GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000230-TA|BGIBMGA000230-PA|IPR013535|PUL
         (294 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    26   0.38 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    26   0.38 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   3.6  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   4.7  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   4.7  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   4.7  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   4.7  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   4.7  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   4.7  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   4.7  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 159 VNAFSDLPGEMLVLAARETVMHSLICLTQLNNN 191
           V  F+D+ G  L+L   ++++  L CL  + NN
Sbjct: 232 VALFNDVFGTCLILITGKSIVQLLTCLNFITNN 264


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 159 VNAFSDLPGEMLVLAARETVMHSLICLTQLNNN 191
           V  F+D+ G  L+L   ++++  L CL  + NN
Sbjct: 232 VALFNDVFGTCLILITGKSIVQLLTCLNFITNN 264


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 15/51 (29%), Positives = 22/51 (43%)

Query: 22  TAVPGLPPPSSRDPFTGSGAYVTQAAISTEKPFVPHDSYIRFDQANIKAIY 72
           T+ PG P  S+      S A  T +  STEK    +++      +N   IY
Sbjct: 151 TSPPGKPATSTTSQNLSSPASSTSSTSSTEKAGTNNNNSKSSQSSNPPQIY 201


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 15/51 (29%), Positives = 22/51 (43%)

Query: 22  TAVPGLPPPSSRDPFTGSGAYVTQAAISTEKPFVPHDSYIRFDQANIKAIY 72
           T+ PG P  S+      S A  T +  STEK    +++      +N   IY
Sbjct: 151 TSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIY 201


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 15/51 (29%), Positives = 22/51 (43%)

Query: 22  TAVPGLPPPSSRDPFTGSGAYVTQAAISTEKPFVPHDSYIRFDQANIKAIY 72
           T+ PG P  S+      S A  T +  STEK    +++      +N   IY
Sbjct: 151 TSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIY 201


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 15/51 (29%), Positives = 22/51 (43%)

Query: 22  TAVPGLPPPSSRDPFTGSGAYVTQAAISTEKPFVPHDSYIRFDQANIKAIY 72
           T+ PG P  S+      S A  T +  STEK    +++      +N   IY
Sbjct: 151 TSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIY 201


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 15/51 (29%), Positives = 22/51 (43%)

Query: 22  TAVPGLPPPSSRDPFTGSGAYVTQAAISTEKPFVPHDSYIRFDQANIKAIY 72
           T+ PG P  S+      S A  T +  STEK    +++      +N   IY
Sbjct: 151 TSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIY 201


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 15/51 (29%), Positives = 22/51 (43%)

Query: 22  TAVPGLPPPSSRDPFTGSGAYVTQAAISTEKPFVPHDSYIRFDQANIKAIY 72
           T+ PG P  S+      S A  T +  STEK    +++      +N   IY
Sbjct: 107 TSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIY 157


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 15/51 (29%), Positives = 22/51 (43%)

Query: 22  TAVPGLPPPSSRDPFTGSGAYVTQAAISTEKPFVPHDSYIRFDQANIKAIY 72
           T+ PG P  S+      S A  T +  STEK    +++      +N   IY
Sbjct: 151 TSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIY 201


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 15/51 (29%), Positives = 22/51 (43%)

Query: 22  TAVPGLPPPSSRDPFTGSGAYVTQAAISTEKPFVPHDSYIRFDQANIKAIY 72
           T+ PG P  S+      S A  T +  STEK    +++      +N   IY
Sbjct: 151 TSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIY 201


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.134    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,807
Number of Sequences: 317
Number of extensions: 2620
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 10
length of query: 294
length of database: 114,650
effective HSP length: 56
effective length of query: 238
effective length of database: 96,898
effective search space: 23061724
effective search space used: 23061724
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)