Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000230-TA|BGIBMGA000230-PA|IPR013535|PUL
(294 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66515-12|CAC42333.1| 860|Caenorhabditis elegans Hypothetical p... 58 7e-09
Z66515-11|CAA91354.1| 858|Caenorhabditis elegans Hypothetical p... 58 7e-09
Z48178-11|CAC42247.1| 860|Caenorhabditis elegans Hypothetical p... 58 7e-09
Z48178-10|CAA88206.1| 858|Caenorhabditis elegans Hypothetical p... 58 7e-09
M98552-2|AAL11480.1| 921|Caenorhabditis elegans Hypothetical pr... 32 0.42
M98552-1|AAA28205.2| 927|Caenorhabditis elegans Hypothetical pr... 32 0.42
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 32 0.56
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 32 0.56
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 32 0.56
AF100661-4|AAC68973.1| 481|Caenorhabditis elegans Hypothetical ... 29 3.9
Z78537-2|CAB01720.2| 604|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z75547-13|CAA99907.2| 445|Caenorhabditis elegans Hypothetical p... 29 5.2
Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical pr... 29 5.2
U80029-12|AAB37591.1| 456|Caenorhabditis elegans Hypothetical p... 28 9.1
AL110484-14|CAB54405.1| 127|Caenorhabditis elegans Hypothetical... 28 9.1
AF016671-6|AAK73904.1| 979|Caenorhabditis elegans Adaptin or ad... 28 9.1
AF016671-5|AAB66112.2| 1251|Caenorhabditis elegans Adaptin or ad... 28 9.1
>Z66515-12|CAC42333.1| 860|Caenorhabditis elegans Hypothetical
protein C05C10.6b protein.
Length = 860
Score = 58.0 bits (134), Expect = 7e-09
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 21/195 (10%)
Query: 105 LFPVLDVTRLAVRNKQINAQMFDTKYGPNFVQYLLTLLAPDNLPANI---MLTMRVLVNA 161
L PVLD R+A+ + +N+ D + G V L+ +L D PA++ +L R + NA
Sbjct: 661 LTPVLDFLRIALTHHSLNSYFCDRERGQELVGRLIAILVSD--PADVALKVLVCRCIANA 718
Query: 162 FSDLPGEMLVLAARETVMHSLICLTQLNNNT--QVAACSLLLNLSVALAQQPDSVE---- 215
FS G L + + + L+ LN T Q++A + L N S+AL QQ + E
Sbjct: 719 FSHPVGRNLFASTELSTLAPLVVRQVLNEKTVLQMSAATALANWSLALLQQSEQCEQLGP 778
Query: 216 ---LAECVLQLLNKITD-----NEAYFRGLVALGTLLAESPNKIQLQSKIVSHTQIHSRL 267
L +L + + +A R L AL T++ + I+L +K + QI +RL
Sbjct: 779 KEDLLRAILNGIESVDSFGYLGEDAIIRLLQALVTVMWGDASVIRL-AKNRNIAQIAARL 837
Query: 268 KRDSTTNPSDATLRK 282
K D+ +N S + +
Sbjct: 838 K-DAVSNDSGKNIAR 851
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 6 FADPLTGESRYVPGSGTAVPGLPPPSSRDPFTGSGAYVTQAAIST 50
+ DP TG RYVP + G DPFTGSG YV QA+ S+
Sbjct: 501 YEDPFTGPGRYVPQGSSNSGG----HGADPFTGSGRYVPQASNSS 541
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 7 ADPLTGESRYVPGSGTAVPGLPPPSSRDPFTGSGAYVTQAAISTEKPFVPHDS 59
ADP TG RYVP + + G S DP TG G Y A +T VP S
Sbjct: 524 ADPFTGSGRYVPQASNS-SGFDTGFSGDPLTGDGGYRASAPENTGSHAVPLSS 575
>Z66515-11|CAA91354.1| 858|Caenorhabditis elegans Hypothetical
protein C05C10.6a protein.
