BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000227-TA|BGIBMGA000227-PA|undefined (68 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_6098| Best HMM Match : Gal-3-0_sulfotr (HMM E-Value=1e-39) 25 8.5 >SB_6098| Best HMM Match : Gal-3-0_sulfotr (HMM E-Value=1e-39) Length = 463 Score = 25.0 bits (52), Expect = 8.5 Identities = 12/38 (31%), Positives = 20/38 (52%) Query: 31 ATTSMMNPYQDQETIRPIKLKASVRIHKTGSQVDLRVF 68 +T+S N D+E+ P + ++ HKTGS +F Sbjct: 53 STSSSDNQKMDEESCVPEQSIVFLKTHKTGSSTLTNIF 90 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.315 0.129 0.365 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,713,055 Number of Sequences: 59808 Number of extensions: 35583 Number of successful extensions: 49 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 48 Number of HSP's gapped (non-prelim): 1 length of query: 68 length of database: 16,821,457 effective HSP length: 47 effective length of query: 21 effective length of database: 14,010,481 effective search space: 294220101 effective search space used: 294220101 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits) S2: 52 (25.0 bits)
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