Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000223-TA|BGIBMGA000223-PA|IPR005829|Sugar transporter
superfamily, IPR005828|General substrate transporter, IPR007114|Major
facilitator superfamily
(455 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0) 192 5e-49
SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0) 95 1e-19
SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28) 64 2e-10
SB_47688| Best HMM Match : ATP_synt_H (HMM E-Value=7) 50 4e-06
SB_31847| Best HMM Match : Sugar_tr (HMM E-Value=4.6e-05) 47 3e-05
SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03) 47 3e-05
SB_28947| Best HMM Match : Sugar_tr (HMM E-Value=2.1e-06) 44 3e-04
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 37 0.039
SB_20394| Best HMM Match : SbmA_BacA (HMM E-Value=6.2) 35 0.12
SB_14846| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.27
SB_14272| Best HMM Match : Sugar_tr (HMM E-Value=0.0046) 33 0.36
SB_57462| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.48
SB_57349| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.48
SB_31598| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.48
SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011) 32 1.1
SB_19714| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.1
SB_53828| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_31764| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.5
SB_896| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.4
SB_51145| Best HMM Match : RCSD (HMM E-Value=1.3) 30 4.4
SB_4779| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.4
SB_54782| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_35181| Best HMM Match : Tetraspannin (HMM E-Value=0.49) 29 7.7
SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034) 29 7.7
>SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 512
Score = 192 bits (468), Expect = 5e-49
Identities = 114/371 (30%), Positives = 184/371 (49%), Gaps = 23/371 (6%)
Query: 89 WIGRLLVGFGSGMVGAPARVYTCEVSQPHLRGMLGALASVGVSTGVLIVYVIGSITSWNI 148
+IGR + G GMV VY E+S P LRGMLG++ + V+ G+L+ Y +G + W
Sbjct: 142 YIGRFITGLAVGMVSLTVPVYIAEISSPSLRGMLGSVNQLAVTMGLLLAYSMGVVLKWRW 201
Query: 149 LAGVCASVPXXXXXXXXFLPETPNFLLQQGRRERAESSLAKLRGSTCNLQEEIDKMIAFK 208
LA A P F+PETP + L RR A ++ RG +++EE ++ A
Sbjct: 202 LACSGAIFPALLVVLMFFVPETPRWSLSHKRRRDALDAMMWFRGPEADVEEECYRIEA-- 259
Query: 209 EKNHVEPLKSAREVIKALCSPSALKPFTILAIYFFVYQWCGINSITSYSVHIFKATGNEA 268
++ + + A C P+ +KP I F Q+CGIN+I S IF G +
Sbjct: 260 TMDNTQSMSCAE-----FCRPAIMKPLFISIALMFFQQFCGINAILFNSASIFHQAGFQD 314
