BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000228-TA|BGIBMGA000228-PA|undefined
(1493 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 38 0.001
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 33 0.056
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 31 0.30
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 30 0.52
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 29 0.91
AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription fact... 28 1.6
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 28 1.6
AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2 pro... 28 2.1
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 28 2.1
AF543192-1|AAN40409.1| 636|Anopheles gambiae amino acid transpo... 27 3.7
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 27 4.9
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 27 4.9
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 27 4.9
AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical prot... 27 4.9
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 26 6.4
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 26 6.4
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 26 6.4
AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein. 26 8.5
AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein. 26 8.5
AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein. 26 8.5
AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein. 26 8.5
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 26 8.5
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 38.3 bits (85), Expect = 0.001
Identities = 44/230 (19%), Positives = 104/230 (45%), Gaps = 14/230 (6%)
Query: 976 TIPTFKKETCEKLAFVQQRFDKPPPKLIIKDTQKKEELLVNALNKEKRKEKQITMT---R 1032
T K E EK V++ + + K++ KE L N+L+K + + + T R
Sbjct: 342 TYDALKAERVEKEKLVKEEIKQYDELVSAKES--KESTLKNSLDKFAKVQANMRATNERR 399
Query: 1033 PQVL-QVVDSRNKMQKVTNLNKIADTNATSSDIKMDTSPEYKDYKDSKNESDVK-LSDAI 1090
+ L Q+ ++ ++ ++ K S+ K+++ K ++K +++ L D
Sbjct: 400 KKTLEQIAAEEKRLLELQDVPKKNKKEIEESEAKIESLTRQKTEVEAKLTANLATLKDET 459
Query: 1091 KTDIEYQEKINSVKNYWSKLIDKSPELKEISEQDKVIEDHLNRTSVTDSQTGREIEKEKF 1150
K +E +EK+ + + +D+S I+E + I H VT+ R++E ++
Sbjct: 460 KVLLEEKEKLQTELIELKRAVDESKSALSIAESELKICQH---DEVTER---RKLESLRY 513
Query: 1151 ISDLSVGSIIKSLESVKIVDSIRKISQTKLQLWKEE-TEKVKSDSEIEET 1199
+ + + + ++ ++ +++T+L+ K++ E + E+ +T
Sbjct: 514 SYEETEKDLEEKRARLQTLEEALPVTRTELETAKQKLQENANEERELTQT 563
Score = 31.1 bits (67), Expect = 0.23
Identities = 68/329 (20%), Positives = 124/329 (37%), Gaps = 38/329 (11%)
Query: 1173 RKISQTKLQLWKEETEK-VKSDSEIEETPVEKIVKEFDANIYEKPKTTSNISETDSNRDT 1231
+KI KL + + K ++S ++IV D + E P + ++ T + RD
Sbjct: 123 QKIRSKKLSVLMHNSAKHPNTNSCTVGVHFKQIVDREDGSFDEVPNSAFVVART-AFRDN 181
Query: 1232 PEIEIVELSSDDNQNQKTQATLIKPKGFDKECDDFDHVRYKVMKSELFKNSMIANYRKEA 1291
++ + + K + L+K G D DH R+ +++ E+ +M+ + +
Sbjct: 182 SSYYTID---NKRVHFKEVSKLLKQHGID-----LDHNRFLILQGEVESIAMMKSKAQTE 233
Query: 1292 QFDGLLQYLQD------YSFQELLVNNNIVIIEPVRT----KIEPAPRKATDTRKIPPTL 1341
GLL+YL+D Y L +N + + RT + + A R+ D K
Sbjct: 234 NDCGLLEYLEDIVGTTRYKVPLLKINERVDALNEERTEKHNRCKLAEREMKDLEKPKTEA 293
Query: 1342 LKRNEDNISQTDKAKNAIKRHFFYHPIRVNKEIIEEELPNPDTVKKKQEFKPYDATNTKK 1401
++ + + T I+++ ++ + E E + K + + YDA ++
Sbjct: 294 VEYLKQENTLTRTRNQQIQKYLCEQKRKIGE--FEVERDQAAGILAKHD-ETYDALKAER 350
Query: 1402 NENNSSQDAPVIVNFSKKEESSERDTESVGSCKTSTSDTSLDPQSFEKKYYYVNENSDKN 1461
E K+E + S K ST SLD K+ V N
Sbjct: 351 VEKE---------KLVKEEIKQYDELVSAKESKESTLKNSLD------KFAKVQANMRAT 395
Query: 1462 KEKTTKFGEMVFEEFEVLETCYDSLNSNK 1490
E+ K E + E + L D NK
Sbjct: 396 NERRKKTLEQIAAEEKRLLELQDVPKKNK 424
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 3 IKHSVDSVASYSSQNHVD--RIRAQNYSTASCQDEGDFGSIKTSLFRRSVE 51
+K VD A ++ H D ++RA A C+ D S K +++V+
Sbjct: 831 LKEQVDWQAERVARTHSDPEKVRALEAKVAECKQAFDSSSTKADAMQKNVD 881
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
structural protein protein.
