Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000221-TA|BGIBMGA000221-PA|IPR006050|DNA photolyase,
N-terminal, IPR005101|DNA photolyase, FAD-binding, IPR006051|DNA
photolyase, FAD- binding N-terminal
(441 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q49AN0 Cluster: Cryptochrome-2; n=106; Eumetazoa|Rep: C... 444 e-123
UniRef50_Q52Z99 Cluster: 6-4 photolyase; n=4; Viridiplantae|Rep:... 426 e-118
UniRef50_Q7ZYX5 Cluster: Cry4 protein; n=13; Euteleostomi|Rep: C... 419 e-116
UniRef50_Q4SAM2 Cluster: Chromosome undetermined SCAF14682, whol... 404 e-111
UniRef50_A7P7Q6 Cluster: Chromosome chr9 scaffold_7, whole genom... 402 e-111
UniRef50_O48652 Cluster: 6-4 photolyase; n=3; Arabidopsis thalia... 402 e-110
UniRef50_A7S6B3 Cluster: Predicted protein; n=3; Nematostella ve... 334 3e-90
UniRef50_A2R6W6 Cluster: Cofactor: FAD; n=1; Aspergillus niger|R... 305 1e-81
UniRef50_Q019Z4 Cluster: Cryptochrome-like protein 1; n=4; Ostre... 276 1e-72
UniRef50_O77059 Cluster: CG3772-PA; n=15; Coelomata|Rep: CG3772-... 272 9e-72
UniRef50_A1CJL8 Cluster: DNA photolyase, putative; n=4; Pezizomy... 226 8e-58
UniRef50_Q4PCL9 Cluster: Putative uncharacterized protein; n=1; ... 226 1e-57
UniRef50_A4QZX5 Cluster: Putative uncharacterized protein; n=1; ... 181 4e-44
UniRef50_Q4T244 Cluster: Chromosome undetermined SCAF10345, whol... 177 4e-43
UniRef50_A5UYV1 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 173 6e-42
UniRef50_A7SYS9 Cluster: Predicted protein; n=1; Nematostella ve... 170 7e-41
UniRef50_Q3E438 Cluster: DNA photolyase, FAD-binding:DNA photoly... 169 1e-40
UniRef50_Q6HWS5 Cluster: Deoxyribodipyrimidine photolyase family... 168 3e-40
UniRef50_Q116U8 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 167 7e-40
UniRef50_A4M6R0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 166 1e-39
UniRef50_Q4KML2 Cluster: Cryptochrome DASH; n=11; cellular organ... 164 5e-39
UniRef50_Q4T243 Cluster: Chromosome undetermined SCAF10345, whol... 163 6e-39
UniRef50_Q41CV5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 163 8e-39
UniRef50_Q83CE4 Cluster: Deoxyribodipyrimidine photolyase-class ... 162 2e-38
UniRef50_Q12TR5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 162 2e-38
UniRef50_Q1RKC7 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;... 158 3e-37
UniRef50_Q4FL16 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 155 2e-36
UniRef50_Q46H89 Cluster: Deoxyribodipyrimidine photolyase; n=7; ... 154 4e-36
UniRef50_Q834P4 Cluster: Deoxyribodipyrimidine photolyase; n=14;... 153 7e-36
UniRef50_Q6FCZ9 Cluster: Deoxyribodipyrimidine photolyase (Photo... 153 1e-35
UniRef50_Q55081 Cluster: Deoxyribodipyrimidine photo-lyase; n=15... 152 2e-35
UniRef50_A1ZPZ8 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 151 3e-35
UniRef50_Q84KJ5 Cluster: Cryptochrome DASH, chloroplast/mitochon... 151 3e-35
UniRef50_Q3VTE5 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 149 2e-34
UniRef50_A7HMU7 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 146 1e-33
UniRef50_Q5FS98 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 145 2e-33
UniRef50_Q6ML17 Cluster: Deoxyribodipyrimidine photolyase-class ... 145 2e-33
UniRef50_Q1VSH4 Cluster: Deoxyribodipyrimidine photolyase-class ... 144 4e-33
UniRef50_P27526 Cluster: Deoxyribodipyrimidine photo-lyase; n=16... 144 4e-33
UniRef50_Q21MT8 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 143 9e-33
UniRef50_Q86RA1 Cluster: Photolyase related protein; n=1; Aphroc... 143 9e-33
UniRef50_Q1MZD6 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 142 1e-32
UniRef50_A7P504 Cluster: Chromosome chr4 scaffold_6, whole genom... 142 1e-32
UniRef50_Q04449 Cluster: Deoxyribodipyrimidine photo-lyase; n=13... 142 1e-32
UniRef50_A0M4X6 Cluster: Cryptochrome-like DNA photolyase family... 142 2e-32
UniRef50_A0L6R4 Cluster: Deoxyribodipyrimidine photo-lyase; n=4;... 142 2e-32
UniRef50_Q2S3C6 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 140 5e-32
UniRef50_Q8EBW1 Cluster: Deoxyribodipyrimidine photolyase; n=7; ... 140 7e-32
UniRef50_Q2JW81 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 140 7e-32
UniRef50_A3QCZ8 Cluster: Deoxyribodipyrimidine photo-lyase; n=9;... 139 1e-31
UniRef50_A4SQP9 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 138 3e-31
UniRef50_Q6MDF3 Cluster: Putative photolyase; n=1; Candidatus Pr... 137 5e-31
UniRef50_Q97VY1 Cluster: Deoxyribodipyrimidine photolyase (DNA p... 137 5e-31
UniRef50_Q6L055 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 137 5e-31
UniRef50_Q9HQ46 Cluster: Deoxyribodipyrimidine photo-lyase; n=5;... 137 5e-31
UniRef50_Q0APK4 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;... 137 6e-31
UniRef50_Q9KNA8 Cluster: Deoxyribodipyrimidine photo-lyase; n=25... 137 6e-31
UniRef50_Q11W86 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 136 1e-30
UniRef50_P57386 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 135 2e-30
UniRef50_UPI0000E87D35 Cluster: deoxyribodipyrimidine photo-lyas... 134 3e-30
UniRef50_Q0C191 Cluster: Deoxyribodipyrimidine photolyase family... 134 3e-30
UniRef50_A3D723 Cluster: Deoxyribodipyrimidine photo-lyase; n=8;... 134 3e-30
UniRef50_A4A8B3 Cluster: Deoxyribodipyrimidine photo-lyase; n=4;... 134 4e-30
UniRef50_Q39EN4 Cluster: Deoxyribodipyrimidine photolyase; n=42;... 134 6e-30
UniRef50_A2BUZ7 Cluster: Putative deoxyribodipyrimidine photolya... 133 8e-30
UniRef50_Q5ZYZ9 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 132 1e-29
UniRef50_A5GQG9 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 132 1e-29
UniRef50_Q2S3L9 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 131 3e-29
UniRef50_Q23DL8 Cluster: FAD binding domain of DNA photolyase fa... 130 7e-29
UniRef50_Q5NMI6 Cluster: DNA photolyase; n=1; Zymomonas mobilis|... 129 2e-28
UniRef50_Q0VRI4 Cluster: DNA photolyase; n=1; Alcanivorax borkum... 129 2e-28
UniRef50_A1WVH9 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 127 5e-28
UniRef50_A6WVR6 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 126 9e-28
UniRef50_A1KB68 Cluster: Deoxyribodipyrimidine photo-lyase; n=24... 126 9e-28
UniRef50_A0Q6Z2 Cluster: Deoxyribodipyrimidine photolyase; n=6; ... 126 9e-28
UniRef50_Q7UJB1 Cluster: Cryptochrome DASH; n=7; cellular organi... 126 1e-27
UniRef50_A4TUK0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 125 2e-27
UniRef50_A7D4K1 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 125 2e-27
UniRef50_A0Y3K3 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 122 1e-26
UniRef50_Q89AJ9 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 122 1e-26
UniRef50_Q0IDI4 Cluster: Deoxyribodipyrimidine photolyase; n=10;... 122 2e-26
UniRef50_A6VUF2 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 122 2e-26
UniRef50_A3JAL3 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 122 2e-26
UniRef50_Q0S6Q2 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;... 122 2e-26
UniRef50_Q6BZK7 Cluster: Similar to tr|O93963 Trichoderma harzia... 121 3e-26
UniRef50_Q5QV18 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 120 6e-26
UniRef50_A6EG08 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 120 8e-26
UniRef50_A3ETQ4 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 120 8e-26
UniRef50_Q5DZH3 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 120 1e-25
UniRef50_Q7M8M8 Cluster: DEOXYRIBODIPYRIMIDINE PHOTOLYASE DNA PH... 119 1e-25
UniRef50_P12768 Cluster: Deoxyribodipyrimidine photo-lyase; n=6;... 119 2e-25
UniRef50_P25078 Cluster: Deoxyribodipyrimidine photo-lyase; n=43... 118 3e-25
UniRef50_Q5IFN2 Cluster: Cryptochrome DASH, chloroplast/mitochon... 118 4e-25
UniRef50_Q9HVD2 Cluster: Deoxyribodipyrimidine photolyase; n=22;... 117 5e-25
UniRef50_Q2G0A6 Cluster: Deoxyribodipyrimidine photolyase, putat... 117 5e-25
UniRef50_Q8D319 Cluster: PhrB protein; n=1; Wigglesworthia gloss... 117 7e-25
UniRef50_A0JYK6 Cluster: Deoxyribodipyrimidine photo-lyase; n=11... 116 9e-25
UniRef50_Q389M9 Cluster: Deoxyribodipyrimidine photolyase, putat... 115 3e-24
UniRef50_Q2BJV5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 114 4e-24
UniRef50_Q4P1D4 Cluster: Putative uncharacterized protein; n=1; ... 114 4e-24
UniRef50_A3J6I6 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 114 5e-24
UniRef50_A1SV39 Cluster: DNA photolyase, FAD-binding-domain prot... 113 7e-24
UniRef50_Q5V438 Cluster: Photolyase/cryptochrome; n=3; Halobacte... 113 9e-24
UniRef50_Q31DQ9 Cluster: Deoxyribodipyrimidine photolyase family... 112 2e-23
UniRef50_A3Y1I2 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 112 2e-23
UniRef50_A7D5J0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 111 3e-23
UniRef50_Q5QXE0 Cluster: Cryptochrome DASH; n=4; Gammaproteobact... 111 4e-23
UniRef50_A4BJR5 Cluster: Putative deoxyribodipyrimidine photolya... 110 6e-23
UniRef50_Q4Q4G2 Cluster: Deoxyribodipyrimidine photolyase, putat... 110 6e-23
UniRef50_Q15TU1 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 109 1e-22
UniRef50_Q4USX1 Cluster: Photolyase-like protein; n=6; Xanthomon... 109 2e-22
UniRef50_A0UAX4 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;... 109 2e-22
UniRef50_Q712D5 Cluster: Cryptochrome 2; n=7; Oryza sativa|Rep: ... 109 2e-22
UniRef50_Q15ZK4 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 108 2e-22
UniRef50_Q0BXN5 Cluster: Deoxyribodipyrimidine photolyase family... 108 2e-22
UniRef50_Q42696 Cluster: CPH1; n=4; Viridiplantae|Rep: CPH1 - Ch... 108 3e-22
UniRef50_Q1G0Y2 Cluster: Cryptochrome dash; n=1; Karenia brevis|... 108 3e-22
UniRef50_A6H180 Cluster: Deoxyribodipyrimidine photolyase PhrB2;... 107 6e-22
UniRef50_A0YV59 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 107 6e-22
UniRef50_Q6EAM9 Cluster: Cryptochrome 2A apoprotein; n=4; rosids... 107 8e-22
UniRef50_Q2BAD6 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 104 4e-21
UniRef50_A4A625 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 104 4e-21
UniRef50_Q6CSJ7 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 104 4e-21
UniRef50_A5WDG4 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;... 104 5e-21
UniRef50_A4IYV0 Cluster: Deoxyribodipyrimidine photolyase; n=14;... 104 5e-21
UniRef50_Q3W0H9 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 103 7e-21
UniRef50_Q9RIY2 Cluster: Deoxiribopirymidine photolyase; n=1; St... 102 2e-20
UniRef50_A3JA18 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 101 3e-20
UniRef50_A1ZF62 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 101 3e-20
UniRef50_A1SER8 Cluster: Deoxyribodipyrimidine photo-lyase; n=12... 101 3e-20
UniRef50_P61496 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;... 101 4e-20
UniRef50_A4CPD0 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 101 5e-20
UniRef50_Q41DS7 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 100 7e-20
UniRef50_A4GI46 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 100 9e-20
UniRef50_UPI0000E0FEEE Cluster: Deoxyribodipyrimidine photolyase... 99 1e-19
UniRef50_Q9KK82 Cluster: Hypothetical DNA photolyase; n=3; Actin... 100 2e-19
UniRef50_Q1N8J8 Cluster: Deoxyribodipyrimidine photolyase; n=5; ... 100 2e-19
UniRef50_A4CAK2 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 100 2e-19
UniRef50_Q14N08 Cluster: Putative deoxyribodipyrimidine photolya... 99 2e-19
UniRef50_Q0GKU4 Cluster: Cryptochrome 1 protein; n=1; Brassica r... 99 2e-19
UniRef50_Q4P1U6 Cluster: Putative uncharacterized protein; n=1; ... 99 3e-19
UniRef50_Q5LS53 Cluster: Deoxyribodipyrimidine photolyase; n=25;... 98 4e-19
UniRef50_Q087D0 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;... 98 4e-19
UniRef50_Q6NKC0 Cluster: Putative riboflavin biosynthesis protei... 97 6e-19
UniRef50_A7S6B1 Cluster: Predicted protein; n=1; Nematostella ve... 97 6e-19
UniRef50_Q1VSH5 Cluster: Putative deoxyribodipyrimidine photolya... 97 8e-19
UniRef50_Q43125 Cluster: Cryptochrome-1; n=55; Streptophyta|Rep:... 97 1e-18
UniRef50_Q9KR33 Cluster: Cryptochrome DASH; n=22; Gammaproteobac... 96 2e-18
UniRef50_Q30Q43 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 95 2e-18
UniRef50_Q1GUF7 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 95 2e-18
UniRef50_P05066 Cluster: Deoxyribodipyrimidine photo-lyase, mito... 95 2e-18
UniRef50_Q47SJ5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 95 3e-18
UniRef50_A0Z3E3 Cluster: Deoxyribodipyrimidine photolyase, putat... 95 4e-18
UniRef50_A1U5B0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 94 6e-18
UniRef50_A6DFN1 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 94 8e-18
UniRef50_Q0V6S3 Cluster: Putative uncharacterized protein; n=1; ... 93 1e-17
UniRef50_A3X5Z0 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 91 7e-17
UniRef50_Q8FRW1 Cluster: Deoxyribodipyrimidine photolyase; n=5; ... 90 9e-17
UniRef50_A6EZB3 Cluster: Deoxyribodipyrimidine photolyase family... 89 2e-16
UniRef50_Q1MZA5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 89 2e-16
UniRef50_Q0I8L2 Cluster: Deoxyribodipyrimidine photolyase family... 89 2e-16
UniRef50_Q4T4M6 Cluster: Chromosome undetermined SCAF9582, whole... 89 3e-16
UniRef50_A6CY79 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 89 3e-16
UniRef50_A0LR66 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 89 3e-16
UniRef50_Q6SFP7 Cluster: Deoxyribodipyrimidine photolyase family... 88 4e-16
UniRef50_A6GLE5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 88 4e-16
UniRef50_A4BCW2 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 88 5e-16
UniRef50_A3JBH1 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 86 2e-15
UniRef50_A0HIH4 Cluster: DNA photolyase, FAD-binding; n=1; Comam... 86 2e-15
UniRef50_A6GPG1 Cluster: Deoxyribodipyrimidine photolyase family... 84 6e-15
UniRef50_UPI0000E0FEC6 Cluster: deoxyribodipyrimidine photolyase... 83 1e-14
UniRef50_Q5V0Z1 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 83 1e-14
UniRef50_Q18K78 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 83 1e-14
UniRef50_Q4PFI2 Cluster: Putative uncharacterized protein; n=1; ... 83 1e-14
UniRef50_Q28R72 Cluster: Deoxyribodipyrimidine photolyase; n=5; ... 82 3e-14
UniRef50_A5GT79 Cluster: Deoxyribodipyrimidine photolyase; n=7; ... 82 3e-14
UniRef50_A1SV40 Cluster: Deoxyribodipyrimidine photo-lyase; n=9;... 80 1e-13
UniRef50_Q4E3Z7 Cluster: DNA photolyase, putative; n=4; Trypanos... 80 1e-13
UniRef50_A4S782 Cluster: Predicted protein; n=3; Ostreococcus|Re... 79 2e-13
UniRef50_Q2S050 Cluster: Deoxyribodipyrimidine photolyase, putat... 77 7e-13
UniRef50_Q1VN24 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 77 9e-13
UniRef50_Q9KS67 Cluster: Cryptochrome-like protein cry2; n=15; G... 76 2e-12
UniRef50_A0YDZ0 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 75 3e-12
UniRef50_Q0UKK2 Cluster: Putative uncharacterized protein; n=1; ... 75 4e-12
UniRef50_Q4QHY9 Cluster: DNA photolyase, putative; n=3; Leishman... 72 3e-11
UniRef50_Q7SI68 Cluster: Putative cryptochrome DASH, mitochondri... 71 8e-11
UniRef50_Q4I1Q6 Cluster: Putative cryptochrome DASH; n=1; Gibber... 69 3e-10
UniRef50_Q8LB72 Cluster: Blue-light photoreceptor PHR2; n=2; Ara... 67 1e-09
UniRef50_A4B8N9 Cluster: Deoxyribodipyrimidine photolyase, putat... 66 2e-09
UniRef50_A6S5S9 Cluster: Putative uncharacterized protein; n=2; ... 65 3e-09
UniRef50_A5GIC8 Cluster: FAD binding domain of DNA photolyase; n... 63 1e-08
UniRef50_A1IU21 Cluster: Deoxyribodopyrimidine photolyase; n=3; ... 62 2e-08
UniRef50_Q2SQU0 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 62 4e-08
UniRef50_Q4PJE0 Cluster: Predicted deoxyribodipyrimidine photoly... 55 3e-06
UniRef50_A6GV05 Cluster: Probable deoxyribodipyrimidine photolya... 55 3e-06
UniRef50_Q8DLE3 Cluster: Tll0552 protein; n=1; Synechococcus elo... 54 6e-06
UniRef50_A3I0F4 Cluster: Putative uncharacterized protein; n=1; ... 52 4e-05
UniRef50_A3Z202 Cluster: Deoxyribodipyrimidine photolyase-relate... 49 2e-04
UniRef50_UPI0000F1E94A Cluster: PREDICTED: hypothetical protein;... 49 3e-04
UniRef50_A2C3R3 Cluster: DNA photolyase-like protein; n=2; Proch... 49 3e-04
UniRef50_Q2L1R0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 48 4e-04
UniRef50_A6DP25 Cluster: Deoxyribodipyrimidine photolyase-like p... 48 4e-04
UniRef50_A2BST4 Cluster: DNA photolyase-like protein; n=5; Proch... 48 5e-04
UniRef50_Q1W7G4 Cluster: DNA photolyase protein; n=22; Magnoliop... 48 7e-04
UniRef50_Q652J5 Cluster: Deoxyribodipyrimidine photolyase family... 47 0.001
UniRef50_Q4FNW5 Cluster: Deoxyribodipyrimidine photolyase-relate... 46 0.002
UniRef50_Q8N7D9 Cluster: CDNA FLJ25749 fis, clone TST06111, high... 46 0.002
UniRef50_Q0FFE9 Cluster: DNA photolyase-like protein; n=1; alpha... 45 0.003
UniRef50_A3JVT0 Cluster: DNA photolyase-like protein; n=1; Rhodo... 45 0.005
UniRef50_A3WEJ7 Cluster: DNA photolyase-like protein; n=2; Eryth... 44 0.008
UniRef50_A3VN66 Cluster: DNA photolyase-like protein; n=1; Parvu... 44 0.011
UniRef50_Q4FNX0 Cluster: DNA photolyase-like protein; n=2; Candi... 42 0.024
UniRef50_Q1GLX4 Cluster: DNA photolyase-like protein; n=3; Alpha... 42 0.024
UniRef50_Q9EN23 Cluster: AMV025; n=1; Amsacta moorei entomopoxvi... 41 0.075
UniRef50_A3UGV6 Cluster: DNA photolyase-like protein; n=1; Ocean... 41 0.075
UniRef50_Q28NI6 Cluster: DNA photolyase-like protein; n=6; Rhodo... 40 0.099
UniRef50_A5FW57 Cluster: Deoxyribodipyrimidine photolyase-like p... 40 0.13
UniRef50_Q2FRR1 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 40 0.13
UniRef50_Q98RW5 Cluster: Putative uncharacterized protein orf272... 39 0.23
UniRef50_Q947B2 Cluster: Cryptochrome 2; n=3; Hordeum vulgare|Re... 39 0.30
UniRef50_Q947B4 Cluster: Cryptochrome 1a; n=7; Poaceae|Rep: Cryp... 38 0.53
UniRef50_UPI00015C60C8 Cluster: hypothetical protein CKO_03947; ... 37 0.92
UniRef50_Q95UQ7 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 37 0.92
UniRef50_Q8PYK9 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 37 0.92
UniRef50_A0DF13 Cluster: Chromosome undetermined scaffold_48, wh... 36 1.6
UniRef50_UPI00006CFDC9 Cluster: Myb-like DNA-binding domain cont... 36 2.1
UniRef50_A2FJY4 Cluster: Putative uncharacterized protein; n=1; ... 36 2.1
UniRef50_Q5UUY8 Cluster: Class-II photolyase; n=1; Antonospora l... 36 2.1
UniRef50_UPI00006CBB71 Cluster: hypothetical protein TTHERM_0056... 36 2.8
UniRef50_Q9KR11 Cluster: Protein tolB precursor; n=59; Proteobac... 36 2.8
UniRef50_A7B5Z5 Cluster: Putative uncharacterized protein; n=1; ... 35 4.9
UniRef50_Q5ZW53 Cluster: Putative uncharacterized protein; n=2; ... 34 6.5
UniRef50_A6WFC1 Cluster: Deoxyribodipyrimidine photolyase-like p... 34 6.5
UniRef50_A6Q939 Cluster: Flagellar biosynthesis protein FlhF; n=... 34 6.5
UniRef50_Q241N9 Cluster: Putative uncharacterized protein; n=1; ... 34 6.5
UniRef50_Q9KDU5 Cluster: BH1116 protein; n=5; Bacteria|Rep: BH11... 34 8.6
UniRef50_Q8GFD6 Cluster: MobX; n=1; Enterococcus faecalis|Rep: M... 34 8.6
UniRef50_A6LRL4 Cluster: ATP-dependent protease; n=1; Clostridiu... 34 8.6
UniRef50_Q4VPF3 Cluster: Phantastica transcription factor b; n=1... 34 8.6
UniRef50_A0CC18 Cluster: Chromosome undetermined scaffold_166, w... 34 8.6
UniRef50_Q8N387 Cluster: Mucin-15 precursor; n=17; Eutheria|Rep:... 34 8.6
>UniRef50_Q49AN0 Cluster: Cryptochrome-2; n=106; Eumetazoa|Rep:
Cryptochrome-2 - Homo sapiens (Human)
Length = 593
Score = 444 bits (1094), Expect = e-123
Identities = 207/439 (47%), Positives = 291/439 (66%), Gaps = 11/439 (2%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDP--NIKDKVGINRLRFLLQSLEX 65
+HWFR LR+HDN AL A+ A +R +Y LDP VGINR RFLLQSLE
Sbjct: 25 VHWFRKGLRLHDNPALLAAVRGAR----CVRCVYILDPWFAASSSVGINRWRFLLQSLED 80
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 125
+ L+V+RG+ D+ P+LF +W V LT + D +P ++D I +A++ G
Sbjct: 81 LDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKEAG 140
Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINV-KEPIEISNVLSSHCKPID 184
V + HT+YD+ +++ N PLTY++F +++ + + K+P+ + +
Sbjct: 141 VEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQAIISRMELPKKPVGLVTSQQMESCRAE 200
Query: 185 IQS---ENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSP 241
IQ E Y +P+L+EL E L P + GGETEAL RL+ ++ +K WV +E+P +
Sbjct: 201 IQENHDETYGVPSLEELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNA 260
Query: 242 NSIEPSTTVLSPYISHGCLSAKLFYYKLKEV-ENGRQHTLPPVSLMGQLMWREFYYTAGT 300
NS+ S T LSPY+ GCLS +LFYY+L ++ + ++++ PP+SL GQL+WREF+YTA T
Sbjct: 261 NSLLASPTGLSPYLRFGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAAT 320
Query: 301 GVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMV 360
FD+M GN ICIQIPW +N L WAEGKTG+P++DAIM QL+QEGWIHHLARH V
Sbjct: 321 NNPRFDRMEGNPICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAV 380
Query: 361 ACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQK 420
ACFLTRGDLW+SWE G ++F++ LLD D+S+NAG+WMWLS SAFF ++F Y PV FG++
Sbjct: 381 ACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRR 440
