Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000231-TA|BGIBMGA000231-PA|IPR002379|ATPase, F0/V0
complex, subunit C, IPR000245|ATPase, V0 complex, proteolipid subunit
C,
(205 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g32530.1 68417.m04631 vacuolar ATP synthase, putative / V-ATP... 153 6e-38
At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C su... 152 1e-37
At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipi... 81 7e-16
At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipi... 79 2e-15
At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipi... 79 2e-15
At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipi... 79 2e-15
At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipi... 79 2e-15
At1g47670.1 68414.m05296 amino acid transporter family protein s... 35 0.045
At3g02690.1 68416.m00260 integral membrane family protein simila... 28 5.1
At2g24610.1 68415.m02940 cyclic nucleotide-regulated ion channel... 27 6.8
At3g23010.1 68416.m02901 disease resistance family protein / LRR... 27 9.0
>At4g32530.1 68417.m04631 vacuolar ATP synthase, putative /
V-ATPase, putative SP|P23968 Vacuolar ATP synthase 22
kDa proteolipid subunit (EC 3.6.3.14) {Saccharomyces
cerevisiae}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 180
Score = 153 bits (372), Expect = 6e-38
Identities = 81/170 (47%), Positives = 107/170 (62%), Gaps = 3/170 (1%)
Query: 30 GEQISLGWFLENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNL 89
G S G L SPY + +GIA S+ +SV+GAA GI+ TG S++G ++APRI +KNL
Sbjct: 8 GHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNL 67
Query: 90 ISVIFCEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLF 149
ISVIFCEAVAIYG+I AI+L LE S P +S ++ AGY +F +G+ VG NL
Sbjct: 68 ISVIFCEAVAIYGVIVAIILQTKLE--SVP-SSKMYDAESLRAGYAIFASGIIVGFANLV 124
Query: 150 CXXXXXXXXXXXXXXXXXXXXXFVKILIVEIFGSAIGLFGLIVGIYMTSK 199
C FVKIL++EIFGSA+GLFG+IVGI M+++
Sbjct: 125 CGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQ 174
>At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C
subunit family protein similar to SP|P23968 Vacuolar ATP
synthase 22 kDa proteolipid subunit (EC 3.6.3.14)
{Saccharomyces cerevisiae}; contains Pfam profile
PF00137: ATP synthase subunit C
Length = 178
Score = 152 bits (369), Expect = 1e-37
Identities = 80/166 (48%), Positives = 106/166 (63%), Gaps = 3/166 (1%)
Query: 34 SLGWFLENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVI 93
S G L SPY + +GIA S+ +SV+GAA GI+ TG S++G ++APRI +KNLISVI
Sbjct: 10 SWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISVI 69
Query: 94 FCEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCXXX 153
FCEAVAIYG+I AI+L LE S P +S ++ AGY +F +G+ VG NL C
Sbjct: 70 FCEAVAIYGVIVAIILQTKLE--SVP-SSKMYDAESLRAGYAIFASGIIVGFANLVCGLC 126
Query: 154 XXXXXXXXXXXXXXXXXXFVKILIVEIFGSAIGLFGLIVGIYMTSK 199
FVKIL++EIFGSA+GLFG+IVGI M+++
Sbjct: 127 VGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQ 172
>At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipid
subunit 4 / V-ATPase 16 kDa proteolipid subunit 4
(AVAP4) (AVA-P4) identical to SP|P59229 Vacuolar ATP
synthase 16 kDa proteolipid subunit 4 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 4) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 166
Score = 80.6 bits (190), Expect = 7e-16
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 13/168 (7%)
Query: 34 SLGWFLENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVI 93
S G+ + T+P+ +G LG A ++ S +GAA G +GV + GV P + K+++ V+
