Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000231-TA|BGIBMGA000231-PA|IPR002379|ATPase, F0/V0
complex, subunit C, IPR000245|ATPase, V0 complex, proteolipid subunit
C,
(205 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 200 8e-52
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 200 8e-52
Z29095-8|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 69 2e-12
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 69 2e-12
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 66 2e-11
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 66 2e-11
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 66 2e-11
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 66 2e-11
AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine r... 31 0.58
AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin reu... 28 4.1
AF036705-2|AAM98021.1| 237|Caenorhabditis elegans Hypothetical ... 28 4.1
AF036705-1|AAB95170.1| 249|Caenorhabditis elegans Hypothetical ... 28 4.1
AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of... 28 4.1
Z83238-1|CAB05792.1| 339|Caenorhabditis elegans Hypothetical pr... 27 7.2
AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical ... 27 7.2
AL132948-17|CAD31817.1| 319|Caenorhabditis elegans Hypothetical... 27 9.5
AL110479-3|CAB60312.2| 330|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 200 bits (487), Expect = 8e-52
Identities = 97/189 (51%), Positives = 128/189 (67%), Gaps = 5/189 (2%)
Query: 22 LYYVLNGKGEQISLGWFLENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKA 81
L+Y+L+G+G + +GWFL +TSP+MW LGI FS++LSV+GA GI TTG SI+GGGVKA
Sbjct: 26 LFYMLSGQGHRFDIGWFLTSTSPHMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKA 85
Query: 82 PRIKTKNLISVIFCEAVAIYGLITAIVLSGMLEKYSE---PFT--SVSVKQQNWMAGYVM 136
PRI+TKNL+S+IFCEAVAI+G+I A V G L ++ P T +++ +N +GY++
Sbjct: 86 PRIRTKNLVSIIFCEAVAIFGIIMAFVFVGKLAEFRREDLPDTEDGMAILARNLASGYMI 145
Query: 137 FGAGLAVGLVNLFCXXXXXXXXXXXXXXXXXXXXXFVKILIVEIFGSAIGLFGLIVGIYM 196
FG GL VGL NL C FVKILI+EIF SAIGLFG+I+GI
Sbjct: 146 FGGGLTVGLSNLVCGLAVGIVGSGAAIADAANPALFVKILIIEIFASAIGLFGMIIGIVQ 205
Query: 197 TSKVKMGNQ 205
T+K GN+
Sbjct: 206 TNKASFGNK 214
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 200 bits (487), Expect = 8e-52
Identities = 97/189 (51%), Positives = 128/189 (67%), Gaps = 5/189 (2%)
Query: 22 LYYVLNGKGEQISLGWFLENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKA 81
L+Y+L+G+G + +GWFL +TSP+MW LGI FS++LSV+GA GI TTG SI+GGGVKA
Sbjct: 26 LFYMLSGQGHRFDIGWFLTSTSPHMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKA 85
Query: 82 PRIKTKNLISVIFCEAVAIYGLITAIVLSGMLEKYSE---PFT--SVSVKQQNWMAGYVM 136
PRI+TKNL+S+IFCEAVAI+G+I A V G L ++ P T +++ +N +GY++
Sbjct: 86 PRIRTKNLVSIIFCEAVAIFGIIMAFVFVGKLAEFRREDLPDTEDGMAILARNLASGYMI 145
Query: 137 FGAGLAVGLVNLFCXXXXXXXXXXXXXXXXXXXXXFVKILIVEIFGSAIGLFGLIVGIYM 196
FG GL VGL NL C FVKILI+EIF SAIGLFG+I+GI
Sbjct: 146 FGGGLTVGLSNLVCGLAVGIVGSGAAIADAANPALFVKILIIEIFASAIGLFGMIIGIVQ 205
Query: 197 TSKVKMGNQ 205
T+K GN+
Sbjct: 206 TNKASFGNK 214
>Z29095-8|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 68.9 bits (161), Expect = 2e-12
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 8/150 (5%)
Query: 47 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 106
+G+LG+ ++A + G+A G G I V P + K +I V+ VAIYGL+ A
Sbjct: 25 FGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVA 84
Query: 107 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCXXXXXXXXXXXXXXXX 166
+++SG +E +T + Q F GL GL L
Sbjct: 85 VIVSGKVEPAGANYTINNAFSQ--------FAGGLVCGLCGLGAGYAIGIAGDAGVRALS 136
Query: 167 XXXXXFVKILIVEIFGSAIGLFGLIVGIYM 196
FV ++++ IF +GL+G+IV + +
Sbjct: 137 QQPRMFVGMILILIFAEVLGLYGMIVALIL 166
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 68.9 bits (161), Expect = 2e-12