Length = 1645
Score = 33.1 bits (72), Expect = 0.056
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 1053 KIADTNATSSDIKMDTSPEYKDYKDSKNESDVKLSDAIKTDIEYQEKINSVKNYWSKLID 1112
++ + NA S + + E + ES ++ D I+ E I+ +K Y +I
Sbjct: 1035 EVIELNADVSFLIICPPAESSCAVPGQKESLLQRGDLFSMPIQAFEMIH-LKTYQGSIIQ 1093
Query: 1113 KSPELKEISEQDKVIEDHLNRTSVTDSQTGREIEKEKFISDLSVG 1157
K L I E D ++ +HL+R + + S+ + ++ + +LS G
Sbjct: 1094 KYSRLSCILELDTMLANHLHREAFSSSELQKAKDRLAKLQELSGG 1138
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 30.7 bits (66), Expect = 0.30
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Query: 338 SKVTNKSQESLSNSRHPSEIDSLDSNYVRKHYNFEAHRQNYKDSSPETERSLVSPNPSKE 397
++ +K S +R P ++ + + N + Y +S +++S P+ E
Sbjct: 389 AEAASKMARSFIPAREPEDLHTTTHKSPEREDNPSQPYEAYLESVRRSKKSF--PHKDAE 446
Query: 398 LYVTTDEHCSDNEDKNRSEINTPKSYTNDSLTRSEKDKNDEFP 440
+ E C D E ++R + PKS T D L +K FP
Sbjct: 447 GVTESAEDCYDKEKEHRIPYSLPKS-TFDRLDLLKKPNGLPFP 488
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 29.9 bits (64), Expect = 0.52
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 1320 VRTKIEPAPRKATDTRKIPPTLLKRNEDNISQTDKAKNAIK 1360
+R E R D R+I L +RN D +SQ ++ K A++
Sbjct: 405 MRNASERVTRIQKDARQIEQDLQERNRDGLSQVEQRKQAVE 445
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 29.1 bits (62), Expect = 0.91
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 893 DPPVKNDLNNNNKQSIPIDRVIQQNSLET-LSHSIK---ELQTNNEKHSENFDEIQHTGD 948
D ++ +L + NKQ D++ QN L+ L I EL+ ++H+E+F++++ D
Sbjct: 392 DKWIQGELKSLNKQIK--DKISHQNKLQDDLKKDIAKQGELEKKIQEHTESFEQLRVQID 449
Query: 949 DKFIDTSSLRTSKDPFVTI-----KLNKVVKTTIPTFKKETCEKLAFVQQRFDKP 998
+ + L+ KD + ++ K V T+ +K+E ++ KP
Sbjct: 450 EHNKNFYELKKKKDHYQSLRNDIWKKETAVTQTLSGYKEELARADQALRSMAGKP 504
Score = 25.8 bits (54), Expect = 8.5
Identities = 35/220 (15%), Positives = 88/220 (40%), Gaps = 4/220 (1%)
Query: 1073 KDYKDSKNESDVKLSDAIKTDIEYQEKINSVKNYWSKLIDKSPELKEISEQDKVIEDHLN 1132
K KD+K + + E+Q+ + + D S E++ ++ + E L
Sbjct: 272 KALKDAKKDVVTAKDEKSVLATEHQQLLREKTKLDLTISDLSDEVQGDNKSKERAEQELE 331