Query: 421 TDKEGVYIKKYVPELKKYP 439
TD G YI++Y+P+LK +P
Sbjct: 441 TDPSGDYIRRYLPKLKAFP 459
>UniRef50_Q52Z99 Cluster: 6-4 photolyase; n=4; Viridiplantae|Rep:
6-4 photolyase - Dunaliella salina
Length = 600
Score = 426 bits (1050), Expect = e-118
Identities = 208/443 (46%), Positives = 282/443 (63%), Gaps = 19/443 (4%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI----KDKVGINRLRFLLQSL 63
I WFR LR+HDN ALR+A + + PI+ +DP +KVG+NR +FLL+SL
Sbjct: 52 ILWFRKGLRLHDNPALRDACTGSA----AVFPIFIIDPYFLQKSNNKVGVNRYQFLLESL 107
Query: 64 EXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEK 123
+ L VLRG +++P++ DW +K L ++D +P +D ++D+A +
Sbjct: 108 SDLNSSLTSLGSQLLVLRGTPEEVIPRVLRDWSIKKLCYEIDTEPYAKARDARVDDMARE 167
Query: 124 KGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPI 183
GV + K HT+YD ++REN G PLT Q F LV + P+ ++ P+
Sbjct: 168 AGVEVKKHWSHTLYDTDMLVRENKGKAPLTMQAFEKLVDRVG--HPLTALPAPTARLPPV 225
Query: 184 D-----IQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPN 238
D I+ +P +E+ E A K GGETEALKRL YM +W FEKP+
Sbjct: 226 DVSLPGIKDAEVGVPTWQEMGFKEAPTAIFK--GGETEALKRLEHYMKDTKWXASFEKPS 283
Query: 239 SSPNSI-EPSTTVLSPYISHGCLSAKLFYYKLKEVENGR-QHTLPPVSLMGQLMWREFYY 296
+ P++ EPSTT LSPY+ GCLSA+ F+ +L +V +H+ PP+SL GQL+WREF+Y
Sbjct: 284 TDPSAFTEPSTTALSPYLKFGCLSARFFHQRLLDVYRLHPKHSQPPMSLRGQLLWREFFY 343
Query: 297 TAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLA 356
T G+ NFD++ GN IC QI W N A LKAW +G TGYP++DA M QL++ GW+HHLA
Sbjct: 344 TLGSHTPNFDRIAGNPICRQITWDTNPALLKAWRDGATGYPWIDAAMTQLREWGWMHHLA 403
Query: 357 RHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVA 416
RH VACFLTRGDL++SWE G ++FE+ LLD D+ +NA NWMWLSASAFF +YFRVYSPV
Sbjct: 404 RHSVACFLTRGDLYLSWESGKEVFEELLLDADYFINAANWMWLSASAFFAQYFRVYSPVV 463
Query: 417 FGQKTDKEGVYIKKYVPELKKYP 439
FG+K DKEG YI+K++P LK P
Sbjct: 464 FGKKYDKEGAYIRKFLPVLKDMP 486
>UniRef50_Q7ZYX5 Cluster: Cry4 protein; n=13; Euteleostomi|Rep: Cry4
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 579
Score = 419 bits (1033), Expect = e-116
Identities = 199/441 (45%), Positives = 288/441 (65%), Gaps = 14/441 (3%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD---KVGINRLRFLLQSLE 64
IH FR LR+HDN +L A+ + L P+Y LD +G R RFLLQSLE
Sbjct: 27 IHLFRKGLRLHDNPSLLGALASSST----LYPVYVLDRVFLQGAMHMGALRWRFLLQSLE 82
Query: 65 XXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 124
+ L+VL G ++L +L W + ++ +++P + + D+ I+ +A++
Sbjct: 83 DLDTRLRAIGSRLFVLCGSTANILRELVAQWGITQISYDTEVEPYYTRMDKDIQTVAQEN 142
Query: 125 GVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKE-PI-EISNVLSSHC-K 181
G+ + HT+YDV ++++ N G+ PLTY+KFL ++ + E P ++S C
Sbjct: 143 GLQTYTCISHTLYDVKRIVKANGGSPPLTYKKFLHVLSVLGEPEKPARDVSIEDFQRCVT 202
Query: 182 PIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSP 241
P+D+ Y++P+L +L + E A V + GGE+ AL+RL + + WV F KP + P
Sbjct: 203 PVDVDRV-YAVPSLADLGLQVE--AEVLWPGGESHALQRLEKHFQSQGWVANFSKPRTIP 259
Query: 242 NSIEPSTTVLSPYISHGCLSAKLFYYKLKEV-ENGRQHTLPPVSLMGQLMWREFYYTAGT 300
NS+ PSTT LSPY+S GCLS + FY++L + + H+LPPVSL GQ++WREF+YT +
Sbjct: 260 NSLLPSTTGLSPYLSLGCLSVRTFYHRLNSIYAQSKNHSLPPVSLQGQVLWREFFYTVAS 319
Query: 301 GVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMV 360
NF KM GN+IC+QI W + L+ W +TG+P++DAIM QL+QEGWIHHLARH V
Sbjct: 320 ATPNFTKMEGNSICLQIDWYHDPERLEKWRTAQTGFPWIDAIMTQLRQEGWIHHLARHAV 379
Query: 361 ACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQK 420
ACFLTRGDLWI+WEEG K+FE++LLD D+S+NAGNWMWLSASAFF+KY R++ PV FG++
Sbjct: 380 ACFLTRGDLWITWEEGMKVFEEFLLDADYSVNAGNWMWLSASAFFHKYTRIFCPVRFGRR 439
Query: 421 TDKEGVYIKKYVPELKKYPRE 441
TD +G Y++KY+P LK +P +
Sbjct: 440 TDPQGEYLRKYLPVLKNFPSQ 460
>UniRef50_Q4SAM2 Cluster: Chromosome undetermined SCAF14682, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14682,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 606
Score = 404 bits (995), Expect = e-111
Identities = 185/380 (48%), Positives = 260/380 (68%), Gaps = 5/380 (1%)
Query: 56 LRFLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDE 115
LRFLLQ LE + L+V+RG+ ++ P+LF +W++ LT + D +P ++D
Sbjct: 19 LRFLLQCLEDLDANLRKLNSRLFVIRGQPANVFPRLFKEWKISRLTFEYDSEPFGKERDA 78
Query: 116 YIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKE-PIE-IS 173
I+ +A++ GV + ++ HT+YD+ K++ N G PLTY++F +L+ ++ E P+E +S
Sbjct: 79 AIKKLAKEAGVEVIVKISHTLYDLDKIIELNGGQPPLTYKRFQTLISRMDPPEMPVEMLS 138
Query: 174 NVLSSHC-KPI-DIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWV 231
L C PI + E + +P+L+EL D E L + GGETEAL R+ ++ +K WV
Sbjct: 139 GNLMGRCVTPISEDHGEKFGVPSLEELGFDIEGLPSAVWPGGETEALTRIERHLERKAWV 198
Query: 232 CKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEV-ENGRQHTLPPVSLMGQLM 290
FE+P + NS+ S T LSPY+ GCLS +LFY+KL ++ +++T PP+SL GQL+
Sbjct: 199 ANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLTDLYRKVKKNTSPPLSLYGQLL 258
Query: 291 WREFYYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEG 350
WREF+YTA T FDKM GN IC++IPW +N L WAE KTG+P++DAIM QL+QEG
Sbjct: 259 WREFFYTAATNNPRFDKMEGNPICVRIPWDRNMEALAKWAEAKTGFPWIDAIMTQLRQEG 318
Query: 351 WIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFR 410
WIHHLARH VACFLTRGDLWISWEEG K+FE+ LLD DWS+NAG+WMWLS S+FF ++F
Sbjct: 319 WIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFH 378
Query: 411 VYSPVAFGQKTDKEGVYIKK 430
Y PV FG++TD G +I +
Sbjct: 379 CYCPVGFGRRTDPNGDFISR 398
>UniRef50_A7P7Q6 Cluster: Chromosome chr9 scaffold_7, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr9 scaffold_7, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 547
Score = 402 bits (990), Expect = e-111
Identities = 201/456 (44%), Positives = 293/456 (64%), Gaps = 20/456 (4%)
Query: 1 MSKTPTVIHWFRLDLRIHDNLALRNAINEAE--NRKHLLRPIYFL--DPNI----KDKVG 52
M+ + + WFR LRIHDN AL++A E+ ++ P YF+ DPN + G
Sbjct: 1 MASGSSSLMWFRKGLRIHDNPALQHAAKESNCVYPVFVIDP-YFMEPDPNAFSPGSSRAG 59
Query: 53 INRLRFLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQ 112
+NR+RFLL+SL + L VL+G +++ + +W+VK L + D DP +
Sbjct: 60 LNRIRFLLESLVDLDSSLRQLGSRLLVLKGDPGEVIIRCLKEWEVKRLCFEYDTDPYYQA 119
Query: 113 QDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEI 172
D +++ A G+ + V HT++D +++++N G PL+YQ FL L + +
Sbjct: 120 LDIKVKNYASAAGIEVFSPVSHTLFDSAEIIQKNGGRPPLSYQSFLKLAGQPSWASSPLL 179
Query: 173 SNVLSSHCKPI-DIQS-ENYSIPNLKEL---QIDEETLAPVKYHGGETEALKRLNLYMSK 227
+ + S P+ D+ + E ++P +KEL +I ++ P K GGE+EALKRL +
Sbjct: 180 TTL--SWLPPVGDVGTCEISNVPTVKELGYEEIGQDESTPFK--GGESEALKRLRESIRD 235
Query: 228 KEWVCKFEKPNSSPNS-IEPSTTVLSPYISHGCLSAKLFYYKLKEV-ENGRQHTLPPVSL 285
KEWV FEKP P++ ++P+TTVLSPY+ GCLS++ FY L +V +N + HT PPVSL
Sbjct: 236 KEWVANFEKPKGDPSAFLKPATTVLSPYLKFGCLSSRYFYQCLTDVYKNMKWHTSPPVSL 295
Query: 286 MGQLMWREFYYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQ 345
+GQL+WR+F+YT G G NFD+M GN IC QIPW +D L AW E +TGYP++DAIM Q
Sbjct: 296 VGQLLWRDFFYTVGFGTPNFDRMKGNRICKQIPWNDDDELLAAWREARTGYPWIDAIMVQ 355
Query: 346 LKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFF 405
L++ GW+HHLARH VACFLTRGDL++ WE+G +FE L+D DW++N GNW+WLS S+FF
Sbjct: 356 LRKWGWMHHLARHCVACFLTRGDLFVHWEKGRDVFERLLIDSDWAINNGNWLWLSCSSFF 415
Query: 406 YKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPRE 441
Y+Y R+YSP++FG+K D G YI+ ++P LK P+E
Sbjct: 416 YQYNRIYSPISFGKKYDPNGNYIRHFLPILKDMPKE 451
>UniRef50_O48652 Cluster: 6-4 photolyase; n=3; Arabidopsis
thaliana|Rep: 6-4 photolyase - Arabidopsis thaliana
(Mouse-ear cress)
Length = 537
Score = 402 bits (989), Expect = e-110
Identities = 196/448 (43%), Positives = 286/448 (63%), Gaps = 22/448 (4%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD-----------KVGINRLRF 58
WFR LR+HDN AL A +E + P++ +DP+ + + G+NR+RF
Sbjct: 10 WFRKGLRVHDNPALEYASKGSE----FMYPVFVIDPHYMESDPSAFSPGSSRAGVNRIRF 65
Query: 59 LLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIE 118
LL+SL+ + L V +G+ ++L + +W+VK L + D DP + D ++
Sbjct: 66 LLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWKVKRLCFEYDTDPYYQALDVKVK 125
Query: 119 DIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSS 178
D A GV + V HT+++ ++ +N G PL+YQ FL + + + + + S
Sbjct: 126 DYASSTGVEVFSPVSHTLFNPAHIIEKNGGKPPLSYQSFLKVAGEPSCAKSELVMSY--S 183
Query: 179 HCKPI-DIQSENYS-IPNLKELQI-DEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFE 235
PI DI + S +P+L+EL D+E + GGE+EALKRL +S K WV FE
Sbjct: 184 SLPPIGDIGNLGISEVPSLEELGYKDDEQADWTPFRGGESEALKRLTKSISDKAWVANFE 243
Query: 236 KPNSSPNS-IEPSTTVLSPYISHGCLSAKLFYYKLKEV-ENGRQHTLPPVSLMGQLMWRE 293
KP P++ ++P+TTV+SPY+ GCLS++ FY L+ + ++ ++HT PPVSL+GQL+WRE
Sbjct: 244 KPKGDPSAFLKPATTVMSPYLKFGCLSSRYFYQCLQNIYKDVKKHTSPPVSLLGQLLWRE 303
Query: 294 FYYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 353
F+YT G NFDKM GN IC QIPW ++ A L AW +GKTGYP++DAIM QL + GW+H
Sbjct: 304 FFYTTAFGTPNFDKMKGNRICKQIPWNEDHAMLAAWRDGKTGYPWIDAIMVQLLKWGWMH 363
Query: 354 HLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYS 413
HLARH VACFLTRGDL+I WE+G +FE L+D DW++N GNWMWLS S+FFY++ R+YS
Sbjct: 364 HLARHCVACFLTRGDLFIHWEQGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQFNRIYS 423
Query: 414 PVAFGQKTDKEGVYIKKYVPELKKYPRE 441
P++FG+K D +G YI+ ++P LK P++
Sbjct: 424 PISFGKKYDPDGKYIRHFLPVLKDMPKQ 451
>UniRef50_A7S6B3 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 513
Score = 334 bits (820), Expect = 3e-90
Identities = 174/442 (39%), Positives = 253/442 (57%), Gaps = 13/442 (2%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGI--NRLRFLLQSLEX 65
+HWFR DLR+HDN AL + + +YFLDP + + NR FLL+SL
Sbjct: 19 MHWFRKDLRLHDNPALLESFKNCQ----AFYGVYFLDPASVQRSNLSPNRWWFLLESLRD 74
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 125
+ L V+RG+ V +PKL D W +K LT + D +P Q+D + +A+ G
Sbjct: 75 LDYNLRSLGSRLLVVRGQPVQEMPKLLDQWNIKRLTLEYDSEPPAKQRDAVVTHLAKNLG 134
Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPI--EISNVLSSHC-KP 182
V + +RV HT+YDV VL N+G +P+T+ + + + P + + C P
Sbjct: 135 VEVIQRVSHTLYDVETVLETNDGKLPMTFDEMAKTAEQLGPPCPPCQTVDKTVFGACLTP 194
Query: 183 IDIQ-SENYSIPNLKELQIDE--ETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNS 239
+ ++ Y +P L E + E E A + GGE EAL+RL+ + KK FE+
Sbjct: 195 VGPDHADKYGVPLLSEFGMKELKEATAKKYWTGGEPEALRRLSAAL-KKCAENDFEERGW 253
Query: 240 SPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAG 299
+ + + + LSPY+ GCLS +L+Y +L + ++PP +L L+ RE +
Sbjct: 254 TIDEMFSNDAHLSPYMRFGCLSPRLYYQQLALTYMKEKKSIPPATLFTGLVRRELFLHVA 313
Query: 300 TGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHM 359
+ A+ DKM+ N + +Q PW +N L+ W EGKTG+P++DAIMRQL++EGWIHHLAR
Sbjct: 314 SHNADLDKMLDNPLSVQFPWEENKEGLERWKEGKTGFPWIDAIMRQLREEGWIHHLARQA 373
Query: 360 VACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQ 419
V CFLTRG LW+SWEEG K F++ LD +WSLNA NW+WLS S++ + Y PV G+
Sbjct: 374 VGCFLTRGCLWVSWEEGFKAFDELQLDAEWSLNASNWLWLSCSSYVHGAVPWYCPVEVGK 433
Query: 420 KTDKEGVYIKKYVPELKKYPRE 441
K D G YIK+YVPE++ P E
Sbjct: 434 KVDPTGDYIKRYVPEVRGLPSE 455
>UniRef50_A2R6W6 Cluster: Cofactor: FAD; n=1; Aspergillus niger|Rep:
Cofactor: FAD - Aspergillus niger
Length = 567
Score = 305 bits (749), Expect = 1e-81
Identities = 174/457 (38%), Positives = 267/457 (58%), Gaps = 29/457 (6%)
Query: 5 PTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQS 62
PTVI W R DLR+HDN AL+ A++ N + PI+ DP+ + +VG NR RFLL+
Sbjct: 7 PTVIFWHRTDLRLHDNPALQAALSL--NPSTFI-PIFTWDPHYAYQVRVGPNRWRFLLEC 63
Query: 63 LEXXXXXXXXXXTC--LYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDI 120
L+V+R + PKLF W +L + D D ++DE I +
Sbjct: 64 QNDLSQSYRKLNPKQKLWVVREAPQTVFPKLFKAWGATHLVFESDTDGYARERDETIRKL 123
Query: 121 AEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSIN-------VKEPIEIS 173
A + GV + + T++D +V+++N G ++ + ++ IN V P I
Sbjct: 124 ANEAGVEVIVKSGRTLFDSDEVVKQNKGEPTMSIHQVEKAIEQINNGVPDRPVDAPERIP 183
Query: 174 NVLSSHCKPIDIQSE-NYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKE-WV 231
+ L K DI + ++SIP L EL ID A +HGGE+ AL+ L Y+ + E ++
Sbjct: 184 DPLGEE-KMRDISPKGDFSIPTLDELSIDPSQ-ATSPHHGGESIALEMLTTYLQQNEDYI 241
Query: 232 CKFEKPNSSPNSIEP-STTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVS-----L 285
FEKP +SP + P +TT+LSP++ G LS + F++ +++ R+ P S L
Sbjct: 242 ATFEKPKTSPAAFHPQATTLLSPHLHFGSLSVRKFWHDVQDTLQQRESAHKPTSDLPTNL 301
Query: 286 MGQLMWREFYYTAGTGVAN-FDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMR 344
GQL++RE ++ A + + + GN I ++ + + + + W EG+TG+P++DA+MR
Sbjct: 302 PGQLLFREMFFAAQAALGPVYAQTRGNKI-VRF---QAEVWFRRWKEGRTGFPWIDALMR 357
Query: 345 QLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF 404
QLK EGWIHHL RH VACFLTRG ++ WE GA++FE++L+D++ + N GNWMWLS +AF
Sbjct: 358 QLKNEGWIHHLGRHSVACFLTRGGCYVHWERGAEVFEEWLIDHETASNVGNWMWLSCTAF 417
Query: 405 FYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPRE 441
F +Y R YSPVAFG+K D EG +I+ Y+PEL+ Y ++
Sbjct: 418 FTQYNRCYSPVAFGKKWDPEGRFIRHYIPELEHYDKK 454
>UniRef50_Q019Z4 Cluster: Cryptochrome-like protein 1; n=4;
Ostreococcus|Rep: Cryptochrome-like protein 1 -
Ostreococcus tauri
Length = 1646
Score = 276 bits (676), Expect = 1e-72
Identities = 119/196 (60%), Positives = 146/196 (74%), Gaps = 2/196 (1%)
Query: 246 PSTTVLSPYISHGCLSAKLFYYKLKEV--ENGRQHTLPPVSLMGQLMWREFYYTAGTGVA 303
PSTT LSPY+ GC+S ++FY++L V E +H+ PP SLMGQLMWREFYY G
Sbjct: 1385 PSTTALSPYMKFGCVSPRVFYHELTAVYKELEGKHSKPPTSLMGQLMWREFYYLVAAGTK 1444
Query: 304 NFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACF 363
NFDKM GNAIC QIPW K+ AW +TG+P++DA M QL++EGW+HHLARH VACF
Sbjct: 1445 NFDKMEGNAICRQIPWKKDRELFAAWENAQTGFPWIDAAMTQLRREGWLHHLARHAVACF 1504
Query: 364 LTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDK 423
LTRGDL+I WE G F+ L+D DW+LN GNWMWLS SAFFY+YFRVYSP+AF +K DK
Sbjct: 1505 LTRGDLFIHWEWGRDAFDRDLVDADWALNNGNWMWLSCSAFFYQYFRVYSPIAFAKKYDK 1564
Query: 424 EGVYIKKYVPELKKYP 439
+G Y++ Y+P LK P
Sbjct: 1565 DGQYVRHYLPVLKNMP 1580
Score = 128 bits (310), Expect = 2e-28
Identities = 84/249 (33%), Positives = 126/249 (50%), Gaps = 22/249 (8%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQSLEXXX 67
WFR LR+HDN AL A +P++ LDP +VG NR+RFLLQSL
Sbjct: 1104 WFRKALRVHDNPALSRGTLHAT----ACQPVFVLDPWFCQPSRVGANRMRFLLQSLRDLD 1159
Query: 68 XXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVF 127
+ L VL G+ +LP+ W+V +T + DI+P +D + E+ GV
Sbjct: 1160 AQLRARGSSLLVLHGEPRVVLPRACKKWRVDSVTWEHDIEPYAKIRDAAVRGALERAGVE 1219
Query: 128 INKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINV-KEPIEISNVLSSHCKPIDIQ 186
+ HT+YDV ++L + GA P TYQ F +V + PI+ + D +
Sbjct: 1220 CHAASGHTLYDVDEMLEKCKGAPPTTYQGFFKIVDKMGAPNAPIDAMEKMPGSFASSDEE 1279
Query: 187 --------SENYSIPNLKELQI----DEETLAPVKYHGGETEALKRLNLYMSKKEWVCKF 234
++ Y IP L++L D+E V GGETE L+RL L +++KEW+ +F
Sbjct: 1280 TKALVQGVADAYGIPTLEDLGYEPLGDDEGFPGV---GGETEGLRRLRLMLARKEWIGQF 1336
Query: 235 EKPNSSPNS 243
EKP+++P +
Sbjct: 1337 EKPSTNPTT 1345
>UniRef50_O77059 Cluster: CG3772-PA; n=15; Coelomata|Rep: CG3772-PA
- Drosophila melanogaster (Fruit fly)
Length = 542
Score = 272 bits (668), Expect = 9e-72
Identities = 165/461 (35%), Positives = 244/461 (52%), Gaps = 32/461 (6%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD--KVGINRLRFLLQSLEXXX 67
WFR LR+HDN AL A+ + + L+ P++ D VG NR+RFLL SL+
Sbjct: 10 WFRHGLRLHDNPALLAALADKDQGIALI-PVFIFDGESAGTKNVGYNRMRFLLDSLQDID 68
Query: 68 XXXXXXXTC---LYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 124
L V G+ + +L + ++ + + D +P + ++DE I + +
Sbjct: 69 DQLQAATDGRGRLLVFEGEPAYIFRRLHEQVRLHRICIEQDCEPIWNERDESIRSLCREL 128
Query: 125 GVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPID 184
+ ++V HT++D V+ N G PLTYQ FL V+ I + P ++ ++
Sbjct: 129 NIDFVEKVSHTLWDPQLVIETNGGIPPLTYQMFLHTVQIIGLP-PRPTADARLEDATFVE 187
Query: 185 IQSENY-SIPNLKELQIDEET---------LAPVKYHGGETEALKRLN--LYMSKKEWVC 232
+ E S+ ++L E LA + + GGET+AL L+ L + + +
Sbjct: 188 LDPEFCRSLKLFEQLPTPEHFNVYGDNMGFLAKINWRGGETQALLLLDERLKVEQHAFER 247
Query: 233 KFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKL----KEVE-----NGRQHTLPPV 283
F PN + +I S +S ++ GCLS + FY+ + K V+ G Q T
Sbjct: 248 GFYLPNQALPNIHDSPKSMSAHLRFGCLSVRRFYWSVHDLFKNVQLRACVRGVQMT-GGA 306
Query: 284 SLMGQLMWREFYYTAGTGVANFDKMVGNAICIQIPWTK-NDAFLKAWAEGKTGYPFVDAI 342
+ GQL+WRE++YT N+D+M GN IC+ IPW K N+ L++W G+TG+P +D
Sbjct: 307 HITGQLIWREYFYTMSVNNPNYDRMEGNDICLSIPWAKPNENLLQSWRLGQTGFPLIDGA 366
Query: 343 MRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSAS 402
MRQL EGW+HH R+ VA FLTRG LW SWE G + F YLLD DWS+ AGNWMW+S+S
Sbjct: 367 MRQLLAEGWLHHTLRNTVATFLTRGGLWQSWEHGLQHFLKYLLDADWSVCAGNWMWVSSS 426
Query: 403 AF--FYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPRE 441
AF V PVA ++ D +G YIK+YVPEL P+E
Sbjct: 427 AFERLLDSSLVTCPVALAKRLDPDGTYIKQYVPELMNVPKE 467
>UniRef50_A1CJL8 Cluster: DNA photolyase, putative; n=4;
Pezizomycotina|Rep: DNA photolyase, putative -
Aspergillus clavatus
Length = 613
Score = 226 bits (553), Expect = 8e-58
Identities = 112/284 (39%), Positives = 178/284 (62%), Gaps = 32/284 (11%)
Query: 189 NYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEP-S 247
++++P ++E+ ID +LA + GGET AL+ L Y+ E+V FEKP +SP + EP +
Sbjct: 224 DFAVPTMEEIGIDG-SLARSPHRGGETAALRVLAGYIQDGEYVGTFEKPKTSPAAFEPQA 282
Query: 248 TTVLSPYISHGCLSAKLFYYKLKEVENGRQ-----HTLPPVSLMGQLMWREFYYTAGTGV 302
TT+LSP++ G LS + F++ ++ V R+ + P +L GQL++R+ Y+ A +
Sbjct: 283 TTLLSPHLHFGSLSVRKFWWDVQGVLQQRRKQKKANASIPTNLPGQLLFRDMYFAAQAAI 342
Query: 303 AN-FDKMVGNAICIQIPW------------------------TKNDAFLKAWAEGKTGYP 337
+ F + +GN I W ++ + + + W EG+TG+P
Sbjct: 343 GHAFGQTLGNKYVRFIDWHLPTNYITTEEGKYQPDGTYTVDSSEAENWFRRWKEGRTGFP 402
Query: 338 FVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWM 397
++DA+MRQLK EGWIHHL RH VACFLTRG ++SWE GA++FED+L+D++ + N GNW
Sbjct: 403 WIDALMRQLKLEGWIHHLGRHSVACFLTRGGCYVSWERGAEVFEDWLVDHETACNVGNWQ 462
Query: 398 WLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPRE 441
WLS +AF+ +Y+ YSP+AFG+K D EG ++++Y PEL + ++
Sbjct: 463 WLSCTAFYSQYYHCYSPIAFGKKWDPEGEFVRRYCPELANFDKK 506
Score = 75.8 bits (178), Expect = 2e-12
Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 7/171 (4%)
Query: 5 PTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLL-- 60
P V++W R DLR+HD+ AL A+ A N + PI+ DP+ + +VG NR +FLL
Sbjct: 3 PVVLYWHRTDLRLHDSPALHAAL--ALNPSIFI-PIWTWDPHYVYRTRVGPNRWKFLLEC 59
Query: 61 QSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDI 120
QS L+V+R +LPKL+ WQ+ +L + D D +DE + +
Sbjct: 60 QSDLSAAYTTLNPKQRLWVVREAPQSVLPKLWKKWQITHLVFEQDTDAYARDRDEAVLRM 119
Query: 121 AEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIE 171
A GV + ++ T++D +++R+N G ++ + + I P +
Sbjct: 120 ARDAGVEVIVQMGRTLFDPDELVRKNGGKPTMSIAQVQKAAEKIGDGTPAQ 170
>UniRef50_Q4PCL9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 684
Score = 226 bits (552), Expect = 1e-57
Identities = 118/279 (42%), Positives = 166/279 (59%), Gaps = 27/279 (9%)
Query: 187 SENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSP--NSI 244
SE +S P L L +D + GGE AL++L ++V F KP +SP ++
Sbjct: 245 SELFSAPTLASLGMDASKVKDT-IKGGEPIALEKLANICKDAKYVATFAKPKTSPGQSAE 303
Query: 245 EPSTTVLSPYISHGCLSAKLFYYKLKEVEN---GRQHTLPPVSLMGQLMWREFYYTAGTG 301
+PSTT+LSPY+ GCLS + ++ +E +N G T PP +L GQL++R+ Y A
Sbjct: 304 DPSTTLLSPYLKFGCLSVRKLWWDAEEAKNRYKGGSKTGPPENLNGQLLFRDMYACAEYA 363
Query: 302 VAN-FDKMVGNAICIQIPW--------------------TKNDAFLKAWAEGKTGYPFVD 340
+ + F ++ GN +C + W ++A L A+ G+TG+P++D
Sbjct: 364 IGDAFGRVRGNEVCRYMDWYLPTHYDENGEVVLPRPAGDAVSEARLSAYKLGQTGFPWID 423
Query: 341 AIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS 400
A+MRQL+ EGW+HHL RH VA FLTRG WISWE GA+IF++YL+D+D N GNWMWLS
Sbjct: 424 ALMRQLRLEGWMHHLGRHSVAAFLTRGQCWISWERGAEIFDEYLIDWDPCSNPGNWMWLS 483
Query: 401 ASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYP 439
SAFF +YFR+Y F K DK G ++KY PEL K+P
Sbjct: 484 CSAFFTQYFRLYGLATFPAKYDKTGALVRKYCPELAKFP 522
Score = 94.3 bits (224), Expect = 6e-18
Identities = 57/176 (32%), Positives = 96/176 (54%), Gaps = 8/176 (4%)
Query: 1 MSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRF 58
MSK V++WFR DLR+HD+ AL+ A+ + + L P++ DPN K +VG+NR RF
Sbjct: 1 MSKHVRVLYWFRTDLRLHDSPALQAAL---DLKPAALFPVWCWDPNYVYKHRVGVNRFRF 57
Query: 59 LLQSLEXXXX--XXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEY 116
LL+S+ + L V+RG+ +LLP+L+ W + +L + D ++D+
Sbjct: 58 LLESMIALSKNITSTQSNSQLLVVRGEPTELLPELWKRWSITHLVFEKDPSAYGRRRDQL 117
Query: 117 IEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI-NVKEPIE 171
I + AEK V + H +YD +V+ +N G ++ +V + +V +PI+
Sbjct: 118 ILEAAEKSNVKVVAVQGHHLYDPEQVVNKNKGKPTMSMSTLQKIVADMGDVPKPID 173
>UniRef50_A4QZX5 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 614
Score = 181 bits (440), Expect = 4e-44
Identities = 84/183 (45%), Positives = 118/183 (64%), Gaps = 26/183 (14%)
Query: 279 TLPPVSLMGQLMWREFYYTAGTGVAN-FDKMVGNAICIQIPW------------------ 319
+LPP SL GQL++R+ Y+ A + F + GNA C IPW
Sbjct: 271 SLPPESLTGQLLFRDMYFAAQAAIGPCFSQTAGNAHCRFIPWHLPSHVEDNAVSGQVLRK 330
Query: 320 -------TKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWIS 372
+ +++ + W G+TG+P++DA+MRQL+ EGWIHHL RH VACFLTRG ++S
Sbjct: 331 FEYEVDSEQAESWFRRWEAGQTGFPWIDALMRQLRVEGWIHHLGRHSVACFLTRGGCYVS 390
Query: 373 WEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYV 432
WE G +FE+ LLD++ + NAGNW WLS +AFF +YFR YSP++FG+K D +G +I+K+V
Sbjct: 391 WERGLDVFEELLLDHEPACNAGNWQWLSCTAFFSQYFRCYSPISFGKKWDPDGTFIRKWV 450
Query: 433 PEL 435
PEL
