GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000222-TA|BGIBMGA000222-PA|IPR006603|Cystinosin/ERS1p
repeat, IPR005282|Lysosomal cystine transporter
         (566 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    25   1.4  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    23   4.3  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   5.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   5.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   5.7  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   7.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   7.5  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   9.9  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   9.9  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 11/49 (22%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 317 EYFSRHPRGLNPVQLNDVFFSLHAAFATLITI-TQCFLYEREEQRVSTV 364
           +++  +  G N   L DV+F+L  AF  ++ I    +L ++ + ++  +
Sbjct: 250 QFYYCYDSGFNSDNLTDVYFTLQWAFLQILEILALAYLCDKVQLKIGEI 298


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 8/33 (24%), Positives = 18/33 (54%)

Query: 468 LFSLVFDIFFILQHYVFYRNADKKYNLDVKSLI 500
           +F ++F +F  +Q YV+        N+D+  ++
Sbjct: 1   MFKVLFVVFACVQAYVYAEEYTVPQNIDIDEIL 33


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 3/61 (4%)

Query: 233 FVNLDTVYLRITVMHSNEINIISYIMGWIYFAAWSVSFYPQIYINFKRKSVVGLNFDFLA 292
           +VNL    L +   H     +I Y+  W  +      ++P+   N        +N+ FL 
Sbjct: 6   WVNLALFCLHVQHSHGATDKVICYVASWAIYRPDKGEYHPK---NIDPNICTHINYAFLG 62

Query: 293 L 293
           +
Sbjct: 63  V 63


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 42  PCKSSWPPHRTWSRLVAAVGLKRAPRY 68
           P     PP++  S+   ++GL R P Y
Sbjct: 139 PAHMGIPPYQLDSKTAGSMGLTRPPMY 165


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 42 PCKSSWPPHRTWSRLVAAVGLKRAPRY 68
          P     PP++  S+   ++GL R P Y
Sbjct: 31 PAHMGIPPYQLDSKTAGSMGLTRPPMY 57


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 275 YINFKRKSVVGLNFDFLALNIMG 297
           Y N+ +K +  L+F +   NI G
Sbjct: 3   YFNYSKKDIRSLSFFYKICNIFG 25


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 275 YINFKRKSVVGLNFDFLALNIMG 297
           Y N+ +K +  L+F +   NI G
Sbjct: 3   YFNYSKKDIRSLSFFYKICNIFG 25


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 10/31 (32%), Positives = 19/31 (61%)

Query: 89  PFSHLCWTKGKQITMAECSAVLRPRAAACSI 119
           PF++L ++ G +  + +  A+L  +AA C I
Sbjct: 438 PFAYLPFSAGPRNCIGKKFAMLELKAAICGI 468


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 10/31 (32%), Positives = 19/31 (61%)

Query: 89  PFSHLCWTKGKQITMAECSAVLRPRAAACSI 119
           PF++L ++ G +  + +  A+L  +AA C I
Sbjct: 438 PFAYLPFSAGPRNCIGKKFAMLELKAAICGI 468


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.325    0.139    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,902
Number of Sequences: 317
Number of extensions: 5927
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 9
length of query: 566
length of database: 114,650
effective HSP length: 60
effective length of query: 506
effective length of database: 95,630
effective search space: 48388780
effective search space used: 48388780
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)