Length = 858
Score = 58.0 bits (134), Expect = 7e-09
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 21/195 (10%)
Query: 105 LFPVLDVTRLAVRNKQINAQMFDTKYGPNFVQYLLTLLAPDNLPANI---MLTMRVLVNA 161
L PVLD R+A+ + +N+ D + G V L+ +L D PA++ +L R + NA
Sbjct: 659 LTPVLDFLRIALTHHSLNSYFCDRERGQELVGRLIAILVSD--PADVALKVLVCRCIANA 716
Query: 162 FSDLPGEMLVLAARETVMHSLICLTQLNNNT--QVAACSLLLNLSVALAQQPDSVE---- 215
FS G L + + + L+ LN T Q++A + L N S+AL QQ + E
Sbjct: 717 FSHPVGRNLFASTELSTLAPLVVRQVLNEKTVLQMSAATALANWSLALLQQSEQCEQLGP 776
Query: 216 ---LAECVLQLLNKITD-----NEAYFRGLVALGTLLAESPNKIQLQSKIVSHTQIHSRL 267
L +L + + +A R L AL T++ + I+L +K + QI +RL
Sbjct: 777 KEDLLRAILNGIESVDSFGYLGEDAIIRLLQALVTVMWGDASVIRL-AKNRNIAQIAARL 835
Query: 268 KRDSTTNPSDATLRK 282
K D+ +N S + +
Sbjct: 836 K-DAVSNDSGKNIAR 849
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 6 FADPLTGESRYVPGSGTAVPGLPPPSSRDPFTGSGAYVTQAAIST 50
+ DP TG RYVP + G DPFTGSG YV QA+ S+
Sbjct: 499 YEDPFTGPGRYVPQGSSNSGG----HGADPFTGSGRYVPQASNSS 539
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 7 ADPLTGESRYVPGSGTAVPGLPPPSSRDPFTGSGAYVTQAAISTEKPFVPHDS 59
ADP TG RYVP + + G S DP TG G Y A +T VP S
Sbjct: 522 ADPFTGSGRYVPQASNS-SGFDTGFSGDPLTGDGGYRASAPENTGSHAVPLSS 573
>Z48178-11|CAC42247.1| 860|Caenorhabditis elegans Hypothetical
protein C05C10.6b protein.
Length = 860
Score = 58.0 bits (134), Expect = 7e-09
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 21/195 (10%)
Query: 105 LFPVLDVTRLAVRNKQINAQMFDTKYGPNFVQYLLTLLAPDNLPANI---MLTMRVLVNA 161
L PVLD R+A+ + +N+ D + G V L+ +L D PA++ +L R + NA
Sbjct: 661 LTPVLDFLRIALTHHSLNSYFCDRERGQELVGRLIAILVSD--PADVALKVLVCRCIANA 718
Query: 162 FSDLPGEMLVLAARETVMHSLICLTQLNNNT--QVAACSLLLNLSVALAQQPDSVE---- 215
FS G L + + + L+ LN T Q++A + L N S+AL QQ + E
Sbjct: 719 FSHPVGRNLFASTELSTLAPLVVRQVLNEKTVLQMSAATALANWSLALLQQSEQCEQLGP 778
Query: 216 ---LAECVLQLLNKITD-----NEAYFRGLVALGTLLAESPNKIQLQSKIVSHTQIHSRL 267
L +L + + +A R L AL T++ + I+L +K + QI +RL
Sbjct: 779 KEDLLRAILNGIESVDSFGYLGEDAIIRLLQALVTVMWGDASVIRL-AKNRNIAQIAARL 837
Query: 268 KRDSTTNPSDATLRK 282
K D+ +N S + +
Sbjct: 838 K-DAVSNDSGKNIAR 851
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 6 FADPLTGESRYVPGSGTAVPGLPPPSSRDPFTGSGAYVTQAAIST 50
+ DP TG RYVP + G DPFTGSG YV QA+ S+
Sbjct: 501 YEDPFTGPGRYVPQGSSNSGG----HGADPFTGSGRYVPQASNSS 541
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 7 ADPLTGESRYVPGSGTAVPGLPPPSSRDPFTGSGAYVTQAAISTEKPFVPHDS 59
ADP TG RYVP + + G S DP TG G Y A +T VP S
Sbjct: 524 ADPFTGSGRYVPQASNS-SGFDTGFSGDPLTGDGGYRASAPENTGSHAVPLSS 575
>Z48178-10|CAA88206.1| 858|Caenorhabditis elegans Hypothetical
protein C05C10.6a protein.