Sbjct: 451 PEL 453
Score = 80.2 bits (189), Expect = 1e-13
Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 8/175 (4%)
Query: 7 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLL--QS 62
VI+WFR DLR+HD+ AL+ A+ + +L PI+ DP+ + + G+NR ++LL Q+
Sbjct: 6 VIYWFRTDLRLHDSPALQAAL---DLDPAVLWPIFTWDPHYVYRSRGGLNRWQYLLDCQN 62
Query: 63 LEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAE 122
+ L+VLR L PKLF W+V +L + D D Q+DE ++ A+
Sbjct: 63 DLSASITNLNPRSKLFVLREAPQSLFPKLFKAWKVTHLVFEKDTDAYARQRDEVVKKAAQ 122
Query: 123 KKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSL-VKSINVKEPIEISNVL 176
GV + R T++D +++ N G ++ + ++ K ++ PI L
Sbjct: 123 AAGVKVITRYGRTLWDSDAIVKANGGEPTMSMARLRTVGAKVGSIPRPIPAPKAL 177
>UniRef50_Q4T244 Cluster: Chromosome undetermined SCAF10345, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10345,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 662
Score = 177 bits (432), Expect = 4e-43
Identities = 81/146 (55%), Positives = 100/146 (68%), Gaps = 21/146 (14%)
Query: 315 IQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWE 374
+QIPW +N L WAEG+TG+P++DAIM QL+QEGWIHH AR ACFLTRGDLWISWE
Sbjct: 451 LQIPWDQNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHQARRASACFLTRGDLWISWE 510
Query: 375 EGAK---------------------IFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYS 413
G K +FE+ LLD DWS+NAG+WMWLS SAFF ++F+ Y
Sbjct: 511 CGMKVGGPPWSRRRRRRLSARLLPQVFEELLLDADWSVNAGSWMWLSCSAFFQQFFKCYC 570
Query: 414 PVAFGQKTDKEGVYIKKYVPELKKYP 439
PV FG++TD G YI++Y+P LK YP
Sbjct: 571 PVGFGRRTDPSGDYIRRYIPILKDYP 596
Score = 68.5 bits (160), Expect = 3e-10
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD--KVGINRLRFLLQSLEX 65
+HWFR LR+HDN AL+ A++ A++ LR +Y LDP VGINR RFLL++LE
Sbjct: 6 VHWFRKGLRLHDNPALQEALSGADS----LRCVYVLDPWFAGAANVGINRWRFLLEALED 61
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKL 91
+ L+V+RG+ D+ P+L
Sbjct: 62 LDCSLKKLNSRLFVVRGQPTDVFPRL 87
Score = 58.4 bits (135), Expect = 3e-07
Identities = 33/109 (30%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 94 DWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLT 153
+W+V LT + D +P ++D I +A++ GV R HT+Y++ +++ NN + PLT
Sbjct: 126 EWKVTRLTFEYDPEPYGKERDGAIIKMAQQFGVETIVRNSHTLYNLDRIVEMNNNSPPLT 185
Query: 154 YQKFLSLVKSINV-KEPI-EISNVLSSHC-KPI-DIQSENYSIPNLKEL 198
+++F ++V + + + P+ ++ C P+ D + YSIP+L+EL
Sbjct: 186 FKRFQTIVSRLELPRRPLPSVTQQQMDKCGTPVADNHDQLYSIPSLEEL 234
>UniRef50_A5UYV1 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Roseiflexus sp. RS-1|Rep: Deoxyribodipyrimidine
photo-lyase - Roseiflexus sp. RS-1
Length = 491
Score = 173 bits (422), Expect = 6e-42
Identities = 124/446 (27%), Positives = 202/446 (45%), Gaps = 22/446 (4%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQSLEX 65
IHWFR DLR+ DN AL A + R + P++ LD I + G+ R+ F++ +L
Sbjct: 4 IHWFRRDLRLRDNPALSGAAARSGGR---VIPLFILDDAILHAPRTGMARVAFMIAALRD 60
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 125
+ L V RG+ D+L L ++ D P Q+D++IE +
Sbjct: 61 LDASLRARGSRLVVRRGRPSDVLRDLVGATGAVGVSWNRDYTPFARQRDQHIEAMLRDLN 120
Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHC-KPID 184
V + + V R ++G Y + +++ + ++ +P+
Sbjct: 121 VATFIAADAVIMEPDDV-RTDDGRPYTVYTPYRRRWRALVEQRRDDVLRAYEPPVLQPVP 179
Query: 185 IQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSI 244
+ IP+ +L + P GGET RL ++ + +
Sbjct: 180 DGVADLPIPDNPDLDVSVIQRIPA---GGETTGAARLAAFLDPRATHGIAGYADGRNLLA 236
Query: 245 EPSTTVLSPYISHGCLSAKLFYYKL----------KEVENGRQHTLPPVSLMGQLMWREF 294
EP+T+ LSPY+ GC++ + ++ E T + +G+L WR+F
Sbjct: 237 EPATSRLSPYLRFGCVAPRAALRAALNLLDRAGEEQDAECAATLTRSIETWIGELAWRDF 296
Query: 295 YYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 354
YY + + + W + A AW EG+TGYP VDA MRQL +E W+H+
Sbjct: 297 YYQILWHHPHVLRSAFKPQYDALEWENDPALFDAWKEGRTGYPVVDAAMRQLNREAWMHN 356
Query: 355 LARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF-FYKYFRVYS 413
AR +VA FLT+ DL I W G + F L+D D + N G W W + + YFR+++
Sbjct: 357 RARMIVASFLTK-DLLIDWRWGERYFMQQLVDGDHAANNGGWQWSAGTGTDAQPYFRIFN 415
Query: 414 PVAFGQKTDKEGVYIKKYVPELKKYP 439
PV+ GQ D +G Y+++Y+PEL+ P
Sbjct: 416 PVSQGQTFDPKGAYVRRYLPELEAVP 441
>UniRef50_A7SYS9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 524
Score = 170 bits (413), Expect = 7e-41
Identities = 132/457 (28%), Positives = 220/457 (48%), Gaps = 29/457 (6%)
Query: 2 SKTP-TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPN--------IKDKVG 52
SKT TVI R DLR HDN AL A A+ + P+Y DP+ K
Sbjct: 4 SKTQKTVICLLRNDLRYHDNEALLWAHKNAD----FVLPLYCFDPDHYKTTWRFSLPKTA 59
Query: 53 INRLRFLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQ----VKYLTCQVDIDP 108
R +FLL+S+ + L + + + ++ + KL + + V + Q ++
Sbjct: 60 QYRAKFLLESVTDLRSTLQIHGSNLIIRQCQPLEAVTKLTELLKPVAPVTSIVFQQEVTY 119
Query: 109 EFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKE 168
E + ++ + + +K G+ ++ T++ + + VP TY +F K + +
Sbjct: 120 EELNVEKALVEFCKKSGIHMHTIWGSTLFHKDDIPYKAK-TVPDTYTQFR---KGVENQS 175
Query: 169 PIEISNVLSSHCKPID-IQSENYSIPNLKELQIDEETL-----APVKYHGGETEALKRLN 222
+ + + KP+ ++ E +IP+LK L D E + + GGE EAL RL
Sbjct: 176 TVRNLIDMPKNLKPLPPVKGELGTIPDLKSLLNDSEIKEVDQRSAFPFMGGEQEALSRLG 235
Query: 223 LYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPP 282
Y+ + V K+++ + E +T LSP++++G LS ++ Y+++K+ E R
Sbjct: 236 SYLWGTDSVAKYKETRNGLLG-ENYSTKLSPWLANGSLSPRMVYHRIKQYEEERVANHST 294
Query: 283 VSLMGQLMWREFYYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAI 342
++ +L+WR+++ + + +PW + K W EGKTG PFVDA
Sbjct: 295 YWVLFELIWRDYFKFVCLKYGDRVFYRSGIMGKSLPWKHDKMTFKLWCEGKTGVPFVDAN 354
Query: 343 MRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSAS 402
MR+LK+ GW+ + R VA FL + DL + W GA+ FE LLD+D N GNW + +
Sbjct: 355 MRELKETGWMSNRGRQNVASFLIK-DLGLDWRYGAEWFESLLLDHDVCSNYGNWNYAAGI 413
Query: 403 AFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYP 439
+ R ++ V G D +G YIK +VPEL K P
Sbjct: 414 GNDPREGRKFNMVKQGLDYDPDGDYIKTWVPELAKIP 450
>UniRef50_Q3E438 Cluster: DNA photolyase, FAD-binding:DNA
photolyase, N-terminal; n=4; Chloroflexi (class)|Rep:
DNA photolyase, FAD-binding:DNA photolyase, N-terminal -
Chloroflexus aurantiacus J-10-fl
Length = 534
Score = 169 bits (411), Expect = 1e-40
Identities = 125/435 (28%), Positives = 195/435 (44%), Gaps = 20/435 (4%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDK--VGINRLRFLLQSLEX 65
IHWFR DLR+ DN AL A A + P++ D I R +FLL L
Sbjct: 58 IHWFRRDLRLRDNTALMAAATAAGGA---VVPVFIFDDAILRGRFASPARTQFLLDCLAA 114
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 125
L V RG + L + + +T D P V++D I+ + G
Sbjct: 115 LDAELRTFGLHLVVRRGDPLRTLFDVLRESGASGVTWNRDYTPYAVRRDTAIKQALREAG 174
Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDI 185
+ ++++ +V + G Y + +S EP+ + ++ P+ +
Sbjct: 175 YEAHSFKDTVIFEMKEVATAD-GRPYTVYTPYAKRWRSRLAAEPVTVQDMPRLATIPLPV 233
Query: 186 QSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIE 245
+P+L +L D P ++ GE AL+ L ++ + + +
Sbjct: 234 SEP---LPHLTDLLPDAPATLP-RFPAGEAVALEALERFVRGP--LASYAQGRDL--MAV 285
Query: 246 PSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANF 305
T+ LSPY+ G LS + G P S +G+L+WR+FY +
Sbjct: 286 AGTSRLSPYLRLGVLSPRQCVAAALAAPPGPG----PESWIGELIWRDFYVQVLYHFPHA 341
Query: 306 DKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLT 365
+ +I W + AW +G TGYP VDA MRQL++EGW+H+ AR +VA FLT
Sbjct: 342 LRGSFKPAYNRIDWPNDPVLFAAWQQGLTGYPIVDAAMRQLQREGWMHNRARMIVASFLT 401
Query: 366 RGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF-FYKYFRVYSPVAFGQKTDKE 424
+ DL I W G + F L+D D + N G W W + + +FR+++PV+ GQK D E
Sbjct: 402 K-DLLIDWRWGERHFMHLLIDGDPAANNGGWQWAAGTGTDAQPFFRIFNPVSQGQKFDPE 460
Query: 425 GVYIKKYVPELKKYP 439
G Y+++YVPEL P
Sbjct: 461 GAYVRRYVPELVNVP 475
>UniRef50_Q6HWS5 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=8; Bacillus cereus group|Rep:
Deoxyribodipyrimidine photolyase family protein -
Bacillus anthracis
Length = 476
Score = 168 bits (408), Expect = 3e-40
Identities = 122/441 (27%), Positives = 208/441 (47%), Gaps = 24/441 (5%)
Query: 7 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXX 66
+I F+ D R++DN AL A E + P+Y D +G +L ++
Sbjct: 5 IIVMFQKDFRLYDNPALFEAAQSGE-----VVPVYVHDETFS--MGSASKWWLHHAIIDV 57
Query: 67 XXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGV 126
+ L + +G + + L + + + + DP+ +Q ++ ++ + E KG+
Sbjct: 58 KKQLEALGSTLIIRKGSTQEEILSLVEQLGITAVYWNICYDPDRLQSNQKMKMMLEHKGM 117
Query: 127 FINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQ 186
+ H + + + +++N + + + K + K ++ ++ + P+ +
Sbjct: 118 ICKEFNSHLLLEPWVIKKKDNTEYKVFTPFYNAFQKQVIHKPISKVQSIKGGNSLPVSLS 177
Query: 187 -SENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIE 245
SE + +P + E P E A K + S K + + + PN +
Sbjct: 178 VSELHLLPTIPWTSHMESIWEPT-----EEGAYKTWKEFFSSK--LASYSEGRDFPN--Q 228
Query: 246 PSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTL---PPVSLMGQLMWREF-YYTAGTG 301
+ ++L+PY+S G +S KL Y+ L Q +L S + QL+WREF YY
Sbjct: 229 NAHSMLAPYLSFGQISVKLIYHYLINKSTESQCSLFEKQVNSFIRQLIWREFSYYLLYHY 288
Query: 302 VANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVA 361
K + + PW + L+ W +G TGYPF+DA MR+L Q G++H+ R VA
Sbjct: 289 PFTAYKPLNKSF-EHFPWNNEEELLRVWQKGDTGYPFIDAGMRELWQTGFMHNRTRMAVA 347
Query: 362 CFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSAS-AFFYKYFRVYSPVAFGQK 420
FL + L I W+EGAK F D LLD D + N W W++ S A YFR+++P+ G+K
Sbjct: 348 SFLVK-HLLIPWQEGAKWFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEK 406
Query: 421 TDKEGVYIKKYVPELKKYPRE 441
DK G YI+K+VPELK P +
Sbjct: 407 FDKNGEYIRKWVPELKDMPNK 427
>UniRef50_Q116U8 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Trichodesmium erythraeum IMS101|Rep:
Deoxyribodipyrimidine photolyase - Trichodesmium
erythraeum (strain IMS101)
Length = 474
Score = 167 bits (405), Expect = 7e-40
Identities = 117/440 (26%), Positives = 213/440 (48%), Gaps = 25/440 (5%)
Query: 7 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQSLE 64
++ W R DLRI DN+ L A E + + I+ LD NI +D + R+ +++ L+
Sbjct: 5 ILFWHRRDLRISDNVGLTQASQEGQT----VVGIFCLDENILKRDDIASARVTYMIGCLQ 60
Query: 65 XXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 124
+ L ++ GK ++ +PKL + K + +D++P ++D +++ E
Sbjct: 61 HLQKRYKQIGSQLLIMSGKPIEAIPKLATFLEAKAVYWNLDVEPYSRKRDRQVKENLEAA 120
Query: 125 GVFIN---KRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPI--EISNVLSSH 179
+ + +++ H+ ++ ++ ++ + KS + P+ ++ +
Sbjct: 121 NIQVKTFWEQLLHSPEEIFTSTKKPYSVYTPFWKNWQGKKKSNPLNTPVLKGLTEDQLQY 180
Query: 180 CKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNS 239
K I + +P K+L + + ++ GET AL++L + + + +++ +
Sbjct: 181 TKKIGV----IDLPTAKQLGFNWDNKLILE--PGETAALEKLEKFSNGA--ISSYQEQRN 232
Query: 240 SPNSIEPSTTVLSPYISHGCLSAKLFYYKLKE-VENGRQHTLPP--VSLMGQLMWREFYY 296
P S++ T+ LS + G + + + K +E +EN + + ++ WREFY
Sbjct: 233 FP-SLD-GTSQLSVALKFGTIGIRTVWAKTQELIENCYSSEVFENIETWQKEIAWREFYQ 290
Query: 297 TAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLA 356
+ PW N A +AW EG TGYP VDA MRQL + GW+H+
Sbjct: 291 YVMYHYPELETGPYREHWKNFPWKNNKAHFQAWCEGNTGYPIVDAAMRQLNETGWMHNRC 350
Query: 357 RHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVA 416
R +VA FLT+ DL I+W+ G K F L+D D N G W W ++S K R+++PV+
Sbjct: 351 RMIVASFLTK-DLIINWQWGEKYFMQNLIDGDLCANNGGWQWSASSGMDPKPLRIFNPVS 409
Query: 417 FGQKTDKEGVYIKKYVPELK 436
QK D EG YI+++V EL+
Sbjct: 410 QTQKYDPEGEYIRQWVCELR 429
>UniRef50_A4M6R0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Petrotoga mobilis SJ95|Rep: Deoxyribodipyrimidine
photo-lyase - Petrotoga mobilis SJ95
Length = 462
Score = 166 bits (403), Expect = 1e-39
Identities = 131/435 (30%), Positives = 209/435 (48%), Gaps = 37/435 (8%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDK--VGINRLRFLLQSLEX 65
+H FR DLR+ DN +L A+ E ++ F D IKD N ++F++ L+
Sbjct: 19 LHIFRRDLRLEDNTSLIEALQSCER---VIPAFIFDDRQIKDNDYKSDNAVQFMIACLKE 75
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 125
LY G ++ L ++ + D P ++D I+ I E++
Sbjct: 76 LNDQLHQLNARLYFFEGLTAKVVESLIKTLGIEAVFVNKDYTPFSKKRDNEIKAICERER 135
Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDI 185
V + +++ +VL++N G + + FL K I+V+EP + N ++ +I
Sbjct: 136 VDFKEHFDVLLHEPTEVLKDN-GMPYIKFTDFLKKSKKIDVREPQK--NKFKNYFTE-EI 191
Query: 186 QSENYSIPNLKELQIDE-ETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSI 244
S SI LQ+D+ + GG E L + + K + + ++P SI
Sbjct: 192 SS---SIA----LQVDKFPQNENLILKGGRKEGLSYIERIVKLKN----YSETRNTP-SI 239
Query: 245 EPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVAN 304
+ TT LSP++ G +S + Y K+ E G +H ++ QL WR+F+ + +
Sbjct: 240 D-GTTKLSPHLKFGTVSVREVYGKVNE-NFGNEH-----EIITQLHWRDFFTHI---LYH 289
Query: 305 FDKMVGNAI---CIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVA 361
F ++GN+ QI W + KAW G+TGYP VDA MRQL GW+H+ R +
Sbjct: 290 FPHVLGNSFKEKYNQIQWENDVDKFKAWCTGRTGYPIVDAGMRQLNLTGWMHNRVRMITG 349
Query: 362 CFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWL-SASAFFYKYFRVYSPVAFGQK 420
FL + DL I W G K F L+DYD ++N GNW W+ S +FR+++P+ QK
Sbjct: 350 SFLVK-DLHIDWRWGEKYFAQRLVDYDPAINNGNWQWVASTGCDAQPFFRIFNPILQQQK 408
Query: 421 TDKEGVYIKKYVPEL 435
D E YIK ++PEL
Sbjct: 409 FDPECNYIKTWLPEL 423
>UniRef50_Q4KML2 Cluster: Cryptochrome DASH; n=11; cellular
organisms|Rep: Cryptochrome DASH - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 520
Score = 164 bits (398), Expect = 5e-39
Identities = 123/446 (27%), Positives = 208/446 (46%), Gaps = 17/446 (3%)
Query: 1 MSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD--------KVG 52
MS + TVI R DLR+HDN A AE H++ P+Y DP K G
Sbjct: 1 MSASRTVICLLRNDLRLHDNEVFHWAQRNAE---HII-PLYCFDPRHYQGTYHYNFPKTG 56
Query: 53 INRLRFLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDW-QVKYLTCQVDIDPEFV 111
RLRFLL S++ + L V +GK D++ +L V + ++ E
Sbjct: 57 PFRLRFLLDSVKDLRALLKKHGSTLLVRQGKPEDVVCELIKQLGSVSTVAFHEEVASEEK 116
Query: 112 QQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIE 171
+E +++I + V + T+Y + + G +P Y +F V++ P+
Sbjct: 117 SVEEKLKEICCQNKVRVQTFWGSTLYHRDDLPFSHIGGLPDVYTQFRKAVEAQGRVRPV- 175
Query: 172 ISNVLSSHCKPIDIQSENY-SIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEW 230
+S P ++ + +L + + ++ + GGETEAL RL Y
Sbjct: 176 LSTPEQVKSPPSGLEEGPIPTFDSLGQTEPLDDCRSAFPCRGGETEALARLKHYFWDTNA 235
Query: 231 VCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLM 290
V +++ + ++ ST SP+++ GC+S + Y ++K+ E R ++ +L+
Sbjct: 236 VATYKETRNGMIGVDFSTK-FSPWLALGCISPRYIYEQIKKYEVERTANQSTYWVIFELL 294
Query: 291 WREFYYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEG 350
WR+++ N + +PW + AW EG+TG PFVDA MR+L G
Sbjct: 295 WRDYFKFVALKYGNRIFYMNGLQDKHVPWNTDMKMFDAWKEGRTGVPFVDANMRELALTG 354
Query: 351 WIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFR 410
++ + R VA FLT+ DL + W GA+ FE L+D+D N GNW++ + + R
Sbjct: 355 FMSNRGRQNVASFLTK-DLGLDWRLGAEWFEYLLVDHDVCSNYGNWLYSAGIGNDPRENR 413
Query: 411 VYSPVAFGQKTDKEGVYIKKYVPELK 436
++ + G D G Y++++VPEL+
Sbjct: 414 KFNMIKQGLDYDNNGDYVRQWVPELR 439
>UniRef50_Q4T243 Cluster: Chromosome undetermined SCAF10345, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF10345, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 642
Score = 163 bits (397), Expect = 6e-39
Identities = 87/229 (37%), Positives = 136/229 (59%), Gaps = 5/229 (2%)
Query: 94 DWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLT 153
+W+V LT + D ++D I +A++ GV R HT+Y++ +++ NN + PLT
Sbjct: 126 EWKVTRLTFEYDPRAYGKERDGAIIKMAQQFGVETIVRNSHTLYNLDRIVEMNNNSPPLT 185
Query: 154 YQKFLSLVKSINV-KEPI-EISNVLSSHC-KPI-DIQSENYSIPNLKELQIDEETLAPVK 209
+++F ++V + + + P+ ++ C P+ D + YSIP+L+EL LAP
Sbjct: 186 FKRFQTIVSRLELPRRPLPSVTQQQMDKCGTPVADNHDQLYSIPSLEELGFRTGGLAPAV 245
Query: 210 YHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKL 269
+ GGE+EAL+RL ++ KK WV E ++ S+ S LSPY+ GCLS ++FYY L
Sbjct: 246 WRGGESEALERLRKHLEKKVWVSHLEHSRANTCSLYASPAGLSPYLRFGCLSCRVFYYNL 305
Query: 270 KE-VENGRQHTLPPVSLMGQLMWREFYYTAGTGVANFDKMVGNAICIQI 317
+E + PP+SL GQL+WREF+YTA T NFD+M GN IC+Q+
Sbjct: 306 REHYIRLCKGCSPPLSLFGQLLWREFFYTAATNNPNFDRMAGNPICVQV 354
Score = 116 bits (278), Expect = 2e-24
Identities = 56/105 (53%), Positives = 68/105 (64%), Gaps = 21/105 (20%)
Query: 356 ARHMVACFLTRGDLWISWEEGAKI---------------------FEDYLLDYDWSLNAG 394
AR VACFLTRGDLWISWE G K+ FE+ LLD DWS+NAG
Sbjct: 453 ARRAVACFLTRGDLWISWECGMKVGGAAWSRRRRRRLSARLLPQVFEELLLDADWSVNAG 512
Query: 395 NWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYP 439
+WMWLS SAFF ++F+ Y PV FG++TD G YI++Y+P LK YP
Sbjct: 513 SWMWLSCSAFFQQFFKCYCPVGFGRRTDPSGDYIRRYIPILKDYP 557
Score = 68.5 bits (160), Expect = 3e-10
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD--KVGINRLRFLLQSLEX 65
+HWFR LR+HDN AL+ A++ A++ LR +Y LDP VGINR RFLL++LE
Sbjct: 6 VHWFRKGLRLHDNPALQEALSGADS----LRCVYVLDPWFAGAANVGINRWRFLLEALED 61
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKL 91
+ L+V+RG+ D+ P+L
Sbjct: 62 LDCSLKKLNSRLFVVRGQPTDVFPRL 87
>UniRef50_Q41CV5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Exiguobacterium sibiricum 255-15|Rep:
Deoxyribodipyrimidine photolyase - Exiguobacterium
sibiricum 255-15
Length = 451
Score = 163 bits (396), Expect = 8e-39
Identities = 117/441 (26%), Positives = 220/441 (49%), Gaps = 34/441 (7%)
Query: 7 VIHWFRLDLRIHDNLALRNAINEAENRKHL-LRPIYFLDPNIKDKVGINRLRFLLQSLEX 65
+I W R D R+ DN L A+ E + + +++++P+ + R ++ Q+LE
Sbjct: 3 IICWIRSDFRLEDNHMLARAVEYLEKDEQANVEFVFWVNPDYIGEYDA-RQQYFFQALEH 61
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIED-IAEKK 124
+ + G+ D L + + + + E+V+ + +D I +K+
Sbjct: 62 FAKNCKTHDMPIRFIEGQEKDFL-------EATEMADVLLFNAEYVEPFKSRDDGIMKKR 114
Query: 125 GVFINKRV--QHTVYDVHKVLRENNGAVPLTYQKFLS--LVKSINVKEPIEISNVLSSHC 180
G +R+ +H ++ H V ++N+G+ + + + L K ++ P++++ + +
Sbjct: 115 GDKKTERLLDRHLLHP-HAV-KKNDGSYYKVFTPYKNAFLKKDVDKPYPVKLNLLKERYH 172
Query: 181 KPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSS 240
K Q+ + + K D + + GE A KRL ++ K + +E+
Sbjct: 173 KRR--QNNAFMLDYFKRAASDTD------FAVGEETARKRLRSFL--KNNLSAYEEQRDL 222
Query: 241 PNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGT 300
P +++ T+++S Y+ G + + + +++ ++ + + + +L+WREFYYT
Sbjct: 223 P-AVD-GTSLMSRYLRTGEIGIRTIFDAVQQEQDSKGKQ----TYLTELIWREFYYTILM 276
Query: 301 GVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMV 360
++ N +I W ++ KAWAEGKTGYP VDA MRQL GW+H+ R +V
Sbjct: 277 HYPESKRLPVNEQYTKIEWETDEKGFKAWAEGKTGYPIVDAAMRQLNTTGWMHNRLRMIV 336
Query: 361 ACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW-LSASAFFYKYFRVYSPVAFGQ 419
A FLT+ DL + W++G + F+ L+DY+ + N G W W S YFRV++P +
Sbjct: 337 ASFLTK-DLLVDWQKGERYFQQKLVDYEAASNIGGWQWAASVGTDAVPYFRVFNPTTQSK 395
Query: 420 KTDKEGVYIKKYVPELKKYPR 440
K DK+G +I+ Y+PELK P+
Sbjct: 396 KFDKDGTFIRTYLPELKDLPK 416
>UniRef50_Q83CE4 Cluster: Deoxyribodipyrimidine photolyase-class I;
n=4; Coxiella burnetii|Rep: Deoxyribodipyrimidine
photolyase-class I - Coxiella burnetii
Length = 472
Score = 162 bits (393), Expect = 2e-38
Identities = 131/443 (29%), Positives = 209/443 (47%), Gaps = 32/443 (7%)
Query: 6 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEX 65
T I WFR DLR+ DN AL A A+ HL+ P+Y LD +K +G + +L SL
Sbjct: 2 TTIFWFRQDLRLSDNPALVEAAKSAD---HLI-PLYILDDQLK-MLGDAQRWWLHHSLSS 56
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 125
T L + +G +L +L ++V+ + +P + + D Y+E+
Sbjct: 57 LQTALSKKGTSLILKKGDTKRVLLELIKKYKVEKIYWNRSYEPPYREIDTYLENRLPPLS 116
Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDI 185
V I T + K+ ++ G + + + S+ ++ + S H I
Sbjct: 117 VEIYHSTLLT--EPQKIKNKSGGYYKIFTPFWKHINASLQPRKTLAAPKKFSQHRA---I 171
Query: 186 QSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSK--KEWVCKFEKPNSSPNS 243
+S+N NL D ++ GE A L ++ + K + ++P+ S
Sbjct: 172 KSDNLETWNLLPKHPDWSQGFD-QWKPGEKNAQIVLKKFIKENLKNYPAHRDRPDIS--- 227
Query: 244 IEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSL-MGQLMWREF-YYTAG-- 299
ST+ LSPY+ G +S + + + + ++ + + QL+WREF YY
Sbjct: 228 ---STSHLSPYLHFGEISIRQVWTAITQATIQDKNLQKAADVFLRQLIWREFAYYLLWHF 284
Query: 300 --TGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLAR 357
G +NF N W KN +L+AW +G TGYP VDA MR+L G++H+ R
Sbjct: 285 PQMGRSNFRNQFDN-----FKWKKNKNWLRAWQKGLTGYPIVDAGMRELWCTGYMHNRVR 339
Query: 358 HMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS-ASAFFYKYFRVYSPVA 416
+VA FL + DL I W EG K F + LLD D + NA W W++ YFR+++P+
Sbjct: 340 MIVASFLVK-DLMIDWREGEKWFWNTLLDADLANNALGWQWIAGCGPDAAPYFRIFNPIL 398
Query: 417 FGQKTDKEGVYIKKYVPELKKYP 439
+K D +G YIK+++PEL K P
Sbjct: 399 QSKKFDPDGTYIKRWIPELAKVP 421
>UniRef50_Q12TR5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Methanococcoides burtonii DSM 6242|Rep:
Deoxyribodipyrimidine photolyase - Methanococcoides
burtonii (strain DSM 6242)
Length = 467
Score = 162 bits (393), Expect = 2e-38
Identities = 126/433 (29%), Positives = 205/433 (47%), Gaps = 31/433 (7%)
Query: 11 FRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVG----INRLRFLLQSLEXX 66
FR D+R+ DN AL A++ ++ ++ P + LDP + D G N L+FLL+SL
Sbjct: 12 FRRDMRVDDNSALLAALDMSD----VVIPCFILDPRLCDPKGKAFNSNALQFLLESLYDL 67
Query: 67 XXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGV 126
LY+ G ++ +L ++ ++ + D P +++D I I KGV
Sbjct: 68 KGQLEKVNGRLYLFSGLPEGVIGQLLENLEIDAVFVNHDYTPFSIKRDMQIASICTDKGV 127
Query: 127 FINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEIS--NVLSSHCKPID 184
+ + +++ + R G + +F +V P S + + C +