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 8/150 (5%)
Query: 47 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 106
+G+LG+ ++A + G+A G G I V P + K +I V+ VAIYGL+ A
Sbjct: 25 FGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVA 84
Query: 107 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCXXXXXXXXXXXXXXXX 166
+++SG +E +T + Q F GL GL L
Sbjct: 85 VIVSGKVEPAGANYTINNAFSQ--------FAGGLVCGLCGLGAGYAIGIAGDAGVRALS 136
Query: 167 XXXXXFVKILIVEIFGSAIGLFGLIVGIYM 196
FV ++++ IF +GL+G+IV + +
Sbjct: 137 QQPRMFVGMILILIFAEVLGLYGMIVALIL 166
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 65.7 bits (153), Expect = 2e-11
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 47 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 106
+G +G A + +V+GAA G + V I GV P + K++I VI + IYGL+ A
Sbjct: 17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVA 76
Query: 107 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCXXXXXXXXXXXXXXXX 166
+VL G + TS S + G+ AGL GL L
Sbjct: 77 MVLKGKV-------TSASA-GYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTA 128
Query: 167 XXXXXFVKILIVEIFGSAIGLFGLIVGIYM 196
FV ++++ IF +GL+G+IV + +
Sbjct: 129 QQPRLFVGMILILIFSEVLGLYGMIVALIL 158
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 65.7 bits (153), Expect = 2e-11
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 47 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 106
+G +G A + +V+GAA G + V I GV P + K++I VI + IYGL+ A
Sbjct: 17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVA 76
Query: 107 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCXXXXXXXXXXXXXXXX 166
+VL G + TS S + G+ AGL GL L
Sbjct: 77 MVLKGKV-------TSASA-GYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTA 128
Query: 167 XXXXXFVKILIVEIFGSAIGLFGLIVGIYM 196
FV ++++ IF +GL+G+IV + +
Sbjct: 129 QQPRLFVGMILILIFSEVLGLYGMIVALIL 158
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 65.7 bits (153), Expect = 2e-11
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 47 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 106
+G +G A + +V+GAA G + V I GV P + K++I VI + IYGL+ A
Sbjct: 17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVA 76
Query: 107 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCXXXXXXXXXXXXXXXX 166
+VL G + TS S + G+ AGL GL L
Sbjct: 77 MVLKGKV-------TSASA-GYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTA 128
Query: 167 XXXXXFVKILIVEIFGSAIGLFGLIVGIYM 196
FV ++++ IF +GL+G+IV + +
Sbjct: 129 QQPRLFVGMILILIFSEVLGLYGMIVALIL 158
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 65.7 bits (153), Expect = 2e-11
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 47 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 106
+G +G A + +V+GAA G + V I GV P + K++I VI + IYGL+ A
Sbjct: 17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVA 76
Query: 107 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCXXXXXXXXXXXXXXXX 166
+VL G + TS S + G+ AGL GL L
Sbjct: 77 MVLKGKV-------TSASA-GYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTA 128
Query: 167 XXXXXFVKILIVEIFGSAIGLFGLIVGIYM 196
FV ++++ IF +GL+G+IV + +
Sbjct: 129 QQPRLFVGMILILIFSEVLGLYGMIVALIL 158
>AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine
receptor, class t protein8 protein.
Length = 350
Score = 31.1 bits (67), Expect = 0.58
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 3 YFLSYLFVLLVGLAIPIFSLYYVLNGKGEQISLGWFLENTSPYMWGTLGIAFSVA----- 57
YFL +L VL + L IP++ L VL+ + +SL + + + ++ +GI+F
Sbjct: 52 YFLCFLAVLKLNLKIPVYQLMLVLS-IFDILSLS--VNSVATGIFDIIGISFCQCPHAIF 108
Query: 58 -LSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLS 110
L +G A + + SI+ + I K ++ +F + V L T I+ S
Sbjct: 109 FLGAIGQASWMSGSACSILLAVERCVEINPKFILERLFRKRVFCCVLATIIIYS 162
>AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin
reuptake transporter protein.
