Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000232-TA|BGIBMGA000232-PA|IPR002048|Calcium-binding
EF-hand, IPR003299|Flagellar calcium-binding protein (calflagin)
(208 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 53 3e-08
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 44 1e-05
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 41 2e-04
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 39 6e-04
SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr ... 32 0.070
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 31 0.16
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo... 30 0.28
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 29 0.49
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 29 0.49
SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharo... 29 0.65
SPCC794.12c |mae2||malic enzyme|Schizosaccharomyces pombe|chr 3|... 29 0.65
SPBC651.05c |dot2||EAP30 family protein Dot2|Schizosaccharomyces... 28 1.1
SPAC17G8.05 |med20||mediator complex subunit Med20|Schizosacchar... 28 1.1
SPBC1709.03 |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.1
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 27 1.5
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 27 1.5
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 27 2.0
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 3.5
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 26 3.5
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 26 4.6
SPAC2C4.17c |||MS ion channel protein 2|Schizosaccharomyces pomb... 25 6.1
SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog Taz1|Schizosacc... 25 6.1
SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr 2... 25 6.1
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 25 8.1
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 25 8.1
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 53.2 bits (122), Expect = 3e-08
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 52 DDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPPMSES 111
D DG+ + E ++ G +E +++ ++ D D +G+I EFL + M ++
Sbjct: 24 DQDGN--ITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLTMMARKMKDT 81
Query: 112 -RRNIVEQAFKKLDKTGDGAITIDDIKGVYSVDSQTRYKSGEETEDVIMKRFLANFESDG 170
V +AFK DK G+G IT++++ V + S S EE D+I E+D
Sbjct: 82 DNEEEVREAFKVFDKDGNGYITVEELTHV--LTSLGERLSQEEVADMIR-------EADT 132
Query: 171 TVDGKVTLEEFMNYYS 186
DG + EEF S
Sbjct: 133 DGDGVINYEEFSRVIS 148
Score = 37.1 bits (82), Expect = 0.002
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Query: 78 SEAEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKKLDKTGDGAITIDDIK 137
+E E FS FD D G+I+ +E + +R ++ ++D G+G I +
Sbjct: 12 AEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEF- 70
Query: 138 GVYSVDSQTRYKSGEETEDVIMKRFLANFESDGTVDGKVTLEEFMNYYSGISVSIDNDCY 197
+ R + E+ + + F F+ DG +G +T+EE + + + + +
Sbjct: 71 ----LTMMARKMKDTDNEEEVREAFKV-FDKDG--NGYITVEELTHVLTSLGERLSQEEV 123
Query: 198 FDLMMRQA 205
D M+R+A
Sbjct: 124 AD-MIREA 130
Score = 37.1 bits (82), Expect = 0.002
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 48 FRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEF 100
F+ D DG+ + EE + + G L++ E ++ + DTD G I+ +EF
Sbjct: 91 FKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEF 143
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 44.4 bits (100), Expect = 1e-05
Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 7/144 (4%)
Query: 9 EELMQKSARAMTQATDPLEKLRLLCLSRGASGILGLGRIFRRMDDDGSKLLNKEEFLYGI 68
E + ++ + + +++ L + AS L R+F +D+DG ++ +EF+ +
Sbjct: 24 ERIRKRFIKIDANQSGSIDRNEFLSIPSVASNPLA-SRLFSVVDEDGGGDVDFQEFINSL 82
Query: 69 KETGLELNKSEAEEL-FSQFDTDSSGSISLDEFLIKIRPPMSESRRN-----IVEQAFKK 122
+ NK E + F +D D G IS E + ++ + + R IV++ +
Sbjct: 83 SVFSVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDKTIME 142
Query: 123 LDKTGDGAITIDDIKGVYSVDSQT 146