Sbjct: 128 DMLQFHDCLLHEPGSI-RTKKGTPYKVFTQFFREASKRDVAVPSMFSGGSFFTGDCGVDE 186
Query: 185 IQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSI 244
+ ++ +L E +E+ HGG L L S ++V ++ P S+
Sbjct: 187 VDEGSFLKRSLPER--NEQIFV----HGGRANGLSVLQ---SLSQFV-NYDTERDLP-SV 235
Query: 245 EPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVAN 304
+ TT LS + G +S + FYY + + E GR HTL + +L WR+F+ +
Sbjct: 236 K-GTTGLSAHNKLGTISIREFYYSVID-ELGRGHTL-----INELYWRDFFTQISFEFPD 288
Query: 305 FDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFL 364
K + W + F AW GKTG+P VDA MR+L G++H+ R +VA FL
Sbjct: 289 VFKHAFKKKFDHLSWDNDRIFFDAWCLGKTGFPIVDAGMRELNTTGYMHNRVRMIVASFL 348
Query: 365 TRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW-LSASAFFYKYFRVYSPVAFGQKTDK 423
+ DL I W+ G + F L+DYD +N GNW W S A YFR+++P +K DK
Sbjct: 349 VK-DLHIDWKRGERYFASKLVDYDPCVNNGNWQWAASTGADSQPYFRIFNPWLQQKKFDK 407
Query: 424 EGVYIKKYVPELK 436
+ YIKK++PEL+
Sbjct: 408 DCKYIKKWIPELE 420
>UniRef50_Q1RKC7 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;
Rickettsia bellii|Rep: Deoxyribodipyrimidine photo-lyase
- Rickettsia bellii (strain RML369-C)
Length = 475
Score = 158 bits (383), Expect = 3e-37
Identities = 113/446 (25%), Positives = 207/446 (46%), Gaps = 22/446 (4%)
Query: 1 MSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGI---NRLR 57
M+KT V W R +LR+HDN + A+ ++ + PI+ D I ++ RL
Sbjct: 1 MNKTSIV--WLRRNLRLHDNKSFAAALRNSDK----ILPIFIFDTTILERFKNPHDRRLS 54
Query: 58 FLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYI 117
FL +L L V GK +D++PKL +++ + D +P +++D+ +
Sbjct: 55 FLANTLCLINDELKKLKGKLLVFYGKPLDIIPKLAATLKIENIYADEDYEPNNIERDKKV 114
Query: 118 EDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLS 177
+++ +N H + +VL ++N A + + K I I + +L+
Sbjct: 115 QELLGSNCT-LNLYCDHLLIKPDRVLTKDNKAYKVYTPYMQAFRKFIADNGSISHNKLLT 173
Query: 178 SHCKPIDIQSENYSIPNLKELQID---EETLAPVKYHGGETEALKRLNLYMSKKEWVCK- 233
++ +D + LK + ++ E L + Y E E + N +++ +
Sbjct: 174 NYSYNLDGKLYTPQDIELKTIDLNIGKSEALKQIGYVYKEDELWQPKNAQNVLDKFITRR 233
Query: 234 FEKPNSSPNSIE-PSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWR 292
+ + + T+ +SPY+ G +S + Y K + ++ + +L+WR
Sbjct: 234 INRYKIDQDFLYLDGTSTISPYLRFGLVSIRECYRKAFNAASNPGS----ITWINELIWR 289
Query: 293 EFYYTAGTGVAN-FDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGW 351
EFY T N ++ +IPW + + +TGYP +DA ++QL +GW
Sbjct: 290 EFYATILYHFPNTVNEEFLEKYKNKIPWNNKKEYFDKFINAETGYPIIDAAVKQLVGDGW 349
Query: 352 IHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSA-SAFFYKYFR 410
+H+ AR +VA F ++ +L + W +G + F YL+DY+ + N G W W S+ YFR
Sbjct: 350 MHNRARMIVASFFSK-NLLLDWRKGEEFFAQYLMDYELASNVGGWQWASSCGTDAQPYFR 408
Query: 411 VYSPVAFGQKTDKEGVYIKKYVPELK 436
+++P G+ D + YIKKY+P LK
Sbjct: 409 IFNPYTQGKNFDPDAEYIKKYLPILK 434
>UniRef50_Q4FL16 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Pelagibacter ubique
Length = 473
Score = 155 bits (377), Expect = 2e-36
Identities = 127/443 (28%), Positives = 209/443 (47%), Gaps = 24/443 (5%)
Query: 4 TPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSL 63
T I W R D RI N AL A +N +++ IY +P DK + +L +SL
Sbjct: 2 TKKAIVWIREDFRIEYNEALATA---TQNHEYV-SAIYIYNPKNFDKKREAQKWWLSKSL 57
Query: 64 EXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEK 123
E L V G +++L L V +V +P+ + + + I D+ K
Sbjct: 58 ENLSIDLKKLNITLEVQLGDELEVLSILKKKDDVTVYWSKV-YEPDVINKGKKIRDLFIK 116
Query: 124 KGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINV-KEPIEISNVLSSHCKP 182
+ K + + + + +++G + F + + K P ++ V S K
Sbjct: 117 NEIQY-KYFKGNILVEFQEMTKDDGTPYKVFTPFWKKTEQHYISKAPSKLIRV-KSKIKK 174
Query: 183 IDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPN 242
I+I + SI + + + + E EA K L ++ K + + P
Sbjct: 175 INIFKNSISIKEILPKKNWHKKFEKY-WDPSEKEAKKYLQELINNK--IEDYGDARDIPG 231
Query: 243 SIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGV 302
T+ LSP++ G + + + K ++++ + + + +L WREF ++ +
Sbjct: 232 V--NGTSKLSPFLKFGQIHVETIWKKCQDIKVKK---IGYRKYINELGWREFSHSL---I 283
Query: 303 ANFDKMV-GNAI--CIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHM 359
F +M+ GN PW KND FLKAW G TGYP VDA MR+L + GW+H+ R +
Sbjct: 284 NYFPQMLKGNLRKDFDNFPWVKNDKFLKAWKAGMTGYPIVDAGMRELYETGWMHNRVRMI 343
Query: 360 VACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS-ASAFFYKYFRVYSPVAFG 418
VA FL + L I W EG K F++ L+DY+ + N W W++ A YFR+++P+ G
Sbjct: 344 VASFLVK-HLRIHWMEGEKHFKNCLVDYNEASNVAQWQWVAGCGADAAPYFRIFNPILQG 402
Query: 419 QKTDKEGVYIKKYVPELKKYPRE 441
+K DK+G+Y KK+VPELK P +
Sbjct: 403 EKFDKDGIYTKKWVPELKNMPNK 425
>UniRef50_Q46H89 Cluster: Deoxyribodipyrimidine photolyase; n=7;
Prochlorococcus marinus|Rep: Deoxyribodipyrimidine
photolyase - Prochlorococcus marinus (strain NATL2A)
Length = 493
Score = 154 bits (374), Expect = 4e-36
Identities = 129/457 (28%), Positives = 214/457 (46%), Gaps = 42/457 (9%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLR------FLLQ 61
I W R DLR DN+ L A ++N K L+ +Y LDP + D +NR FL +
Sbjct: 7 IFWHRRDLRFGDNIGLFEA---SKNSKSLIG-VYVLDPKLLD---LNRTTSEAKNWFLGE 59
Query: 62 SLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIA 121
SL + L +L G ++L+ KL + + + +I+P + +D+ I +
Sbjct: 60 SLIELQKNWEIRGSRLLILNGDPIELISKLAELVHAECIYWNENIEPYEINRDKQIAEKL 119
Query: 122 EKKGVFINKRVQHTVYDVHKVLRENNGAVPLT---YQKFLSLV---KSI--NVKEPIEIS 173
K+ + + + + + N+ + Y+K++ L+ KS N+ + E +
Sbjct: 120 SKEKRKVYTFLDQLIVNPSNIKTNNDEPYKVYGPFYRKWIDLINITKSSENNLIQTSETA 179
Query: 174 NVLSS----HCKPIDIQSENYSIPN----LKEL----QIDEETLAPVKYHGGETEALKRL 221
L+ I NY I N + EL + ++ L P K GE+E++K+L
Sbjct: 180 KQLTGLNERELSSIKNSDLNYCITNKSKSIYELLSLNRFNKTNLCPCK--PGESESIKQL 237
Query: 222 NLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLP 281
N ++ + + K P S+E +T+ LS +S G +S ++ + + +N
Sbjct: 238 NSFIHSGV-INSYNKARDIP-SLE-NTSHLSAALSLGTISCRVVWNGAQVSKNATDDEYK 294
Query: 282 PVSL---MGQLMWREFYYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPF 338
S+ + +L WREFY A +K + PW + +AW +G TG P
Sbjct: 295 INSIDTWIKELAWREFYQNALINFPELEKGPYREKWLDFPWQNRPDWFEAWGDGLTGIPI 354
Query: 339 VDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW 398
+DA MRQLK GW+H+ R +VA FL + DL I W G F L+D D + N G W W
Sbjct: 355 IDAAMRQLKCSGWMHNRCRMIVASFLVK-DLLIDWRLGELFFMKSLVDGDLAANNGGWQW 413
Query: 399 LSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPEL 435
++S K R+++P K D++G YI+K++PEL
Sbjct: 414 SASSGMDPKPMRIFNPFRQASKFDEDGEYIRKWIPEL 450
>UniRef50_Q834P4 Cluster: Deoxyribodipyrimidine photolyase; n=14;
Bacilli|Rep: Deoxyribodipyrimidine photolyase -
Enterococcus faecalis (Streptococcus faecalis)
Length = 477
Score = 153 bits (372), Expect = 7e-36
Identities = 119/438 (27%), Positives = 197/438 (44%), Gaps = 30/438 (6%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPN--IKDKVGINRLRFLLQSLEXXX 67
WFR DLR+ DN AL +A+ + + +L ++ ++P I++ N L S +
Sbjct: 6 WFRRDLRLQDNKALAHALQNSAADELIL--LFQMNPQQFIQESANHNAFFASLASFKERI 63
Query: 68 XXXXXXXTCLYVLRGKAVDLLPKL---FDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 124
L ++ G+ +DL +L DWQ Y D ++D+ E+
Sbjct: 64 DQEAH----LQIMVGEPLDLFSRLKRKLPDWQAIYFN--EDTCGFGAKRDQQAMRFFEEN 117
Query: 125 GVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPID 184
+ + Q + +++N+G+ + + + K + PI +S
Sbjct: 118 NIQ-SFSFQDAYLHGSEEIKKNDGSKYQVFTPYYNKWKEAPKETPIPVSYTAEKIFSACL 176
Query: 185 IQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSI 244
E + QI L Y GE A +RLN ++ +K + +E P
Sbjct: 177 FPEEEAAYRE----QIARIPLT--HYSVGEETARRRLNTFIDQK--LQSYENKRDFP--Y 226
Query: 245 EPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVAN 304
+ T+ LS ++ G LS + + +L V + +L + +L WR+FY +
Sbjct: 227 QDQTSHLSTFLRTGELSIRTIWQELASVPS----SLSKETFKKELAWRDFYNMIYSAFPQ 282
Query: 305 FDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFL 364
+ I WT + W +G+TGYP +DA MRQL Q GW+H+ R + A FL
Sbjct: 283 QKEEAIQEKFRYIQWTNDPEMFVKWQKGETGYPIIDAAMRQLNQTGWMHNRLRMITASFL 342
Query: 365 TRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW-LSASAFFYKYFRVYSPVAFGQKTDK 423
+ +L I W G K F+ L+DYD + N G W W S YFR+++P+ +K D
Sbjct: 343 VK-NLHIDWRWGEKYFQKMLIDYDAANNIGGWQWAASTGTDAVPYFRIFNPIIQSKKFDN 401
Query: 424 EGVYIKKYVPELKKYPRE 441
+G +IKKYVPELK+ P++
Sbjct: 402 DGQFIKKYVPELKQVPQK 419
>UniRef50_Q6FCZ9 Cluster: Deoxyribodipyrimidine photolyase
(Photoreactivation), FAD-binding; n=2;
Acinetobacter|Rep: Deoxyribodipyrimidine photolyase
(Photoreactivation), FAD-binding - Acinetobacter sp.
(strain ADP1)
Length = 477
Score = 153 bits (370), Expect = 1e-35
Identities = 125/444 (28%), Positives = 212/444 (47%), Gaps = 34/444 (7%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHL-LRPIYFL---DPNIKDKVGINRLRFLLQSLEX 65
WFR DLR++D+ AL +A + L P+ + D IK + +L L Q L
Sbjct: 6 WFRNDLRLNDHAALWHATQAGSTIAFVALSPLQWQQHDDAIIKIDFYMRQLTQLKQELNT 65
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 125
L+ + A +++ + D + ++ + ++ +++D +++ K G
Sbjct: 66 INIPLIVQIIPLW--KDIATEII-SISDRYHIQDVYANIETGINEIERDHAVQEALSKIG 122
Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPI-- 183
+ T++ + + N P YQ F K+ + I+I K
Sbjct: 123 KNLILFHDKTLFPLGSI--RNKSQAP--YQVFTPFKKTCYERLNIDIPKCFPYPHKQKQQ 178
Query: 184 -DIQSENYSIPNLKEL---QIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNS 239
+I + +IP+LK+L QID+ ++ GET AL L + K + ++ +
Sbjct: 179 PEIAKKEAAIPSLKQLGYSQIDQHIQN--EWPIGETFALNLLEDFTQDK--INRYHESRD 234
Query: 240 SPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGR--QHTLPPVSLMGQLMWREFYYT 297
P + T+ +S Y++ G LS + + + ++G+ + + +L+WREFY
Sbjct: 235 YP--AQDGTSHISAYLTIGILSIRQCIQAIFQKQHGQFFLNNKGQEIWLNELLWREFYQQ 292
Query: 298 AGTGVANFDKMVGNAI----CIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 353
+ +F K+ + IPW +ND +AW +GKTG P VDA MRQLK GW+H
Sbjct: 293 L---LFDFPKLSRHQPFQDHTKNIPWNENDEHFEAWIQGKTGIPIVDAGMRQLKATGWMH 349
Query: 354 HLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW-LSASAFFYKYFRVY 412
+ R + A FL++ +L I W +G K F +L+D D + N G W W S YFR++
Sbjct: 350 NRVRMICAMFLSK-NLLIDWRKGEKWFMQHLIDGDLAANDGGWQWSASTGTDASPYFRIF 408
Query: 413 SPVAFGQKTDKEGVYIKKYVPELK 436
+PV QK D EGV++KK++PELK
Sbjct: 409 NPVTQSQKFDPEGVFLKKWIPELK 432
>UniRef50_Q55081 Cluster: Deoxyribodipyrimidine photo-lyase; n=15;
Cyanobacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Synechocystis sp. (strain PCC 6803)
Length = 488
Score = 152 bits (368), Expect = 2e-35
Identities = 117/445 (26%), Positives = 211/445 (47%), Gaps = 20/445 (4%)
Query: 2 SKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFL 59
S P ++ W R DLR++D+LAL +A + + ++ LD I + + R+ +L
Sbjct: 14 SDHPLILLWHRRDLRLNDHLALA----KARQKTAKIVGVFCLDNKILQAEDMAPARVAYL 69
Query: 60 LQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIED 119
L L+ + L V + V LLPKL + +T +D +P ++D +
Sbjct: 70 LGCLQSLQDHYQRLGSELLVFQADPVQLLPKLANTLGAHGVTWTLDTEPYAQKRDLAVAQ 129
Query: 120 IAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLT---YQKFLSLVKSINVKEPIEISNVL 176
++G+ I ++ +VL + + ++ + L K+ V P ++ +
Sbjct: 130 ALRERGLAIATEWDQLMHHPGEVLTQAGSPYTVYTPFWKNWSQLPKTSPVPTPKDLQGLT 189
Query: 177 SSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEK 236
+ + + E +IP L +L + P+ GE A +RL+ +++ + ++++
Sbjct: 190 PAEKEKL-APLEPLAIPQLADLGFIWDQ--PLPLTPGEEAAEQRLDWFVA--HGLEEYQQ 244
Query: 237 PNSSPNSIEPSTTVLSPYISHGCLSAK-LFYYKLKEVENGR-QHTLPPVSLMGQ-LMWRE 293
+ P +++ T+ LS + G +S + L+ L+ E R + + Q L WRE
Sbjct: 245 NRNFP-ALD-GTSQLSAALKFGVISPRTLWQTTLEAWEQSRSEEARASIETWQQELAWRE 302
Query: 294 FYYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 353
FY + + + PW +N +AW EG+TGYP +DA M QL Q GW+H
Sbjct: 303 FYQHCLYSFPALAQGPYRSPFQEFPWEENQDHFQAWCEGRTGYPIIDAAMAQLNQTGWMH 362
Query: 354 HLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYS 413
+ R +VA FL + DL ++W+ G F L D D + N G W W ++S K R+++
Sbjct: 363 NRCRMIVASFLIK-DLILNWQWGELYFMQTLYDGDLAANNGGWQWSASSGMDPKPLRIFN 421
Query: 414 PVAFGQKTDKEGVYIKKYVPELKKY 438
P QK D EG YI+ ++P+L ++
Sbjct: 422 PHTQAQKFDPEGEYIRTWLPQLARF 446
>UniRef50_A1ZPZ8 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Microscilla marina ATCC 23134|Rep: Deoxyribodipyrimidine
photolyase - Microscilla marina ATCC 23134
Length = 483
Score = 151 bits (367), Expect = 3e-35
Identities = 117/452 (25%), Positives = 215/452 (47%), Gaps = 28/452 (6%)
Query: 3 KTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD-------KVGINR 55
+T I WFR DLR+HDN L A ++A+ L P+Y DP + K G +R
Sbjct: 11 RTQVKIVWFRNDLRVHDNDVLAKAASDAD----YLLPVYCFDPRQYETTSLGFAKTGAHR 66
Query: 56 LRFLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDE 115
+FL+++L + L + GK +++ L Q K + +I E +
Sbjct: 67 AQFLIETLANLRANLEAKGSGLVIRIGKPEEVIADLAKATQAKAVYASQEIGTEEDATVK 126
Query: 116 YIEDIAEKKGVFINKR-VQHTVYDVHKVLRENNGAVPLT-YQKFLSLVKSINVKEPIEIS 173
+E K VF+ + ++ N+ + T ++K + + + V+E + +
Sbjct: 127 QLEKRLWKNQVFLELLWTGNLIHPADLPFPLNSLSNVFTDFRK--EIEQGLKVREAVTLP 184
Query: 174 NVLSSHCKPIDIQSENYSIPNLKELQIDE---ETLAPVKYHGGETEALKRLNLYMSKKEW 230
+ L P +++ S+P L +L + +T A + + GGET L+R+ Y+ ++
Sbjct: 185 DTLP--LLPPGVEAG--SLPKLTDLGLTHTTPDTRAVLHFKGGETAGLQRIEDYIWQRSL 240
Query: 231 VCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLM 290
+ ++ + + ST SP++++G +SA+ Y+++K+ E L+ +L+
Sbjct: 241 LQHYKDTRNGLLGADYSTK-FSPWLANGAISARTVYHEIKKYEQQVVKNKSTYHLVFELL 299
Query: 291 WREFYYTAGTGVANFDKMVGNAIC---IQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLK 347
WRE++ + + G +++ + F K W G+TG PF+DA MR+L
Sbjct: 300 WREYFRLVARKYGHRIFVKGGIKAKGEVEMSSNRKRTF-KRWKNGETGIPFIDANMRELN 358
Query: 348 QEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYK 407
G++ + R VA +LT+ DL I+W GA FE L+DYD S N NW +++ +
Sbjct: 359 ATGFMSNRGRQNVASYLTK-DLKINWVHGAMYFESQLIDYDVSSNWCNWNYVAGVGNDPR 417
Query: 408 YFRVYSPVAFGQKTDKEGVYIKKYVPELKKYP 439
R + ++ + D +G Y+K ++PEL P
Sbjct: 418 KDRYFDILSQANRYDNKGAYVKHWLPELASIP 449
>UniRef50_Q84KJ5 Cluster: Cryptochrome DASH,
chloroplast/mitochondrial precursor; n=8;
Magnoliophyta|Rep: Cryptochrome DASH,
chloroplast/mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 569
Score = 151 bits (367), Expect = 3e-35
Identities = 114/444 (25%), Positives = 204/444 (45%), Gaps = 19/444 (4%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD--------KVGINRLRFL 59
I WFR DLR+ DN AL A + ++ + P+Y LDP + K G R FL
Sbjct: 87 ILWFRNDLRVLDNDALYKAWSSSDT----ILPVYCLDPRLFHTTHFFNFPKTGALRGGFL 142
Query: 60 LQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIED 119
++ L L + GK ++LP L D+ + + + E V + +
Sbjct: 143 MECLVDLRKNLMKRGLNLLIRSGKPEEILPSLAKDFGARTVFAHKETCSEEVDVERLVNQ 202
Query: 120 IAEKKGVFINKRVQHTVYDVHKV-LRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSS 178
++ G + HK L + +P Y +F KS+ K I S +
Sbjct: 203 GLKRVGNSTKLELIWGSTMYHKDDLPFDVFDLPDVYTQFR---KSVEAKCSIRSSTRIPL 259
Query: 179 HCKPIDIQSENYSIPNLKELQID-EETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKP 237
P + +P L++L ++ +E +++ GGE+ + R+ Y KK+ + +++
Sbjct: 260 SLGPTPSVDDWGDVPTLEKLGVEPQEVTRGMRFVGGESAGVGRVFEYFWKKDLLKVYKET 319
Query: 238 NSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYT 297
+ + ST SP+++ GC+S + Y +++ E R ++ +L+WR+++
Sbjct: 320 RNGMLGPDYSTK-FSPWLAFGCISPRFIYEEVQRYEKERVANNSTYWVLFELIWRDYFRF 378
Query: 298 AGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLAR 357
N +G +Q W+++ ++W + KTGYP +DA M++L G++ + R
Sbjct: 379 LSIKCGNSLFHLGGPRNVQGKWSQDQKLFESWRDAKTGYPLIDANMKELSTTGFMSNRGR 438
Query: 358 HMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAF 417
+V FL R D+ + W GA+ FE LLDYD N GNW + + + R +S
Sbjct: 439 QIVCSFLVR-DMGLDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQ 497
Query: 418 GQKTDKEGVYIKKYVPELKKYPRE 441
Q D EG Y+ ++ +L++ P+E
Sbjct: 498 AQNYDPEGEYVAFWLQQLRRLPKE 521
>UniRef50_Q3VTE5 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Prosthecochloris aestuarii DSM 271
Length = 477
Score = 149 bits (360), Expect = 2e-34
Identities = 118/443 (26%), Positives = 203/443 (45%), Gaps = 24/443 (5%)
Query: 3 KTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD--KVGINRLRFLL 60
K TVI WFR DLR+ DN AL A E + P+Y LD + ++G +L
Sbjct: 2 KRKTVICWFRQDLRLEDNPALFVAAEEG-----YVLPVYILDDSSPGTWQMGSATRCWLH 56
Query: 61 QSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDI 120
SL L + RG+ +++L L + + + +P +++D+ I+
Sbjct: 57 HSLVSLNRSFDGK---LGIFRGEPLEILKTLARQHKAEKIVWNRCYEPWRMKRDQGIKAT 113
Query: 121 AEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFL-SLVKSINVKEPIEISNVLSSH 179
+ +G+ ++ +++ H+VL++NN + F + ++ + P+ +
Sbjct: 114 LQAEGIEVSSFNGSLLWEPHEVLKQNNTPYRVFTPFFRRGCLNALPPRTPLPAPQRMLM- 172
Query: 180 CKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNS 239
ID + L + D + ++ + GE A + L ++ + + +++
Sbjct: 173 ADTIDNSISVQDLNLLPSIPWDSQLIS--HWSVGENSARQSLLRFLD--QGLNGYKEGRD 228
Query: 240 SPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAG 299
P S LSP + G LS +Y+ K +G+ + +L WREF YT
Sbjct: 229 FPGQNHVSR--LSPALHFGELSPNTVWYEAKRCGSGQDLD----HFLSELGWREFAYTLL 282
Query: 300 TGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHM 359
+ + + PW ND L W +G TGYP VDA MR+L Q G++H+ R +
Sbjct: 283 YHNHDMPEKNLQSAFDAFPWVHNDETLIRWQQGMTGYPLVDAGMRELWQTGYMHNRVRMI 342
Query: 360 VACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF-FYKYFRVYSPVAFG 418
FL + +L + W G + F D LLD D + N+ W W++ YFRV++PV G
Sbjct: 343 TGSFLVK-NLLLHWHYGQQWFHDCLLDADLANNSAGWQWIAGCGVDAAPYFRVFNPVRQG 401
Query: 419 QKTDKEGVYIKKYVPELKKYPRE 441
+K D +G Y ++VPEL K P++
Sbjct: 402 EKFDPDGTYTLRFVPELAKLPKK 424
>UniRef50_A7HMU7 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Fervidobacterium nodosum Rt17-B1|Rep:
Deoxyribodipyrimidine photo-lyase - Fervidobacterium
nodosum Rt17-B1
Length = 436
Score = 146 bits (354), Expect = 1e-33
Identities = 125/431 (29%), Positives = 198/431 (45%), Gaps = 40/431 (9%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI-KDKVGIN-RLRFLLQSLEX 65
++ F+ DLR+ DN AL A+ + + PI+ + I K+ N ++ F++ L+
Sbjct: 4 MYLFKRDLRLDDNKALFEALKNSSK----IIPIFVFNKTILKEFNAYNQKVGFVVDVLKN 59
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 125
LYV G+ ++L LF ++ L + ++D IE + K
Sbjct: 60 ISKKIN-----LYVFHGEDDEILEFLFSKYKPDALYTAQSFSWQGEERDRNIEKVCRKCN 114
Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDI 185
V + + + D K+ P Y+K+L V+S + IE L +D+
Sbjct: 115 VKFHAVFDNYLADFRKI-PYTKVFTPF-YKKWLGYVESQEYEINIE---ELKRKVVALDL 169
Query: 186 QSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIE 245
+ + + EL E Y G +RL Y K+++ P ++
Sbjct: 170 DTIDTILVKFPELNQKNEVFT---YDYG----FERLRSYD-----FAKYQEQRDFPG-LD 216
Query: 246 PSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANF 305
S+ LSPYI G LS ++++ N P + QL WREF+Y + F
Sbjct: 217 MSSR-LSPYIRFGVLS-------IRKIHNIASKVSP--EFVRQLAWREFWYHIKYNFSEF 266
Query: 306 DKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLT 365
+K+ + W ++ + + +TGYP VDA +RQLKQE W+H+ R +VA FL
Sbjct: 267 NKLEFLEKRRNVRWRYDEKLFEKFVNAQTGYPIVDAGIRQLKQENWMHNRVRLIVANFLV 326
Query: 366 RGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEG 425
+ DL I W G K F +YLLDYD LN GNW W ++ K R+++P+ +K D
Sbjct: 327 K-DLLIDWRIGEKFFREYLLDYDEVLNVGNWQWSASVGPDPKPLRIFNPMIQSEKFDPNC 385
Query: 426 VYIKKYVPELK 436
YIKKY+PELK
Sbjct: 386 EYIKKYIPELK 396
>UniRef50_Q5FS98 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Gluconobacter oxydans|Rep: Deoxyribodipyrimidine
photolyase - Gluconobacter oxydans (Gluconobacter
suboxydans)
Length = 479
Score = 145 bits (352), Expect = 2e-33
Identities = 128/442 (28%), Positives = 199/442 (45%), Gaps = 21/442 (4%)
Query: 2 SKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIK--DKVGINRLRFL 59
S+ I WFR DLR+ D+ AL +EA L +Y LD +G +L
Sbjct: 4 SQNRPAIVWFRDDLRMADHPAL----HEAAASGWPLICLYILDDVTPALHPLGAAARWWL 59
Query: 60 LQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIED 119
+L L L G A LLP+L + + QD I
Sbjct: 60 RGALADLRRNLEKQGGTLLTLSGSAEKLLPQLAKQTDAASVHWHHRLHERERAQDNRIRR 119
Query: 120 IAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSH 179
E++ ++ + + D V + G + F +++ V EP+E + LS H
Sbjct: 120 TLEEQECEVHAQWGTVLVDPDTVQTKQGGFYKVC-GSFWKALQTHAVPEPLEAPSRLSFH 178
Query: 180 CKPIDIQSE-NYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPN 238
P + S+ + +L D + GE E + L ++ K V + P
Sbjct: 179 AIPASVLSDARLNEDSLCPQAPDWAAGFRKTWEPGEAEGQEHLEDFL--KNSVAGY--PR 234
Query: 239 SSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREF--YY 296
E T+ LSPY++ G +S + + L++ +G HT P + +L WREF Y
Sbjct: 235 GRDRVAEEGTSRLSPYLASGAVSPRQVWAALQK--HGA-HTDGPRIFLSELGWREFARYT 291
Query: 297 TAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLA 356
F+ + + W ++ A LKAW G+TG P VDA MRQL Q GW+H+ A
Sbjct: 292 LYHLPKLPFENLSPKFSGMH--WRRSAADLKAWQRGQTGVPIVDAGMRQLWQTGWMHNRA 349
Query: 357 RHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF-FYKYFRVYSPV 415
R +V FLT+ L I W+EG F D L+D D++ NA NW W++ + +FR+++P
Sbjct: 350 RMIVGSFLTK-HLLIDWKEGDAWFRDTLVDADFANNAMNWQWVAGTGIEATPFFRIFNPT 408
Query: 416 AFGQKTDKEGVYIKKYVPELKK 437
+K D G YI+++VPEL++
Sbjct: 409 RQAEKFDPNGDYIRQWVPELRR 430
>UniRef50_Q6ML17 Cluster: Deoxyribodipyrimidine photolyase-class I;
n=1; Bdellovibrio bacteriovorus|Rep:
Deoxyribodipyrimidine photolyase-class I - Bdellovibrio
bacteriovorus
Length = 435
Score = 145 bits (351), Expect = 2e-33
Identities = 125/447 (27%), Positives = 208/447 (46%), Gaps = 41/447 (9%)
Query: 1 MSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKV---GINRLR 57
MSK + WFR DLR+ DN L +A+ E + + P++ D I + + R+
