ LH N + L DGS+VN SVP+VL + + K + + V+L P+A+L E
Sbjct: 113 FLQTLHFNLLNLDDGSVVNMSVPIVLAIDDQQKALIGESKRVSLVDSDDNPIAILNDIEI 172
Query: 444 YPHRKEERCSRQFGIYHAGHPYIKDS 469
Y H KEER +R +G G PY++++
Sbjct: 173 YKHPKEERIARTWGTTAPGLPYVEEA 198
>At1g19920.1 68414.m02497 sulfate adenylyltransferase 2 /
ATP-sulfurylase 2 (ASA1) (MET3-1) (APS2) identical to
ATP sulfurylase (APS2) [Arabidopsis thaliana] GI:1575324
Length = 476
Score = 122 bits (293), Expect = 7e-28
Identities = 58/136 (42%), Positives = 85/136 (62%), Gaps = 1/136 (0%)
Query: 334 ELFIHGNRLTSAIEEAARLPQIELTTLDLQWVQVLSEGWAYPLKGFMRETEYLQALHSNC 393
EL + + E+ +P+++L +DL+WV V+SEGWA PLKGFMRE EYLQ+LH N
Sbjct: 74 ELIVPETEIGVKKAESETMPKVKLNQIDLEWVHVISEGWASPLKGFMREDEYLQSLHFNS 133
Query: 394 VTLPDGSLVNQSVPVVLPVSAELKERLAGAAAVALT-RGGRPLAVLRGPEFYPHRKEERC 452
+ L +G+ VN S+P+VL + + KE++ + VAL G + LR E Y H KEER
Sbjct: 134 LRLKNGTFVNMSLPIVLAIDDDTKEQIGSSENVALVCPQGDIIGSLRSVEIYKHNKEERI 193
Query: 453 SRQFGIYHAGHPYIKD 468
+R +G G PY+++
Sbjct: 194 ARTWGTTSPGLPYVEE 209
>At5g43780.1 68418.m05354 sulfate adenylyltransferase 4 /
ATP-sulfurylase 4 (APS4) identical to ATP sulfurylase
precursor (APS4) [Arabidopsis thaliana] GI:4633131
Length = 469
Score = 121 bits (292), Expect = 9e-28
Identities = 63/147 (42%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 325 LESNRSGVEELFIHGNRLTSAIEEAARLP-QIELTTLDLQWVQVLSEGWAYPLKGFMRET 383
+E + + L + +R EA +P +I+L +DL+WV VLSEGWA PLKGFMR++
Sbjct: 54 IEPDGGKLMNLVVEESRRRVMKHEAETVPARIKLNRVDLEWVHVLSEGWASPLKGFMRQS 113
Query: 384 EYLQALHSNCVTLPDGSLVNQSVPVVLPVSAELKERLAGAAAVALTRG-GRPLAVLRGPE 442
E+LQ LH N L DGS+VN SVP+VL + + K R+ + V L G P+A+L E
Sbjct: 114 EFLQTLHFNSFRLEDGSVVNMSVPIVLAIDDDQKFRIGDSNQVTLVDSVGNPIAILNDIE 173
Query: 443 FYPHRKEERCSRQFGIYHAGHPYIKDS 469
Y H KEER +R +G G PY +++
Sbjct: 174 IYKHPKEERIARTWGTTARGLPYAEEA 200
>At1g07390.1 68414.m00788 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Hcr2-5D
[Lycopersicon esculentum] gi|3894393|gb|AAC78596
Length = 976
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 319 QGIIPSLESNRSGVEELFIHGNRLTSAIEEAARLPQIELTTLDL 362
QG I S +N +G+ LF+ GN T ++EE L LT LD+
Sbjct: 540 QGKIFSKHANLTGLVGLFLDGNNFTGSLEEGL-LKSKNLTLLDI 582
>At2g37050.1 68415.m04546 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 934
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 320 GIIPSLESNRSGVEELFIHGNRLTSAIEEAARLPQIELTTLD 361
G IPS +G+ EL++ GN T I + +R P +E+ L+
Sbjct: 428 GNIPSDLVKLTGLVELWLDGNSFTGPIPDFSRCPNLEIIHLE 469
>At1g33910.1 68414.m04203 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
SP|P54120 AIG1 protein {Arabidopsis thaliana}; contains
Pfam profile PF04548: AIG1 family
Length = 301
Score = 29.9 bits (64), Expect = 3.8
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 346 IEEAARLPQIELTTLDLQWVQVLSEGWAYPLKGFMRETEYLQALHSNCVTLPDGSLVNQS 405
I E + TLD Q + V+ + L T+Y+ NC+TL DG L +
Sbjct: 40 ILETVECKTCKAKTLDGQIINVIDTPGLFDLSV---STDYMNKEIINCLTLTDGGL--HA 94
Query: 406 VPVVLPVSAE-LKERLAGAAAVALTRGGR 433
V +VL V + LKE A + L G +
Sbjct: 95 VVLVLSVGTDILKEEEAALNKLQLLFGSK 123
>At3g49670.1 68416.m05429 leucine-rich repeat transmembrane protein
kinase, putative CLAVATA1 receptor kinase, Arabidopsis
thaliana, EMBL:ATU96879
Length = 1002
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 320 GIIPSLESNRSGVEELFIHGNRLTSAI-EEAARLPQI 355
G +P+ N SGV++L + GN+ + +I E RL Q+
Sbjct: 470 GSLPAAIGNLSGVQKLLLDGNKFSGSIPPEIGRLQQL 506
>At2g26330.1 68415.m03159 leucine-rich repeat protein kinase,
putative (ERECTA) identical to uncharacterized receptor
protein kinase ERECTA [Arabidopsis thaliana]
gi|1389566|dbj|BAA11869; contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain
Length = 976
Score = 29.5 bits (63), Expect = 5.1
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 297 IVSTVGRSIVESTMDVIRLLESQGIIPSLESNRSGVEELFIHGNRLTSAI 346
I S +G + +D+ L S G IP + N + E+L++H N+LT +I
