Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000226-TA|BGIBMGA000226-PA|IPR000618|Insect cuticle
protein
(398 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1198 + 35341375-35341635,35341750-35341953,35342151-353427... 33 0.40
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183... 32 0.92
01_06_1793 - 39916024-39916824 31 1.6
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440... 31 2.1
01_01_1237 - 10047417-10047934,10048899-10049136 31 2.1
04_01_0103 + 1082077-1082167,1083037-1085477 30 2.8
02_04_0017 + 18937774-18937864,18938505-18940945 30 2.8
02_01_0035 - 220036-221419,222050-222801 30 2.8
01_06_1260 - 35820781-35821161,35821163-35821420,35821524-35821976 30 3.7
12_02_0588 - 20842209-20842337,20842464-20842560,20842620-208427... 29 8.6
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859... 29 8.6
11_06_0184 - 21006659-21009823 29 8.6
11_01_0542 - 4280457-4280984,4281533-4281828,4281918-4282083 29 8.6
10_06_0004 - 9407954-9408007,9408219-9408386,9408441-9408542,940... 29 8.6
08_02_1087 + 24245535-24246350 29 8.6
03_05_0370 + 23541188-23542537 29 8.6
02_04_0056 + 19313422-19313967,19314035-19314168,19314263-193143... 29 8.6
>01_06_1198 +
35341375-35341635,35341750-35341953,35342151-35342737,
35342825-35342986,35343096-35343549
Length = 555
Score = 33.1 bits (72), Expect = 0.40
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 344 AGPITSAETDNAPNLQTDGGYSQPAFSQSGNEDLGYVDEDAGYGGSKPTKGP 395
A P + ++ AP +Q GGYSQP SQ + D GY G K ++ P
Sbjct: 189 AAPFQATSSEMAPQVQGGGGYSQPQ-SQRRSSDDGYNWRKYGQKQVKGSENP 239
>12_02_1280 -
27517683-27517871,27517955-27518029,27518155-27518318,
27518424-27518538,27518783-27519074,27519162-27519318,
27519438-27519510,27520309-27520377,27520471-27520694,
27520800-27520981,27521067-27522064,27522335-27522580
Length = 927
Score = 31.9 bits (69), Expect = 0.92
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 139 SKNENADSRGDVKGHYSYVDDIGERHDVSYIAGRDTGFHV--SSAHPDNPGVIGS 191
++ +NAD +GD + ++ +HD S +T F V S AH D G +G+
Sbjct: 481 NRGDNADLKGDNDSRFVASEEAENKHDSSDAIVGETDFTVGKSPAHNDGAGTLGN 535
>01_06_1793 - 39916024-39916824
Length = 266
Score = 31.1 bits (67), Expect = 1.6
Identities = 52/233 (22%), Positives = 80/233 (34%), Gaps = 16/233 (6%)
Query: 168 YIAGRDTGFHVSSAHPDNPGVIGSPFHRAPLVRGETKARGRTAVQ-RGLDGSYRFISAGP 226
Y AG D+ D G GS R+P E R + R GS G
Sbjct: 18 YYAGSDSSSFAGGGGDDRYGRAGSGNGRSPWTTSEEYPRYTSDDDNRSGSGSDDDDDHGD 77
Query: 227 -DQRRTESSDSQGNVRGSYTF-LDDKGVQRTVNYIAGPGIGYRIIKNNKDAIPSYFPTLP 284
++RR + S+ + + S ++ DD G +R +Y G G N + S P+
Sbjct: 78 RNRRRGKKSNKKKSSSSSSSYKYDDDGGERDRSYSNYGGYG------NNEGYSSSAPSGY 131
Query: 285 SPYD-------PTFTNXXXXXXXXXXXXXXXXXXXXVFKGPEGTAASGHVKPPPFQVSES 337
+PY+ P++ N G G P + +
Sbjct: 132 NPYNNGGGYGGPSYGNGGGYGGSTYGNGGGYGGSSYGNGGAIVAGGGGGSAPASYGYGSN 191
Query: 338 EIPEGPAGPITSAETDNAPNLQTDGGYSQPAFSQSGNEDLGYVDEDAGYGGSK 390
PA P + +AP +QP S S NE+ G ++ G GG +
Sbjct: 192 SGWGAPAPPRQEGGSGSAPTYLNVIYMTQPGSSSSQNENSGERRDNGGGGGGR 244
>09_04_0684 -
19442335-19442990,19443774-19443839,19443935-19444032,
19444787-19445157
Length = 396
Score = 30.7 bits (66), Expect = 2.1
Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 323 ASGHVKPPPFQVSESEIPEGPAGPITSAETDNAPNLQTDG-GY--SQPAFSQSGNEDLGY 379
A G+ PP ++ +GP P SA N P Q G GY P Q GN GY
Sbjct: 302 APGYQGGPPGYQGSNQGYQGPPPPPPSAYQGNNPGYQGGGPGYQGGNPPPYQGGNP--GY 359
Query: 380 VDEDAGYGGSKPTKGPGD 397
G GG+ + GD
Sbjct: 360 APGYHGQGGNPSYQQGGD 377
>01_01_1237 - 10047417-10047934,10048899-10049136
Length = 251
Score = 30.7 bits (66), Expect = 2.1
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 317 GPEGTAASGHVKPPPFQVSESE-IPEGPAGPITSAETDNAPNLQTDGG 363
GP +A + PP F S + + PA T+A D+A + T GG
Sbjct: 179 GPSSSAGAAADAPPTFDFSHPKNVSNSPADTSTTAPLDDADDAPTTGG 226
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 30.3 bits (65), Expect = 2.8
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 75 PATDTVKETIYTAGPRGFRAKGPNVHRQLDLDQRP--RGPIGNKDDPFFDPNEDP 127
P + +ET+ R +K PN H +L ++ RP G DD P +DP
Sbjct: 559 PPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDP 613
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 30.3 bits (65), Expect = 2.8
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 75 PATDTVKETIYTAGPRGFRAKGPNVHRQLDLDQRP--RGPIGNKDDPFFDPNEDP 127
P + +ET+ R +K PN H +L ++ RP G DD P +DP
Sbjct: 559 PPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDP 613
>02_01_0035 - 220036-221419,222050-222801
Length = 711
Score = 30.3 bits (65), Expect = 2.8
Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 3/82 (3%)
Query: 320 GTAASGHVKPP---PFQVSESEIPEGPAGPITSAETDNAPNLQTDGGYSQPAFSQSGNED 376
G+AASG PP PF + G G S T + DGG + G
Sbjct: 161 GSAASGAAAPPGVPPFLAAAMSFKLGVDGGGGSGATGGTDDALNDGGGAGSGMMLHGGGG 220
Query: 377 LGYVDEDAGYGGSKPTKGPGDE 398
G +D S+ + PGDE
Sbjct: 221 GGGGGDDEAATESRLRRWPGDE 242
>01_06_1260 - 35820781-35821161,35821163-35821420,35821524-35821976
Length = 363
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 126 DPSYAFNFDTRTYSKNENADSRGDVKGHYSYVDDIGERHDVSYIAGRDTG 175
D SY++++ YS + + V Y+Y G + S + G D G
Sbjct: 272 DASYSYDYSAAGYSDYRSGSNSSSVNSCYNYNRKDGAATEASVVGGSDNG 321
>12_02_0588 -
20842209-20842337,20842464-20842560,20842620-20842733,
20843140-20843749,20844739-20845462,20845542-20845620,
20845783-20845865,20846148-20846226,20846332-20846420,
20846499-20846591,20847288-20847337,20847417-20847600,
20849227-20849542,20849626-20849657
Length = 892
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 180 SAHPDNPGVIGSPFHRAPLVRGETKARGRTAVQRGLDGSYRFISAGPDQRRTESSDSQ 237
S+ P+ PG SP + +G+ R R ++ + +DGS S P +R E S +
Sbjct: 696 SSQPEEPGTWASPQEELNVAKGQRSKRKRPSLDK-MDGSE---SKAPAAKRHEQSTGE 749
>11_06_0561 -
24984960-24985205,24985283-24985354,24985906-24985977,
24986612-24986782,24987464-24987653,24987733-24987976,
24988162-24988474,24988687-24989517,24989628-24989672,
24989677-24989790,24989877-24990371,24990627-24990824,
24990902-24991357
Length = 1148
Score = 28.7 bits (61), Expect = 8.6
Identities = 16/50 (32%), Positives = 21/50 (42%)
Query: 48 NKDRGSSYHLAHGTANGVVGGRFGGKDPATDTVKETIYTAGPRGFRAKGP 97
++D G+S H G A+ GG G PA AG +G GP
Sbjct: 29 DEDAGTSSHAVAGEASSGAGGGADGGSPAPRAASPPPTAAGGQGGGGGGP 78
>11_06_0184 - 21006659-21009823
Length = 1054
