GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000227-TA|BGIBMGA000227-PA|undefined
         (68 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5CI37 Cluster: Putative uncharacterized protein; n=2; ...    32   2.6  

>UniRef50_Q5CI37 Cluster: Putative uncharacterized protein; n=2;
          Cryptosporidium|Rep: Putative uncharacterized protein -
          Cryptosporidium hominis
          Length = 277

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 2  KIDFEPCYPKSTAVDYEETEKXXXXXXXXATTSMMNPY---QDQETIRPIKLKASVRIHK 58
          KI  +   PKST++   ++ K        ATT   N +   ++Q T++P+  K   +  K
Sbjct: 26 KISVKKETPKSTSLSSSKSRKSSLSKSSIATTKASNSHPIKKEQGTVKPVVKKTISKTSK 85

Query: 59 TGSQV 63
           G ++
Sbjct: 86 KGGEI 90


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.315    0.129    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,418,899
Number of Sequences: 1657284
Number of extensions: 1139270
Number of successful extensions: 1574
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1574
Number of HSP's gapped (non-prelim): 1
length of query: 68
length of database: 575,637,011
effective HSP length: 47
effective length of query: 21
effective length of database: 497,744,663
effective search space: 10452637923
effective search space used: 10452637923
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)