Sbjct: 1 MSKV--TLFWFRRDLRLDDNAGLYHALKE----RSAVLPLFIFDSEILENLDDPADARVT 54
Query: 58 FLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYI 117
F+ + ++ + L V GK +++L L D+ V+ + D +P ++DE +
Sbjct: 55 FIYEQIQDMKQQLNAKKSDLIVRHGKPLEVLKTLSDEMAVEAIYANHDYEPAARKRDEKV 114
Query: 118 EDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLT-YQKFLSLVKSINVKEPIEISNVL 176
A K G+ +++ ++L + P T Y + + V + N+ E L
Sbjct: 115 AAWAAKAGIEFLTFKDQCLFEKDEILTD--ARKPYTVYTPYRNKVLA-NLSE-----FYL 166
Query: 177 SSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEK 236
S+ P D+ +Y+ +K+ E L +K G E ++ + +S K + +
Sbjct: 167 KSY--PNDLYESSYA--KVKKA----EPLLTLKSLGFERSNIEFPPMDLSTK-MLKTYHA 217
Query: 237 PNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYY 296
P E T+ L ++ G LS + + K+ PV L +L+WR+F+
Sbjct: 218 TRDFPAD-EKGTSHLGLHLRFGTLSVRELAREAKKYS--------PVWL-SELIWRDFFM 267
Query: 297 TAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLA 356
+ +I W K+ A + W EG+TGYP VDA MR+L G++H+
Sbjct: 268 QILWHFPQVENQSFRPEYDKIAWRKSKADFQKWCEGRTGYPLVDAGMRELNATGYMHNRV 327
Query: 357 RHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF-FYKYFRVYSPV 415
R +VA FL + L I W EG + F LLDYD S N GNW W + S YFR+++P
Sbjct: 328 RMVVASFLCK-HLLIHWYEGERYFAKKLLDYDLSANNGNWQWAAGSGCDAAPYFRIFNPQ 386
Query: 416 AFGQKTDKEGVYIKKYVPE--LKKYPR 440
+K D +G Y++K+VPE +YP+
Sbjct: 387 TQFEKFDPDGKYVQKWVPEYGTDEYPQ 413
>UniRef50_Q1VSH4 Cluster: Deoxyribodipyrimidine photolyase-class I;
n=13; Bacteroidetes|Rep: Deoxyribodipyrimidine
photolyase-class I - Psychroflexus torquis ATCC 700755
Length = 457
Score = 144 bits (349), Expect = 4e-33
Identities = 111/444 (25%), Positives = 203/444 (45%), Gaps = 38/444 (8%)
Query: 3 KTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGIN--RLRFLL 60
K + WFR D+R+ DN+ L +A++ + + P++ D NI +++ + R+ F+
Sbjct: 24 KNKVRVFWFRRDMRLEDNVGLYHALSGVFS----VVPLFIFDKNILNELQEDDARISFIF 79
Query: 61 QSLEXXXXXXXXXX-TCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIED 119
+ L+ + + + +L D++V+ + D +P Q+D I
Sbjct: 80 EQLQKMRSHLQDHYGSSIATYHSTPEEAFHELLKDFEVEAVYTNRDYEPYAHQRDSKINT 139
Query: 120 IAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSH 179
+ +G+ + +++ +V +N+G + L + ++ K E N+
Sbjct: 140 LLANQGIEFHDFKDQVIFEKTEV-EKNDGGMYLVFTPYMRQWKK-------EFENIDLK- 190
Query: 180 CKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNS 239
SE++ K + + +L+ + G ++ ++ Y K+ + +E +
Sbjct: 191 ----TFPSEDHLDNTYKNSMLPDVSLSDM----GFVKSSIQVPDYNITKDLLEHYEDTRN 242
Query: 240 SPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAG 299
P SIE T+ LSPY+ G + + V+N + + +L+WREFY
Sbjct: 243 IP-SIE-GTSRLSPYLRFGLIGYRKLIQAALSVKNE--------TFLNELIWREFYKAIL 292
Query: 300 TGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHM 359
+I W ++ + W +GKTGYP VDA MRQL + GW+H+ R +
Sbjct: 293 YNHPKTQNSAFKPKYDRIEWRNDENEFEKWKKGKTGYPIVDAGMRQLNETGWMHNRLRMV 352
Query: 360 VACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF-FYKYFRVYSPVAFG 418
V FL + L I W G F + LLDY+ S N G W W++ S YFR+++P +
Sbjct: 353 VGSFLCK-HLLIDWRWGEAYFAEKLLDYEMSSNVGGWQWVAGSGVDAAPYFRIFNPYSQT 411
Query: 419 QKTDKEGVYIKKYVPELK--KYPR 440
+ DK+ YI K++PEL +YP+
Sbjct: 412 DRFDKDKKYIMKWIPELNTDRYPK 435
>UniRef50_P27526 Cluster: Deoxyribodipyrimidine photo-lyase; n=16;
Pezizomycotina|Rep: Deoxyribodipyrimidine photo-lyase -
Neurospora crassa
Length = 642
Score = 144 bits (349), Expect = 4e-33
Identities = 127/459 (27%), Positives = 220/459 (47%), Gaps = 35/459 (7%)
Query: 7 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD---KVGINRLRFLLQSL 63
V+HWF++DLR+HDN +L A +A+ L +Y L P + + I R+ F+L++L
Sbjct: 137 VVHWFKMDLRLHDNRSLWLASQKAKEAGVPLICLYVLSPEDLEAHLRAPI-RVDFMLRTL 195
Query: 64 EXXXXXXXXXXTCLYV----LRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQD-EYIE 118
E L+V R + + +L W +L C ++ + + ++++ + ++
Sbjct: 196 EVLKTDLEDLGIPLWVETVEKRKEVPTKIKELMKSWGASHLFCAMEYEVDELRREAKLVK 255
Query: 119 DIAE-KKGVFINKRVQH-TVYDVHKVLRENNGAVPLTYQK-FLSLVKSINVK-EPIEISN 174
+AE +KG + V H T + L+ +G Y F + +K I E +EI
Sbjct: 256 LLAEGEKGEKMAADVVHDTCVVMPGALQSGSGGQYAVYSPWFRAWIKHIEENPECLEIYE 315
Query: 175 VLSSHCKPIDIQSENY---SIPNL---KELQIDEETLAPVKYHGGETEALKRLNLYMSKK 228
+ + EN SIP K L+ DE+ + GE EALKRL +
Sbjct: 316 KPGPNPPGTKEKHENLFACSIPEAPEGKRLRDDEKARYHSLWPAGEHEALKRLEKFCD-- 373
Query: 229 EWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSL--- 285
E + K+ + + P T+ LS + + G LSA+ ++ N ++ +
Sbjct: 374 EAIGKYAERRNIPAM--QGTSNLSVHFASGTLSARTAIRTARDRNNTKKLNGGNEGIQRW 431
Query: 286 MGQLMWREFYYTAGTGVANFDKMVGNA----ICIQIPWTKNDAFLKAWAEGKTGYPFVDA 341
+ ++ WR+FY + ++ + N I W+ N AW +G+TG+P +DA
Sbjct: 432 ISEVAWRDFYKHV---LVHWPYVCMNKPFKPTYSNIEWSYNVDHFHAWTQGRTGFPIIDA 488
Query: 342 IMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW-LS 400
MRQ+ G++H+ R +VA FL + DL + W G + F ++L+D D++ N G W + S
Sbjct: 489 AMRQVLSTGYMHNRLRMIVASFLAK-DLLVDWRMGERYFMEHLIDGDFASNNGGWGFAAS 547
Query: 401 ASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYP 439
YFRV++P+ +K D +G YI+K+V EL+ P
Sbjct: 548 VGVDPQPYFRVFNPLLQSEKFDPDGDYIRKWVEELRDLP 586
>UniRef50_Q21MT8 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Saccharophagus degradans 2-40|Rep: Deoxyribodipyrimidine
photolyase - Saccharophagus degradans (strain 2-40 /
ATCC 43961 / DSM 17024)
Length = 483
Score = 143 bits (346), Expect = 9e-33
Identities = 125/444 (28%), Positives = 192/444 (43%), Gaps = 26/444 (5%)
Query: 7 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXX 66
++ W +LR+ DN AL A++ A+ +L P Y D + +L SL
Sbjct: 3 ILLWLSNNLRLSDNPALHAAVDSADANGEVL-PAYIKDTANPWPIQGAAAWWLHHSLAAF 61
Query: 67 XXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGV 126
L + G L+P+L ++ + +P VQ I ++ +
Sbjct: 62 TNSIKNKGGVLSLFEGDPATLVPELISQNKIDAVYLSQGFEPYEVQLQANIHKWCKQHNI 121
Query: 127 FINKRVQHTVY--DVHKVLRENNGAVPLTYQKFLSLVKSINVKEPI--EISNVLSSHCKP 182
+ H + D H + V Y K +I +PI ++ V ++ P
Sbjct: 122 ECKRFAGHLLLNPDTHLNKQGKPFQVFTPYYKAALATHTIPRAKPIPSNLAKVWAAKKLP 181
Query: 183 IDIQSENYSI-PNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSP 241
+ + PNL P GE A K L + K + + + P
Sbjct: 182 KSVALNKLKLLPNLNWADQFNSQWQP-----GEEGAHKNLREAIEDK--IASYTRDRDFP 234
Query: 242 NSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTG 301
+++ T++LS ++ G +S + + ++ +G Q + QLMWR+F Y
Sbjct: 235 -AVD-GTSLLSAHLRFGEISPRQIWQQVATQMDGEQCA----PFLRQLMWRDFSYALLHH 288
Query: 302 VANFDKMVGNAICIQIPW----TKNDAF-LKAWAEGKTGYPFVDAIMRQLKQEGWIHHLA 356
+ + + PW KN A L AW G TGYP VDA MRQL Q GW+H+
Sbjct: 289 WPHIPQQAFKQQFEKFPWQKASNKNVAKQLHAWQTGTTGYPIVDAGMRQLWQTGWMHNRV 348
Query: 357 RHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS-ASAFFYKYFRVYSPV 415
R +VA FLT+ L I W EGAK F D L+D D + N W W++ A YFR+++PV
Sbjct: 349 RMIVASFLTK-HLRIHWHEGAKWFWDTLVDADLANNTAGWQWVAGCGADAAPYFRIFNPV 407
Query: 416 AFGQKTDKEGVYIKKYVPELKKYP 439
G+K DK+G YIK +VPEL P
Sbjct: 408 LQGEKFDKQGEYIKTWVPELAALP 431
>UniRef50_Q86RA1 Cluster: Photolyase related protein; n=1;
Aphrocallistes vastus|Rep: Photolyase related protein -
Aphrocallistes vastus
Length = 563
Score = 143 bits (346), Expect = 9e-33
Identities = 117/451 (25%), Positives = 208/451 (46%), Gaps = 37/451 (8%)
Query: 15 LRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXXXXXXXXXX 74
LR+ DN AL A+ + ++ + +Y D V R +FL+ LE
Sbjct: 56 LRLKDNTALYQAMAQNPDKFYA---VYIFDGFDSKPVAPVRWQFLIDCLEDLKEQLNGFG 112
Query: 75 TCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQH 134
LY RG+ +D+L L W+VK L+ +D D F +E I + IN +
Sbjct: 113 LELYCFRGETIDVLATLVQAWKVKLLSINMDPDVNFTFFNEKIVKMCT-----INAVQLY 167
Query: 135 TVYDVHKVLR---ENNGAVPLTYQKFLSLVKSINVKEP-IEISNVLSSHCKPIDIQSEN- 189
D H++L + A+P++ + L L ++I K+ +E + P++ + +
Sbjct: 168 NDMDSHRLLYLPPKYKSAIPMSKFRVL-LAEAITAKQNNLESEAKIQDITPPLNPEQLSD 226
Query: 190 ------------YSIPNLKELQIDEETLAPVKY--HGGETEALKRLNLYMSKKEWVCKFE 235
IP L L +EE +A + + GGE LN Y +E +
Sbjct: 227 LGNKPRLDSPLPSEIPKLNALFTEEE-IAKLNFIFQGGERRTEDYLNEY---REARLRDV 282
Query: 236 KPNSSPNSIEPSTTVLSPYISHGCLSAK-LFYYKLKEVENGRQHTLPPVSLMGQLMWREF 294
+ + I +SP++ GC++ + LF + +K +++ + ++ +M R+F
Sbjct: 283 SGDEDASPIAAKAMGISPHLRFGCITPRHLFNFLVKTIKDANYSRIKINKVLAGIMARDF 342
Query: 295 YYTAGTGVANFDKMVG-NAICIQIPWTKND-AFLKAWAEGKTGYPFVDAIMRQLKQEGWI 352
++++ N IC+ IPW KN+ ++ + +TG+PF DA + QLK EG++
Sbjct: 343 ALQVSQLQTIPERIISLNKICLPIPWDKNNNEIVEKLTDAQTGFPFFDAAITQLKTEGYV 402
Query: 353 HHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVY 412
+ +A F+T LW+SWEEG F +L+ +D +++ +W+ S S + Y
Sbjct: 403 INEVSEALATFVTNSLLWVSWEEGQNFFSQHLICFDLAMSTHSWLEASGSTMVTGRQKSY 462
Query: 413 -SPVAF-GQKTDKEGVYIKKYVPELKKYPRE 441
P+ F +K D G YIK+Y+P+ +P E
Sbjct: 463 QDPLLFVSKKLDPNGEYIKRYLPKFINFPIE 493
>UniRef50_Q1MZD6 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Oceanobacter sp. RED65|Rep: Deoxyribodipyrimidine
photolyase - Oceanobacter sp. RED65
Length = 478
Score = 142 bits (345), Expect = 1e-32
Identities = 107/436 (24%), Positives = 200/436 (45%), Gaps = 31/436 (7%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDK--VGINRLRFLLQSLEXXX 67
WFR DLR+HDN AL +A+ + Y L D+ V + + + Q LE
Sbjct: 8 WFRRDLRVHDNPALFHAMKNGQ-----CIAFYCLAQKQWDEHQVSLRQRSLIRQQLEDLT 62
Query: 68 XXXXXXXTCLYVLRGKAVDLLPKLF----DDWQVKYLTCQVDIDPEFVQQDEYIEDIAEK 123
L V+ +PK F + V+ L C + + V + + + ++
Sbjct: 63 QSLAALGVPLIVIDTADFKSIPKTFVSVLQQYNVEQLFCNAEYEVNEVALTKNVTEALQQ 122
Query: 124 KGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNV--LSSHCK 181
+ + ++ + ++ + + Y+ F + K+ + I + ++ L +
Sbjct: 123 QDIKCHEYHDQCLIQPGVIVNKQDQP----YKVFTAFKKAYLAQLDIYMRDLYPLPKKQQ 178
Query: 182 PIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSP 241
++++ ++ ++ ++ ID + G E AL L+ + K+ + +++ P
Sbjct: 179 APKVKTDISALQSIAQVDIDP-------WQGSEQVALDALDEFC--KDRIKAYKRDRDIP 229
Query: 242 NSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTG 301
S++ T+ LSPY++ G LS + + ++V + +L+WR+FY
Sbjct: 230 -SLD-GTSTLSPYLAIGSLSVRQCWQMSQQVSPSGSKPEGIATWQSELIWRDFYRHLIYF 287
Query: 302 VANFDKMVG-NAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMV 360
+ + +PW K+ A +AW +G+TGYP VDA MRQL Q GW+H+ R +
Sbjct: 288 FPHVCQYKAFKQETDHLPWKKDQALFQAWCDGRTGYPLVDAAMRQLNQTGWMHNRLRMVA 347
Query: 361 ACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW-LSASAFFYKYFRVYSPVAFGQ 419
A FL++ L+I W G F L+D D + N G W W S YFR+++P+ +
Sbjct: 348 AMFLSK-HLFIDWRLGEAYFMQQLIDGDLASNNGGWQWSASTGVDAVPYFRIFNPIRQSE 406
Query: 420 KTDKEGVYIKKYVPEL 435
+ D +G ++++YVPEL
Sbjct: 407 RFDSKGTFLRQYVPEL 422
>UniRef50_A7P504 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=4; Magnoliophyta|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 564
Score = 142 bits (345), Expect = 1e-32
Identities = 117/450 (26%), Positives = 208/450 (46%), Gaps = 39/450 (8%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD--------KVGINRLRFL 59
I WFR DLR+ DN AL A ++ + P+Y +DP + K G R +FL
Sbjct: 91 IVWFRNDLRVLDNEALVKAWASSQ----AVLPVYCVDPRLFGTTHYFGFPKTGALRAQFL 146
Query: 60 LQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYL-----TCQVDIDPEFVQQD 114
++ L L + GK ++LP L ++ + TC +++ E + ++
Sbjct: 147 IECLADLKRNLMNRGLNLLIQHGKPEEILPSLAKTFEAHTVYAHKETCSEELNVERLVRN 206
Query: 115 EYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKS-INVKEPIEIS 173
+ + + T+Y + L + ++P Y +F V+S ++ I
Sbjct: 207 G-LRQVVSSNHPKLQLIWGSTMYHIED-LPFSTSSLPDVYTQFRKSVESKCTIRICIRTP 264
Query: 174 NVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKR--LNLYMSKKEWV 231
+L P +I+ S+P++ +L + EE A +++ GGE AL R L +Y + + +
Sbjct: 265 TLLGP---PPNIEDWG-SVPSIDQLGLHEEK-AGMRFIGGEAAALSRDLLKVYKATRNGM 319
Query: 232 CKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMW 291
+ +T SP+++ G LS + Y ++K E RQ ++ +L+W
Sbjct: 320 LGADY-----------STKFSPWLASGSLSPRFIYQEVKRYEKERQANDSTYWVLFELIW 368
Query: 292 REFYYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGW 351
R+++ N +G ++ W+++ +AW +G TGYP +DA M++L G+
Sbjct: 369 RDYFRFLSVKYRNSLFHLGGPRKVEARWSQDQTMFEAWRDGCTGYPLIDANMKELSATGF 428
Query: 352 IHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRV 411
+ + R +V FL R D+ I W GA+ FE LLDYD N GNW + + + R
Sbjct: 429 MSNRGRQIVCSFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRY 487
Query: 412 YSPVAFGQKTDKEGVYIKKYVPELKKYPRE 441
+S + D EG Y+ ++PEL+ P +
Sbjct: 488 FSIPKQAKTYDPEGEYVAFWLPELQALPND 517
>UniRef50_Q04449 Cluster: Deoxyribodipyrimidine photo-lyase; n=13;
Bacilli|Rep: Deoxyribodipyrimidine photo-lyase -
Bacillus pseudofirmus
Length = 339
Score = 142 bits (345), Expect = 1e-32
Identities = 82/229 (35%), Positives = 120/229 (52%), Gaps = 11/229 (4%)
Query: 213 GETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEV 272
GE A+KRL ++ K+ K N SI T+ LSPYI G +S++ YY +
Sbjct: 70 GEEHAIKRLQMFTKKR---LSGYKANRDFPSIT-GTSRLSPYIKTGAVSSRSIYY---HI 122
Query: 273 ENGRQHTLPPVSLMGQLMWREFYYTAGTGVANF-DKMVGNAICIQIPWTKNDAFLKAWAE 331
N + + + +L WR+FY + D+ + ++ W+ + L +W
Sbjct: 123 LNAEADSYSAETFLKELAWRDFYRMVHFYEPDCKDREIMEGYR-ELNWSHDQDDLTSWKR 181
Query: 332 GKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSL 391
G+TG+P VDA MRQL EGW+H+ R + A FLT+ DL I W G + FE L+DYD S
Sbjct: 182 GETGFPIVDAGMRQLLNEGWMHNRLRMITASFLTK-DLLIDWRLGERYFERMLIDYDPSS 240
Query: 392 NAGNWMW-LSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYP 439
N G W W S YFR+++PV ++ D+ G YI+ Y+PEL P
Sbjct: 241 NIGGWQWAASVGTDAVPYFRIFNPVTQSKRFDENGTYIRTYIPELNHVP 289
>UniRef50_A0M4X6 Cluster: Cryptochrome-like DNA photolyase family
protein; n=6; Flavobacteriales|Rep: Cryptochrome-like
DNA photolyase family protein - Gramella forsetii
(strain KT0803)
Length = 438
Score = 142 bits (344), Expect = 2e-32
Identities = 112/410 (27%), Positives = 190/410 (46%), Gaps = 28/410 (6%)
Query: 4 TPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPN--IKD-----KVGINRL 56
T T + WFR DLRI D+ AL A N E + IY DP +KD K G R
Sbjct: 11 TNTGLVWFRNDLRISDHEALTTACNSHEK----IIGIYCFDPRHYLKDQFGFIKTGKFRS 66
Query: 57 RFLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEY 116
+FL++++E L V + K D++P++ ++ VK V E+ Q++
Sbjct: 67 KFLIETIEELQKNLETLNIELLVFQEKPEDIIPEIISEYSVK----SVYFQKEWTQEEHD 122
Query: 117 IEDIAEK--KGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFL-SLVKSINVKEPIEIS 173
+E + + N Q ++ + + +P Y +F S K V+E + +
Sbjct: 123 VEKEVRRLVNDIEFNSYYQQFLFHPEDIPFSSFNDIPKVYTEFRKSCEKYSKVRELVNLP 182
Query: 174 NVLSSHCKPIDIQSENYSIPNLKELQIDE---ETLAPVKYHGGETEALKRLNLYMSKKEW 230
+ L + P E IP+ K+L D+ + + + GGE +A KR+ Y + +
Sbjct: 183 SPLPARNLP-----EKAKIPSFKDLGHDDYEKDKRSAFPFKGGEDQAKKRIQEYFWESKN 237
Query: 231 VCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLM 290
+ ++++ + S+ LS ++++G +SA+ Y+++K+ E L L+ +L+
Sbjct: 238 LTRYKETRNEMIGANYSSK-LSAWLANGSISARQVYHEVKKFEKEITSNLSTYWLIFELI 296
Query: 291 WREFYYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEG 350
WR+F+ AN +G + W + LK W G T Y FV+A MR++ G
Sbjct: 297 WRDFFKYISLKHANKIFKLGGIQNRSLEWNYDKQSLKDWIHGNTKYDFVNANMREISNTG 356
Query: 351 WIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS 400
++ + R V F + +L W GA FE L+DYD N GNWM+ S
Sbjct: 357 FMSNRGRQNVNSFWAK-ELKQDWRIGAAYFESLLIDYDVHSNWGNWMYNS 405
>UniRef50_A0L6R4 Cluster: Deoxyribodipyrimidine photo-lyase; n=4;
Proteobacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Magnetococcus sp. (strain MC-1)
Length = 476
Score = 142 bits (343), Expect = 2e-32
Identities = 117/443 (26%), Positives = 204/443 (46%), Gaps = 27/443 (6%)
Query: 4 TPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSL 63
+PTVI WFR DLR+ DN AL A + + P+Y + N ++ G R+ LQ
Sbjct: 5 SPTVIVWFRRDLRLSDNPALLAATAMGQ-----VLPVYIHENNQQEGGG-GAWRWGLQQA 58
Query: 64 EXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEK 123
C YV G LLP++ + P+ +++D I+ +
Sbjct: 59 LAALNADLQGKLCCYV--GDPARLLPEVAHAVGATGVYWNRLYTPQAIKRDRAIKQSLIE 116
Query: 124 KGVFINKRVQHTVYDVHKVLRENNGAVPL--TYQKFLSLVKSINVKEPIEISNVLSSHCK 181
+G+ + +++ +VL+ + + Y + LV+ + ++P++ ++
Sbjct: 117 RGLQVRSFNGSLLWEPWQVLKADKTPYKVFTPYYRRGCLVQDVP-RQPMDAPPTVTWATL 175
Query: 182 PIDIQSENYSIPNLKELQIDEETLAPVKYHG----GETEALKRLNLYMSKKEWVCKFEKP 237
P + S+ L L + + + K+HG GE A R ++S + +++
Sbjct: 176 PAAAPAP--SMQALDALLLGDVSWHK-KWHGIWSMGEEAAQTRFEHFLS--HGLACYDQG 230
Query: 238 NSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYT 297
P T+ LS + +G LS +Y L+ + +H++ +L WREF Y
Sbjct: 231 RDFPG--RDCTSRLSTALQYGLLSPNQVWYGLEHAK-ADEHSVD--KFRSELAWREFAYY 285
Query: 298 AGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLAR 357
+ PW +++ L W G+TG P VDA MR+L Q G +H+ R
Sbjct: 286 QLFHFPSLPHKNFQPKFDHFPWLEDEVALGRWQTGQTGIPIVDAGMRELWQTGVMHNRVR 345
Query: 358 HMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS-ASAFFYKYFRVYSPVA 416
+V FL + +L + W GA F+D L+DYD ++N+ +W W++ A YFR+++PV
Sbjct: 346 MLVGSFLVK-NLLLDWRAGAAWFKDCLVDYDLAINSASWQWVAGCGADAAPYFRIFNPVT 404
Query: 417 FGQKTDKEGVYIKKYVPELKKYP 439
G+K D+ G Y +++VPEL P
Sbjct: 405 QGEKFDRNGTYTRRFVPELANLP 427
>UniRef50_Q2S3C6 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Salinibacter ruber DSM 13855|Rep: Deoxyribodipyrimidine
photolyase - Salinibacter ruber (strain DSM 13855)
Length = 483
Score = 140 bits (340), Expect = 5e-32
Identities = 117/450 (26%), Positives = 201/450 (44%), Gaps = 31/450 (6%)
Query: 6 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPN-----IKD--KVGINRLRF 58
T + W R DLR+ D+ LR A + + + P+Y DP + D K+ R RF
Sbjct: 4 TALVWIRNDLRVRDHAPLRYAADHYDQ----VIPVYCFDPRHFGTTMFDLPKMSSIRARF 59
Query: 59 LLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIE 118
L +S++ L V G+ D+LP+L + +I E + +E
Sbjct: 60 LRESVQDLRDSVQDLGADLVVRGGRPEDILPELVRQTGANEVLQFQEIGGEEEDVETAVE 119
Query: 119 DIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLV-KSINVKEPIEISNVLS 177
D G T+Y + V + +P Y F V K V+ ++ + L
Sbjct: 120 DALRDTGATPGFFWGKTLYHIDDVPFDGPDDIPKVYTNFRKAVEKKSTVRPTLDAPDSLL 179
Query: 178 SHCKPIDIQSENYSIPNLKELQIDEETLAPVK----YHGGETEALKRLNLYMSKKEWVCK 233
P+ SIP L EL D++ + + GGE+ R++ Y+ + +++ K
Sbjct: 180 ----PLPEDLNPGSIPTLDELGFDDDGTVDERGVLPFRGGESRGHDRIDEYIWRGDFLKK 235
Query: 234 FEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWRE 293
++ + S S +++HGC++ + + +++ E+ R + +L+WR+
Sbjct: 236 YKATRNGLLGANYSAK-FSAWLAHGCITPRQIHEEVERYEDQRVDNKSTYWMKFELIWRD 294
Query: 294 FY----YTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQE 349
F+ + AG + + GN I W D + WA G TG PFVDA MR+L +
Sbjct: 295 FFSYVTWKAGERLFRPGGINGN----DIDWRYYDKSFERWAAGTTGIPFVDANMRELNRT 350
Query: 350 GWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYF 409
G++ + R VA L++ L + W GA FE L+DYD + N GNW + S +
Sbjct: 351 GYMSNRGRQNVASMLSQ-SLKLDWRMGAAYFESRLVDYDVASNWGNWAYNSRVGNDPR-A 408
Query: 410 RVYSPVAFGQKTDKEGVYIKKYVPELKKYP 439
R ++ V ++ D+ G Y++ ++PEL P
Sbjct: 409 RYFNIVKQAKRYDENGEYVRYWLPELADVP 438
>UniRef50_Q8EBW1 Cluster: Deoxyribodipyrimidine photolyase; n=7;
Shewanella|Rep: Deoxyribodipyrimidine photolyase -
Shewanella oneidensis
Length = 512
Score = 140 bits (339), Expect = 7e-32
Identities = 82/234 (35%), Positives = 126/234 (53%), Gaps = 9/234 (3%)
Query: 209 KYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYK 268
++ GE +A + LN ++ +K V +++ P +I+ T+V+SPY++ G LS +
Sbjct: 232 QWAAGEGQAKRLLNQFIQQK--VQDYKQDRDFP-AID-GTSVISPYLAIGVLSPRQCVAA 287
Query: 269 LKE--VENGRQHTLPPVSLMGQLMWREFYYTAGTGVANFDKMVG-NAICIQIPWTKNDAF 325
L + E T P + + +L+WREFY + K N + W N +
Sbjct: 288 LLQRFPEVIVDDTSPGRTWLNELIWREFYRHLLVAFPDLSKGNNFNRQADHVLWRNNQSE 347
Query: 326 LKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLL 385
AW EGKTGYP VDA MRQL Q GW+H+ R +VA FLT+ L I W G + F +L+
Sbjct: 348 FLAWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMVVASFLTK-HLLIDWRWGERYFRQHLI 406
Query: 386 DYDWSLNAGNWMW-LSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKY 438
D D + N G W W YFR+++P++ +K D +G +I+KY+PEL +
Sbjct: 407 DGDLAANNGGWQWSAGCGCDAQPYFRIFNPMSQSEKFDPDGRFIRKYLPELASW 460
>UniRef50_Q2JW81 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Cyanobacteria|Rep: Deoxyribodipyrimidine photolyase -
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria
bacteriumYellowstone A-Prime)
Length = 479
Score = 140 bits (339), Expect = 7e-32
Identities = 117/437 (26%), Positives = 186/437 (42%), Gaps = 22/437 (5%)
Query: 4 TPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGIN--RLRFLLQ 61
T V+ W R DLR+ DN AL A R + P++ DP + + + R+ FLLQ
Sbjct: 2 TSLVLLWHRRDLRLGDNTALHGAAQ----RSPQVVPVFVFDPQLLQRADMAPARVAFLLQ 57
Query: 62 SLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIA 121
+L+ L RG L +L + + + D+DP QQ+ +
Sbjct: 58 ALQELQERYAQMGIPLLWRRGDPAVELRQLAAELGAQAVFWNEDLDPWARQQESRVRASL 117
Query: 122 EKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCK 181
+ G+ ++ +VL + G + F S+ +P I L +
Sbjct: 118 AEAGIPSFSYQDMLLHGPGEVLTQA-GEPYSVFTPFWRRWSSLPKPDPFPIPKSLQA-VS 175
Query: 182 PIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSP 241
+ Q +P+L +L P GE+ A L + + + FE +
Sbjct: 176 SLKAQP----LPSLADLGFVCNQRIPA---AGESVAQGLLEDFC---QGLRIFEYGRARD 225
Query: 242 NSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMG---QLMWREFYYTA 298
E T++LSP++ G + + + EVE + SL +L WREFY
Sbjct: 226 FPAEQGTSLLSPHLCWGTIGIRRVWQATCEVEAEARSEEAESSLKTWRQELCWREFYKHV 285
Query: 299 GTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARH 358
+ + + W + +AW G+TGYP VDA MRQL + GW+H+ R
Sbjct: 286 LVHWPHVESGAYRRAFDALEWDNRQDWFQAWCAGQTGYPIVDAAMRQLNETGWMHNRCRM 345
Query: 359 MVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFG 418