Query: 1133 RTSVTDSQTGREIEKEKFISDLSVGSIIKSLESVKIVDSIRKISQTKLQLWKEETEKVKS 1192
R +T ++ +E+E+ + + + + + + RK K + + K +
Sbjct: 332 RLKITIAEKEKELEQVRPRYEAMRRKEEECSRELNLKEQKRKELYAKQGRGSQFSSKEER 391
Query: 1193 DSEIEETPVEKIVKEFDANIYEKPKTTSNISETDSNRDTPEIEIVELSSDDNQNQKTQAT 1252
D I + ++ + K+ I + K ++ + + + E +I E ++ + + Q
Sbjct: 392 DKWI-QGELKSLNKQIKDKISHQNKLQDDLKKDIAKQGELEKKIQE-HTESFEQLRVQID 449
Query: 1253 LIKPKGFD--KECDDFDHVRYKVMKSELFKNSMIANYRKE 1290
++ K+ D + +R + K E ++ Y++E
Sbjct: 450 EHNKNFYELKKKKDHYQSLRNDIWKKETAVTQTLSGYKEE 489
>AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription factor
protein.
Length = 391
Score = 28.3 bits (60), Expect = 1.6
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Query: 1005 KDTQKKEELLVNALNKEKRKEKQITMTRPQVLQVVDS-RNKMQKVTNLNKIADTNATSSD 1063
++ K++ A + + E+Q T+ + V+DS R +K T A T AT S
Sbjct: 92 REPAPKKQAPAKAKEPKAKAERQSTLRKRPKFTVIDSGRKSFRKST----AAKTAATQSR 147
Query: 1064 IKMDTSPEYKDYKDSKNESDVKLSDAIKTDIEYQEKIN 1101
+K E K + + E + + + + E E+ N
Sbjct: 148 LKQRFEAERKRTRVIRTEEYIPTQEELLEEAEITEREN 185
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 838 TVEKSLNK--QFTTELIKPSTEDL-IKQSLLSRVQSFKTSAASNIALLPLSGHQTIVIDP 894
T++ S N+ + T I S E L + +L+S+VQS+ N+ + L G++ +DP
Sbjct: 598 TIDASSNQLTEITGSAIPNSVELLYLNDNLISKVQSYTFFKKPNLTRVDLFGNKITTLDP 657
>AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2
protein.
Length = 755
Score = 27.9 bits (59), Expect = 2.1
Identities = 31/140 (22%), Positives = 57/140 (40%), Gaps = 8/140 (5%)
Query: 297 NAHRKSPEQKDCTTEKEDAVSRNDSQRSQSVSGSWPNLNEESKVTNKSQESLSNSRHPSE 356
N R + E D ++ + S +DS S S S S + +EE K + + E
Sbjct: 354 NFVRPANETDDSSSSSSSSSSDSDSDSSSS-SDSSSSSSEEEAENFKISPAEQYKKQAKE 412
Query: 357 IDSLDSNYVRKHYNFEAHRQNYKDSSPETERSLVSPNPSKELYVTTDEHCSDNEDKNRSE 416
++ N R+ N +Q Y+ + R K+ ++D SD+ + S
Sbjct: 413 VER-RGNRNRRDLNAFKEKQYYEAYKRDQYRL------RKQNDTSSDSSSSDDSSSSSSS 465
Query: 417 INTPKSYTNDSLTRSEKDKN 436
++ +S +D + SE D +
Sbjct: 466 SSSSESDEHDFYSSSESDSD 485
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
protein.