+DK DG I+ ++ K + S + T
Sbjct: 143 VDKDRDGKISFEEFKDIVSGSNVT 166
Score = 42.3 bits (95), Expect = 5e-05
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 48 FRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRP- 106
F ++D + S +++ EFL I + A LFS D D G + EF+ +
Sbjct: 30 FIKIDANQSGSIDRNEFL-SIPSVA---SNPLASRLFSVVDEDGGGDVDFQEFINSLSVF 85
Query: 107 PMSESRRNIVEQAFKKLDKTGDGAITIDDIKGVYSVDSQTRYKSGEETEDVIMKRFLANF 166
+ ++ ++ AFK D DG I+ ++ V + T + ++ + ++ K +
Sbjct: 86 SVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLRE-DQLQQIVDKTIM--- 141
Query: 167 ESDGTVDGKVTLEEFMNYYSGISVS 191
E D DGK++ EEF + SG +V+
Sbjct: 142 EVDKDRDGKISFEEFKDIVSGSNVT 166
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 40.7 bits (91), Expect = 2e-04
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 59 LNKEEFLYGIKETGLELNKSE-AEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVE 117
LNK EF K+ + S AE +F+ FD D +G I EF+ + + +
Sbjct: 43 LNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLI 102
Query: 118 QAFKKLDKTGDGAITIDD----IKGVYS-VDSQTRYKSGEETEDVIMKRFLANFESDGTV 172
AF+ D +G I+ D+ + +Y V S + E+T + + + + N D
Sbjct: 103 WAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNK-IFNM-MDKNK 160
Query: 173 DGKVTLEEF 181
DG++TLEEF
Sbjct: 161 DGQLTLEEF 169
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 38.7 bits (86), Expect = 6e-04
Identities = 26/140 (18%), Positives = 60/140 (42%), Gaps = 10/140 (7%)
Query: 44 LGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFL-I 102
+ F+ D D ++ E ++ G KSE ++ FD G + +++F+ +
Sbjct: 39 INEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQMEDFVRV 98
Query: 103 KIRPPMSESRRNIVEQAFKKLDKTGDGAITIDDIKGVYSVDSQTRYKSGEETEDVIMKRF 162
+ +++AF+ D G I++ +++ V + E +D ++
Sbjct: 99 MTEKIVERDPLEEIKRAFELFDDDETGKISLRNLRRVAK-------ELNENIDDQELEAM 151
Query: 163 LANFESDGTVDGKVTLEEFM 182
+ F+ D DG++ +EF+
Sbjct: 152 IEEFDLD--QDGEINEQEFI 169
Score = 37.1 bits (82), Expect = 0.002
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 74 ELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKKLDKTGDGAITI 133
E + + E F FD+D +I E +R + ++ V + + DKTG G + +
Sbjct: 33 EEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQM 92
Query: 134 DDIKGVYSVDSQTRYKSGEETEDVIMKRFLANFESDGTVDGKVTLEEFMNYYSGISVSID 193
+D V + R + E++ KR F+ D T GK++L ++ +ID
Sbjct: 93 EDFVRVMTEKIVER----DPLEEI--KRAFELFDDDET--GKISLRNLRRVAKELNENID 144
Query: 194 N 194
+
Sbjct: 145 D 145
>SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 621
Score = 31.9 bits (69), Expect = 0.070
Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Query: 43 GLGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLI 102
G+ ++FR + S +LN+ EF + GL + E LF + G ++ + F
Sbjct: 488 GITKVFRHFEKKKSNMLNEVEFYAALASLGLVYDTEEGTALFHRAANSEEG-VTYERFTE 546
Query: 103 KIRPPMSESRRNIVEQAFKKLDKTGDGA--ITIDDI 136
+ + + R+ Q DG +T DD+
Sbjct: 547 IVMEELED--RDSARQVLYAFCDVADGKSYVTSDDL 580
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 30.7 bits (66), Expect = 0.16
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 46 RIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKI 104
+ FR D D S + +F +K G +L+ +E + + + D +SGS +F+ +I
Sbjct: 82 KAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEADPTNSGSFDYYDFVQRI 140
Score = 25.0 bits (52), Expect = 8.1
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 74 ELNKSEAEE----LFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKKLDKTGDG 129
+L ++E+EE F FD D+SG I +F ++ + N V+ ++ D T G
Sbjct: 70 KLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEADPTNSG 129
Query: 130 AITIDD 135
+ D
Sbjct: 130 SFDYYD 135
>SPBC215.01 ||SPBC3B9.20|GTPase activating
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 29.9 bits (64), Expect = 0.28
Identities = 18/74 (24%), Positives = 31/74 (41%)
Query: 63 EFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKK 122
E+ G+ + + S LF +FD +GS+SL + + I + F+
