GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000224-TA|BGIBMGA000224-PA|IPR005828|General substrate
transporter, IPR007114|Major facilitator superfamily
         (322 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   4.0  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    21   9.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.1  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.1  

>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/28 (35%), Positives = 18/28 (64%)

Query: 272 LPETKGLTLREIEEYFKSGRSVRQSQTK 299
           L E  GL+ R+I+ +F++ R+  + Q K
Sbjct: 190 LAENLGLSERQIKIWFQNRRAKERKQNK 217


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query: 60  KDTEDKAKKSLTRFRGRDYD 79
           K+T +K  + LT+ R RD++
Sbjct: 82  KETAEKVIRHLTQKRARDWE 101


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query: 28  KWRILCYICGTYSVVMLIANF 48
           K R+LCY+   Y  + L+  F
Sbjct: 130 KKRLLCYLLARYVALALVILF 150


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query: 28  KWRILCYICGTYSVVMLIANF 48
           K R+LCY+   Y  + L+  F
Sbjct: 148 KKRLLCYLLARYVALALVILF 168


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.331    0.143    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,586
Number of Sequences: 317
Number of extensions: 2707
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 4
length of query: 322
length of database: 114,650
effective HSP length: 57
effective length of query: 265
effective length of database: 96,581
effective search space: 25593965
effective search space used: 25593965
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 43 (21.4 bits)