Query: 269 HKNALTIALGVVRVAFTIVGCIMCRRYGRRPLTFVSAAGCGITMLILGVY--LYFLEGWK 326
K A+++ +G V+ T + C++ + GR+ L + +A G ++++ LG Y LY +
Sbjct: 315 SK-AVSVIIGAVQFVGTGIACLVVDKAGRKLLLWTTALGMTVSLIALGFYFELYIPTTQE 373
Query: 327 QNNVTPS-------------YTWIPVGCIYLFMVFCTVGYLIIPWVMIGEVYPTQVRGII 373
Q TP+ +W+ + I +F + + + +PW+++ E++P Q RGI
Sbjct: 374 QPTPTPALLESIHHSIPAGKISWLAITSIVVFNLVFALAWGPVPWLVMSEIFPLQARGIA 433
Query: 374 GGMTTCVAHMSVFSVVKTYPLLAKLIGQYGIFSLYGAMSLFGILYFYFFLPETKGKNLQD 433
++T F+V KT+ + I G + YG +S G L+ F+PETKGK L+
Sbjct: 434 SSISTLCNWSLAFAVTKTFVNIEDAITIQGTYWFYGGLSFLGFLFVLMFVPETKGKTLEQ 493
Query: 434 IEDYFSGRTKT 444
IE F G T
Sbjct: 494 IERLFDGTLVT 504
Score = 38.7 bits (86), Expect = 0.010
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 38 GRGKALKQVFASFLANLGTINTGMAFGFSAVALPQL-QNPNSTLFISEDQASWIGRLLVG 96
G+ + + V A+F+A LG ++ G G+S+ AL L ++ ++ Q SW LV
Sbjct: 37 GKDRVGRMVLATFIAALGPLSFGFCLGYSSSALEDLIAESKESVKLTVSQGSWFSS-LVT 95
Query: 97 FGSGMVGAPARVYTCE 112
G+ ++GAP +T E
Sbjct: 96 LGA-ILGAPLGGWTLE 110
>SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 493
Score = 94.7 bits (225), Expect = 1e-19
Identities = 63/239 (26%), Positives = 111/239 (46%), Gaps = 11/239 (4%)
Query: 90 IGRLLVGFGSGMVGAPARVYTCEVSQPHLRGMLGALASVGVSTGVLIVYVIGSI------ 143
+GRL++G G G +Y E + +RG L L ++ ++ G I V+ I
Sbjct: 145 VGRLVIGLGIGGASMTVPIYVAEAAPSSMRGKLVTLNNLFITGGQFIASVVDGIFAYDRQ 204
Query: 144 TSWNILAGVCASVPXXXXXXXXFLPETPNFLLQQGRRERAESSLAKLRGSTCNLQEEIDK 203
W + G+ A LPE+P +L+ + + A ++L K+RG T ++ E++
Sbjct: 205 NGWRFMLGLAAVPSIIMFFGCVILPESPRWLISKCKYAEARAALCKIRGRT-DVDRELEA 263
Query: 204 MIAFKEKNHVEPLKSAREVIKALCSPSALKPFTILAIYFFVYQWCGINSITSYSVHIFKA 263
+ + E +S + +I+ L P+ + + + + Q CGIN++ YS I
Sbjct: 264 VRRTCKVERKE--RSGQVLIRILRFPNTRRALLVGCMLQAIQQLCGINTVMYYSATIILM 321
Query: 264 TGNEAHKNALTIALGVV--RVAFTIVGCIMCRRYGRRPLTFVSAAGCGITMLILGVYLY 320
+G K ++ +A + FTIVG + R GRR L S AG +++ +LG Y
Sbjct: 322 SGIGNSKTSIWLAAAIAFGNTLFTIVGIFLVERIGRRKLLLGSLAGVILSLFLLGGAFY 380
>SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28)
Length = 456
Score = 64.5 bits (150), Expect = 2e-10
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 91 GRLLVGFGSGMVGAPARVYTCEVSQPHLRGMLGALASVGVSTGVLIVYVIGSITSWNILA 150
GR + G G GM VY E + RG +G++ +G++ G+LI Y IG W +
Sbjct: 140 GRFMSGLGVGMASLNVPVYISETASFSNRGAMGSINQLGITAGILISYAIGYAFDWR-WS 198
Query: 151 GVCASVPXX-XXXXXXFLPETPNFLLQQGRRERAESSLAKLRGSTCNLQEEI 201
V S P F+PET +L+ + + RA +L LRG ++ +E+
Sbjct: 199 AVAGSFPAALLVVLMAFMPETARWLIAKKKETRARKTLLWLRGPDYDIDKEL 250
Score = 53.6 bits (123), Expect = 3e-07
