GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000233-TA|BGIBMGA000233-PA|IPR009832|Protein of unknown
function DUF1397
         (155 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060868-1|AAL28416.1|  301|Drosophila melanogaster GM03616p pro...   100   8e-22
AE014298-2365|AAF48590.1|  301|Drosophila melanogaster CG9917-PA...   100   8e-22
AY060737-1|AAL28285.1|  319|Drosophila melanogaster GH18858p pro...   100   2e-21
AL132651-2|CAB59576.1|  319|Drosophila melanogaster EG:103E12.2 ...   100   2e-21
AE014298-150|AAF45581.1|  319|Drosophila melanogaster CG14629-PA...   100   2e-21
AY122071-1|AAM52583.1|  312|Drosophila melanogaster AT15262p pro...    89   3e-18
AL121806-3|CAB58079.1|  312|Drosophila melanogaster EG:BACR42I17...    89   3e-18
AE014298-154|AAF45586.1|  312|Drosophila melanogaster CG11378-PA...    89   3e-18
X15469-1|CAA33496.1|  633|Drosophila melanogaster protein ( Dros...    29   2.1  
AY061364-1|AAL28912.1|  252|Drosophila melanogaster LD28680p pro...    28   4.9  
AE014134-1499|AAN10665.1|  333|Drosophila melanogaster CG31898-P...    28   4.9  
AY060610-1|AAL28158.1|  435|Drosophila melanogaster GH03577p pro...    28   6.5  
AE013599-2645|AAF57730.2|  435|Drosophila melanogaster CG5140-PA...    28   6.5  
AE013599-2200|AAF58056.2|  203|Drosophila melanogaster CG10731-P...    28   6.5  

>AY060868-1|AAL28416.1|  301|Drosophila melanogaster GM03616p
           protein.
          Length = 301

 Score =  100 bits (240), Expect = 8e-22
 Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 1/121 (0%)

Query: 4   LQQELEEAKPNGMIDEVFKKYCLQKTNFMNCFTTMLDASKPCFTVKERDHLNTVYNVSRE 63
           +QQE++EA P G +D VF KYC +++N + C         PC   +ER+  + +  + + 
Sbjct: 94  MQQEIQEASPKGELDVVFNKYCSRRSNAVECVDAFTAKLVPCLVQEEREGQDVIKQIIQS 153

Query: 64  LADFVCFKDGDRIALFISEGGAECFQEKQSDLQKCYNQTAGQNANF-DLNSLSPDNLPTL 122
           L +FVC KDGD+IALFI+E G EC + ++ ++Q+C N T  +  N  DL      ++P L
Sbjct: 154 LLNFVCHKDGDQIALFIAEKGPECIESQKDNIQQCVNSTFSEYLNVSDLQDNRIRSMPKL 213

Query: 123 S 123
           +
Sbjct: 214 T 214


>AE014298-2365|AAF48590.1|  301|Drosophila melanogaster CG9917-PA
           protein.
          Length = 301

 Score =  100 bits (240), Expect = 8e-22
 Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 1/121 (0%)

Query: 4   LQQELEEAKPNGMIDEVFKKYCLQKTNFMNCFTTMLDASKPCFTVKERDHLNTVYNVSRE 63
           +QQE++EA P G +D VF KYC +++N + C         PC   +ER+  + +  + + 
Sbjct: 94  MQQEIQEASPKGELDVVFNKYCSRRSNAVECVDAFTAKLVPCLVQEEREGQDVIKQIIQS 153

Query: 64  LADFVCFKDGDRIALFISEGGAECFQEKQSDLQKCYNQTAGQNANF-DLNSLSPDNLPTL 122
           L +FVC KDGD+IALFI+E G EC + ++ ++Q+C N T  +  N  DL      ++P L
Sbjct: 154 LLNFVCHKDGDQIALFIAEKGPECIESQKDNIQQCVNSTFSEYLNVSDLQDNRIRSMPKL 213

Query: 123 S 123
           +
Sbjct: 214 T 214


>AY060737-1|AAL28285.1|  319|Drosophila melanogaster GH18858p
           protein.
          Length = 319

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 4/123 (3%)

Query: 1   MEILQQELEEAKPNGMIDEVFKKYCLQKTNFMNCFTTMLDASKPCFTVKERDHLNTVYNV 60
           M  +Q E+EEA P G +D VF+KYCL+      C     DA  PC T  E+ H   +  +
Sbjct: 106 MTEIQAEIEEASPKGDLDVVFEKYCLRLPQAKTCLKNFNDAILPCLTTDEKTHNAVLQRI 165

