GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000223-TA|BGIBMGA000223-PA|IPR005829|Sugar transporter
superfamily, IPR005828|General substrate transporter, IPR007114|Major
facilitator superfamily
         (455 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    24   1.9  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   7.8  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 318 YLYFLEGWKQNNVTPSYTWIPVGCIYLFMV 347
           + Y L     NN    Y W+ V C+ L +V
Sbjct: 39  WYYLLTNLTYNNTNRKYYWLNVCCLNLSIV 68


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 12/52 (23%), Positives = 25/52 (48%)

Query: 387 SVVKTYPLLAKLIGQYGIFSLYGAMSLFGILYFYFFLPETKGKNLQDIEDYF 438
           ++++  PLLA  +G+        A+ +  ++   F + E    NL+ + D F
Sbjct: 424 AIIEYMPLLAGQLGREFFDEKLNALCMTWLMDHVFAIREAATLNLRKLVDQF 475


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.325    0.139    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,747
Number of Sequences: 317
Number of extensions: 4630
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 2
length of query: 455
length of database: 114,650
effective HSP length: 59
effective length of query: 396
effective length of database: 95,947
effective search space: 37995012
effective search space used: 37995012
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)