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 217 KSAREVIKALCSPSALKPFTILAIYFFVYQWCGINSITSYSVHIFKATGNEAHKNALTIA 276
++ R +K +PS L+PF I F Q+ GIN+ Y IF+ G + + I
Sbjct: 324 QNQRFSLKEFKNPSLLRPFLISMSLHFFQQFSGINAFMFYCATIFQKAGFK-DPTGVPIL 382
Query: 277 LGVVRVAFTIVGCIMCRRYGRRPLTFVSAAGCGITMLILGVYLYFLEGWKQNNVTPSYTW 336
+G V+ + + + R GRR L V+ G I+ VY + + V W
Sbjct: 383 IGAVQFVASAISLALIDRGGRRFLLIVAGVGMSISCFTCAVYFFITVNFGMTEV--DIAW 440
Query: 337 IPVGCIYLFMV 347
+ V + +++V
Sbjct: 441 LSVTSVAVYIV 451
Score = 48.0 bits (109), Expect = 2e-05
Identities = 24/67 (35%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 48 ASFLANLGTINTGMAFGFSAVALPQLQNPNST-LFISEDQASWIGRLLVGFGSGMVGAPA 106
A+F+A LG ++ G G+S+ A QL+N N+T L+++ D+ +W G LL G+ M+G P
Sbjct: 43 ATFIAALGPLSFGYCMGYSSAATTQLENKNATDLYLNADEITWFGSLL-NIGA-MLGGPI 100
Query: 107 RVYTCEV 113
+ + ++
Sbjct: 101 QGFLIDL 107
>SB_47688| Best HMM Match : ATP_synt_H (HMM E-Value=7)
Length = 124
Score = 50.0 bits (114), Expect = 4e-06
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 358 WVMIGEVYPTQVRGIIGGMTTCVAHMSVFSVVKTYPLLAKLIGQYGIFSLYGAMSLFGIL 417
W+++ E++P+ ++G + T + + V T+ L IG G F YG + + I+
Sbjct: 3 WLLLSEIFPSGIKGRAFSLATVLNWGTNVFVSFTFLDLLGSIGTSGTFFFYGLICVIAIV 62
Query: 418 YFYFFLPETKGKNLQDIE-DYFSGRTKTL 445
+ Y ++PETK K L+ I + S + K+L
Sbjct: 63 FIYKYVPETKNKTLEQISAELNSKKAKSL 91
>SB_31847| Best HMM Match : Sugar_tr (HMM E-Value=4.6e-05)
Length = 549
Score = 47.2 bits (107), Expect = 3e-05
Identities = 69/298 (23%), Positives = 127/298 (42%), Gaps = 34/298 (11%)
Query: 91 GRLLVGFGSGMVG-------APARVYTCEVSQPHLRGMLGALASVGVSTGVLIVYVIGSI 143
G +L+GF MVG Y E+S R M+G++ + +L+ +I +
Sbjct: 111 GYILLGFLEFMVGFFLVSALLSEFTYVIELSATKRRTMIGSVVEIFWPVCLLLHTLIAFL 170
Query: 144 T-SW-NILAGVCASVPXXXXXXX-XFLPETPNFLLQQGRRERAESSLAKLRGSTCNLQEE 200
W N+L V S+P ++PE+P +L+ +GR + A++ L + S Q+
Sbjct: 171 VHEWRNLLLAV--SIPGFVFVCFWRYIPESPRWLVTRGRLDEAQAVLNRFGSSNPIDQQA 228
Query: 201 IDKMIAFKEKNHVEPLKSARE--VIKALCSPSALKPFTILAIYFFVYQWCGINSITSYSV 258
+ +I ++ +E + A+ +I +P K ++ +F Q+ + + SV
Sbjct: 229 LRGLIESIRESQIETERKAKRYTLIDLYRTPKMRKWALVMGFNWFTVQFSDMGFMLFLSV 288
Query: 259 HIFKATGNEAHKNALTIALGVVRVAFTIVGCIMCRRYGRRPLTFVSAAGCGITMLILGVY 318
G+ A+ A VV + IV +M +++GRRP+ G+ L+L
Sbjct: 289 ----LPGSVYVNQAIPYATQVVLI--PIVWVLM-QKFGRRPIHVTVLLVPGVMFLVL--- 338
Query: 319 LYFLEGWKQNNVTPSYTWIPVGCIYLFMVFCTVGYLIIPWVMIGEVYPTQVRGIIGGM 376
+ EG Y + G + +L I +++ EV+PT +R GM
Sbjct: 339 MAIPEG---------YPMLSAGLALTSKSILNIAWLTI-YLIGSEVFPTTIRSTALGM 386
>SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03)
Length = 201