+VA FLT+ DL I W G + F L+D D + N G W W + + R+++P
Sbjct: 346 IVASFLTK-DLLIDWRWGERYFMQKLVDGDLAANNGGWQWSAGVGTDPRPLRIFNPATQA 404
Query: 419 QKTDKEGVYIKKYVPEL 435
+ D EG YI++Y+PEL
Sbjct: 405 ARYDPEGEYIRRYLPEL 421
>UniRef50_A3QCZ8 Cluster: Deoxyribodipyrimidine photo-lyase; n=9;
Gammaproteobacteria|Rep: Deoxyribodipyrimidine
photo-lyase - Shewanella loihica (strain BAA-1088 /
PV-4)
Length = 478
Score = 139 bits (337), Expect = 1e-31
Identities = 73/201 (36%), Positives = 118/201 (58%), Gaps = 15/201 (7%)
Query: 248 TTVLSPYISHGCLSAKLFYYKL----KEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVA 303
T+ LSPY++ G +S++ +L EV QH + + +L+WR+FY +
Sbjct: 243 TSGLSPYLAIGAISSRWLALQLVQRHPEVIYDTQHGA--FTWLNELIWRDFYKHL---LF 297
Query: 304 NFDKMV-GNAICIQ---IPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHM 359
++ +++ G + + +PW N+A +AW EG+TGYP VDA M+QL++ GW+H+ R +
Sbjct: 298 HYPELIKGGSFQPKYESLPWPNNEAHFQAWCEGRTGYPIVDAAMKQLRRTGWMHNRLRMI 357
Query: 360 VACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW-LSASAFFYKYFRVYSPVAFG 418
VA FLT+ L + W +G + F L+D D+S N G W W S YFR+++P+
Sbjct: 358 VASFLTK-HLLVDWHKGERFFMQQLIDGDFSANNGGWQWAASTGCDAQPYFRIFNPITQS 416
Query: 419 QKTDKEGVYIKKYVPELKKYP 439
QK D G +I+KY+PEL++ P
Sbjct: 417 QKFDPRGEFIRKYLPELREVP 437
>UniRef50_A4SQP9 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Aeromonas|Rep: Deoxyribodipyrimidine photolyase -
Aeromonas salmonicida (strain A449)
Length = 473
Score = 138 bits (334), Expect = 3e-31
Identities = 123/443 (27%), Positives = 198/443 (44%), Gaps = 29/443 (6%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQSLEXXX 67
WFR DLR+ DN ALR+A EA + ++ + P + K+ R +FLL ++
Sbjct: 5 WFRNDLRLADNPALRHACAEAGE----VAALFVISPTQWQQHKMAPIRQQFLLAQVDELG 60
Query: 68 XXXXXXXTCLYVLRGKAVDLLP----KLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEK 123
L++LR + +P L + V L I+ + ++D + + +
Sbjct: 61 KALAALGIPLHLLRVETFAEMPTALASLSRELGVSQLYANQAIEIDEQRRDLAVSAMLAE 120
Query: 124 KGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPI 183
+ V + V +VL +G + + F ++ I + +P+
Sbjct: 121 QEVSCHWFNGCCVLPPGRVLT-GSGEMFKVFTPFSRAWLKALEEDGFVIHRAPAPRAEPL 179
Query: 184 DIQ---SENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSS 240
Q +S L E+ D PV GE EA +RL+ ++ V +E+
Sbjct: 180 PWQPLTEREWSYGALGEVTPDPRW--PV----GEAEAQRRLHAFLEPA--VLDYEETRDF 231
Query: 241 PNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTL--PPVSLMGQLMWREFYYTA 298
P + T++LSPY++ G +S + L++ R + P + +L+WREFY
Sbjct: 232 P--AQAGTSILSPYLAAGIISPRQCVGVLQQRLGHRPQSKAQPGFVWLNELVWREFYRHL 289
Query: 299 GTGVANFD-KMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLAR 357
V + +PW+ + AW EG+TGYP VDA MR L GW+H+ R
Sbjct: 290 LVLVPTLSMNLPFKPETATLPWSWDPVAFAAWCEGRTGYPIVDAAMRCLHATGWMHNRLR 349
Query: 358 HMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSAS-AFFYKYFRVYSPVA 416
+VA FLT+ DL I W G F L+D D + N G W W + + A YFRV++P
Sbjct: 350 MIVASFLTK-DLHIHWRLGEDYFMSQLIDGDLAANNGGWQWAAGTGADAAPYFRVFNPTT 408
Query: 417 FGQKTDKEGVYIKKYVPELKKYP 439
GQ+ D +G +I+ +V EL P
Sbjct: 409 QGQRFDPQGDFIRTWVTELADIP 431
>UniRef50_Q6MDF3 Cluster: Putative photolyase; n=1; Candidatus
Protochlamydia amoebophila UWE25|Rep: Putative
photolyase - Protochlamydia amoebophila (strain UWE25)
Length = 471
Score = 137 bits (332), Expect = 5e-31
Identities = 115/442 (26%), Positives = 206/442 (46%), Gaps = 24/442 (5%)
Query: 5 PTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIY--FLDPNIKDKVGINRLRFLLQS 62
P+++ WFR D R+ DN AL N A + + P++ +P + ++G +L S
Sbjct: 4 PSIV-WFRQDFRLEDNPAL----NAATQKGGPVIPVFNWVFNPEKEWQLGGASQWWLYYS 58
Query: 63 LEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAE 122
L L + + + L ++ + + +P +Q D I+ +
Sbjct: 59 LISLKNDLSELGLSLIIRKEDPLKSLLEIAHETGADTVYWNRRYEPMLIQDDAKIKTELQ 118
Query: 123 KKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKE-PIEISNVLSSHCK 181
K+G+ + + +++ + + G + F + +N E P+ + + L
Sbjct: 119 KQGIKAHSFNGNLLFEPWTIANKQ-GKPFQVFTPFWNQCLKLNDPEVPLPVPHSLKKFVG 177
Query: 182 PIDIQSENYSIPNLKELQIDEETLAPVKYHGGET-EALKRLNLYMSKKEWVCKFEKPNSS 240
+ +S + S+ L +++ D+ L V G ++ +AL + L +++ + P+
Sbjct: 178 QLQTESID-SLNLLPKIKWDKG-LKEVWSPGAKSAKALLKKGLTGVIDQYLDIRDLPDHD 235
Query: 241 PNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGT 300
T++LSPY+ G +S ++ + +KE + + Q+ WREF +
Sbjct: 236 ------GTSLLSPYLHFGEISPRMIWQAVKENSTSKGAE----GYLRQIGWREFAHHLLY 285
Query: 301 GVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMV 360
+ + W + LKAW +G+TGYP +DA MRQL + GW+H+ R +V
Sbjct: 286 HFPETPQKPLRSQFNSFSWKNDKQNLKAWQKGQTGYPIIDAGMRQLWKIGWMHNRVRLIV 345
Query: 361 ACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS-ASAFFYKYFRVYSPVAFGQ 419
FL + DL I W EGAK F D L+D D + N W W++ A YFR+++P+ G+
Sbjct: 346 GSFLVK-DLMIHWIEGAKWFWDTLVDADLANNTMGWQWIAGCGADAAPYFRIFNPITQGE 404
Query: 420 KTDKEGVYIKKYVPELKKYPRE 441
K D EG Y+KK+VPEL P+E
Sbjct: 405 KFDPEGNYVKKWVPELINLPKE 426
>UniRef50_Q97VY1 Cluster: Deoxyribodipyrimidine photolyase (DNA
photolyase) (Photoreactivating enzyme); n=5;
Sulfolobaceae|Rep: Deoxyribodipyrimidine photolyase (DNA
photolyase) (Photoreactivating enzyme) - Sulfolobus
solfataricus
Length = 433
Score = 137 bits (332), Expect = 5e-31
Identities = 125/440 (28%), Positives = 197/440 (44%), Gaps = 62/440 (14%)
Query: 11 FRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDP----NIKDKVGINRLRFLLQSLEXX 66
FR DLR+ DN L A+ + E + P + LDP N + + F++ SL
Sbjct: 7 FRRDLRLDDNTGLIKALEDCEK----VIPAFILDPRQVGNENEYKSEFAINFMINSLNEL 62
Query: 67 XXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGV 126
+ LYV G A +++ L D YL D P +DE I E G
Sbjct: 63 NDELRKRGSRLYVYFGLAEEVIKNLLKDVDAVYLN--EDYTPFSKMRDERIRKYCEDTGK 120
Query: 127 FINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQ 186
+ ++ + + +N+ + F ++VK+ +K+P++
Sbjct: 121 IMKS------FEDYLLTSKNDFKNYRNFTTFYNVVKNKQIKKPVQ--------------- 159
Query: 187 SENYSIPNLKELQIDEETLAPVK-YHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIE 245
NY+ L DE L P + GG E +K + ++ +++ + E
Sbjct: 160 -NNYTNYYKNSLG-DEHELPPRQGERGGRKEGIKLI-----ERARQINYDRKDFVA---E 209
Query: 246 PSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANF 305
+ T LSP++ G LS + YY L + + +++ QL WR+FY T +A +
Sbjct: 210 DNRTFLSPHLKFGTLSIREVYYSLLDSQ----------AIIRQLYWRDFY----TLLAYY 255
Query: 306 DKMVGNAICIQ----IPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVA 361
++ V + + I W N+ +AW EGKTGYP +DA MRQL + G + + R + A
Sbjct: 256 NERVFHEPLKREYNCIEWENNERLFQAWLEGKTGYPIIDAGMRQLNRTGDMPNRVRMLTA 315
Query: 362 CFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKT 421
FL + L I W G K F L+DYD S+N GNW W+++ Y FRV+ P
Sbjct: 316 FFLVK-VLIIDWRIGEKYFASKLIDYDPSVNNGNWQWIASVGTDY-IFRVFDPWKQQVTY 373
Query: 422 DKEGVYIKKYVPELKKYPRE 441
D E YIK++V EL+ Y E
Sbjct: 374 DPEAKYIKRWVDELESYDAE 393
>UniRef50_Q6L055 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Picrophilus torridus|Rep: Deoxyribodipyrimidine
photolyase - Picrophilus torridus
Length = 431
Score = 137 bits (332), Expect = 5e-31
Identities = 116/430 (26%), Positives = 196/430 (45%), Gaps = 54/430 (12%)
Query: 11 FRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXXXXXX 70
FR DLR++DN AL ++N ++ P + + + +N F++ SL
Sbjct: 6 FRRDLRLYDNTALLKSLNNETATIFIMDPAQVKNNEYRSEKALN---FMISSLYDLMTDI 62
Query: 71 XXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINK 130
L V G VD+L +L + + + D P +++DE I++ + K + N
Sbjct: 63 EGNHGKLAVFHGDPVDVLKRLVNRENINEIYINRDYTPFSIKRDERIKEFSIKNNIKFNA 122
Query: 131 RVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQSENY 190
+ + D LR +G+ + F + INVK+P+ Y
Sbjct: 123 LDDYFLSDPE--LRTGSGSFFKNFTAFYNRAMEINVKKPV-------------------Y 161
Query: 191 SIPNLKELQIDEETLAPVKYHG-GETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTT 249
I + ID + + +KY+ G A+++++ ++ + F + N T+
Sbjct: 162 EIKKSNLIPIDGDDME-LKYNNYGRKTAIEKMHNFIKNDYSLRDFPELNM--------TS 212
Query: 250 VLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFY-YTAGTGVANFDKM 308
LS I G +S + Y+ +K+ E RQ L WR+FY Y A +F +
Sbjct: 213 FLSADIKFGNISIREAYHYIKDPEFRRQ-----------LYWRDFYLYIA----YHFPYV 257
Query: 309 VGNAIC--IQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTR 366
G+ I W + ++ AW G TGYP VDA MR L + G+I++ R +V+ FL +
Sbjct: 258 FGSNFNRKYNIKWENKEKYIDAWKNGLTGYPIVDAAMRSLNETGYINNRLRMIVSSFLVK 317
Query: 367 GDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYK-YFRVYSPVAFGQKTDKEG 425
DL + W G K F L+DYD + N GNW W++++ + +R+ +P +K D E
Sbjct: 318 -DLHVDWRIGEKYFAQKLIDYDPASNNGNWQWVASTGVNSRGMYRIINPWIQQKKFDPEC 376
Query: 426 VYIKKYVPEL 435
+IK+YV EL
Sbjct: 377 KFIKRYVNEL 386
>UniRef50_Q9HQ46 Cluster: Deoxyribodipyrimidine photo-lyase; n=5;
Halobacteriaceae|Rep: Deoxyribodipyrimidine photo-lyase
- Halobacterium salinarium (Halobacterium halobium)
Length = 481
Score = 137 bits (332), Expect = 5e-31
Identities = 116/447 (25%), Positives = 192/447 (42%), Gaps = 26/447 (5%)
Query: 8 IHWFRLDLRIHDNLALRNAIN--EAENRKHLLRPI---YFLDPNIKDKVGINRLRFLLQS 62
+ W R DLR DN L A A + H P+ + D + R+ F+L +
Sbjct: 3 LFWHRRDLRTTDNRGLAAAAPGVTAVDGGHDQGPVAAVFCFDDEVLAHAAPPRVAFMLDA 62
Query: 63 LEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAE 122
L + L V G +LP + +D + D +D + D +
Sbjct: 63 LAALRERYRDLGSDLIVRHGDPAAVLPAVANDLDATRVVWNHDYSGLATDRDAGVRDALD 122
Query: 123 KKGVF---INKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSH 179
GV + V H ++ + ++K+ K+ EP E +++ +
Sbjct: 123 AAGVAHAQFHDAVHHRPGEIRTNAGDPYSVYTYFWRKWQDREKNPPAPEP-EPADLAADT 181
Query: 180 CKPIDIQSENYSIPNLKELQIDE-ETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPN 238
++ +P+++EL E E P G A L+ + + + ++E
Sbjct: 182 AL-----ADTSPLPSVQELGFAEPEAAVP---DAGTAAARSLLDAFRESGD-IYRYEDRR 232
Query: 239 SSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQ---HTLPPVSLMGQLMWREFY 295
P+ EP T+ LSP++ G + + Y + ++ + +GQL WREFY
Sbjct: 233 DYPHE-EP-TSRLSPHLKFGTIGIRTVYEAARAAKSDADTDDERENVAAFIGQLAWREFY 290
Query: 296 YTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHL 355
N A I W + A L+AW +G+TGYP VDA MRQL+ E ++H+
Sbjct: 291 AQVLYFNQNVVSENFKAYEHPIEWRDDPAALQAWKDGETGYPIVDAGMRQLRAEAYMHNR 350
Query: 356 ARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW-LSASAFFYKYFRVYSP 414
R +VA FLT+ DL + W G F + L D+D + + G W W S YFRV++P
Sbjct: 351 VRMIVAAFLTK-DLLVDWRAGYDWFREKLADHDTANDNGGWQWAASTGTDAQPYFRVFNP 409
Query: 415 VAFGQKTDKEGVYIKKYVPELKKYPRE 441
+ G++ D + YI ++VPEL+ P +
Sbjct: 410 MTQGERYDPDADYITEFVPELRDVPAD 436
>UniRef50_Q0APK4 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;
Rhodobacterales|Rep: Deoxyribodipyrimidine photo-lyase -
Maricaulis maris (strain MCS10)
Length = 499
Score = 137 bits (331), Expect = 6e-31
Identities = 116/438 (26%), Positives = 185/438 (42%), Gaps = 17/438 (3%)
Query: 2 SKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLR--FL 59
S T + WFR DLR+HDN AL A+ L + DP+ ++ R +L
Sbjct: 5 SATAAALVWFRRDLRLHDNPALWAAVRSGRP----LVCAFIDDPDAVAQLAPGRASRWWL 60
Query: 60 LQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIED 119
SL L + RG L +L + + +P D +
Sbjct: 61 HHSLAALSRSIRQRGGQLVLRRGDTTSELVRLCGETGSSEVFWNRGDNPTRDSGDTALAA 120
Query: 120 IAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKS-INVKEPIEISNVLSS 178
+GV T+++ L N P Y+ F K+ + EP
Sbjct: 121 RLADRGVKARGFASGTLFNPATHL--NGSGKP--YRVFTPFWKACLRAPEPSAALPAPDR 176
Query: 179 HCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPN 238
S+N +L+ D + + GE AL RL +++ + + P
Sbjct: 177 LPGAAVTASDNLEDWSLRPQAPDWASGFSQDWEPGEDGALNRLEAFLANE----LADYPQ 232
Query: 239 SSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTA 298
S E T+ LSP+++ G +S + ++ +++ + +L WR+F
Sbjct: 233 SRDRPDEDGTSRLSPHLAWGEISPRTIWHTVRDHAERGGSFQGGEKFLSELGWRDFAIYL 292
Query: 299 GTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARH 358
+ N PW N A L AW G+TG P VDA MRQL GW+H+ R
Sbjct: 293 AHHFGSLRDENFNRQFDHFPWRSNPAGLDAWKRGQTGIPIVDAGMRQLWTTGWMHNRVRM 352
Query: 359 MVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSAS-AFFYKYFRVYSPVAF 417
+ A FL + L + W +G FED L+D D ++NA +W W++ S A YFR+++PV
Sbjct: 353 ITASFLIK-HLGVHWRDGMAWFEDTLVDADLNVNAASWQWVAGSGADAAPYFRIFNPVTQ 411
Query: 418 GQKTDKEGVYIKKYVPEL 435
G++ D +G+Y+ ++VPEL
Sbjct: 412 GERFDPQGLYVHRWVPEL 429
>UniRef50_Q9KNA8 Cluster: Deoxyribodipyrimidine photo-lyase; n=25;
Gammaproteobacteria|Rep: Deoxyribodipyrimidine
photo-lyase - Vibrio cholerae
Length = 469
Score = 137 bits (331), Expect = 6e-31
Identities = 125/441 (28%), Positives = 193/441 (43%), Gaps = 34/441 (7%)
Query: 10 WFRLDLRIHDNLALRNAINEAEN--RKHLLRPI----YFLDPNIKDKVGINRLRFLLQSL 63
WFR DLR DN AL A+N + ++ P + L P D + RL L Q L
Sbjct: 5 WFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIW-RRLAELQQEL 63
Query: 64 EXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEK 123
+ AV L K + QV D + + Q+D+ + + +
Sbjct: 64 AALNVPLFYQQVADFQAAAVAVSQLAKTLNATQV---LANRDYELDEQQRDQLAQQLLSE 120
Query: 124 KGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKF----LSLVKS--INVKEPIEISNVLS 177
+G+ + V V R G + F L+L + I P+ + NV S
Sbjct: 121 QGIIWSAFDDKCVLPPGSV-RTKQGEFFKVFTPFKRAWLTLFQPPVIGKNRPVALWNVPS 179
Query: 178 SHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKP 237
+ + + + + P +ID A + E + R L +E V + +
Sbjct: 180 ALAELVWHPEQAFDYP-----RIDSTPWA------ADFETV-RAQLRDFCRERVQDYHQA 227
Query: 238 NSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYT 297
P T+ LSPY++ G LSA+ +L + + + + +L+WREFY
Sbjct: 228 RDFP--AREGTSSLSPYLAIGVLSARQCVARLYHESSMGELSEGAQVWLSELIWREFYQH 285
Query: 298 AGTGVANFDKMVGNAIC-IQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLA 356
N K ++ W ++ + W EGKTGYP VDA MRQL Q GW+H+
Sbjct: 286 LVAIEPNLSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRL 345
Query: 357 RHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW-LSASAFFYKYFRVYSPV 415
R +VA FLT+ DL I W G + F L+D D++ N G W W S YFR+++PV
Sbjct: 346 RMIVASFLTK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPV 404
Query: 416 AFGQKTDKEGVYIKKYVPELK 436
+ G+K D G +I+++VPEL+
Sbjct: 405 SQGEKFDPNGDFIRRWVPELR 425
>UniRef50_Q11W86 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Bacteroidetes|Rep: Deoxyribodipyrimidine photolyase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 434
Score = 136 bits (329), Expect = 1e-30
Identities = 115/407 (28%), Positives = 183/407 (44%), Gaps = 29/407 (7%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLD-------PNIKDKVGINRLRFLL 60
I WF+ DLR+HDN L AI +++ + P+Y LD P K G R +FLL
Sbjct: 5 IVWFKTDLRLHDNETLVRAIEQSDE----IIPVYCLDEDHFKITPFGFQKTGNFRAQFLL 60
Query: 61 QSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDI 120
+SL + L V+RGK L K+ ++ + + ++ E Q + +E
Sbjct: 61 ESLNDLDTNLRKLGSGLIVVRGKPETELYKIVKQYEAFKVFAKREVAYEEQQTEARVEKE 120
Query: 121 AEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHC 180
K G T+Y L + +P + F V+ KE S++ S
Sbjct: 121 IWKLGCTFESFSTSTLYHAQD-LPFSIKDIPEVFTNFRKKVE----KE----SSIRSVFQ 171
Query: 181 KPIDIQSE---NYSIPNLKELQID---EETLAPVKYHGGETEALKRLNLYMSKKEWVCKF 234
KP I+S +P +K L + ++ A +K+ GGE+E KRL Y+ + + + +
Sbjct: 172 KPAHIKSPAMPQLRLPTVKGLGLQPVIQDPRAVMKFTGGESEGCKRLTSYLFETQLISHY 231
Query: 235 EKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREF 294
+ + ST SP+++ GCLS + Y +LK+ E+ L+ +L+WR++
Sbjct: 232 KNTRDGMIGSDYSTK-FSPWLALGCLSPREIYTELKKYESRFSANESTYWLIFELLWRDY 290
Query: 295 Y-YTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 353
+ + F G ++ A L W GKTG F+DA M +L G++
Sbjct: 291 FRFMMKKHKHQFFLYSGIKDSANASGLQDTAILSQWINGKTGNDFIDANMLELTHTGFMS 350
Query: 354 HLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS 400
+ R A +L DL I W GA FE L+DYD N GNW +L+
Sbjct: 351 NRGRQNAASYLCN-DLGIDWRYGAAYFEQQLIDYDVCSNWGNWAYLA 396
>UniRef50_P57386 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Buchnera aphidicola (Acyrthosiphon pisum)|Rep:
Deoxyribodipyrimidine photo-lyase - Buchnera aphidicola
subsp. Acyrthosiphon pisum (Acyrthosiphon pisumsymbiotic
bacterium)
Length = 483
Score = 135 bits (327), Expect = 2e-30
Identities = 118/444 (26%), Positives = 193/444 (43%), Gaps = 34/444 (7%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQSLEXXX 67
WFR DLR++DN AL A +N + ++ P V ++ F+ L
Sbjct: 7 WFRNDLRVYDNTALHQA---CQNDTDKVISLFISTPKQWHNQSVSKKKISFMYYHLISLQ 63
Query: 68 XXXXXXXTCLYVLRG----KAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEK 123
LY +++ L +V L + +D ++ +
Sbjct: 64 KELLKLNIILYYHESTDFLNSIEYLIFFCKKHKVNNLFYNYEYAINERYRDYLVKKKLSQ 123
Query: 124 KGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI--NVKEPI-EISNVLSSHC 180
KG + + ++ ++ + N TY+ F K + N+ I + V S
Sbjct: 124 KGFLVKGFHDNLLFSNRQIRNQKNE----TYKVFTFFKKKVIQNLHNNIPQCFPVPSKRK 179
Query: 181 KPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKK--EWVCKFEKPN 238
DI + S+ N+ L ++ PV GE EA+ RL + K ++ K + P
Sbjct: 180 SDRDIFLTSISLKNVN-LNFNKNFF-PV----GEKEAINRLKNFCIYKFNDYFLKRDYP- 232
Query: 239 SSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQ-HTLPPVSLMGQLMWREFYYT 297
+T++LSPY+S G +S++ L + +N + L Q++WREFYY
Sbjct: 233 -----FLDATSMLSPYLSAGIISSRYCLKVLLKTKNSLPLNVLLTSPWFDQILWREFYYH 287
Query: 298 AGTGVANFDKMVGNAICI-QIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLA 356
G + +I W N AW EG TG+P +DA MRQL + GW+H+
Sbjct: 288 LLIGFPKISRSESLVTWEKEIHWINNIKHFNAWKEGNTGFPIIDAGMRQLNELGWMHNRL 347
Query: 357 RHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW-LSASAFFYKYFRVYSPV 415
R + + FL + +L I+W EG + F L+D D +LN G W W S Y R+++P+
Sbjct: 348 RMITSSFLVK-NLLINWREGEEHFISNLIDGDLALNNGGWQWSASVGCDSVPYIRIFNPL 406
Query: 416 AFGQKTDKEGVYIKKYVPELKKYP 439
+ D+ G +IKK++PELK P
Sbjct: 407 HQSKTFDESGNFIKKFIPELKNVP 430
>UniRef50_UPI0000E87D35 Cluster: deoxyribodipyrimidine photo-lyase;
n=1; Methylophilales bacterium HTCC2181|Rep:
deoxyribodipyrimidine photo-lyase - Methylophilales
bacterium HTCC2181
Length = 465
Score = 134 bits (325), Expect = 3e-30
Identities = 120/450 (26%), Positives = 206/450 (45%), Gaps = 61/450 (13%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGIN---RLRFLLQSLEXX 66
WFR DLR+HDN AL +A+++++N + ++ D NI + + R+ F+ ++L
Sbjct: 2 WFRRDLRLHDNHALHHALSQSDN----VYCVFIFDKNILNDLKSKEDQRIEFIWEALSEM 57
Query: 67 XXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDP----------EFVQQ--- 113
+ + V+ G + +P L + + L D + E +QQ
Sbjct: 58 KASLNSLSSDITVIHGDPIHAIPLLLKKYDCEALFFNKDYESYANKRDMRIMEHIQQSSA 117
Query: 114 DEY-IED--IAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPI 170
D Y +D + E+K + +TV+ +K NN L YQK ++ N K
Sbjct: 118 DAYQFKDTVLFEEKEILSQADKPYTVFSPYK----NNHLAKL-YQKGITQYDCENNKRSF 172
Query: 171 EISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEAL---KRLNLYMSK 227
+ K + + S ++ NL +L I P GG + L KR++ Y K
Sbjct: 173 AKIKIE----KLLSLDSLGFTKTNLSKLAI------PTGSSGGRSLLLDFEKRIDQYKLK 222
Query: 228 KEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMG 287
+++ K + LS + G +S + L + + +L +
Sbjct: 223 RDYPGK------------KGVSYLSVHNRFGTISIR--EQALIAINKQSEGSLV---WLN 265
Query: 288 QLMWREFYYTAGTGVANF-DKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQL 346
+L+WR+FY+ + + D Q+ + N F +AW G+TG+P +DA M QL
Sbjct: 266 ELIWRDFYFQILSNFPHINDGKSFKPQFNQLRFENNVTFFEAWKNGRTGFPIIDAAMHQL 325
Query: 347 KQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW-LSASAFF 405
+ G++H+ R +VA FL + DL I W G F + L+D+D+S N G W W S
Sbjct: 326 NKTGFMHNRLRMIVASFLVK-DLLIDWRWGESYFAEKLIDFDFSANNGGWQWAASTGCDA 384
Query: 406 YKYFRVYSPVAFGQKTDKEGVYIKKYVPEL 435
+FR+++P+ +K D EG++IKKY+P+L
Sbjct: 385 QPWFRIFNPLLQSEKFDPEGLFIKKYLPQL 414
>UniRef50_Q0C191 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=2; Alphaproteobacteria|Rep:
Deoxyribodipyrimidine photolyase family protein -
Hyphomonas neptunium (strain ATCC 15444)
Length = 485
Score = 134 bits (325), Expect = 3e-30
Identities = 119/447 (26%), Positives = 196/447 (43%), Gaps = 24/447 (5%)
Query: 1 MSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI---KDKVGINRLR 57
MS I WFR DLR+ DN AL A+N L +Y + ++ G +R
Sbjct: 1 MSSASPAILWFREDLRLTDNPALNAAVNSGRP----LICVYLRETGAGAPREMGGASRW- 55
Query: 58 FLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYI 117
+L +SL L + G A ++P L ++ + + D I
Sbjct: 56 WLNKSLASLGASLEAIGGKLTLRTGPAEKIIPALVEETGAAAVFWNRRYGLPERETDAAI 115
Query: 118 EDIAEKKGV---FINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISN 174
+ + GV N R+ +D L+ +G + F +++ K P I +
Sbjct: 116 KKTLKDNGVECQSFNGRLLMEPWD----LKTGSGGWYKVFTPFWRALQA-QYKPPAFIPS 170
Query: 175 VLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKF 234
++EN L + D + GE A KRL+ ++ V +
Sbjct: 171 --PKKIAGASAETENLKDWGLHPEKPDWSGGIAAAWEPGEVGAQKRLDAFLDGP--VSDY 226
Query: 235 EKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSL-MGQLMWRE 293
+ P + T+ LSP++ G + + ++ +Q + + ++ WRE
Sbjct: 227 VGTRNLPG-VSTGTSRLSPHLRFGEIGPAQIWRAVRARLEAQQADEDSARVFLSEIAWRE 285
Query: 294 FYYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 353
F YT N+ Q+ W K+D+ AW+ G+TGYP VDA MR+L GW+H
Sbjct: 286 FSYTLLYYNPALATENYNSNFNQMAWRKDDSGFAAWSRGQTGYPIVDAGMRELWHTGWMH 345
Query: 354 HLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSAS-AFFYKYFRVY 412
+ R +VA FLT+ L + W++G + F D L+D D + N +W W + S A YFRV+
Sbjct: 346 NRVRMIVASFLTK-HLLLPWQQGEQWFWDTLVDADPAANPASWQWTAGSGADAAPYFRVF 404
Query: 413 SPVAFGQKTDKEGVYIKKYVPELKKYP 439
+P++ GQK D++G Y++ + PEL P
Sbjct: 405 NPISQGQKFDEDGAYVRHWCPELAGLP 431