Length = 671
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 5 LSYLFVLLVGLAIPIFSLYYVLNGKG 30
L + LL LAIP+F++ Y+L+G G
Sbjct: 602 LGWFLRLLSVLAIPVFAIIYLLSGTG 627
>AF036705-2|AAM98021.1| 237|Caenorhabditis elegans Hypothetical
protein F37C4.4b protein.
Length = 237
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 58 LSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLSGMLEKYS 117
++ V A + + T + + G V R +T ++ ++FC A+ L+ I L+ YS
Sbjct: 92 MNTVSAIVSLLTGAMGL--GAVHRYRWRTMLILWLVFCIMSAVGSLLAVITTGIWLDHYS 149
Query: 118 EPFTSVSVKQQNWMAGYVMFGAGLAVGL 145
+ V N ++G+++ A +A+G+
Sbjct: 150 K--MKVRTAIGNGLSGFMLL-ASVALGV 174
>AF036705-1|AAB95170.1| 249|Caenorhabditis elegans Hypothetical
protein F37C4.4a protein.
Length = 249
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 58 LSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLSGMLEKYS 117
++ V A + + T + + G V R +T ++ ++FC A+ L+ I L+ YS
Sbjct: 104 MNTVSAIVSLLTGAMGL--GAVHRYRWRTMLILWLVFCIMSAVGSLLAVITTGIWLDHYS 161
Query: 118 EPFTSVSVKQQNWMAGYVMFGAGLAVGL 145
+ V N ++G+++ A +A+G+
Sbjct: 162 K--MKVRTAIGNGLSGFMLL-ASVALGV 186
>AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 5 protein.
Length = 671
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 5 LSYLFVLLVGLAIPIFSLYYVLNGKG 30
L + LL LAIP+F++ Y+L+G G
Sbjct: 602 LGWFLRLLSVLAIPVFAIIYLLSGTG 627
>Z83238-1|CAB05792.1| 339|Caenorhabditis elegans Hypothetical
protein T08G3.1 protein.
Length = 339
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/106 (16%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 46 MWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLIT 105
++ T+G+ F++ ++ A G+H+ + + P +K ++V+ ++Y
Sbjct: 46 LFSTVGVLFALLEFLLYPASGLHSHSAAYIVYINNRPFDASKEFLTVLLAVYCSLYCAAI 105
Query: 106 AIVLSGMLEKYSEPFTSVSVKQQN------WMAGYVMFGAGLAVGL 145
+++ + +Y F + +K N W+ V+ G +G+
Sbjct: 106 SLLAVQFIYRYIAVFCPIHLKYFNKCYLLIWIFYAVLIGVEWGIGI 151
>AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical
protein C50D2.2 protein.
Length = 589
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 49 TLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIV 108
++G F + S+VG + S+ G+ + + N + + +A+ I+G +TAI+
Sbjct: 320 SVGALFGMTTSLVGGMFALPRCVFSMADDGLLFSSLASVNPKTQVPTQALLIFGFLTAII 379
>AL132948-17|CAD31817.1| 319|Caenorhabditis elegans Hypothetical
protein Y39B6A.19 protein.
Length = 319
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 62 GAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGL-ITAIVLSGMLEKYSEP 119
G A T +S VG G +PR + L ++++C + G+ +T +LS ++ + EP
Sbjct: 111 GQAFFFAGTLISTVGYGRVSPRTEYGKLFTILYC----VIGIPLTLALLSAIVARMREP 165
>AL110479-3|CAB60312.2| 330|Caenorhabditis elegans Hypothetical
protein Y105C5B.4 protein.
Length = 330
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 46 MWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIF 94
+W +GI F L + G +TT + I G G PR K + S F
Sbjct: 142 LWIGVGIQFLPGLGI-GCCTFFNTTEIYINGNGGIIPRFIDKQMTSTFF 189
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.327 0.143 0.429
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,912,349
Number of Sequences: 27539
Number of extensions: 130418
Number of successful extensions: 453
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 419
Number of HSP's gapped (non-prelim): 25
length of query: 205
length of database: 12,573,161
effective HSP length: 78
effective length of query: 127
effective length of database: 10,425,119
effective search space: 1323990113
effective search space used: 1323990113
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 57 (27.1 bits)
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