Score = 28.7 bits (61), Expect = 8.6
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 331 PFQVSESEIPEGPAGPITSAETDNAPNLQTDGGYSQPAFSQSGNEDLGYVDEDAGYGGS 389
PF + E+ E PA + E P L +DGG QP QS + + GG+
Sbjct: 187 PFTLDRYEV-EPPARLDSDDEQQPRPQLNSDGGKEQPLAPQSDGRNKEQLPPPQSGGGN 244
>11_01_0542 - 4280457-4280984,4281533-4281828,4281918-4282083
Length = 329
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 349 SAETDNAPNLQTDGGYSQPAFSQSGNEDLGYVDEDAGYGGSKPTKGPG 396
SA+ D+ P L TD S+ S S + D D Y S+P+ G G
Sbjct: 231 SADRDSMPRLHTDSSGSEHVLSPSPSPDDFPGGGDHDYAESQPSGGCG 278
>10_06_0004 -
9407954-9408007,9408219-9408386,9408441-9408542,
9408710-9408934,9409889-9410047,9411768-9411900,
9412827-9413758,9413842-9413987,9415863-9416082
Length = 712
Score = 28.7 bits (61), Expect = 8.6
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 67 GGRFGGKDPATDTVKETIYTAGPRGFRAKGPNVHRQLDLDQ-RPRGPIGNKDDPFFDPNE 125
GG +P V + RG AK V L DQ + P+G+ D F + E
Sbjct: 80 GGPGNYTNPKAPAVLSKVRDLVNRGQYAKATAVAYGLSGDQTQVYQPLGDIDLAFDEHVE 139
Query: 126 DPSYAFNFDTRTYSKN 141
D +Y N D RT + N
Sbjct: 140 DTNYKRNLDLRTATVN 155
>08_02_1087 + 24245535-24246350
Length = 271
Score = 28.7 bits (61), Expect = 8.6
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 27 RANDGDYNTVNTDGSF-DFGYANKDRGSSYHLAHGTANGV--VGGRFGGKDP----ATDT 79
++N+G NT+ TDGS +F + ++ G + ++GV + KDP A DT
Sbjct: 125 KSNNGVMNTLATDGSAKNFNFTVQNEGDKVTIKTDASDGVARIKDTVYDKDPIAIYAVDT 184
Query: 80 VKETIYTAGPRGFRAKGP 97
V E + P A P
Sbjct: 185 VLEPVELFEPAESPAPAP 202
>03_05_0370 + 23541188-23542537
Length = 449
Score = 28.7 bits (61), Expect = 8.6
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 163 RHDVSYIAGRDTGFHVSSAHPDNPG--VIGSPFHRAPLVRGETKARGRTAVQRGL 215
R ++ + G H+ P+NPG V+ S FH A E+ R + +GL
Sbjct: 382 RANMDVVRGNKVALHLLEVDPENPGSHVLISNFHAAARQWFESDESRRIIIDKGL 436
>02_04_0056 +
19313422-19313967,19314035-19314168,19314263-19314398,
19314870-19314923,19314995-19315135,19315220-19315546,
19315647-19315916,19316080-19316226,19316890-19317045,
19317223-19317290,19318210-19318309,19318696-19318985,
19319074-19319274,19319840-19319902,19320263-19320356,
19320964-19321035,19321979-19322077,19322254-19322376
Length = 1006
Score = 28.7 bits (61), Expect = 8.6
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 326 HVKPPPFQVSESEIPEGPAGPITSAETDNAPNLQTDGGYSQPAFSQSGNEDLGYVDEDAG 385
H PPP S S P PAG T ++ P +T S+PA + + E
Sbjct: 50 HGPPPPPPPSPSPSPSPPAGKPTKPHPESTPPTKTP-ARSKPAAAAAEKPRPSVAPESTN 108
Query: 386 YGG 388
GG
Sbjct: 109 GGG 111
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.136 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,055,432
Number of Sequences: 37544
Number of extensions: 688784
Number of successful extensions: 1179
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1173
Number of HSP's gapped (non-prelim): 21
length of query: 398
length of database: 14,793,348
effective HSP length: 84
effective length of query: 314
effective length of database: 11,639,652
effective search space: 3654850728
effective search space used: 3654850728
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 61 (28.7 bits)
- SilkBase 1999-2023 -