Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000225-TA|BGIBMGA000225-PA|undefined
         (124 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y07759-2|CAA69036.1| 1828|Homo sapiens mysoin heavy chain 12 pro...    29   5.6  
Y07759-1|CAA69035.1| 1855|Homo sapiens mysoin heavy chain 12 pro...    29   5.6  
Z22957-1|CAA80533.1|  812|Homo sapiens myosin I homologue protein.     28   9.7  
U90942-1|AAD00702.1| 1855|Homo sapiens myosin heavy chain 12 pro...    28   9.7  
AY635582-1|AAT48654.1|  617|Homo sapiens glucuronyl C5-epimerase...    28   9.7  
AB209505-1|BAD92742.1| 1409|Homo sapiens Myosin Va variant protein.    28   9.7  
AB209487-1|BAD92724.1| 1409|Homo sapiens Myosin Va variant protein.    28   9.7  
AB073386-1|BAD38637.1|  446|Homo sapiens putative protein produc...    28   9.7  
AB020643-1|BAA74859.1|  609|Homo sapiens KIAA0836 protein protein.     28   9.7  

>Y07759-2|CAA69036.1| 1828|Homo sapiens mysoin heavy chain 12
           protein.
          Length = 1828

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 28  KRNKREVPFTHDEKRIAGCLLQCVYRKVKAVDGFGFPT 65
           K N  ++PFT DEKR    L  C   +   +   GFP+
Sbjct: 662 KPNDFKLPFTFDEKRAVQQLRACGVLETIRISAAGFPS 699


>Y07759-1|CAA69035.1| 1855|Homo sapiens mysoin heavy chain 12
           protein.
          Length = 1855

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 28  KRNKREVPFTHDEKRIAGCLLQCVYRKVKAVDGFGFPT 65
           K N  ++PFT DEKR    L  C   +   +   GFP+
Sbjct: 662 KPNDFKLPFTFDEKRAVQQLRACGVLETIRISAAGFPS 699


>Z22957-1|CAA80533.1|  812|Homo sapiens myosin I homologue
          protein.
          Length = 812

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 28 KRNKREVPFTHDEKRIAGCLLQCVYRKVKAVDGFGFPT 65
          K N  + PFT DEKR    L  C   +   +   GFP+
Sbjct: 25 KPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPS 62


>U90942-1|AAD00702.1| 1855|Homo sapiens myosin heavy chain 12
           protein.
          Length = 1855

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 28  KRNKREVPFTHDEKRIAGCLLQCVYRKVKAVDGFGFPT 65
           K N  + PFT DEKR    L  C   +   +   GFP+
Sbjct: 662 KPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPS 699


>AY635582-1|AAT48654.1|  617|Homo sapiens glucuronyl C5-epimerase
           protein.
          Length = 617

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 7/51 (13%)

Query: 12  EALD-VIKEEHTMPAERKRNKREVPFTHDEKRIAGCLLQCVYRKVKAVDGF 61
           E +D +I +EHT+   R+ N+  +PFT  EK         VY KV   DG+
Sbjct: 105 EEIDCLINDEHTIKGRREGNEVFLPFTWVEKYFD------VYGKVVQYDGY 149


>AB209505-1|BAD92742.1| 1409|Homo sapiens Myosin Va variant protein.
          Length = 1409

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 28  KRNKREVPFTHDEKRIAGCLLQCVYRKVKAVDGFGFPT 65
           K N  + PFT DEKR    L  C   +   +   GFP+
Sbjct: 243 KPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPS 280


>AB209487-1|BAD92724.1| 1409|Homo sapiens Myosin Va variant protein.
          Length = 1409

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 28  KRNKREVPFTHDEKRIAGCLLQCVYRKVKAVDGFGFPT 65
           K N  + PFT DEKR    L  C   +   +   GFP+
Sbjct: 243 KPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPS 280


>AB073386-1|BAD38637.1|  446|Homo sapiens putative protein product
           of HMFN1864 protein.
          Length = 446

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)

Query: 12  EALDVIKEEHTMPAERKRNKREVPFTHDEKRIAGCLLQCVYRKVKAVDGF 61
           +ALD+  +E + P E+K +++ +   H   R     L  V RKV  + GF
Sbjct: 386 KALDIDSDEESEPKEQKSDEK-IVIHHKPLRSTWSQLSAVKRKVILIVGF 434


>AB020643-1|BAA74859.1|  609|Homo sapiens KIAA0836 protein protein.
          Length = 609

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 7/51 (13%)

Query: 12  EALD-VIKEEHTMPAERKRNKREVPFTHDEKRIAGCLLQCVYRKVKAVDGF 61
           E +D +I +EHT+   R+ N+  +PFT  EK         VY KV   DG+
Sbjct: 97  EEIDCLINDEHTIKGRREGNEVFLPFTWVEKYFD------VYGKVVQYDGY 141


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.322    0.137    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,393,121
Number of Sequences: 224733
Number of extensions: 639670
Number of successful extensions: 1028
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1022
Number of HSP's gapped (non-prelim): 9
length of query: 124
length of database: 73,234,838
effective HSP length: 81
effective length of query: 43
effective length of database: 55,031,465
effective search space: 2366352995
effective search space used: 2366352995
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 59 (27.9 bits)