Sbjct: 3 SSGFSGDETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 61
Query: 94 FCEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQNW--MAGYVMFGAGLAVGLVNLFCX 151
+ IYGLI A+++S T ++ K +++ GY +GLA GL L
Sbjct: 62 MAGVLGIYGLIIAVIIS----------TGINPKAKSYYLFDGYAHLSSGLACGLAGLSAG 111
Query: 152 XXXXXXXXXXXXXXXXXXXXFVKILIVEIFGSAIGLFGLIVGIYMTSK 199
FV ++++ IF A+ L+GLIVGI ++S+
Sbjct: 112 MAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 159
>At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipid
subunit 3 / V-ATPase 16 kDa proteolipid subunit 3
(AVAP3) (AVA-P3) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 79.4 bits (187), Expect = 2e-15
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 40 ENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVA 99
+ T+P+ +G LG A ++ S +GAA G +GV + GV P + K+++ V+ +
Sbjct: 7 DETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLG 65
Query: 100 IYGLITAIVLSGMLEKYSEPFTSVSVKQQNW--MAGYVMFGAGLAVGLVNLFCXXXXXXX 157
IYGLI A+++S T ++ K +++ GY +GLA GL L
Sbjct: 66 IYGLIIAVIIS----------TGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIV 115
Query: 158 XXXXXXXXXXXXXXFVKILIVEIFGSAIGLFGLIVGIYMTSK 199
FV ++++ IF A+ L+GLIVGI ++S+
Sbjct: 116 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 157
>At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipid
subunit 1 / V-ATPase 16 kDa proteolipid subunit 1
(AVAP1) (AVA-P1) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 79.4 bits (187), Expect = 2e-15
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 40 ENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVA 99
+ T+P+ +G LG A ++ S +GAA G +GV + GV P + K+++ V+ +
Sbjct: 7 DETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLG 65
Query: 100 IYGLITAIVLSGMLEKYSEPFTSVSVKQQNW--MAGYVMFGAGLAVGLVNLFCXXXXXXX 157
IYGLI A+++S T ++ K +++ GY +GLA GL L
Sbjct: 66 IYGLIIAVIIS----------TGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIV 115
Query: 158 XXXXXXXXXXXXXXFVKILIVEIFGSAIGLFGLIVGIYMTSK 199
FV ++++ IF A+ L+GLIVGI ++S+
Sbjct: 116 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 157
>At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipid
subunit 5 / V-ATPase 16 kDa proteolipid subunit 5
(AVAP5) identical to SP|P59227 Vacuolar ATP synthase 16
kDa proteolipid subunit 1/3/5 (EC 3.6.3.14) (V-ATPase 16
kDa proteolipid subunit 1/3/5) {Arabidopsis thaliana}
GI:926929; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 79.4 bits (187), Expect = 2e-15
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 40 ENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVA 99
+ T+P+ +G LG A ++ S +GAA G +GV + GV P + K+++ V+ +
Sbjct: 7 DETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLG 65
Query: 100 IYGLITAIVLSGMLEKYSEPFTSVSVKQQNW--MAGYVMFGAGLAVGLVNLFCXXXXXXX 157
IYGLI A+++S T ++ K +++ GY +GLA GL L
Sbjct: 66 IYGLIIAVIIS----------TGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIV 115
Query: 158 XXXXXXXXXXXXXXFVKILIVEIFGSAIGLFGLIVGIYMTSK 199
FV ++++ IF A+ L+GLIVGI ++S+
Sbjct: 116 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 157
>At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipid
subunit 2 / V-ATPase 16 kDa proteolipid subunit 2
(AVAP2) (AVA-P2) identical to SP|Q39039 Vacuolar ATP
synthase 16 kDa proteolipid subunit 2 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 2 {Arabidopsis
thaliana}, nearly identical to vacuolar H+-ATPase
proteolipid (16 kDa) subunit GI:755147 from [Gossypium
hirsutum]
Length = 165
Score = 79.4 bits (187), Expect = 2e-15
