GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000225-TA|BGIBMGA000225-PA|undefined
         (124 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              25   0.19 
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    23   1.3  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   1.8  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    22   1.8  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   2.3  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    21   5.4  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    21   5.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          20   9.4  

>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 25.4 bits (53), Expect = 0.19
 Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 5/68 (7%)

Query: 21  HTMPAERKRNKREVPFTHDEK--RIAGCLLQCVYRKVKAVDGFGFPT--LEGLV-GLYSD 75
           H +   R  ++  +   ++E+  R  GC L C++++   ++G    T  + G++ G Y D
Sbjct: 43  HELKKLRDSSEARIKLINEEENFRNYGCFLACIWQQTGVMNGSELSTYNIAGIIEGQYHD 102

Query: 76  GVNERGYF 83
             + + +F
Sbjct: 103 DEDLKTFF 110


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding
          protein ASP4 protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 7/24 (29%), Positives = 15/24 (62%)

Query: 37 THDEKRIAGCLLQCVYRKVKAVDG 60
          + ++ +  GC   CV++K+  +DG
Sbjct: 45 SEEQMKKLGCFEACVFQKLHFMDG 68


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 58  VDGFGFPTLEGLVGLYSDGVNERGY 82
           ++GF F   +GL GL    +   GY
Sbjct: 228 INGFNFQWKDGLFGLSLSALQTDGY 252


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding
          protein ASP4 protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 7/24 (29%), Positives = 15/24 (62%)

Query: 37 THDEKRIAGCLLQCVYRKVKAVDG 60
          + ++ +  GC   CV++K+  +DG
Sbjct: 45 SEEQMKKFGCFEACVFQKLHFMDG 68


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 25  AERKRNKREVPFTHDE 40
           A+ +RN+R  P  HDE
Sbjct: 174 AQIRRNERRTPDPHDE 189


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding
          protein ASP2 protein.
          Length = 142

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 6/16 (37%), Positives = 11/16 (68%)

Query: 45 GCLLQCVYRKVKAVDG 60
          GCL  CV ++++ + G
Sbjct: 67 GCLKACVMKRIEMLKG 82


>AF166497-1|AAD51945.1|  142|Apis mellifera putative
          odorant-binding protein ASP2 protein.
          Length = 142

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 6/16 (37%), Positives = 11/16 (68%)

Query: 45 GCLLQCVYRKVKAVDG 60
          GCL  CV ++++ + G
Sbjct: 67 GCLKACVMKRIEMLKG 82


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 92  ECLMKNHDKFSRTTPMGNTTAMQSDLNNN 120
           E   +N +  + T    NT A  ++ NNN
Sbjct: 217 ETCQRNSNNSTITAGNANTNASNNNNNNN 245


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.137    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,326
Number of Sequences: 429
Number of extensions: 1433
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 124
length of database: 140,377
effective HSP length: 51
effective length of query: 73
effective length of database: 118,498
effective search space:  8650354
effective search space used:  8650354
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.0 bits)
S2: 39 (19.8 bits)