Query: 61  SRELADFVCFKDGDRIALFISEGGAECFQEKQSDLQKCYNQTAGQNANFDLNSLSPD-NL 119
           + +L +F+C+K+GD+IALFI+E G EC Q+ +  +  C N +    A +   S+SP+ +L
Sbjct: 166 ADKLLEFICYKNGDQIALFIAEEGPECLQQSREGIANCLNSSF---AGYLPKSISPEWDL 222

Query: 120 PTL 122
           P L
Sbjct: 223 PQL 225


>AL132651-2|CAB59576.1|  319|Drosophila melanogaster EG:103E12.2
           protein.
          Length = 319

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 4/123 (3%)

Query: 1   MEILQQELEEAKPNGMIDEVFKKYCLQKTNFMNCFTTMLDASKPCFTVKERDHLNTVYNV 60
           M  +Q E+EEA P G +D VF+KYCL+      C     DA  PC T  E+ H   +  +
Sbjct: 106 MTEIQAEIEEASPKGDLDVVFEKYCLRLPQAKTCLKNFNDAILPCLTTDEKTHNAVLQRI 165

Query: 61  SRELADFVCFKDGDRIALFISEGGAECFQEKQSDLQKCYNQTAGQNANFDLNSLSPD-NL 119
           + +L +F+C+K+GD+IALFI+E G EC Q+ +  +  C N +    A +   S+SP+ +L
Sbjct: 166 ADKLLEFICYKNGDQIALFIAEEGPECLQQSREGIANCLNSSF---AGYLPKSISPEWDL 222

Query: 120 PTL 122
           P L
Sbjct: 223 PQL 225


>AE014298-150|AAF45581.1|  319|Drosophila melanogaster CG14629-PA
           protein.
          Length = 319

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 4/123 (3%)

Query: 1   MEILQQELEEAKPNGMIDEVFKKYCLQKTNFMNCFTTMLDASKPCFTVKERDHLNTVYNV 60
           M  +Q E+EEA P G +D VF+KYCL+      C     DA  PC T  E+ H   +  +
Sbjct: 106 MTEIQAEIEEASPKGDLDVVFEKYCLRLPQAKTCLKNFNDAILPCLTTDEKTHNAVLQRI 165

Query: 61  SRELADFVCFKDGDRIALFISEGGAECFQEKQSDLQKCYNQTAGQNANFDLNSLSPD-NL 119
           + +L +F+C+K+GD+IALFI+E G EC Q+ +  +  C N +    A +   S+SP+ +L
Sbjct: 166 ADKLLEFICYKNGDQIALFIAEEGPECLQQSREGIANCLNSSF---AGYLPKSISPEWDL 222

Query: 120 PTL 122
           P L
Sbjct: 223 PQL 225


>AY122071-1|AAM52583.1|  312|Drosophila melanogaster AT15262p
           protein.
          Length = 312

 Score = 88.6 bits (210), Expect = 3e-18
 Identities = 39/102 (38%), Positives = 58/102 (56%)

Query: 4   LQQELEEAKPNGMIDEVFKKYCLQKTNFMNCFTTMLDASKPCFTVKERDHLNTVYNVSRE 63
           LQ+E++ A+PNG +D VF KYCL+      C     D ++ C T +E+ H  TV  +   
Sbjct: 104 LQEEMDVARPNGDLDTVFSKYCLKAPEAEACVKEFNDKAQHCLTPEEKRHQETVTRIGAS 163

Query: 64  LADFVCFKDGDRIALFISEGGAECFQEKQSDLQKCYNQTAGQ 105
           +  F C + GD+IALFI+E G EC +  +  +  C NQ+  Q
Sbjct: 164 VLGFACSRGGDQIALFIAEQGPECLEANKEAISNCLNQSFHQ 205


>AL121806-3|CAB58079.1|  312|Drosophila melanogaster EG:BACR42I17.2
           protein.
          Length = 312

 Score = 88.6 bits (210), Expect = 3e-18
 Identities = 39/102 (38%), Positives = 58/102 (56%)

Query: 4   LQQELEEAKPNGMIDEVFKKYCLQKTNFMNCFTTMLDASKPCFTVKERDHLNTVYNVSRE 63
           LQ+E++ A+PNG +D VF KYCL+      C     D ++ C T +E+ H  TV  +   
Sbjct: 104 LQEEMDVARPNGDLDTVFSKYCLKAPEAEACVKEFNDKAQHCLTPEEKRHQETVTRIGAS 163