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 40 ENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVA 99
+ T+P+ +G LG A ++ S +GAA G +GV + GV P + K+++ V+ +
Sbjct: 8 DETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLG 66
Query: 100 IYGLITAIVLSGMLEKYSEPFTSVSVKQQNW--MAGYVMFGAGLAVGLVNLFCXXXXXXX 157
IYGLI A+++S T ++ K +++ GY +GLA GL L
Sbjct: 67 IYGLIIAVIIS----------TGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIV 116
Query: 158 XXXXXXXXXXXXXXFVKILIVEIFGSAIGLFGLIVGIYMTSK 199
FV ++++ IF A+ L+GLIVGI ++S+
Sbjct: 117 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 158
>At1g47670.1 68414.m05296 amino acid transporter family protein
similar to lysine and histidine specific transporter
GI:2576361 from [Arabidopsis thaliana]; contains Pfam
profile PF01490: Transmembrane amino acid transporter
protein
Length = 519
Score = 34.7 bits (76), Expect = 0.045
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 4 FLSYLFVLLVGLAIPIFSLY----YVLNGKGEQISLGWFLENTSPYMWGTLGIAFSVALS 59
FLS L LL GL +P+ Y +VL K + S W+ + G LG+AFS+A S
Sbjct: 443 FLSSLAGLLGGLTLPVTFAYPCFMWVLIKKPAKYSFNWYFH----WGLGWLGVAFSLAFS 498
Query: 60 VVGAAMGIHTTGVSI 74
+G + T G+ +
Sbjct: 499 -IGGIWSMVTNGLKL 512
>At3g02690.1 68416.m00260 integral membrane family protein similar
to PecM protein (GI:5852331) {Vogesella indigofera} and
PecM protein (SP:P42194) [Erwinia chrysanthemi]
Length = 417
Score = 27.9 bits (59), Expect = 5.1
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 25 VLNGKGEQISLGWFLENTSPYMWGTLGIAFSVALSVVG----AAMGIHTTGVSIVGGGVK 80
+L+G GE L W + + + WGT +A L + G AA + G+ +V V
Sbjct: 114 ILSG-GEGTFLEWTVLISPFFFWGTAMVAMKEVLPITGPFFVAAFRLIPAGLLLVAFAVY 172
Query: 81 APRIKTKNLISVIFCEAVAIYGLITAIVLSGM----LEKYSEPFTSVSVKQQN-WMAGYV 135
R + I+ F ++A++ L+ A G L++ S SV + Q +A
Sbjct: 173 KGRPLPEG-INAWF--SIALFALVDATCFQGFLAQGLQRTSAGLGSVIIDSQPLTVAVLA 229
Query: 136 MFGAGLAVGLV 146
F G ++G+V
Sbjct: 230 SFLFGESIGIV 240
>At2g24610.1 68415.m02940 cyclic nucleotide-regulated ion channel,
putative (CNGC14) similar to cyclic nucleotide and
calmodulin-regulated ion channel (GI:4581205)
[Arabidopsis thaliana]
Length = 726
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/43 (27%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 88 NLISVIFCEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQNW 130
+++ +F VAI+GL+ +L G ++ Y + S++V+ + W
Sbjct: 373 SVLETMFAILVAIFGLVLFALLIGNMQTYLQ---SITVRLEEW 412
>At3g23010.1 68416.m02901 disease resistance family protein / LRR
family protein contains leucine rich-repeat domains
Pfam:PF00560, INTERPRO:IPR001611; contains similarity to
Cf-2.2 [Lycopersicon pimpinellifolium]
gi|1184077|gb|AAC15780
Length = 595
Score = 27.1 bits (57), Expect = 9.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 118 EPFTSVSVKQQNWMAGYVMFGAGLAVGLV 146
EP + + NW+A + FG G+ GLV
Sbjct: 560 EPLSESEDQLLNWIAAAIAFGPGMFCGLV 588
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.327 0.143 0.429
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,932,478
Number of Sequences: 28952
Number of extensions: 136997
Number of successful extensions: 530
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 502
Number of HSP's gapped (non-prelim): 16
length of query: 205
length of database: 12,070,560
effective HSP length: 78
effective length of query: 127
effective length of database: 9,812,304
effective search space: 1246162608
effective search space used: 1246162608
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 57 (27.1 bits)
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