Length = 858
Score = 58.0 bits (134), Expect = 7e-09
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 21/195 (10%)
Query: 105 LFPVLDVTRLAVRNKQINAQMFDTKYGPNFVQYLLTLLAPDNLPANI---MLTMRVLVNA 161
L PVLD R+A+ + +N+ D + G V L+ +L D PA++ +L R + NA
Sbjct: 659 LTPVLDFLRIALTHHSLNSYFCDRERGQELVGRLIAILVSD--PADVALKVLVCRCIANA 716
Query: 162 FSDLPGEMLVLAARETVMHSLICLTQLNNNT--QVAACSLLLNLSVALAQQPDSVE---- 215
FS G L + + + L+ LN T Q++A + L N S+AL QQ + E
Sbjct: 717 FSHPVGRNLFASTELSTLAPLVVRQVLNEKTVLQMSAATALANWSLALLQQSEQCEQLGP 776
Query: 216 ---LAECVLQLLNKITD-----NEAYFRGLVALGTLLAESPNKIQLQSKIVSHTQIHSRL 267
L +L + + +A R L AL T++ + I+L +K + QI +RL
Sbjct: 777 KEDLLRAILNGIESVDSFGYLGEDAIIRLLQALVTVMWGDASVIRL-AKNRNIAQIAARL 835
Query: 268 KRDSTTNPSDATLRK 282
K D+ +N S + +
Sbjct: 836 K-DAVSNDSGKNIAR 849
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 6 FADPLTGESRYVPGSGTAVPGLPPPSSRDPFTGSGAYVTQAAIST 50
+ DP TG RYVP + G DPFTGSG YV QA+ S+
Sbjct: 499 YEDPFTGPGRYVPQGSSNSGG----HGADPFTGSGRYVPQASNSS 539
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 7 ADPLTGESRYVPGSGTAVPGLPPPSSRDPFTGSGAYVTQAAISTEKPFVPHDS 59
ADP TG RYVP + + G S DP TG G Y A +T VP S
Sbjct: 522 ADPFTGSGRYVPQASNS-SGFDTGFSGDPLTGDGGYRASAPENTGSHAVPLSS 573
>M98552-2|AAL11480.1| 921|Caenorhabditis elegans Hypothetical
protein ZK370.3b protein.
Length = 921
Score = 32.3 bits (70), Expect = 0.42
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 228 TDNEAYFRGLVALGTLLAESPNKIQ---LQSKIVSHTQIHSRLKRDSTT-NPSDATLRKI 283
+ N YF+ LV++ TL + +PN +Q L+S H +HS D T+ N D L +
Sbjct: 251 SSNLQYFKYLVSIPTLPSHAPNFLQQSDLESYRTPHAYLHSEGSEDGTSLNGHDGELLNL 310
Query: 284 SICSQQ 289
+ Q
Sbjct: 311 AEAEPQ 316
>M98552-1|AAA28205.2| 927|Caenorhabditis elegans Hypothetical
protein ZK370.3a protein.
Length = 927
Score = 32.3 bits (70), Expect = 0.42
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 228 TDNEAYFRGLVALGTLLAESPNKIQ---LQSKIVSHTQIHSRLKRDSTT-NPSDATLRKI 283
+ N YF+ LV++ TL + +PN +Q L+S H +HS D T+ N D L +
Sbjct: 251 SSNLQYFKYLVSIPTLPSHAPNFLQQSDLESYRTPHAYLHSEGSEDGTSLNGHDGELLNL 310
Query: 284 SICSQQ 289
+ Q
Sbjct: 311 AEAEPQ 316
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 31.9 bits (69), Expect = 0.56
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Query: 18 PGSGTAVPGLPPPSSRDPFTGSGAYVTQAAISTEKPFVPHDSYIRFDQANIKAIYDKLRE 77
P G A P PPP P++ S + A S+ F P DQA +I+ L
Sbjct: 73 PSVGRAPPVPPPPHPSHPYSISSQQSSPAHPSS--AFPPQWPITPTDQAKYDSIFQSLNP 130
Query: 78 FNSKVGDGH 86
N K+ H
Sbjct: 131 VNGKLSGAH 139
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 31.9 bits (69), Expect = 0.56
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Query: 18 PGSGTAVPGLPPPSSRDPFTGSGAYVTQAAISTEKPFVPHDSYIRFDQANIKAIYDKLRE 77
P G A P PPP P++ S + A S+ F P DQA +I+ L
Sbjct: 73 PSVGRAPPVPPPPHPSHPYSISSQQSSPAHPSS--AFPPQWPITPTDQAKYDSIFQSLNP 130
Query: 78 FNSKVGDGH 86
N K+ H
Sbjct: 131 VNGKLSGAH 139
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 31.9 bits (69), Expect = 0.56
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Query: 18 PGSGTAVPGLPPPSSRDPFTGSGAYVTQAAISTEKPFVPHDSYIRFDQANIKAIYDKLRE 77
P G A P PPP P++ S + A S+ F P DQA +I+ L
Sbjct: 118 PSVGRAPPVPPPPHPSHPYSISSQQSSPAHPSS--AFPPQWPITPTDQAKYDSIFQSLNP 175
Query: 78 FNSKVGDGH 86
N K+ H
Sbjct: 176 VNGKLSGAH 184
>AF100661-4|AAC68973.1| 481|Caenorhabditis elegans Hypothetical
protein H20E11.1a protein.