>UniRef50_A3D723 Cluster: Deoxyribodipyrimidine photo-lyase; n=8;
Alteromonadales|Rep: Deoxyribodipyrimidine photo-lyase -
Shewanella baltica OS155
Length = 505
Score = 134 bits (325), Expect = 3e-30
Identities = 114/435 (26%), Positives = 192/435 (44%), Gaps = 20/435 (4%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQSLEXXX 67
WFR DLR+ DN AL A + A L+ IY P + V +L F+ + +
Sbjct: 30 WFRQDLRLADNQALTAACDWARANGVALKAIYIATPTQWQRHDVAPIQLDFIERHINLLA 89
Query: 68 XXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVF 127
+++ A +P + + +V E ++ + + G+
Sbjct: 90 QGLASLGITFELIQLDAFADVPAFIGHYCQQQGISRVFAGSEPEINEQQRDQACIQAGIP 149
Query: 128 INKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQS 187
+ +H + VL + G + + F + I + I + V + P+ +
Sbjct: 150 LVLTDEHCLLKPGTVLNLS-GDMYKVFTPFSRKWREIAARHAIFLLPV-PAPLGPVLTEP 207
Query: 188 ENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPS 247
+ + N+ + + E A GE +A + L+ ++ +K V +++ P +I+
Sbjct: 208 KPHLFNNVTK--VSSELWA-----AGEGQAKRILSAFIQQK--VQDYKQDRDFP-AID-G 256
Query: 248 TTVLSPYISHGCLSAKLFYYKLKE--VENGRQHTLPPVSLMGQLMWREFYYTAGTGVANF 305
T+ +SPY++ G +S + L E T P + + +L WREFY +
Sbjct: 257 TSSISPYLAIGVISPRQCVAALLHDFPEVIVDDTSPARTWLNELTWREFYRHLLVAFPDL 316
Query: 306 DKMVG-NAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFL 364
K N + W N AW EG+TGYP VDA MRQL Q GW+H+ R +VA FL
Sbjct: 317 SKNHNFNRQADHVQWRNNPQEFAAWCEGRTGYPIVDAAMRQLNQTGWMHNRLRMVVASFL 376
Query: 365 TRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW-LSASAFFYKYFRVYSPVAFGQKTDK 423
T+ L I W G + F L+D D + N G W W YFR+++P++ +K D
Sbjct: 377 TK-HLLIDWRWGERYFRQKLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPMSQSEKFDP 435
Query: 424 EGVYIKKYVPELKKY 438
+G +I+KY+PEL +
Sbjct: 436 DGSFIRKYLPELASW 450
>UniRef50_A4A8B3 Cluster: Deoxyribodipyrimidine photo-lyase; n=4;
Bacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Congregibacter litoralis KT71
Length = 482
Score = 134 bits (324), Expect = 4e-30
Identities = 114/443 (25%), Positives = 197/443 (44%), Gaps = 20/443 (4%)
Query: 4 TPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIK-DKVGINRLRFLLQ- 61
T TVI WFR DLR++D AL+ A + R+ L P+Y D + D V R+ L
Sbjct: 2 TDTVILWFRQDLRLNDLPALQAA--SRDGRRVL--PLYIFDEDSPGDWVMGGASRWWLHH 57
Query: 62 SLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIA 121
SL L RGK+ ++L + + C +P ++++ + +
Sbjct: 58 SLSALARDIEDQGGKLIFRRGKSREVLGDICKSTDATAVYCSRRYEPWASEEEKMLHEDL 117
Query: 122 EKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCK 181
+ + +++ V+ ++ G + + F ++ EP+ + +V S
Sbjct: 118 GNSDIDFKRYGGTLLHEPGNVMTQSGGPYKV-FTPFWRACLELDRAEPVPVPDVTWSTFT 176
Query: 182 PIDIQSENYSIPNLKELQID-EETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSS 240
D + P EE P GE A +RL+ ++ +E V ++
Sbjct: 177 KSDALDDWQLRPTSPNWAASWEEYWTP-----GEDGAQQRLHDFL--EESVSRYADERDF 229
Query: 241 PNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVS-LMGQLMWREFYYTAG 299
P E ++ LSP++ HG LS + + ++ + + + ++ WREF Y
Sbjct: 230 P--AEEVSSRLSPHLHHGELSPRQVWAMCEQKKLETPASEKAIKKFQAEIGWREFSYHLL 287
Query: 300 TGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHM 359
+ PW + L+ W +G+TGYP VDA MR+L G +H+ R +
Sbjct: 288 HFFPEIPEKAFKENFADFPWQPDKTRLERWQQGQTGYPIVDAGMRELWATGTMHNRIRMV 347
Query: 360 VACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSAS-AFFYKYFRVYSPVAFG 418
VA FL + L W G F D L+D D + N +W W++ S A YFR+++P+ G
Sbjct: 348 VASFLCK-HLLQHWRSGEDWFWDTLVDADMASNGCSWQWVAGSGADAAPYFRIFNPITQG 406
Query: 419 QKTDKEGVYIKKYVPELKKYPRE 441
+K DK G Y++++VPE+ + P +
Sbjct: 407 EKFDKHGDYVRQWVPEIARLPNK 429
>UniRef50_Q39EN4 Cluster: Deoxyribodipyrimidine photolyase; n=42;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 518
Score = 134 bits (323), Expect = 6e-30
Identities = 73/196 (37%), Positives = 111/196 (56%), Gaps = 10/196 (5%)
Query: 246 PSTTVLSPYISHGCLSAKLFYYKLKEVEN--GRQHTLPPVSLMGQLMWREFYYTAGTGVA 303
P+T+ LSP++ G LS + ++ ++ N G + +L WREF YT +
Sbjct: 272 PATSRLSPFLRFGNLSPRQVWHAVQGAANAGGAAVAADADKFLSELGWREFSYTL---LY 328
Query: 304 NFDKMVGNAICIQ---IPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMV 360
+F + + Q +PW + A L+AW G+TGYP VDA +R+L GW+H+ R +V
Sbjct: 329 HFPALASDNFRAQFDAMPWRDDPAALRAWQRGRTGYPLVDAGLRELWTTGWMHNRVRMVV 388
Query: 361 ACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS-ASAFFYKYFRVYSPVAFGQ 419
A FL + L I W G F D L+D D + NA +W W++ A YFR+++PVA GQ
Sbjct: 389 ASFLIK-HLLIDWRAGEAWFWDTLVDADPANNAASWQWVAGCGADAAPYFRIFNPVAQGQ 447
Query: 420 KTDKEGVYIKKYVPEL 435
K D +G Y++++VPEL
Sbjct: 448 KFDPDGAYVRRWVPEL 463
>UniRef50_A2BUZ7 Cluster: Putative deoxyribodipyrimidine photolyase;
n=3; Prochlorococcus marinus|Rep: Putative
deoxyribodipyrimidine photolyase - Prochlorococcus
marinus (strain MIT 9515)
Length = 503
Score = 133 bits (322), Expect = 8e-30
Identities = 113/435 (25%), Positives = 192/435 (44%), Gaps = 36/435 (8%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI-KDKVGINRL-RFLLQSLEX 65
I WF+ DLRI+DN AL ++ + + + PI+ ++ I K +R +F +SL
Sbjct: 6 ILWFKKDLRINDNEALIESLKDRD-----IIPIFIIEKEIWSQKTYSDRQWQFCKESLLD 60
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDI-DPEFVQQDEYIEDIAEKK 124
L + GK +++ ++ +++++K + + D ++D+ + A K
Sbjct: 61 LRISLANIGQPLIIRTGKVIEIFDQISNNFEIKAIYSHQETGDYLTYKRDQEVRKWASMK 120
Query: 125 GVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPID 184
+ + +Q +V+ L NN + L + PIEI P +
Sbjct: 121 KIIWKEYLQFSVF--RGKLDRNNWSTKWKKNMERKLFTEPSKINPIEID--------PGE 170
Query: 185 IQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSI 244
I +N+ ++ + GG LKR+ + S K + + K SSP
Sbjct: 171 IPPDNFFC--------FKDDFCKGRLKGGREIGLKRMEYFFSNK--LSYYSKDISSPEKS 220
Query: 245 EPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVAN 304
S + LSPYIS GC+S K +K + N L +L W +
Sbjct: 221 FDSCSRLSPYISWGCISIKEIIHKANSITNPNSKMLK-----SRLTWHCHFIQKLESEPE 275
Query: 305 FDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFL 364
+ + +I K+ LK W+EGKTG+PF+DA MR L GW++ R M+ F
Sbjct: 276 LEFKEFHPYFQKIR-KKDSHLLKLWSEGKTGFPFLDACMRSLNFHGWLNFRMRAMLMSFA 334
Query: 365 TRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKE 424
+ +LWI W+E LDY+ ++ N + A R+Y+P+ G+ D +
Sbjct: 335 SY-NLWIPWQESGSELASKFLDYEPGIH-WNQCQMQAGTTSINVNRIYNPIKQGKDHDPK 392
Query: 425 GVYIKKYVPELKKYP 439
G +IKK+VPE++ YP
Sbjct: 393 GNFIKKWVPEIQNYP 407
>UniRef50_Q5ZYZ9 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Legionella pneumophila|Rep: Deoxyribodipyrimidine
photolyase - Legionella pneumophila subsp. pneumophila
(strain Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 471
Score = 132 bits (320), Expect = 1e-29
Identities = 109/433 (25%), Positives = 201/433 (46%), Gaps = 27/433 (6%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXXXXX 69
WFR DLR+ DN A A + E ++ P+Y D +G + +L SL
Sbjct: 7 WFRQDLRLTDNPAFIEACSHHE----IVIPLYIYDDKCS-VLGQAQAWWLHYSLIALGKS 61
Query: 70 XXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFIN 129
L + +G +++ +L + V+ + +P+ + +D+ I+ ++ + +
Sbjct: 62 LNQQGLSLVLRKGSPQEIILELVAQYGVESVYWNRCYEPQVIARDKKIKLALVEREIKVQ 121
Query: 130 KRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQSEN 189
+ +++ + +N + + + +N+ P +L+ + I+I S++
Sbjct: 122 SFNGNLLHEPWTIKNKNGDFFKVFTPYWKQCRQILNIPSPF----ILTKRPRGIEIASDD 177
Query: 190 YSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTT 249
L I+ + GE A K+L+ ++ + +++ P + +T+
Sbjct: 178 IGKWKLLPA-INWAARFSEYWIPGEEGAQKKLDEFIVHH--LSGYKRDRDFP--AKNATS 232
Query: 250 VLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVS-LMGQLMWREF-----YYTAGTGVA 303
LSP++ G +S + L+ + L V + +L WREF Y+
Sbjct: 233 RLSPHLHFGEISPWVILRALELAKLEHTCDLASVEHFLSELGWREFSVYLLYHFPKLDCE 292
Query: 304 NFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACF 363
NF K PW ++ L W +G TGYP +DA MR+L G++H+ R +VA F
Sbjct: 293 NFRKEFD-----AFPWQNDEQLLTCWQKGMTGYPIIDAGMRELWATGYMHNRVRMIVASF 347
Query: 364 LTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS-ASAFFYKYFRVYSPVAFGQKTD 422
LT+ DL I W GA+ F D L+D D + N+ +W W++ A YFR+++P+ QK D
Sbjct: 348 LTK-DLLIDWRSGAQWFLDTLVDADLANNSASWQWVAGCGADAAPYFRIFNPILQSQKFD 406
Query: 423 KEGVYIKKYVPEL 435
+GVYI++++PEL
Sbjct: 407 PDGVYIRQWIPEL 419
>UniRef50_A5GQG9 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Synechococcus sp. RCC307|Rep: Deoxyribodipyrimidine
photolyase - Synechococcus sp. (strain RCC307)
Length = 467
Score = 132 bits (320), Expect = 1e-29
Identities = 119/435 (27%), Positives = 187/435 (42%), Gaps = 23/435 (5%)
Query: 8 IHWFRLDLRIHDNLALR--NAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEX 65
+ W R DLR+ DNL L +AI +L P P + R FLL+SL
Sbjct: 5 LFWHRRDLRLADNLGLAAVSAITPEVMGVFVLDPAELEHPTMAPA----RRWFLLESLRE 60
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 125
+ L +L G V+LLP+L + D++P Q+D + + G
Sbjct: 61 LQQRWRQAGSQLLLLEGNPVELLPRLAQQLGAAGVAWNRDVEPLVRQRDRELAAALKAIG 120
Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDI 185
V + + + L+ G Y + + +P+ + L + KP D+
Sbjct: 121 VRVAADWDQLLVPPEQ-LKTGGGDPYRVYGPYWRSWEKQPKAKPVPAPSELKALLKP-DL 178
Query: 186 QSENYSIPNLKELQIDEETLAPV-KYHGGETEALKRLNLYMSKK-EWVCKFEKPNSSPNS 243
+P L E+ ++ A + GET AL++L + ++ E C+ + P
Sbjct: 179 SG----LPVLNEVPVEPWEGADLCPCRPGETAALEQLEHFAARAMEHYCE---GRNLPG- 230
Query: 244 IEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSL---MGQLMWREFYYTAGT 300
+ T+ LS + G LS + + +V + + S+ +L WREFY A
Sbjct: 231 -DEGTSTLSAALRAGSLSPRTAWAASLDVWSHCRSDEQRQSVTVWQQELAWREFYQQALF 289
Query: 301 GVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMV 360
Q PW + LKAW +G TG P VDA MRQL Q G++H+ R +V
Sbjct: 290 HFPELADGPYRPQWRQFPWEDDPVRLKAWQDGLTGVPIVDAAMRQLVQTGFMHNRCRMIV 349
Query: 361 ACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQK 420
A FL + DL W G F + +D D + N G W W ++S K R+++P K
Sbjct: 350 ASFLVK-DLICDWRHGEAFFMAHEVDGDLAANNGGWQWSASSGMDPKPLRIFNPFTQASK 408
Query: 421 TDKEGVYIKKYVPEL 435
D E YI++++PEL
Sbjct: 409 FDPEATYIRRWLPEL 423
>UniRef50_Q2S3L9 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Salinibacter ruber DSM 13855|Rep: Deoxyribodipyrimidine
photolyase - Salinibacter ruber (strain DSM 13855)
Length = 463
Score = 131 bits (317), Expect = 3e-29
Identities = 110/431 (25%), Positives = 181/431 (41%), Gaps = 32/431 (7%)
Query: 11 FRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDK-----VGINRLRFLLQSLEX 65
FR DLR+ DN L A ++ + P + DP D + FL++SL+
Sbjct: 9 FRRDLRLADNTGLARACRASDE----VVPAFIFDPRQCDPDNNAFFSEHAFAFLVRSLKE 64
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 125
L+V G +L +L + + D P ++D+ + + ++G
Sbjct: 65 LRRRLRERGGRLFVFEGDPAAILSELVSAGDISAVHVNRDYTPFARRRDDQLRSVCREEG 124
Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDI 185
+ + +V GA T+ F +S++ P V C +
Sbjct: 125 ARFQSSNALLLTEPEEVQPSGGGAYH-TFTPFRRRAQSVSTPPPR--GKVEGPFCDRA-L 180
Query: 186 QSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIE 245
E + D+ ++ GG E ++ ++ + E + + P +
Sbjct: 181 SVETTPLETYDRYPTDD-----LRAKGGRAEGIE----FLEEIETLGAYRDARHQP--AK 229
Query: 246 PSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANF 305
S T LS + G +S + Y +K+ L+ Q WR+FY
Sbjct: 230 ESLTALSAHHKFGTISIRESLYVVKKAFEDYH------KLISQFYWRDFYTHLLFHRPEQ 283
Query: 306 DKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLT 365
I IPW W EG TG PFVDA MR+L++ G++H+ R +VA FLT
Sbjct: 284 LTTSLRPIGRHIPWRNERGEFDRWHEGATGVPFVDAGMRELRETGYMHNRVRMVVASFLT 343
Query: 366 RGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEG 425
+ DL + W GA+ F L DYD ++NAGNW W ++ Y+ R+Y+P + +K D E
Sbjct: 344 K-DLLVDWRWGAQHFARTLTDYDPAVNAGNWQWAASVGTDYR-LRIYNPYSQAEKHDPEA 401
Query: 426 VYIKKYVPELK 436
YIK++VPE++
Sbjct: 402 EYIKRWVPEVR 412
>UniRef50_Q23DL8 Cluster: FAD binding domain of DNA photolyase
family protein; n=9; cellular organisms|Rep: FAD binding
domain of DNA photolyase family protein - Tetrahymena
thermophila SB210
Length = 486
Score = 130 bits (314), Expect = 7e-29
Identities = 118/449 (26%), Positives = 206/449 (45%), Gaps = 49/449 (10%)
Query: 3 KTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGIN---RLRFL 59
K I WFR DLR++DN AL NA+ +++N + P++ D I DK+ R+ F+
Sbjct: 54 KRKVSIFWFRRDLRLNDNTALYNAL-KSQNE---VVPLFIFDTEILDKLEDKKDARVEFI 109
Query: 60 LQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIED 119
+ + L V G + +L ++ ++ + D + Q+DE I+
Sbjct: 110 HLYIMKIQEQLKQVGSTLIVKHGTVDNAFKELVSEFDIQSVYVNRDYESSAKQRDERIKK 169
Query: 120 IAEKKG--VFINKRVQHTVYDVHKVLRENNGAVPLT--YQKFLSLVKSINVKEPIEISNV 175
++ F + + Q +++ ++ + T +K+LS++ S +
Sbjct: 170 YVKQSANAEFYDFKDQ-VIFEASSTNKDGSPYKVFTPYSKKWLSILTSEDYS-------- 220
Query: 176 LSSHCKPIDIQSENY-SIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKF 234
C+P + E + P K + ++E G E + ++ +++K V +
Sbjct: 221 ----CRPSESLMEKFWKSPERKVMSLEEI--------GFEKAGIPFPSVELNEKI-VKNY 267
Query: 235 EKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREF 294
+K +P SIE TT +S ++ G +S + + K + + + +L+WR+F
Sbjct: 268 DKTRDTP-SIE-GTTRMSVHLRFGTVSIRDLVRRSKGLN---------ATYLNELIWRDF 316
Query: 295 YYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 354
Y + + ++ W N AW EGKTGY VDA MRQL Q G++H+
Sbjct: 317 YMMILDQFPHVENNNFKPAYDKLVWRNNVDEFMAWCEGKTGYHLVDAGMRQLNQTGYMHN 376
Query: 355 LARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF-FYKYFRVYS 413
R +VA FLT+ L I W+ G + F LLDYD S N G W W + + YFR+++
Sbjct: 377 RVRMVVASFLTK-HLLIDWKWGERYFASKLLDYDLSANNGGWQWAAGTGTDAQPYFRIFN 435
Query: 414 PVAFGQKTDKEGVYIKKYVPEL--KKYPR 440
P + +K D YIK ++ +L K YP+
Sbjct: 436 PDSQQKKFDPNYTYIKTWIKDLNTKTYPK 464
>UniRef50_Q5NMI6 Cluster: DNA photolyase; n=1; Zymomonas
mobilis|Rep: DNA photolyase - Zymomonas mobilis
Length = 469
Score = 129 bits (311), Expect = 2e-28
Identities = 108/439 (24%), Positives = 203/439 (46%), Gaps = 19/439 (4%)
Query: 1 MSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLL 60
MS T ++ WFR D R+ DN A+ AI ++R ++ +++ + K ++
Sbjct: 1 MSDTRPILIWFRHDFRLRDNAAITAAI---QSRNPVI--CFYIQESADAKTESAADWWVA 55
Query: 61 QSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDI 120
+SL L++ G A ++P++ L D + + D+ ++
Sbjct: 56 ESLLALNRQLKEKGGQLHLFEGDAEKIIPEIVQQSHACKLFWNRRYDFKGKETDQILKKS 115
Query: 121 AEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKE--PIEISNVLSS 178
G+ + + + + V + + + ++ + +N++ P + V S+
Sbjct: 116 IRAMGLEVQSFPNNLLNEPWTVKNDKGQPFRIFSAYWRAVQRHMNIQAVLPCPENWVFST 175
Query: 179 HCKPIDIQSENYSIPNLKELQIDEETLAPVKYHG-GETEALKRLNLYMSKKEWVCKFEKP 237
+ ++ +I KE Q + + H GE EA K+L ++ + + K
Sbjct: 176 REIRHCLGYKDIAIL-AKETQDSSWKIKLKQSHRFGENEAHKQLKSFIEND--LAHYAKE 232
Query: 238 NSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYT 297
P + T++LS ++ G +S+K ++++ + +G + + +L WREF ++
Sbjct: 233 RDFP--AKDGTSLLSAFLRSGQISSKQIWHEVTKNGSGEGTS----KFLEELGWREFAWS 286
Query: 298 AGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLAR 357
+ ++ ++PW K L+ W EG+TGYPF+DA MR L Q G++ + R
Sbjct: 287 VLWEHPDLNQHNLRPEFDKMPWKKASDNLQRWKEGQTGYPFIDAGMRALWQTGFMPNRLR 346
Query: 358 HMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF-FYKYFRVYSPVA 416
+ A FL + L I W EG K F L+DYD + NA NW W++ S YFR+ +P+
Sbjct: 347 MVTASFLVK-HLLIDWREGKKWFAQTLVDYDPACNATNWQWVAGSGIESAPYFRIMNPIL 405
Query: 417 FGQKTDKEGVYIKKYVPEL 435
QK D +G YI+++V EL
Sbjct: 406 QSQKFDPDGQYIREWVKEL 424
>UniRef50_Q0VRI4 Cluster: DNA photolyase; n=1; Alcanivorax
borkumensis SK2|Rep: DNA photolyase - Alcanivorax
borkumensis (strain SK2 / ATCC 700651 / DSM 11573)
Length = 484
Score = 129 bits (311), Expect = 2e-28
Identities = 110/439 (25%), Positives = 184/439 (41%), Gaps = 20/439 (4%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRP----IYFLDPNIKDKVGINRLR--FLLQSL 63
W+R DLR+ + L A+ E+ RP +Y L D+ + LR ++L+SL
Sbjct: 5 WYRNDLRVAAHSPLHAALTESSISAGETRPQALAVYCLCQGQWDRHQVAPLRRWYVLESL 64
Query: 64 EXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQ----VKYLTCQVDIDPEFVQQDEYIED 119
L+VL + +P+ ++ V +L C + Q+D + +
Sbjct: 65 RELGESLANRGIDLHVLDVDTFEKVPEALAEFAQSQGVTHLYCNREYPLNEKQRDTLVAE 124
Query: 120 IAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSH 179
++G+ + + V LR G P T + + + S
Sbjct: 125 RLREQGIIL-RGFDDGVLVPPAALRTGKGT-PYTVFGAYKKRWDVWTADHHPAMTPVPSQ 182
Query: 180 CKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNS 239
C+ + E+ E L ++ GE A ++L+ +M + + + +
Sbjct: 183 CRAEGTFMGAKVVAKALEMLDVPEALTQ-QWAPGEEAAWQQLDQFMERS--LADYRRNRD 239
Query: 240 SPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAG 299
P+ T+ LS +S G LS + + + +L WR+FY
Sbjct: 240 FPDL--SGTSGLSVALSAGTLSVASCFRAATQAMADAGSRDGAACWIDELAWRDFYRQIM 297
Query: 300 TGVANFDKMVG-NAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARH 358
+ G + W +D AW EG+TGYP VDA MRQL GW+H+ R
Sbjct: 298 AQFPRVSRGQGFRPETDLLEWKNDDELFAAWCEGRTGYPLVDAAMRQLVATGWMHNRLRM 357
Query: 359 MVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF-FYKYFRVYSPVAF 417
+ A FL++ LW+ W G F +L+D D++ N G W W ++S YFRV++PV
Sbjct: 358 VTAMFLSK-HLWLDWRRGEAFFMTHLIDGDFAANNGGWQWSASSGTDAVPYFRVFNPVRQ 416
Query: 418 GQKTDKEGVYIKKYVPELK 436
GQ+ D EG +I +VP+L+
Sbjct: 417 GQRFDSEGRFIAHWVPQLR 435
>UniRef50_A1WVH9 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Halorhodospira halophila SL1|Rep: Deoxyribodipyrimidine
photo-lyase - Halorhodospira halophila (strain DSM 244 /
SL1) (Ectothiorhodospirahalophila (strain DSM 244 /
SL1))
Length = 477
Score = 127 bits (307), Expect = 5e-28
Identities = 112/439 (25%), Positives = 191/439 (43%), Gaps = 23/439 (5%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDP-NIKDKVGINRLRFLLQSLEXXXX 68
W R DLR+ D AL A AE L P+Y P + VG +L SL
Sbjct: 7 WLRRDLRLADQPALARAAQTAER----LAPVYIHAPAETRPTVGAASCWWLHHSLAALDA 62
Query: 69 XXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFI 128
+ L + G + + L + C +P QQ+ + + GV +
Sbjct: 63 ELASAGSRLCLDTGPSAERLCHWAQVSDAAVVYCTAIAEPWARQQEAAVAEALAAIGVRL 122
Query: 129 NKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVK-EPIEISN--VLSSHCKPIDI 185
+ D V N P Y+ F +S+ + +P + L + I
Sbjct: 123 EVLADGLLTDPSAV--RNRSGTP--YRAFTPFWRSVRAQLDPPRPAPPPALPGLPEAIPE 178
Query: 186 QSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIE 245
++ L ++ DE+ LAP + G A +RL ++ + + P +
Sbjct: 179 PQPLETLGLLPRIRWDEK-LAPC-WQPGAAGAQQRLERFLDGAGPA--YGERRDFP--AQ 232
Query: 246 PSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPV-SLMGQLMWREFYYTAGTGVAN 304
P T+ LSP++ G +S + ++ +++ + + + + + +L WREF Y
Sbjct: 233 PGTSRLSPHLHFGEISIRAVWHAVRDAQQMQPAAADALDTFLAELGWREFAYHLLWQQPE 292
Query: 305 FDKMVGNAICIQIPWTKND--AFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVAC 362
+ + + PW ++ A L AW G TG P VDA MR+L GW+H+ R +V
Sbjct: 293 LHRTPIDERFSRFPWREDPDGALLDAWRRGATGIPLVDAGMRELWATGWMHNRVRMVVGS 352
Query: 363 FLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS-ASAFFYKYFRVYSPVAFGQKT 421
FL + +L + W+ G F D L+D+D + N+ W W+S A YFR+++PV G++
Sbjct: 353 FLVK-NLRLPWQHGEAHFRDTLVDWDLASNSMGWQWVSGCGADAAPYFRIFNPVRQGERF 411
Query: 422 DKEGVYIKKYVPELKKYPR 440
D +G Y++ +VPE+ P+
Sbjct: 412 DPDGDYVRHWVPEVAGLPK 430
>UniRef50_A6WVR6 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Ochrobactrum anthropi ATCC 49188|Rep:
Deoxyribodipyrimidine photo-lyase - Ochrobactrum
anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168)
Length = 484
Score = 126 bits (305), Expect = 9e-28
Identities = 116/429 (27%), Positives = 187/429 (43%), Gaps = 23/429 (5%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLL-QSLEXXXX 68
W R DLRI+DN AL A AE H+ +Y + + + +R+ L QSLE
Sbjct: 24 WLRNDLRINDNPALDAA---AETGGHITA-VYVHETVAEIRAPGCAVRWWLDQSLEAIRK 79
Query: 69 XXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFI 128
L + G D+LP+L V L P + D ++ ++ G +
Sbjct: 80 QLADRGIELLIETGDPRDILPQLIAKLAVTELFWNRRYAPAEREFDANLKAQLKESGTGV 139
Query: 129 NKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQSE 188
+ + + ++ A YQ F K++ I LS I E
Sbjct: 140 TSFPGNLLLEPWEL----KTASDTPYQVFTPFAKALRHHH---IPRPLSRRQWDIKPTQE 192
Query: 189 NYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPST 248
PN+ + L ++ GE A L ++ + + + P T
Sbjct: 193 TCYSPNVPAWAKKFDGL----WNIGEDAARDCLTRFLENT--LSTYTEDRDVPGI--DGT 244
Query: 249 TVLSPYISHGCLSAKLFYYK-LKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANFDK 307
+ LSP++ G +SA+ +Y L ++ + +L+WR+F Y + +
Sbjct: 245 SRLSPHLRFGEISARQAWYATLAFMDEHHSARAGGEKFLSELIWRDFNYHQLYHRRDISR 304
Query: 308 MVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRG 367
I W + A +AW G+TG+P +DA MRQL GW+H+ R +VA FLT+
Sbjct: 305 HDMRDTLSGIAWRDDRAAFEAWRRGQTGFPIIDAGMRQLWATGWMHNRVRMLVASFLTK- 363
Query: 368 DLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF-FYKYFRVYSPVAFGQKTDKEGV 426
+L I W +G + F D L+D D + N G+W W++ YFRV++P+ G+K D EG
Sbjct: 364 NLLIDWRKGEEWFWDTLVDGDIASNPGSWQWVAGCGMDAAPYFRVFNPILQGEKFDAEGQ 423
Query: 427 YIKKYVPEL 435
Y++ +VPEL
Sbjct: 424 YVRHWVPEL 432
>UniRef50_A1KB68 Cluster: Deoxyribodipyrimidine photo-lyase; n=24;
Betaproteobacteria|Rep: Deoxyribodipyrimidine
photo-lyase - Azoarcus sp. (strain BH72)
Length = 503
Score = 126 bits (305), Expect = 9e-28
Identities = 114/446 (25%), Positives = 194/446 (43%), Gaps = 38/446 (8%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKV---GINRLRF-------L 59
WFR DLR D+ AL +A+ E E + + D +I D + R+ F L
Sbjct: 30 WFRRDLRCVDHAALYHALREHER----VYCAFVFDTDILDALPTRADRRVEFIHAAVVEL 85
Query: 60 LQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIED 119
++LE + L V G+A + +P L V + D +P + +D + +
