GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000233-TA|BGIBMGA000233-PA|IPR009832|Protein of unknown
function DUF1397
         (155 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    27   0.36 
DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted ...    26   0.47 
AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding pr...    24   1.9  
AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative odorant-b...    23   4.4  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 26.6 bits (56), Expect = 0.36
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)

Query: 33  NCFTTMLDASKPCFT--VKERDHLNTVYNVSRELA 65
           NC  ++L    P +   +KE+ H NTV  V R+LA
Sbjct: 817 NCAISVLRYGAPVWAHILKEKQHQNTVNKVHRKLA 851


>DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted
          polypeptide protein.
          Length = 125

 Score = 26.2 bits (55), Expect = 0.47
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 18 DEVFKKYCLQKTNFMNCFTTMLDASKPCF 46
          DEVFK  C      +NC+ T+LD +  C+
Sbjct: 58 DEVFK--CCGPCYQLNCYGTVLDCAGRCY 84


>AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding
           protein AgamOBP53 protein.
          Length = 171

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 25  CLQKTNFMNCFTTMLDASKPCFTVKE 50
           CL +T F NC  +   AS  C  V++
Sbjct: 141 CLHRTTFSNCPNSRWKASITCNKVRQ 166


>AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative
           odorant-binding protein OBPjj17 protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 9   EEAKPNGMIDEVFKKYCLQKTNFMNCFTTMLDASKPCFTVKE 50
           EE +   + +++F   C+Q   FM+C       S+ C T++E
Sbjct: 153 EEMEQCEIAEDIFGD-CVQAQMFMHCPRATWIESRSCQTMRE 193


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.133    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,424
Number of Sequences: 2123
Number of extensions: 6206
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 4
length of query: 155
length of database: 516,269
effective HSP length: 59
effective length of query: 96
effective length of database: 391,012
effective search space: 37537152
effective search space used: 37537152
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)