Score = 47.2 bits (107), Expect = 3e-05
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 90 IGRLLVGFGSGMVGAPARVYTCEVSQPHLRGMLGALASVGVSTGVLIVYVIG 141
+GR ++G GM A A +Y E++ HLRG LG L G+ +G+L+ ++ G
Sbjct: 48 VGRFVIGINCGMNTAIAPIYLSELAPIHLRGSLGTLNQFGIVSGLLVGFIFG 99
Score = 40.3 bits (90), Expect = 0.003
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 365 YPTQVRGIIGGMTTCVAHMSVFSVVKTYPLLAKLIGQYGIFSLYGAMSLFGILYFYFFLP 424
Y T + +G + VA + V + +A + Y +++F F FF+P
Sbjct: 106 YSTSIFEKVGVPESRVATTGIGVVALVFTAIAVALYPYTFIVFMALVAIFWTFTF-FFVP 164
Query: 425 ETKGKNLQDIEDYFSG 440
ETKG+ ++DI D+F G
Sbjct: 165 ETKGRTIEDITDHFRG 180
>SB_28947| Best HMM Match : Sugar_tr (HMM E-Value=2.1e-06)
Length = 624
Score = 43.6 bits (98), Expect = 3e-04
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 20/237 (8%)
Query: 92 RLLVGFGSGMVGAPARVYTCEVSQPHLRGMLGALASVGVSTGVLIVYVIGS-ITSWNILA 150
R +GF + +Y E+ P R M G ++ V S G + +IG + W L
Sbjct: 114 RFCIGFSLASFMLSSYIYMIELIGPQYRTMGGQISHVFYSPGYCLTALIGYFVRDWRYLN 173
Query: 151 GVCASVPXXXXXXXXFLPETPNFLLQQGRRERAESSLAKLRGSTCNLQEEIDKMIAFKE- 209
C +P PE+ +L+ R + A L++ GS + +D ++A KE
Sbjct: 174 MTCCLLPAFFFLTWKVFPESARWLIANNRLDEALQVLSRY-GSRSG-SDPVD-LVALKEG 230
Query: 210 -----KNHVEPLKSAR--EVIKALCSPSALKPFTILAIYFFVYQWCGINSITSYSVHIFK 262
++ +E + A+ ++ L + K ILA +FV + +++
Sbjct: 231 IKDIRRDQIEREQHAKRTSILDLLRTRKLRKRTLILAFNWFVVALVHF----GFYLYVTS 286
Query: 263 ATGNEAHKNALTIALGVVRVAFTIVGCIMCRRYGRR-PLTFVSAAGCGITMLILGVY 318
GN + N + + + + + RYGRR P + + ++LIL V+
Sbjct: 287 LAGN-VYVN--FVIMNSIYIPHLFFCWFLMHRYGRRFPYSSYMLSAGAASLLILAVF 340
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 36.7 bits (81), Expect = 0.039
Identities = 53/229 (23%), Positives = 91/229 (39%), Gaps = 19/229 (8%)
Query: 98 GSGMVGAPARVYT--CEVSQPHLRGMLGALASVGVSTG-VLIVYVIGSITSWNILAGVCA 154
G+ + G +YT E+ P R + G V + G +IV + I W +
Sbjct: 749 GATLTGTMLSIYTYGMEIIGPDKRTLAGNANEVFWTVGNTMIVVIAYFIRDWRWYMRISG 808
Query: 155 SVPXXXXXXXXFLPETPNFLLQQGRRERAESSLAKLRGSTCNLQ----EEIDKMIAFKEK 210
LPETP +L+ GR E A L K GS N + E + +I +
Sbjct: 809 LPSILFLVFWRLLPETPRWLIAHGRLEEARDVLIKY-GSCSNTKSLDPEMLGNLIHEIRE 867
Query: 211 NHVEPLKSARE---VIKALCSPSALKPFTILAIYFFVYQWCGINSITSYSVHIFKATGN- 266
N + + + ++ +P K IL +FV G++S + +++ G+
Sbjct: 868 NQLHRARKRGKGFTILDLFRTPKMRKWTLILGFNWFV---IGLSSF-GFVLYVTALAGDL 923
Query: 267 EAHKNALTIALGVVRVAFTIVGCIMCRRYGRRPLTFVSAAGCGITMLIL 315
+ + L I L V++A + R+GRR F G+ L++
Sbjct: 924 YLNFSLLQIVLPTVQIAPV---WFILHRFGRRIPHFCILLLAGLVCLLI 969
>SB_20394| Best HMM Match : SbmA_BacA (HMM E-Value=6.2)
Length = 215