Length = 2051
Score = 27.9 bits (59), Expect = 2.1
Identities = 31/140 (22%), Positives = 57/140 (40%), Gaps = 8/140 (5%)
Query: 297 NAHRKSPEQKDCTTEKEDAVSRNDSQRSQSVSGSWPNLNEESKVTNKSQESLSNSRHPSE 356
N R + E D ++ + S +DS S S S S + +EE K + + E
Sbjct: 354 NFVRPANETDDSSSSSSSSSSDSDSDSSSS-SDSSSSSSEEEAENFKISTAEQYKKQAKE 412
Query: 357 IDSLDSNYVRKHYNFEAHRQNYKDSSPETERSLVSPNPSKELYVTTDEHCSDNEDKNRSE 416
++ N R+ N +Q Y+ + R K+ ++D SD+ + S
Sbjct: 413 VER-RGNRNRRDLNAFKEKQYYEAYKRDQYRL------RKQNDTSSDSSSSDDSSSSSSS 465
Query: 417 INTPKSYTNDSLTRSEKDKN 436
++ +S +D + SE D +
Sbjct: 466 SSSSESDEHDFYSSSESDSD 485
>AF543192-1|AAN40409.1| 636|Anopheles gambiae amino acid
transporter Ag_AAT8 protein.
Length = 636
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 298 AHRKSPEQKDCTTEKEDAVSRNDSQRSQSVSGSW 331
AH +S Q +C + S NDS +++++ SW
Sbjct: 197 AHCRSEWQPNCIDSLAGSASPNDSSSNRTLTSSW 230
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 1362 HFFYHPIRVNKEIIEEELPNPDTVKKKQEFKPYDATNTKK--NENNSSQDAPVIVN-FSK 1418
H +Y P + + I + ++ F+PYD + + + + N SS P+ ++ +
Sbjct: 197 HHYYQPSPSHPQPIVPQPQRASLERRDSLFRPYDISKSPRLCSSNGSSSATPLPLHPYHT 256
Query: 1419 KEESSERDTESVGSCKT 1435
+ S +D+ S S T
Sbjct: 257 DSDCSTQDSTSAPSPAT 273
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 1362 HFFYHPIRVNKEIIEEELPNPDTVKKKQEFKPYDATNTKK--NENNSSQDAPVIVN-FSK 1418
H +Y P + + I + ++ F+PYD + + + + N SS P+ ++ +
Sbjct: 197 HHYYQPSPSHPQPIVPQPQRASLERRDSLFRPYDISKSPRLCSSNGSSSATPLPLHPYHT 256
Query: 1419 KEESSERDTESVGSCKT 1435
+ S +D+ S S T
Sbjct: 257 DSDCSTQDSTSAPSPAT 273
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2
protein.
Length = 961
Score = 26.6 bits (56), Expect = 4.9
Identities = 30/129 (23%), Positives = 45/129 (34%), Gaps = 6/129 (4%)
Query: 333 NLNEESKVTNKSQESLSNSRHPSEIDSLDSNYVRKHYNFEAHRQNYKDS-SPETERSLVS 391
NL + Q+ LSNS E D+L + +Y +E ++ Y E + S
Sbjct: 678 NLTSAGTRFSNLQDQLSNSLMSLECDALATKLKPNNYEYERNQNIYNSQFKVEYSDNFNS 737
Query: 392 PNPSKELYVTTDEHCSDNEDKNRSEINTPKSYTNDSLTRSEKDKNDEFPNVTKADTYDNF 451
+ + +NED +N S D LT PN AD D
Sbjct: 738 GYGLRNAVFYGGKREDENEDTKADNMNNNHS---DQLTGDNSADERAVPN--DADDDDES 792
Query: 452 SAQSSQRND 460
+ + Q D
Sbjct: 793 TMTTLQATD 801
>AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical protein
protein.