Length = 481
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
Query: 27 LPPPSSRDPFTGSGAYVTQAAISTEKPF-VPHDSYIRFDQANIKAIYDKLREFNSKVGDG 85
LPP + R TG + KP D I A +YDK + GD
Sbjct: 137 LPPSTQRALQTGQNVNYFSLSTVQRKPISFSSDGSISLTLARSGYVYDKFDNYYIIDGDM 196
Query: 86 HNPLSDEQLQN 96
NP S ++L N
Sbjct: 197 DNPKSIQRLDN 207
>Z78537-2|CAB01720.2| 604|Caenorhabditis elegans Hypothetical
protein C09F12.2 protein.
Length = 604
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 118 NKQINAQMFDTKYGPNFVQYLLTLLAPDNLPANI 151
+K+ ++ D KYGP F ++++T P LP +I
Sbjct: 216 DKEEKKRILDNKYGPKFERFIVT-FHPRGLPGDI 248
>Z75547-13|CAA99907.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3 protein.
Length = 445
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 2 EVHSFADPLTGESRYVPGSGTAVPGLPPPSSRDPFTGSG 40
EVH A+ + + + G+G + P PPP +P+ GSG
Sbjct: 192 EVHQ-AEQILIDFKNAGGNGPSGPDGPPPPPSNPYGGSG 229
>Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3 protein.
Length = 445
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 2 EVHSFADPLTGESRYVPGSGTAVPGLPPPSSRDPFTGSG 40
EVH A+ + + + G+G + P PPP +P+ GSG
Sbjct: 192 EVHQ-AEQILIDFKNAGGNGPSGPDGPPPPPSNPYGGSG 229
>U80029-12|AAB37591.1| 456|Caenorhabditis elegans Hypothetical
protein T20D4.6 protein.
Length = 456
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 17 VPGSGTAVPGLPPPSSRDPFTGSGAYVTQAAISTEKPFVP 56
V +P PPPS ++ G G V A +P+VP
Sbjct: 400 VQDGNAVIPSAPPPSYQESMYGKGGTVLDA--KENEPYVP 437
>AL110484-14|CAB54405.1| 127|Caenorhabditis elegans Hypothetical
protein Y38E10A.14 protein.
Length = 127
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 82 VGDGHNPLSDEQLQNVVKLGELILFP 107
V DG + DE N++KL L LFP
Sbjct: 57 VWDGQGTIRDETKSNIIKLTYLYLFP 82
>AF016671-6|AAK73904.1| 979|Caenorhabditis elegans Adaptin or
adaptin-related proteinprotein 5, isoform b protein.
Length = 979
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 198 SLLLNLSVALAQQPDSVELAECVLQLLNKITDNEAYFRGLVALGTLLAESPNKIQLQSKI 257
++L+++S S++L L +L + +D + GL+A+G +L P +Q I
Sbjct: 13 AVLISISAG-GDHTASIQLCVQKLGVLIEDSDQNLKYLGLLAMGKILKTHPKAVQAHKDI 71
Query: 258 V 258
V
Sbjct: 72 V 72
>AF016671-5|AAB66112.2| 1251|Caenorhabditis elegans Adaptin or
adaptin-related proteinprotein 5, isoform a protein.
Length = 1251
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 198 SLLLNLSVALAQQPDSVELAECVLQLLNKITDNEAYFRGLVALGTLLAESPNKIQLQSKI 257
++L+++S S++L L +L + +D + GL+A+G +L P +Q I
Sbjct: 285 AVLISISAG-GDHTASIQLCVQKLGVLIEDSDQNLKYLGLLAMGKILKTHPKAVQAHKDI 343
Query: 258 V 258
V
Sbjct: 344 V 344
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.134 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,964,105
Number of Sequences: 27539
Number of extensions: 276463
Number of successful extensions: 855
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 826
Number of HSP's gapped (non-prelim): 26
length of query: 294
length of database: 12,573,161
effective HSP length: 81
effective length of query: 213
effective length of database: 10,342,502
effective search space: 2202952926
effective search space used: 2202952926
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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