GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000224-TA|BGIBMGA000224-PA|IPR005828|General substrate
transporter, IPR007114|Major facilitator superfamily
         (322 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    25   1.2  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   2.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   4.7  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 194 YMVFATFGYYTIPFVVMCELF 214
           Y ++AT G + IP  VM +++
Sbjct: 202 YQIYATLGSFYIPLFVMIQVY 222


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/17 (52%), Positives = 14/17 (82%)

Query: 42  VMLIANFFLPETPYFVL 58
           V++IA FF+  TPY+V+
Sbjct: 263 VIIIAVFFICWTPYYVM 279


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)

Query: 246 DSLGFAFTVLMFGIISLLSAVFLYYF 271
           DS     T++ + I+  LSAVF+ +F
Sbjct: 561 DSSTSGATIVNYSIMIFLSAVFISFF 586


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.331    0.143    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,847
Number of Sequences: 429
Number of extensions: 3060
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 3
length of query: 322
length of database: 140,377
effective HSP length: 58
effective length of query: 264
effective length of database: 115,495
effective search space: 30490680
effective search space used: 30490680
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 44 (21.8 bits)