Sbjct: 275 IPSVIGLMQALAVLDLSGNLLS-GSIPPILGNLTFTEKLYLHSNKLTGSI 323
>At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit A
/ V-ATPase A subunit / vacuolar proton pump alpha
subunit / V-ATPase 69 kDa subunit identical to SP|O23654
Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)
(V-ATPase A subunit) (Vacuolar proton pump alpha
subunit) (V-ATPase 69 kDa subunit) {Arabidopsis
thaliana}
Length = 623
Score = 29.5 bits (63), Expect = 5.1
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 6/126 (4%)
Query: 120 GSTVWFTGLSGAGKTSIAFALEAYLVSKATTELGQRAVEKNRKVGKFINITNDIVVGIPA 179
G T G G GKT I+ AL Y S A +G E+ ++ + + + + +P
Sbjct: 245 GGTCAIPGAFGCGKTVISQALSKYSNSDAVVYVG--CGERGNEMAEVLMDFPQLTMTLPD 302
Query: 180 YGLDGDNIRTGLNKNL-GFTKEDREENIRRVAEVAKLFADSG--VVCLCSFVSPFAED-R 235
+ RT L N RE +I +A+ F D G V + S +AE R
Sbjct: 303 GREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALR 362
Query: 236 EVARRI 241
E++ R+
Sbjct: 363 EISGRL 368
>At1g04300.1 68414.m00421 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471;contains Pfam PF00917: Meprin And
TRAF-Homology (MATH) domain
Length = 1052
Score = 29.5 bits (63), Expect = 5.1
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Query: 272 KARDGQIKGFTGITQEYERPEAPELIVSTVGRSIVESTMDVIRLLESQGIIPSLESNRSG 331
KA +GQ K ++ + + P IVS V + + DV+ LLE + P + G
Sbjct: 277 KALEGQTKNMKARSRLLDAKQLPAPIVS-VDKDMFVLVDDVLLLLERAALEPLPPKDEKG 335
Query: 332 VEELFIHGNRLTSAIEEAARLPQIELTTLDLQWVQV 367
+ GN +EA + LT L + V++
Sbjct: 336 RQNRTKDGNDGEEVNKEADERDERRLTELGRRTVEI 371
>At5g49760.1 68418.m06163 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 953
Score = 29.1 bits (62), Expect = 6.7
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 309 TMDVIRLLESQ--GIIPSLESNRSGVEELFIHGNRLTSAIEEAARLPQIELTTLDL 362
T+ V+RL ++ G IPS +N + + EL++ NR T + L L TLD+
Sbjct: 243 TLTVLRLDRNKLIGDIPSYLNNLTNLNELYLANNRFTGTLPNLTSL--TSLYTLDV 296
>At3g53830.1 68416.m05947 regulator of chromosome condensation
(RCC1) family protein / UVB-resistance protein-related
contains Pfam PF00415 : Regulator of chromosome
condensation (RCC1); similar to UVB-resistance protein
UVR8 (GIi;10177674) [Arabidopsis thaliana]
Length = 487
Score = 29.1 bits (62), Expect = 6.7
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 313 IRLLESQGIIPSLESNRSGVEELFI-HGNRLTSAIEEAARLP 353
I+++ S +IP LES SG E FI H T+ +A+R P
Sbjct: 267 IKMVSSPHLIPCLESIGSGKERSFILHQGGTTTTSAQASREP 308
>At5g07180.1 68418.m00818 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 932
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 317 ESQGIIPSLESNRSGVEELFIHGNRLTSAI 346
E G IP + N S +L++HGN+LT I
Sbjct: 264 ELTGPIPPILGNLSFTGKLYLHGNKLTGQI 293
>At3g49820.1 68416.m05447 hypothetical protein
Length = 161
Score = 28.7 bits (61), Expect = 8.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 428 LTRGGRPLAVLRGPEFYPHRKEERC 452
LTRGG+P +R HRK RC
Sbjct: 84 LTRGGQPTIAMRQSLSLDHRKNNRC 108
>At1g17240.1 68414.m02100 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
esculentum] gi|3894387|gb|AAC78593
Length = 729
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 320 GIIPSLESNRSGVEELFIHGNRLTSAIE 347
G+IPS N S +E+LF+ N+LT I+
Sbjct: 259 GVIPSEIYNLSELEQLFLPANQLTGKID 286
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.133 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,085,524
Number of Sequences: 28952
Number of extensions: 397963
Number of successful extensions: 1182
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1154
Number of HSP's gapped (non-prelim): 28
length of query: 475
length of database: 12,070,560
effective HSP length: 84
effective length of query: 391
effective length of database: 9,638,592
effective search space: 3768689472
effective search space used: 3768689472
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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