GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000223-TA|BGIBMGA000223-PA|IPR005829|Sugar transporter
superfamily, IPR005828|General substrate transporter, IPR007114|Major
facilitator superfamily
         (455 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    27   0.33 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   3.0  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   5.3  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   7.0  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   7.0  

>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 27.1 bits (57), Expect = 0.33
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%)

Query: 4   YGMVWNESAPFIKNGVPATI--TKKVLIEKCKPGKEGRGKAL 43
           Y   WNE  P +K G+P     T KV+      G+EG G +L
Sbjct: 573 YCAFWNEFLPKLK-GIPDPXPNTCKVIASSVSAGEEGLGNSL 613


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 293 RRYGRRPLTFVSAAGCGITMLILGVYLYFLEGWKQNNVTPSYTWIPVGCIYLFMVFCTVG 352
           +R  RR + +VS    G   + L   L        +   PS+  +     + + ++ T+G
Sbjct: 152 KRTPRRMIVYVSLVWLGAACISLPPLLIMGNEHTYSETGPSHCVVCQN--FFYQIYATLG 209

Query: 353 YLIIPWVMIGEVY 365
              IP  ++ +VY
Sbjct: 210 SFYIPLFVMIQVY 222



 Score = 22.6 bits (46), Expect = 7.0
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 118 LRGMLGALASVGVSTGVLIVYVIGSITSWNILAGVCASV 156
           L+G  G  +   V+  +LI  V+GSI    ++  +   V
Sbjct: 26  LQGFPGKNSPYTVTQAILIALVLGSIIVGTVIGNILVCV 64


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 350 TVGYLIIPWVMIGEVYPTQVRGI 372
           TVGY+II +++ G V P  +  I
Sbjct: 155 TVGYIIIGFLLAGIVQPFLIHWI 177


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 2/28 (7%)

Query: 353 YLIIPWVMIGEVYPTQVRGIIGGMTTCV 380
           Y+++P  +I  V    V G++G ++TCV
Sbjct: 51  YIVLPITVIYAVI--FVTGLVGNVSTCV 76


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 3/26 (11%)

Query: 308 CGITMLILGVYLYF---LEGWKQNNV 330
           CGI +L L +Y Y     + WK   V
Sbjct: 9   CGIAVLFLALYYYLTSTFDFWKSRGV 34


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.325    0.139    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,092
Number of Sequences: 429
Number of extensions: 5095
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 7
length of query: 455
length of database: 140,377
effective HSP length: 60
effective length of query: 395
effective length of database: 114,637
effective search space: 45281615
effective search space used: 45281615
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)