GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000232-TA|BGIBMGA000232-PA|IPR002048|Calcium-binding
EF-hand, IPR003299|Flagellar calcium-binding protein (calflagin)
         (208 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    29   0.035
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.4  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 28.7 bits (61), Expect = 0.035
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 6/69 (8%)

Query: 106 PPMSESRRNIVEQAFKKLDKTGDGAITIDDIKGVYSVDSQ-----TRYKSGEETEDVIMK 160
           P +SE+  N+  + +K++  T   A T   IK +YS+ S+       +  G E +DV +K
Sbjct: 70  PLLSEALTNLPGEKWKEMRATLSPAFTSSKIKNMYSLISECAENFVDFFQGRE-QDVEIK 128

Query: 161 RFLANFESD 169
              + F +D
Sbjct: 129 EVFSRFSND 137


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query: 96  SLDEFLIKIRPPMSESRRNIVEQAFKKLDKTGDGAITIDDIKGVYS 141
           +L +F+I     +  +   I+E  F KL+    G   +D +  +YS
Sbjct: 174 TLAKFMIFTSTCIYTNLLRIIEADFSKLNHLLSGTENLDLVLPIYS 219


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.134    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,286
Number of Sequences: 317
Number of extensions: 1713
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 208
length of database: 114,650
effective HSP length: 54
effective length of query: 154
effective length of database: 97,532
effective search space: 15019928
effective search space used: 15019928
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 41 (20.6 bits)