Length = 257
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 178 LQKRFANSDSEFCNSYGRLCKHKEPEGSNLRRSRSLAVI 216
L+ FA +FCN+ R K PE + R+ L I
Sbjct: 146 LKHTFAQEAKQFCNAEIRAAKADSPENCHSNRAEFLIAI 184
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 430 RSEKDKNDEFPNVTKADTYDNFSAQSSQRNDT 461
R +D+ D PN + ++ +N ++ S+ N+T
Sbjct: 183 RDSRDERDSLPNASSNNSNNNNNSSSNNNNNT 214
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 430 RSEKDKNDEFPNVTKADTYDNFSAQSSQRNDT 461
R +D+ D PN + ++ +N ++ S+ N+T
Sbjct: 183 RDSRDERDSLPNASSNNSNNNNNSSSNNNNNT 214
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 430 RSEKDKNDEFPNVTKADTYDNFSAQSSQRNDT 461
R +D+ D PN + ++ +N ++ S+ N+T
Sbjct: 135 RDSRDERDSLPNASSNNSNNNNNSSSNNNNNT 166
>AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 370 NFEAHRQNYKDSSPETERSLVSPNPSKELYVTTDEHCSDNEDKNRSEINTPKSYTNDSLT 429
N + ++ +K +S +++ + N + D S + R ++NT T +LT
Sbjct: 69 NMKQAQEAHKKASEALKKANDAFNQQANITKELDTSISSEIAQAREKLNTVSKLTEQALT 128
Query: 430 RSEKDKNDE 438
R+ ++ NDE
Sbjct: 129 RA-REVNDE 136
>AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 370 NFEAHRQNYKDSSPETERSLVSPNPSKELYVTTDEHCSDNEDKNRSEINTPKSYTNDSLT 429
N + ++ +K +S +++ + N + D S + R ++NT T +LT
Sbjct: 69 NMKQAQEAHKKASEALKKANDAFNQQANITKELDTSISSEIAQAREKLNTVSKLTEQALT 128
Query: 430 RSEKDKNDE 438
R+ ++ NDE
Sbjct: 129 RA-REVNDE 136
>AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 370 NFEAHRQNYKDSSPETERSLVSPNPSKELYVTTDEHCSDNEDKNRSEINTPKSYTNDSLT 429
N + ++ +K +S +++ + N + D S + R ++NT T +LT
Sbjct: 69 NMKQAQEAHKKASEALKKANDAFNQQANITKELDTSISSEIAQAREKLNTVSKLTEQALT 128
Query: 430 RSEKDKNDE 438
R+ ++ NDE
Sbjct: 129 RA-REVNDE 136
>AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 370 NFEAHRQNYKDSSPETERSLVSPNPSKELYVTTDEHCSDNEDKNRSEINTPKSYTNDSLT 429
N + ++ +K +S +++ + N + D S + R ++NT T +LT
Sbjct: 69 NMKQAQEAHKKASEALKKANDAFNQQANITKELDTSISSEIAQAREKLNTVSKLTEQALT 128
Query: 430 RSEKDKNDE 438
R+ ++ NDE
Sbjct: 129 RA-REVNDE 136
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 370 NFEAHRQNYKDSSPETERSLVSPNPSKELYVTTDEHCSDNEDKNRSEINTPKSYTNDSLT 429
N + ++ +K +S +++ + N + D S + R ++NT T +LT
Sbjct: 1208 NMKQAQEAHKKASEALKKANDAFNQQANITKELDTSISSEIAQAREKLNTVSKLTEQALT 1267
Query: 430 RSEKDKNDE 438
R+ ++ NDE
Sbjct: 1268 RA-REVNDE 1275
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.307 0.125 0.339
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,443,627
Number of Sequences: 2123
Number of extensions: 59191
Number of successful extensions: 206
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 181
Number of HSP's gapped (non-prelim): 37
length of query: 1493
length of database: 516,269
effective HSP length: 73
effective length of query: 1420
effective length of database: 361,290
effective search space: 513031800
effective search space used: 513031800
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 54 (25.8 bits)
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