Score = 35.1 bits (77), Expect = 0.12
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
Query: 92 RLLVGFGSGMVGAPARVYTCEVSQPHLRGMLGALASVGVS-TGVLIVYVIGSITSWNILA 150
+L VGFG VY E+ P R + G + + +G+L + + I W +
Sbjct: 59 QLCVGFGQMGTTLALFVYGIELVGPTWRTLAGNINNYYWELSGLLGILLAYYIRDWRTMI 118
Query: 151 GVCASVPXXXXXXXXFLPETPNFLLQQGRRERAESSLAKLRGSTCNLQEEIDKMIAFKEK 210
VC++ PE+ FL+ +GR E A L K N + KM E+
Sbjct: 119 RVCSTPIFLLFIFIRVFPESSRFLVTKGRIEDALKVLIKYGPKHNNNAVDAGKMTEMLEE 178
>SB_14846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 33.9 bits (74), Expect = 0.27
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Query: 93 LLVGFGSGMVGAPARVYTCEVSQPHLRGMLGALASVGVS-TGVLIVYVIGSITSWNILAG 151
L VGFG VY E+ P R + G + + +G+L + + I W +
Sbjct: 1 LCVGFGQMGTTLALFVYGIELVGPTWRTLAGNINNYYWELSGLLGILLAYYIRDWRTMIR 60
Query: 152 VCASVPXXXXXXXXFLPETPNFLLQQGRRERAESSLAK 189
VC++ PE+ FL+ +GR E A L K
Sbjct: 61 VCSTPIFLLFIFIRVFPESSRFLVTKGRIEDALKVLIK 98
>SB_14272| Best HMM Match : Sugar_tr (HMM E-Value=0.0046)
Length = 775
Score = 33.5 bits (73), Expect = 0.36
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 9/103 (8%)
Query: 92 RLLVGFGSGMVGAPARVYTCEVSQPHLRGMLGALASV----GVSTGVLIVYVIGSITSWN 147
R ++GF ++ VY E+ P R + G L S+ G ST + + I W
Sbjct: 246 RFVIGFFQMVLNVTYFVYAIEILGPKYRTLGGQLCSLFWLFGYSTTAVFAFF---IRDWR 302
Query: 148 ILAGVCASVPXXXXXXX-XFLPETPNFLLQQGRRERAESSLAK 189
+L V S+P P +P +L+ R + A S L K
Sbjct: 303 MLI-VAVSIPGLLFVLLWKIFPASPRWLIAHNRLDEAHSILLK 344
>SB_57462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 33.1 bits (72), Expect = 0.48
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 17/99 (17%)
Query: 344 LFMVFCTVGYLIIP------WVMIGEVYPTQVRGI-IGGMTTC--VAHMSVFSVVKTYPL 394
L M F +G I ++ E+YPT +R I +G + C V M V + PL
Sbjct: 9 LVMTFALIGKFTISAAYYQIYIHSAELYPTVIRTIGVGFASLCARVGAMGAPYVADSTPL 68
Query: 395 LAKLIGQYGIFSLYGAMSLFGILYFYFFLPETKGKNLQD 433
+A I ++G +S+ + FFLPET+G L D
Sbjct: 69 IAPAI-------IFGGLSMTAGMVT-FFLPETRGMPLPD 99
>SB_57349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 33.1 bits (72), Expect = 0.48
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 9/110 (8%)
Query: 98 GSGMVGAPARVYT--CEVSQPHLRGMLGALASV----GVSTGVLIVYVIGSITSWNILAG 151
G GM+ ++T E+ P R M G L + G G+L+ Y I W L
Sbjct: 94 GLGMMSFMLSLFTFGVEIVGPSWRTMAGNLNGMYWASGAFLGILLAYYI---RDWQTLTR 150
Query: 152 VCASVPXXXXXXXXFLPETPNFLLQQGRRERAESSLAKLRGSTCNLQEEI 201
+ + P++P +LL +GR E + + L K G + E+
Sbjct: 151 ISVAPMFLFLFFVKAYPDSPRYLLVKGRVEDSMNILMKFGGKGVQPKPEV 200
>SB_31598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 884
Score = 33.1 bits (72), Expect = 0.48