Sbjct: 564 EWAKGLDAAAINNSSSFLRHLFLRFDKSMTGSLSLQDLVSGIAELKFRDVMRNISFIFEL 623
Query: 123 LDKTGDGAITIDDI 136
D GDG + D+
Sbjct: 624 YDFNGDGFMDKPDV 637
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 29.1 bits (62), Expect = 0.49
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 52 DDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPPMSES 111
++ SKL N ++ + + + ++++AE + S D DS IS+ + ES
Sbjct: 219 ENSDSKLDNLRNYIVSLNQKRKK-DEADAESVLSSDDNDSIEEISIKKVKYDPHETNKES 277
Query: 112 RRNIVEQAFKKLDKT 126
N++ + K +D T
Sbjct: 278 EYNLIGSSEKTIDIT 292
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 29.1 bits (62), Expect = 0.49
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 73 LELNKSEA--EELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKKLDKTGDGA 130
L LN S EE F + D D SG +S +EF + + ++R IV+ FK+ +G
Sbjct: 326 LHLNASMEFLEETFQKADADHSGKLSFEEFQHFV--SLLKTRSEIVD-IFKEY-TSGSDK 381
Query: 131 ITIDDIKGVYSVDSQTRYKSGEETEDVIMKRFLANFESDGTVDGKVTLEEFMNY 184
++++ + S + R S D I +++ +D D K+ L EF ++
Sbjct: 382 MSLEQFRHFLSTSQKARLDS-----DSIRTLYVSFCSND---DSKMGLIEFTSF 427
>SPCC63.04 |mok14||alpha-1,3-glucan synthase
Mok14|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1369
Score = 28.7 bits (61), Expect = 0.65
Identities = 37/150 (24%), Positives = 61/150 (40%), Gaps = 16/150 (10%)
Query: 24 DPLEKLRLLCLSRGASGILGLGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEEL 83
D E+ + S +S + L I + GS+L E F I G+ + AE
Sbjct: 793 DNYEQAESIISSLSSSALSELSYISESSMNIGSRL--DERF---IDANGVAIRDFSAELT 847
Query: 84 FSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKK--------LDKTGDGAITIDD 135
+ + +S G +S+D FL K++ + + + F+K DK DD
Sbjct: 848 YLTPE-NSKGKLSIDHFLNKVQSRWHDEEHHYYKTGFRKRVYKYLKIKDKKSKDVDPDDD 906
Query: 136 IKGVYSVDSQT--RYKSGEETEDVIMKRFL 163
+ +++ T RYKS T I +R L
Sbjct: 907 LVNQLPLNAYTKPRYKSAASTRLNIYQRIL 936
>SPCC794.12c |mae2||malic enzyme|Schizosaccharomyces pombe|chr
3|||Manual
Length = 565
Score = 28.7 bits (61), Expect = 0.65
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 13/121 (10%)
Query: 18 AMTQATDPLEKLRLLCLSRGASGILGLGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNK 77
A+ PL + R++ G +G+ +I M DG L L+ I GL L +
Sbjct: 287 ALHVTKSPLTEQRIMIFGAGTAGVGIANQIVAGMVTDGLSLDKARGNLFMIDRCGLLLER 346
Query: 78 -----SEAEELFSQFDTD----SSGSISLDEFLIKIRPPM----SESRRNIVEQAFKKLD 124
++ ++ F + D+D SG I+L+ + ++P + S E+A +++
Sbjct: 347 HAKIATDGQKPFLKKDSDFKEVPSGDINLESAIALVKPTILLGCSGQPGKFTEKAIREMS 406
Query: 125 K 125
K
Sbjct: 407 K 407
>SPBC651.05c |dot2||EAP30 family protein Dot2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 252
Score = 27.9 bits (59), Expect = 1.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 55 GSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDT 89
G LN +E+L +E G EL + +++E+ SQ T
Sbjct: 6 GIGALNDDEYLKQYEEVGNELIEQQSDEIASQLST 40
>SPAC17G8.05 |med20||mediator complex subunit
Med20|Schizosaccharomyces pombe|chr 1|||Manual
Length = 180
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 142 VDSQTRYKSGEETEDVIMKRFLANFESDGTVDGKV 176
VD T + E ED+I++ L NF T++G +
Sbjct: 55 VDEATMIDAEPELEDIIVRTKLWNFRQSFTIEGSI 89
>SPBC1709.03 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 398
Score = 27.9 bits (59), Expect = 1.1
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 129 GAITIDDIKGVYSVDSQTRYKSGEETEDV 157
G I+I D GVYS + T YKS E+ E +
Sbjct: 126 GVISIHDSTGVYSQITTTPYKSLEDYEQL 154
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 27.5 bits (58), Expect = 1.5
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 64 FLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKKL 123
F+ +E+ LE E FSQ +S + SL+ I P SRR IVEQ ++
Sbjct: 680 FILPNEESLLEKYWINYNESFSQLSRESLFT-SLESPFTDIESPTIVSRRKIVEQRKLRM 738
Query: 124 DKTGDGAITID 134
+K +D
Sbjct: 739 EKESFQETNVD 749
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 27.5 bits (58), Expect = 1.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 108 MSESRRNIVEQAFKKLDKTGDGAITIDDIK 137