Query: 64  LADFVCFKDGDRIALFISEGGAECFQEKQSDLQKCYNQTAGQ 105
           +  F C + GD+IALFI+E G EC +  +  +  C NQ+  Q
Sbjct: 164 VLGFACSRGGDQIALFIAEQGPECLEANKEAISNCLNQSFHQ 205


>AE014298-154|AAF45586.1|  312|Drosophila melanogaster CG11378-PA
           protein.
          Length = 312

 Score = 88.6 bits (210), Expect = 3e-18
 Identities = 39/102 (38%), Positives = 58/102 (56%)

Query: 4   LQQELEEAKPNGMIDEVFKKYCLQKTNFMNCFTTMLDASKPCFTVKERDHLNTVYNVSRE 63
           LQ+E++ A+PNG +D VF KYCL+      C     D ++ C T +E+ H  TV  +   
Sbjct: 104 LQEEMDVARPNGDLDTVFSKYCLKAPEAEACVKEFNDKAQHCLTPEEKRHQETVTRIGAS 163

Query: 64  LADFVCFKDGDRIALFISEGGAECFQEKQSDLQKCYNQTAGQ 105
           +  F C + GD+IALFI+E G EC +  +  +  C NQ+  Q
Sbjct: 164 VLGFACSRGGDQIALFIAEQGPECLEANKEAISNCLNQSFHQ 205


>X15469-1|CAA33496.1|  633|Drosophila melanogaster protein (
           Drosophila melanogasterDNA for complete foldback (FB)
           transposable n.  ).
          Length = 633

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 96  QKCYNQTAGQNANFDLNSLSPDNLPTLSFDKAEENAP 132
           ++C  Q    +AN  LNS  PD+ P     +A +N P
Sbjct: 69  ERCGIQQLDTSANLTLNSTFPDDDPEFQITEASKNGP 105


>AY061364-1|AAL28912.1|  252|Drosophila melanogaster LD28680p
           protein.
          Length = 252

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)

Query: 80  ISEGGAECFQEKQSDLQKCYNQTA---GQNANFDLNSLSPDNLPTLSF 124
           +S  G E     QS  +   NQTA   G + N D +  +P  LPT SF
Sbjct: 123 VSYEGRETSSLFQSSWKSLINQTASCNGSSENIDSDPPTPQRLPTSSF 170


>AE014134-1499|AAN10665.1|  333|Drosophila melanogaster CG31898-PA
           protein.
          Length = 333

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)

Query: 80  ISEGGAECFQEKQSDLQKCYNQTA---GQNANFDLNSLSPDNLPTLSF 124
           +S  G E     QS  +   NQTA   G + N D +  +P  LPT SF
Sbjct: 123 VSYEGRETSSLFQSSWKSLINQTASCNGSSENIDSDPPTPQRLPTSSF 170


>AY060610-1|AAL28158.1|  435|Drosophila melanogaster GH03577p
          protein.
          Length = 435

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 15 GMIDEVFKKYCLQKTNFMNCFTTMLDASKPCFTVKERDHLNTVYNVSRELAD 66
          G  DEVF   C    +  NC    LD SK C   + +     ++ V   LA+
Sbjct: 14 GQADEVFATVCGHMFHH-NCLNQWLDRSKTCPQCRNKCTTRNIFRVYFNLAN 64


>AE013599-2645|AAF57730.2|  435|Drosophila melanogaster CG5140-PA
          protein.
          Length = 435

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 15 GMIDEVFKKYCLQKTNFMNCFTTMLDASKPCFTVKERDHLNTVYNVSRELAD 66
          G  DEVF   C    +  NC    LD SK C   + +     ++ V   LA+
Sbjct: 14 GQADEVFATVCGHMFHH-NCLNQWLDRSKTCPQCRNKCTTRNIFRVYFNLAN 64


>AE013599-2200|AAF58056.2|  203|Drosophila melanogaster CG10731-PA,
           isoform A protein.
          Length = 203

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/39 (35%), Positives = 17/39 (43%)

Query: 80  ISEGGAECFQEKQSDLQKCYNQTAGQNANFDLNSLSPDN 118
           I  GG   F E  S L K YN   G+N  F +  +   N
Sbjct: 54  IKNGGGVRFVESPSRLWKDYNSLPGENTQFCIKVVDASN 92


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.319    0.133    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,647,051
Number of Sequences: 52641
Number of extensions: 303110
Number of successful extensions: 525
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 514
Number of HSP's gapped (non-prelim): 15
length of query: 155
length of database: 24,830,863
effective HSP length: 79
effective length of query: 76
effective length of database: 20,672,224
effective search space: 1571089024
effective search space used: 1571089024
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 58 (27.5 bits)