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 244 VYQWCGINSITSYSVHIFKATGNEAHKNALTIALGVVRVAFTIVGCIMCRRYGRR 298
+ ++C +N+I+ +V IF T +E TIA G+ R F I ++ R Y RR
Sbjct: 192 ILEYCKLNNISDPNVIIFSMTKDERKDFYRTIAKGIKRPLFAIYRRVL-RMYDRR 245
>SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011)
Length = 468
Score = 31.9 bits (69), Expect = 1.1
Identities = 31/127 (24%), Positives = 47/127 (37%), Gaps = 2/127 (1%)
Query: 92 RLLVGFGSGMVGAPARVYTCEVSQPHLRGMLGALASVGVSTGVLIVYVIGS-ITSWNILA 150
R VGF V VY E+ P R M G + G ++ + I W +L
Sbjct: 172 RFGVGFALASVMVCQYVYVIELVGPKARTMSGKVQDFFWDLGDVLSFTCAYFIREWRMLI 231
Query: 151 GVCASVPXXXXXXXXFLPETPNFLLQQGRRERAESSLAKLRGSTCNLQEEIDKMIAFKEK 210
P+T +L+ QGR+++A L K G L + D A E
Sbjct: 232 LCVTLFFVPFFFFWRVFPDTACWLIAQGRQDKARELLMKYGGKKKKLLDS-DNATAMIES 290
Query: 211 NHVEPLK 217
+ E ++
Sbjct: 291 IYNEEMR 297
>SB_19714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 31.9 bits (69), Expect = 1.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 417 LYFYFFLPETKGKNLQDIEDYFSG 440
L+ YF +PETKG+++ DI F G
Sbjct: 20 LFTYFLVPETKGRSIDDITRQFRG 43
>SB_53828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 444
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 166 FLPETPNFLLQQGRRERAESSLAKLRGSTCNLQEE 200
F E FLL++ R +A + + KL+G C+L EE
Sbjct: 313 FKREQEQFLLEEQRMSKALNEVGKLQGRVCSLVEE 347
>SB_31764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 363 EVYPTQVRGIIGGMTTCVAHMSVFSVVKTYPLLAK--LIGQYGIFSLYGAMSLFGILYFY 420
++Y + + II G+ T ++ + +V Y L+ L+ YG+ + YG ++ +G++ +Y
Sbjct: 90 DLYRWRNQIIIWGLVTYYGLVTYYGLVTYYGLVTYYGLVTYYGLVTYYGLVTYYGLVTYY 149
>SB_896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 968
Score = 30.3 bits (65), Expect = 3.4
Identities = 25/99 (25%), Positives = 36/99 (36%), Gaps = 1/99 (1%)
Query: 92 RLLVGFGSGMVGAPARVYTCEVSQPHLRGMLGALASVGVSTGVLIVYVIGS-ITSWNILA 150
R VGF V VY E+ P R M G + G ++ + I W +L
Sbjct: 685 RFGVGFALASVMVCQYVYVIELVGPKARTMSGKVQDFFWDLGDILSFTCAYFIREWRMLI 744
Query: 151 GVCASVPXXXXXXXXFLPETPNFLLQQGRRERAESSLAK 189
P+T +L+ QGR++ A L K
Sbjct: 745 LCVTLFFVPFFFFWRVFPDTARWLITQGRQDEARELLMK 783
>SB_51145| Best HMM Match : RCSD (HMM E-Value=1.3)
Length = 248
Score = 29.9 bits (64), Expect = 4.4
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 358 WVMIGEVYPTQVRGIIGGMTTCVAHMSVFSVVKTYPLLAKLIGQYGIFSLYGAMSLFGIL 417
+V E++PT VR G+ + ++ + + + + + I F+L G ++ L
Sbjct: 25 YVFSAELFPTMVRNSGMGLLSVISRVG--AALAPFVVQLTRINAILPFALMGGLTFLAAL 82
Query: 418 YFYFFLPETKGK 429
+F LPET+GK
Sbjct: 83 ACWF-LPETRGK 93