++ S+ +++AF LDK GDG I +D+K
Sbjct: 42 LTSSQIQELKEAFALLDKDGDGNIGREDVK 71
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 27.1 bits (57), Expect = 2.0
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 135 DIKGVYSVDSQTRYKSGEETEDVIMKRFLANFESDG 170
D+ G+ S DS +++ G +DV+ + F NFE+ G
Sbjct: 70 DMYGMNS-DSNSQFDGGVNLDDVLAQMFGMNFEAGG 104
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with
EF hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.2 bits (55), Expect = 3.5
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Query: 74 ELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKK---LDKTGDGA 130
+L ++E E +++ D GS+ DEF + + + N V T +
Sbjct: 853 KLTRTELEHIWNLCDHGDKGSLDRDEFAVALHLIYRKLNGNEVPAVLPPELIPPSTRNFT 912
Query: 131 ITIDDIKGVYSVDSQTRYKSGEETEDVIMKRFLANFESDGT 171
+++ +K + D+ R G E + + K + S+ T
Sbjct: 913 ESLNQVKNLIKNDTSNRKPFGAENQSKLKKNSFYDNPSETT 953
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 26.2 bits (55), Expect = 3.5
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 59 LNKEE-FLYGIKETGL----ELNKSEAEELFSQFDTDSSGSISLDEFLIKIR 105
LN E +L G K G+ +L+ + E+++ D D G DEF I ++
Sbjct: 16 LNPENGYLSGSKAAGVLRSSKLSSDKLEKIWDLADIDDDGMFDFDEFAIAMK 67
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 25.8 bits (54), Expect = 4.6
Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 58 LLNKEEFLYGIKETGLELNKSEAEELFSQFDTDS 91
LLNKE+ L E L KSEAE S D DS
Sbjct: 445 LLNKEKKLKKSIEA-LSFEKSEAENSLSSHDIDS 477
>SPAC2C4.17c |||MS ion channel protein 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 840
Score = 25.4 bits (53), Expect = 6.1
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 79 EAEELFSQFDTDSSGSISLDEF-----LIKIRPPMSESRRNIVEQAFKKLDKTGDGAITI 133
E ++F D D S +++LDE I I S V+ A KLD+ G G + I
Sbjct: 396 EINDIFHILDNDYSRTVTLDEMEQFTREISIEFRSISSSLRDVDLALGKLDRVGLGVVGI 455
>SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog
Taz1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 25.4 bits (53), Expect = 6.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 81 EELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIV 116
E + F TDS+ SI EF++ P S N+V
Sbjct: 273 ELVIRYFGTDSNPSIDASEFILSCLPYTSLDALNVV 308
>SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 497
Score = 25.4 bits (53), Expect = 6.1
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 5 SVQEEELMQKSARAMTQATDPLEKLRLLCLSRGASGILGLGRIFRRMDDDGSKLLNKEEF 64
S Q E + R M L +L + ++ ILGL R D+G K+ NK+
Sbjct: 182 SYQNLESINSWLRLMASLYKDLSELVPVGITAEGRTILGLKLNGRHPSDNGEKIRNKKVI 241
Query: 65 L-----YGIKETGLELNKSEAEELFSQFDTDSSGSISLDEF 100
+ + + G+ A +L +++D+D LD+F
Sbjct: 242 IIQGGSHAREWIGIPSVCYAAWQLLAKYDSDGHVRKLLDKF 282
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 25.0 bits (52), Expect = 8.1
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 47 IFRRMDDDGSKLLNKEEFLYGIKETGL-ELNKSEAE 81
IFRR+ D S + ++ FL+ G+ E+ +EAE
Sbjct: 377 IFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAE 412
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 25.0 bits (52), Expect = 8.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 158 IMKRFLANFESDGTVDGKVTL 178
+ R+L F+SDG+V KV L
Sbjct: 572 VSSRYLPEFQSDGSVSEKVRL 592
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.134 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 918,579
Number of Sequences: 5004
Number of extensions: 37797
Number of successful extensions: 134
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 104
Number of HSP's gapped (non-prelim): 32
length of query: 208
length of database: 2,362,478
effective HSP length: 70
effective length of query: 138
effective length of database: 2,012,198
effective search space: 277683324
effective search space used: 277683324
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 52 (25.0 bits)
- SilkBase 1999-2023 -