GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000224-TA|BGIBMGA000224-PA|IPR005828|General substrate
transporter, IPR007114|Major facilitator superfamily
         (322 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding pr...    24   6.6  
AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding pr...    24   6.6  

>AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP34 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 7/81 (8%)

Query: 189 LCFMAYMVFATFGYY-----TIP-FVVMCELFPLQVRXXXXXXXXXXFNILMFLATFCFP 242
           LC   Y  F  +  Y       P FVV   L  LQV            + L  LA  CFP
Sbjct: 135 LCTQVYKAFQCYYQYYGALSECPQFVVNSYLEDLQVAYDLFGMLAVSQSTLQSLAGGCFP 194

Query: 243 YLRDSLGFAFT-VLMFGIISL 262
              +SL F ++ V   G+ S+
Sbjct: 195 SGEESLCFFYSFVTRSGLYSV 215


>AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP37 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 7/81 (8%)

Query: 189 LCFMAYMVFATFGYY-----TIP-FVVMCELFPLQVRXXXXXXXXXXFNILMFLATFCFP 242
           LC   Y  F  +  Y       P FVV   L  LQV            + L  LA  CFP
Sbjct: 135 LCTQVYKAFQCYYQYYGALSECPQFVVNSYLEDLQVAYDLFGMLAVSQSTLQSLAGGCFP 194

Query: 243 YLRDSLGFAFT-VLMFGIISL 262
              +SL F ++ V   G+ S+
Sbjct: 195 SGEESLCFFYSFVTRSGLYSV 215


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.331    0.143    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 278,188
Number of Sequences: 2123
Number of extensions: 10161
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 18
Number of HSP's gapped (non-prelim): 2
length of query: 322
length of database: 516,269
effective HSP length: 64
effective length of query: 258
effective length of database: 380,397
effective search space: 98142426
effective search space used: 98142426
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 48 (23.4 bits)