>SB_4779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 29.9 bits (64), Expect = 4.4
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 70 LPQLQNPNSTLFISEDQASWIGRL--LVGFGSGMV 102
LP Q P +T +S+ + W GRL +VG G+G+V
Sbjct: 129 LPLRQAPAATRKVSDSRGRWAGRLVDVVGAGAGVV 163
>SB_54782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 29.5 bits (63), Expect = 5.9
Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Query: 271 NALTIALGVVRVAFTIVGCIMCR--RYGRRPLTFVSAAGCGITMLILGVYLYFLEGWKQN 328
+ ++ +L + V+F +V C R ++ G + +LG LY + WK +
Sbjct: 140 SGISESLWICIVSFAVVPCAFVRTMKHISHISILTVIVSMGSSTCVLGYSLYHHDDWKTH 199
Query: 329 NVTP-SYTWIPVGCIYLFMVFCTVGYLIIPWVMIGEVYPTQVRGIIGGMTTCV 380
N+T ++ + + + + F + YL P + YP + ++ T V
Sbjct: 200 NLTSFNFRHMSIAMGIVTVTFSSTAYL--PAIERSMKYPAEFNAMMNFTYTLV 250
>SB_35181| Best HMM Match : Tetraspannin (HMM E-Value=0.49)
Length = 230
Score = 29.1 bits (62), Expect = 7.7
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 318 YLYFLEGWKQNNVTPSYTWIPVGCIYLFMVFCTVGYLIIPWV 359
+L + WK+ ++ Y WIPV IY+ + + YL + +V
Sbjct: 119 FLLLMGTWKKIHLLV-YVWIPVSVIYILVDLSVIIYLGVTYV 159
>SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034)
Length = 363
Score = 29.1 bits (62), Expect = 7.7
Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 9/184 (4%)
Query: 46 VFASFLANLGTINTGMAFGFSAVALPQLQNPNSTLFISEDQASWIGRLLVGFGSGM--VG 103
+F SFL+ GT++ AFG + + + S I +++ F +G+
Sbjct: 160 LFGSFLS--GTVSD--AFGRKITLTVSVALQAAAFIGASFVTSHIALIILIFFAGLSLAS 215
Query: 104 APARVYTC--EVSQPHLRGMLGALASVGVSTG-VLIVYVIGSITSWNILAGVCASVPXXX 160
+ A YT E+ P R + G + + G +LI+ V I W + A+
Sbjct: 216 SIACQYTLIIEMIGPDHRTIAGIINELFWKAGWLLIILVAYFIRDWRTFMLIGAAPGLAI 275
Query: 161 XXXXXFLPETPNFLLQQGRRERAESSLAKLRGSTCNLQEEIDKMIAFKEKNHVEPLKSAR 220
++ E+P +LL +GR + A L G + + + + E+ +K
Sbjct: 276 LLFWKWIFESPRWLLTKGRLDEAHEILVNFGGKSKEQPLDKNSLRQLIERIRESQVKREG 335
Query: 221 EVIK 224
EV K
Sbjct: 336 EVTK 339
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.325 0.139 0.432
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,342,740
Number of Sequences: 59808
Number of extensions: 575279
Number of successful extensions: 1637
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1597
Number of HSP's gapped (non-prelim): 50
length of query: 455
length of database: 16,821,457
effective HSP length: 85
effective length of query: 370
effective length of database: 11,737,777
effective search space: 4342977490
effective search space used: 4342977490
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 62 (29.1 bits)
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