Sbjct: 86 DRALEALSREAGGSGSGLIVRHGRAQEAIPALAQALGVDAVYVNRDYEPAAIARDRAVAE 145
Query: 120 IAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEI-SNVLSS 178
+ G + ++D +VL + + + ++ + +P + + ++
Sbjct: 146 RLAEHGRTLRDFKDQVIFDRDEVLTQAGQPFSVFTPYKNAWLRKL---DPFYLQAYPIAP 202
Query: 179 HCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPN 238
+ + + +P L + + L + G + A + + E +
Sbjct: 203 RARRLAPKPAGEGVPALGRIGFEPTDLRGLALPTGASGARALFGDFCGRIE---DYRIAR 259
Query: 239 SSPNSIEPSTTVLSPYISHGCLSAK-LFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYT 297
P + LS ++ G + + L Y + + G Q L +L+WR+FY
Sbjct: 260 DFP--AVKGVSYLSTHLRFGTIPVRELAAYAVHQGGAGAQTWL------SELIWRDFYQM 311
Query: 298 AGTGVANFDKMVGNAI---CIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 354
+ + ++V A +I W A AW EG+TGYP VDA MRQL + G++H+
Sbjct: 312 I---LWHHPRVVDQAFRPEFDRIRWDDAPALFDAWREGRTGYPIVDAGMRQLLRSGYMHN 368
Query: 355 LARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW-LSASAFFYKYFRVYS 413
R +VA FLT+ DL + W G + F +L DYD + N G W W S YFR+++
Sbjct: 369 RLRMIVASFLTK-DLGVDWRLGERHFAAHLNDYDLAANNGGWQWAASTGCDAQPYFRIFN 427
Query: 414 PVAFGQKTDKEGVYIKKYVPELKKYP 439
PV QK D EG +I++YVPEL + P
Sbjct: 428 PVTQSQKFDPEGRFIRRYVPELARVP 453
>UniRef50_A0Q6Z2 Cluster: Deoxyribodipyrimidine photolyase; n=6;
Francisella tularensis|Rep: Deoxyribodipyrimidine
photolyase - Francisella tularensis subsp. novicida
(strain U112)
Length = 464
Score = 126 bits (305), Expect = 9e-28
Identities = 116/445 (26%), Positives = 195/445 (43%), Gaps = 31/445 (6%)
Query: 1 MSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLL 60
MSK IHWFR DLR+ DN AL A E I+ LD N +G +L
Sbjct: 1 MSKK-IAIHWFRQDLRLADNPALYQASQADETIT-----IFILDKN--QDIGSASKLWLH 52
Query: 61 QSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDI 120
SL L G ++++ K+ + + D + +D I+
Sbjct: 53 HSLNSLNSSLDNK---LNFYSGNPLEIIKKIIKENNITDFYWNRCYDKYSIDRDTQIKQF 109
Query: 121 AEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHC 180
++ + +N + + + +++ + + L+K + I N S+
Sbjct: 110 LQQHKINVNSFNGSLLIEPWQCKKDDGTHYKVYTPFYKELIKIRKYRSNIAKPNF--SYL 167
Query: 181 KPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSS 240
+ ++ SEN L E + + + ++ GE+ + + L +++ K K + S
Sbjct: 168 RKLN-NSENLDSLKLLEPKHSWQNIIK-QWQIGESASHQILEEFLNNKVKEYKTARDFMS 225
Query: 241 PNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVE---NGRQHTLPPVSLMGQLMWREFYYT 297
+S T+ LSPY+ G +S + ++ ++ N +H + +L+WR+F Y
Sbjct: 226 TDS----TSKLSPYLHFGEISPSQIFNAVQSLDYIGNNEEHFIK------ELVWRDFSYY 275
Query: 298 AGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLAR 357
N W + LK W +G+TG P VDA MR+L Q G++H+ R
Sbjct: 276 QIYYYPELHNKNINQKFDSFKWDNDPTLLKKWQKGQTGIPIVDAGMRELWQTGYMHNRVR 335
Query: 358 HMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF-FYKYFRVYSPVA 416
+VA FL + L I W+ G K F D L D D++ N NW W++ YFR+++PV
Sbjct: 336 MIVASFLIKNCL-IHWKYGEKWFFDTLFDADFASNNANWQWVAGCGLDAAPYFRIFNPVL 394
Query: 417 FGQKTDKEGVYIKKYVPELKKYPRE 441
+K + YI+KYVPELK P +
Sbjct: 395 QAEKFEAY-EYIRKYVPELKLLPNK 418
>UniRef50_Q7UJB1 Cluster: Cryptochrome DASH; n=7; cellular
organisms|Rep: Cryptochrome DASH - Rhodopirellula
baltica
Length = 488
Score = 126 bits (304), Expect = 1e-27
Identities = 100/433 (23%), Positives = 190/433 (43%), Gaps = 12/433 (2%)
Query: 10 WFRLDLRIHDNLA-LRNAINEAENRKHLLRPIYFLDPNIK-DKVGINRLRFLLQSLEXXX 67
WFR DLR D+ LR + + H + P F + + G R RFL+++L
Sbjct: 7 WFRNDLRTIDHEPFLRASTADRCFAVHCIDPRQFETTELGFQRTGPFRARFLIENLTDLR 66
Query: 68 XXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVF 127
L V G+ +L L + + + E E ++ + ++ G+
Sbjct: 67 SRLRSLGGELIVRVGRPETVLQHLLPSLAIDAVHFHHEPRTEEADTAESVQQLCDQHGIA 126
Query: 128 INKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQS 187
+ T+ ++ E L + K + P+E + P ++ +
Sbjct: 127 THVAYGDTLIHPDELPFEIADTPELFTDFRKEIEKQCEARSPLE-EPIRIHGTLPEEVNA 185
Query: 188 ENYSIPNLKELQIDEETLAPV---KYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSI 244
+ IP L+ L + L ++ GG+ A +R+ Y+ ++ + +++ + +
Sbjct: 186 GD--IPTLESLGLSTPPLDDRCLNQFTGGQNAAQQRMEEYIWNEDRLRVYKETRNG--ML 241
Query: 245 EPS-TTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVA 303
P+ ++ SP+++ GCLS ++ ++ E R ++ +L+WR+++
Sbjct: 242 HPNDSSKFSPWLAQGCLSPRMIADHVRRYEEERVKNKSTYWMIFELLWRDYFRWISRKHG 301
Query: 304 NFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACF 363
G + + W + + W +G TGYP VDA MR+L+ G++ + R VA F
Sbjct: 302 ATLFRAGGLRGVNVDWKSDRELFRRWQDGTTGYPLVDANMRELRTTGYMSNRGRQNVASF 361
Query: 364 LTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDK 423
LT+ +L I W GA+ FE L+DYD + N GNW + + + FR ++ + D
Sbjct: 362 LTK-NLGIDWRWGARWFESQLVDYDVASNYGNWNYAAGVGNDARGFRFFNITKQSRDYDS 420
Query: 424 EGVYIKKYVPELK 436
+G Y K ++PEL+
Sbjct: 421 QGEYAKHWLPELR 433
>UniRef50_A4TUK0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Magnetospirillum gryphiswaldense|Rep:
Deoxyribodipyrimidine photo-lyase - Magnetospirillum
gryphiswaldense
Length = 457
Score = 125 bits (302), Expect = 2e-27
Identities = 68/198 (34%), Positives = 109/198 (55%), Gaps = 8/198 (4%)
Query: 245 EPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQ-HTLPPVSLMGQLMWREFYYTAGTGVA 303
+P T++LSP+++ G +S + ++ + + G HT + +L WREF
Sbjct: 220 KPGTSLLSPHLAFGEISPRQIWHAARALPPGDGIHTF-----LKELGWREFSRHLLARQP 274
Query: 304 NFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACF 363
+ + PW + L+ W G+TGYP +DA +RQL Q GW+H+ R +VA F
Sbjct: 275 DLATIPLRPEFRAFPWRDDPEALRKWQMGRTGYPIIDAGLRQLWQTGWMHNRVRMIVASF 334
Query: 364 LTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSAS-AFFYKYFRVYSPVAFGQKTD 422
L + DL I W+ G F D L+D D + NA +W W++ S A +FR+++PV G+K D
Sbjct: 335 LIK-DLLIPWQAGEAWFWDTLVDADSANNAASWQWVAGSGADAAPFFRIFNPVTQGEKFD 393
Query: 423 KEGVYIKKYVPELKKYPR 440
+G Y++ +VPEL P+
Sbjct: 394 PDGTYVRTWVPELAHLPK 411
>UniRef50_A7D4K1 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep:
Deoxyribodipyrimidine photo-lyase - Halorubrum
lacusprofundi ATCC 49239
Length = 498
Score = 125 bits (302), Expect = 2e-27
Identities = 65/159 (40%), Positives = 91/159 (57%), Gaps = 11/159 (6%)
Query: 288 QLMWRE-----FYYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAI 342
+L WRE YYT VAN+ K N +I W ++D +AW G+TGYP VDA
Sbjct: 301 ELSWREQMYHLLYYTPDLAVANY-KSFPN----EIAWREDDTAFEAWTRGETGYPLVDAG 355
Query: 343 MRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSAS 402
MRQL EG++H+ R +VA FLT+ L I W GA+ F L+D+D + N G W W +++
Sbjct: 356 MRQLNAEGYVHNRPRQVVASFLTK-HLLIDWRRGARYFTTQLIDHDHASNHGAWQWTAST 414
Query: 403 AFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPRE 441
R++ PVA K D + ++K+YVPEL+ P E
Sbjct: 415 GTDSVDVRIFDPVAQMAKYDADATFVKEYVPELRDVPAE 453
>UniRef50_A0Y3K3 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Alteromonadales bacterium TW-7|Rep:
Deoxyribodipyrimidine photolyase - Alteromonadales
bacterium TW-7
Length = 436
Score = 122 bits (295), Expect = 1e-26
Identities = 107/430 (24%), Positives = 199/430 (46%), Gaps = 23/430 (5%)
Query: 7 VIHWFRLDLRIHDN-LALRNAINE-AENRKHLLRPIYFLDPNIKDK-VGINRLRFLLQSL 63
+++W + DLR++DN + + A+ + A + ++ P +F + N + K G N+ FL+QSL
Sbjct: 5 ILYWLKNDLRLNDNPIFSKLALQQCALDVVFVINPNWFKNTNYQQKQYGENKYTFLMQSL 64
Query: 64 EXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEK 123
L+VL G+ V +L + + + + +Q E A
Sbjct: 65 YELQQALIARGQTLHVLEGEPVSVLKQRIKEQHIDEVVYSEQFG--VYEQREINLLKAHC 122
Query: 124 KGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHC-KP 182
+ +Q T+Y ++ L N +P ++ F V++ N+ PI +S++ + KP
Sbjct: 123 PQIQFTGTLQDTLYQQNE-LPFNLTDLPKSFTPFKKKVEAANI--PITLSHITTELLPKP 179
Query: 183 IDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPN 242
I + ++N I+ HGG T A K Y + E ++ ++ +
Sbjct: 180 ITLCAKN---------PIELPKAINNSMHGGLTSAQKHCEQYFAG-ELPSTYKITRNALD 229
Query: 243 SIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGV 302
+ +TT SP+++ GC+SAK Y +++ E + +L+WRE++ V
Sbjct: 230 GFD-NTTKFSPWLAFGCISAKQIYNAVEQYEQTYTANDSTYWIKFELLWREYFKWHALNV 288
Query: 303 -ANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVA 361
++ G + + F AW +G T YP V+AIM++L G+I + +R +VA
Sbjct: 289 QSSLFSFKGQKQTKPLTTFMPNRFA-AWCQGTTPYPLVNAIMKELNATGFITNRSRQIVA 347
Query: 362 CFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKT 421
L +L + W GA FE L+D+D + N GNW +++ + R ++ Q+
Sbjct: 348 SCLV-NELGLDWRYGAAYFEQQLIDHDVAANWGNWQYIAGVGVDPRGGRHFNIEKQTQQF 406
Query: 422 DKEGVYIKKY 431
D + +Y KK+
Sbjct: 407 DPKSIYTKKW 416
>UniRef50_Q89AJ9 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Buchnera aphidicola (Baizongia pistaciae)|Rep:
Deoxyribodipyrimidine photo-lyase - Buchnera aphidicola
subsp. Baizongia pistaciae
Length = 478
Score = 122 bits (295), Expect = 1e-26
Identities = 73/209 (34%), Positives = 108/209 (51%), Gaps = 12/209 (5%)
Query: 234 FEKPNSSPNSIE-PSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWR 292
F K N E ST++LS ++S G +S + L + H L + +L+WR
Sbjct: 224 FNKYNFDQEIFELNSTSMLSAHLSIGVISPRQCVTLLFKEYPDIIHKLEECKWINELLWR 283
Query: 293 EFYYTAGTGVANFDKMVGNAICI-----QIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLK 347
EFY + F +G + +I W N +L W +G TGYP +DA MRQLK
Sbjct: 284 EFYQH----LLYFYPNIGQNQSLYHWENRIKWDNNLYYLNLWKQGNTGYPIIDAGMRQLK 339
Query: 348 QEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWL-SASAFFY 406
Q GWI + R + A FL + +L I W +G + F L+D D++ N GNW W+ S
Sbjct: 340 QLGWISNRLRMITASFLVK-NLLIDWRKGEEYFMSQLIDGDFASNNGNWQWIASVGTDSM 398
Query: 407 KYFRVYSPVAFGQKTDKEGVYIKKYVPEL 435
YFR+++P+ +K D +I+KY+PEL
Sbjct: 399 PYFRIFNPMLQSKKFDINAKFIRKYIPEL 427
>UniRef50_Q0IDI4 Cluster: Deoxyribodipyrimidine photolyase; n=10;
Synechococcus|Rep: Deoxyribodipyrimidine photolyase -
Synechococcus sp. (strain CC9311)
Length = 492
Score = 122 bits (294), Expect = 2e-26
Identities = 68/197 (34%), Positives = 102/197 (51%), Gaps = 10/197 (5%)
Query: 246 PSTTVLSPYISHGCLSAKLFYYK---LKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGV 302
P T+ LS +S G +S + + +KE+ + +L WREFY A +
Sbjct: 257 PGTSYLSAGLSVGTVSPRQAWCAAQGVKEIARSDEQQQAITVWEQELCWREFYQQA---L 313
Query: 303 ANFDKMVGNAICIQ---IPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHM 359
+F ++ Q PW N + +AW EG+TG P +DA MRQL Q GW+H+ R +
Sbjct: 314 FHFPELADGPYREQWRRFPWENNSDWFEAWREGQTGMPIIDAAMRQLNQSGWMHNRCRMI 373
Query: 360 VACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQ 419
VA FL + DL W G + F + +D D + N G W W ++S K R+++P
Sbjct: 374 VASFLVK-DLICDWRWGERAFMELEVDGDLAANNGGWQWSASSGMDPKPLRIFNPATQAT 432
Query: 420 KTDKEGVYIKKYVPELK 436
K D EG YI+++VPEL+
Sbjct: 433 KFDAEGEYIREWVPELR 449
Score = 49.2 bits (112), Expect = 2e-04
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Query: 7 VIHWFRLDLRIHDNLALR--NAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLE 64
V+ W R DLR+ DNL L+ AI+ A ++L P P + RL FL++SL
Sbjct: 6 VLFWHRRDLRLADNLGLQAAEAISPAVTGVYVLDPALIQPPESLPPMAPARLWFLVESLR 65
Query: 65 XXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 124
+ L V+ G V LLP+L + + D++P ++D + +
Sbjct: 66 ELQQRWRDVGSRLLVVAGDPVQLLPRLASLLEAPAVVWSRDVEPYARERDRQVAKALQAD 125
Query: 125 G 125
G
Sbjct: 126 G 126
>UniRef50_A6VUF2 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Marinomonas sp. MWYL1|Rep: Deoxyribodipyrimidine
photo-lyase - Marinomonas sp. MWYL1
Length = 470
Score = 122 bits (294), Expect = 2e-26
Identities = 66/196 (33%), Positives = 99/196 (50%), Gaps = 3/196 (1%)
Query: 244 IEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVA 303
IEP+T+ LSPY++ G L + + N + + +L WR+FY +
Sbjct: 233 IEPATSTLSPYLALGALGPRQCLEAIFYTCNQEERRWQDSIWLKELAWRDFYRQLMSHFP 292
Query: 304 NFDKMVG-NAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVAC 362
K + W +N+ +AW EG+TG+P VDA MRQL Q GW+H+ R + A
Sbjct: 293 FLCKSRPFKPETSALIWRQNEEEFQAWCEGRTGFPIVDAAMRQLNQTGWMHNRLRMVAAS 352
Query: 363 FLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW-LSASAFFYKYFRVYSPVAFGQKT 421
F T+ ++ W G F L+D +++ N G W W S YFRV++P Q
Sbjct: 353 FFTK-LMFADWRRGEAYFMSKLIDGEFAANNGGWQWSASTGCDAAPYFRVFNPTRQSQTY 411
Query: 422 DKEGVYIKKYVPELKK 437
DK G +I+++VPEL K
Sbjct: 412 DKNGDFIRRFVPELTK 427
>UniRef50_A3JAL3 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Marinobacter sp. ELB17
Length = 441
Score = 122 bits (294), Expect = 2e-26
Identities = 106/436 (24%), Positives = 193/436 (44%), Gaps = 31/436 (7%)
Query: 8 IHWFRLDLRIHDNLALRNAI-NEAENRKHLLRPIYFLDPNIKDK-VGINRLRFLLQSLEX 65
++WF DLR+HDN AL A ++ +++ P +F ++ K +G +R RFL QSL
Sbjct: 4 LYWFTRDLRLHDNAALLAASKSDMLLCVYVVEPRWFKPGPLQCKTMGHHRWRFLWQSLIG 63
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 125
L++ G ++P L + + Q + ++D K
Sbjct: 64 LERSLRALGQRLHIAWGDPETVIPALAHGHVISRIVRSRQPGTREAVQWQTLQDKLPK-- 121
Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPL-----TYQKFLSLVKSINVKEPIEISNVLSSHC 180
+ T Y+ + E+ +PL T+ +F L++ + P +
Sbjct: 122 ------IAFTQYETLGLFTESLLPMPLQDLPTTFSQFRKLIEKKGDRGPSRLRIPTLKML 175
Query: 181 KPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSS 240
P ++ N E +E P + GGE L RL +++ + +++ ++
Sbjct: 176 PPAPGLPDD----NRGECPAIQEPTQPQAFRGGEQAGLARLQDFLAGTHAIDTYKETRNA 231
Query: 241 PNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYY---- 296
+ S++ SP+++HGCLSA+ + E L +++WRE++Y
Sbjct: 232 LDDWN-SSSKFSPWLAHGCLSAREVADSISLYEQQHTSNESTYWLWFEVLWREYFYWYAL 290
Query: 297 TAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLA 356
G+ + D + G + + KAW EG T YP V+A M QL++ G+I + +
Sbjct: 291 RHGSELFRRDGVQGKRQSVTFYGHR----FKAWCEGNTSYPLVNAAMNQLRETGYISNRS 346
Query: 357 RHMVA-CFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPV 415
R +VA CF+ +L + W GA FE L+DYD + N GNW +L+ + R ++
Sbjct: 347 RQLVASCFI--NELELDWRYGAAWFEQQLIDYDVASNYGNWQYLAGVGADPRGLRRFNLD 404
Query: 416 AFGQKTDKEGVYIKKY 431
Q+ D G +++++
Sbjct: 405 KQAQQYDPNGTFVERW 420
>UniRef50_Q0S6Q2 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;
Corynebacterineae|Rep: Deoxyribodipyrimidine photo-lyase
- Rhodococcus sp. (strain RHA1)
Length = 446
Score = 122 bits (293), Expect = 2e-26
Identities = 111/440 (25%), Positives = 189/440 (42%), Gaps = 41/440 (9%)
Query: 6 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEX 65
T + WFR DLR+ D L + ++E+ R ++ LD + G R FL +SL
Sbjct: 3 TALVWFRRDLRLGD-LPTLHTVSESGARA---LGLFVLDDRLLTTSGGARRDFLFRSLAA 58
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 125
L V++G VD++P++ + + D P ++D + + +
Sbjct: 59 LDDQLDGR---LLVVKGDPVDVVPRVAKKVSAEEVHVSADYGPYGRERDAAVAEHVD--- 112
Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDI 185
+ + V + + +G + + + PI+ + P D+
Sbjct: 113 -LVATGSPYAVAPGR--VTKTDGEPYRVFTPYFRQWLEHGWRAPIDTGSATVEWLDPNDV 169
Query: 186 QSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIE 245
++ +IP E P GE AL+R + + +E P
Sbjct: 170 KARRVAIPE------PESDGCPA----GEAAALQRWAEFCDDD--LAGYEDARDRPGL-- 215
Query: 246 PSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFY-----YTAGT 300
+T+ +S Y+ +G + + L R+ + QL WR+FY +
Sbjct: 216 DATSRMSVYLKYGNIHPRTMLRDL-----ARRRSTSAEQYRRQLAWRDFYADILFQRPDS 270
Query: 301 GVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMV 360
N+D+ + I +A+ AW EG+TG+P VDA MRQLK E W+H+ R +V
Sbjct: 271 ARGNYDRRFDH-IRYDSGSDAEEAYT-AWCEGRTGFPIVDAGMRQLKAEAWMHNRVRMIV 328
Query: 361 ACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF-FYKYFRVYSPVAFGQ 419
A F + DL + W GA+ F + L+D D + N W W + S YFRV++P G+
Sbjct: 329 ASFFVK-DLHLPWWRGARYFMNQLVDGDLANNQHGWQWTAGSGTDASPYFRVFNPTTQGE 387
Query: 420 KTDKEGVYIKKYVPELKKYP 439
K D +G Y++++VPEL+ P
Sbjct: 388 KFDPDGEYVRRWVPELRGIP 407
>UniRef50_Q6BZK7 Cluster: Similar to tr|O93963 Trichoderma harzianum
DNA photolyase; n=2; Saccharomycetaceae|Rep: Similar to
tr|O93963 Trichoderma harzianum DNA photolyase -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 555
Score = 121 bits (292), Expect = 3e-26
Identities = 86/261 (32%), Positives = 135/261 (51%), Gaps = 22/261 (8%)
Query: 187 SENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSI-E 245
SE +P K L D++ + GE EA L++++ KF+K + S N I E
Sbjct: 258 SEIPQVPESKRLTHDQQKEFDTCWKCGEHEAWLALSVFLESD----KFKKYDESRNEISE 313
Query: 246 PSTTVLSPYISHGCLSAK-LFYYKL-----KEVENGRQHTLPPVSLMGQLMWREFYYTAG 299
S + +S IS G +S + + Y L K++++G Q T + Q+ WR+FY
Sbjct: 314 ESVSRMSCPISSGIISTRSIIRYILENKFVKKIDSGEQGT----GWIRQIAWRDFYRHIL 369
Query: 300 TG---VANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLA 356
V F + + W N W +GKTG+P VDA MRQL Q G++H+
Sbjct: 370 CNWPYVCMFKPFLLEYD--DLNWEYNSDHFYKWCQGKTGFPIVDAAMRQLNQTGYLHNRC 427
Query: 357 RHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFF-YKYFRVYSPV 415
R +VA FL++ L I W+ G F ++L+D D++ N G W + S++ YFR+++P
Sbjct: 428 RMIVASFLSK-HLLIDWKYGEYYFMEHLIDGDFASNNGGWGFSSSTGVDPQPYFRIFNPW 486
Query: 416 AFGQKTDKEGVYIKKYVPELK 436
++ DK+G YI+ +VPELK
Sbjct: 487 LQSERFDKKGTYIRTWVPELK 507
>UniRef50_Q5QV18 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Idiomarina|Rep: Deoxyribodipyrimidine photolyase -
Idiomarina loihiensis
Length = 468
Score = 120 bits (290), Expect = 6e-26
Identities = 74/234 (31%), Positives = 113/234 (48%), Gaps = 9/234 (3%)
Query: 210 YHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKL 269
+ GE + L +L ++ V +++ P E T+ LS Y++ G + + L
Sbjct: 197 WSAGEQQVLGKLGQFVGHS--VDDYQQARDLP--AENGTSQLSAYLAQGVIGPQTAVRAL 252
Query: 270 KEVENGRQHTLPPVS--LMGQLMWREFYYTAGTGVANFDKMVG-NAICIQIPWTKNDAFL 326
+ L + + +L WREFY V K + I W ++D
Sbjct: 253 HKFSPEFPFGLASGADTWLTELAWREFYQHLMYFVPRLSKGESFQSETDSIQWLEDDDAF 312
Query: 327 KAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLD 386
+ W +G+TGYP VDA MRQL GW+H+ R + A FL + DL + W +G F +L+D
Sbjct: 313 QRWCDGRTGYPIVDAGMRQLTSTGWMHNRLRMITANFLVK-DLLVDWRKGEAFFMQHLID 371
Query: 387 YDWSLNAGNWMW-LSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYP 439
+ N G W W S YFRV++PV +K D +G YI+K+V ELK+ P
Sbjct: 372 GSFPANNGGWQWSASVGTDAVPYFRVFNPVKQSEKFDPDGQYIRKWVEELKEVP 425
>UniRef50_A6EG08 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Pedobacter sp. BAL39|Rep: Deoxyribodipyrimidine
photolyase - Pedobacter sp. BAL39
Length = 410
Score = 120 bits (289), Expect = 8e-26
Identities = 103/381 (27%), Positives = 176/381 (46%), Gaps = 23/381 (6%)
Query: 29 EAENRKHLLRPIYFLDPNIKD-------KVGINRLRFLLQSLEXXXXXXXXXXTCLYVLR 81
EA ++ + P+YF DP D K G++R +FLL+S+ L VL
Sbjct: 4 EAISKSDSILPVYFFDPYYFDPTQFNTVKTGMSRTKFLLESVAALRASFQQLGGDLLVLY 63
Query: 82 GKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHK 141
GK +L+ L D +++ + ++ PE Q +ED+ K + + + HT+Y+ +
Sbjct: 64 GKPEELMAGLVDQYEISEVYHHREVAPEETQISTKVEDLLWKLKINLRHFIGHTLYN-KE 122
Query: 142 VLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLS-SHCKPIDIQSENY-SIPNLKELQ 199
L +P + +F K ++ + S LS H + +++E++ +P LK+L
Sbjct: 123 DLPFPIKDIPDVFAQF----KKKTERDAMVKSCFLSPDHIE--FVENEDWGQLPGLKDLG 176
Query: 200 IDEETLAPVK--YHGGETEALKRL-NLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYIS 256
+EET + GGE L+ L +L + K+ S+ E ++ LS ++S
Sbjct: 177 FEEETFPGEEDALRGGEEAGLQHLSDLLLEGAAVYQKYTAKQSAER--EAFSSRLSGWLS 234
Query: 257 HGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFY-YTAGTGVANFDKMVGNAICI 315
GCLS ++ Y+ +KE E+ ++ L+WR++Y + F K
Sbjct: 235 LGCLSPRMVYWMVKEAESKFGSNANFNQMLLGLLWRDYYRFMFKKHGTRFFKEPDFESDF 294
Query: 316 QIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEE 375
++ LK W TGYP +D M +L G+I + R +VA +L L + W
Sbjct: 295 FSSVDPANSVLKKWKTADTGYPLIDNYMTELNDTGYISYTGRLVVATYLVH-FLKVHWTN 353
Query: 376 GAKIFEDYLLDYDWSLNAGNW 396
GA FE+ L+DY + N GNW
Sbjct: 354 GAVYFEEKLIDYAPASNWGNW 374
>UniRef50_A3ETQ4 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Leptospirillum sp. Group II UBA
Length = 536
Score = 120 bits (289), Expect = 8e-26
Identities = 72/230 (31%), Positives = 125/230 (54%), Gaps = 13/230 (5%)
Query: 213 GETEALKRLNLYMSK--KEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLK 270
GE A +RLN ++ K K + K + + E ++++LSP++++G +S + ++ ++
Sbjct: 262 GEEGARRRLNAFLEKRLKNYAVKRDFLD------EDTSSLLSPHLANGEISIRSVWWSIR 315
Query: 271 EVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWA 330
E + + +L WREF + +I W ++ + L AW
Sbjct: 316 ESTAPEEDR---AKFLSELGWREFSAHLMWHHPDLATQPLQKGRPEIAWREDPSSLLAWQ 372
Query: 331 EGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWS 390
+G+TG P VDA MRQL++ G++ + R + FL + +L I W +G + F D L+D+D +
Sbjct: 373 KGRTGIPLVDAGMRQLRRLGFLPNRVRMVAGSFLVK-NLLIDWRKGREWFSDNLVDHDPA 431
Query: 391 LNAGNWMWLSA-SAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYP 439
NA +W W+S A +FR+++PV G+K D EG Y+K Y+PEL + P
Sbjct: 432 NNAASWQWISGYGADAAPWFRIFNPVLQGEKFDPEGRYVKTYLPELARIP 481
>UniRef50_Q5DZH3 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Vibrio fischeri ES114|Rep: Deoxyribodipyrimidine
photolyase - Vibrio fischeri (strain ATCC 700601 /
ES114)
Length = 479
Score = 120 bits (288), Expect = 1e-25
Identities = 68/191 (35%), Positives = 100/191 (52%), Gaps = 4/191 (2%)
Query: 248 TTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANFDK 307
T+ LSPY++ G +SAK +L N + + L +L+WREFY N K
Sbjct: 242 TSQLSPYLAIGAISAKQCALRLHLEANYELNQGEDIWL-DELIWREFYTHLLHFYPNLSK 300
Query: 308 -MVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTR 366
+ I W N + W +G+TG+P VDA M+QL GW+H+ R + A FL +
Sbjct: 301 NQAFLSYDKYIEWDNNLDHFERWCKGETGFPIVDAAMKQLNTTGWMHNRLRMITASFLVK 360
Query: 367 GDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW-LSASAFFYKYFRVYSPVAFGQKTDKEG 425
DL I W G + F L+D D++ N G W W S YFR+++P+ G+K D +
Sbjct: 361 -DLHIDWRWGEQYFMSKLIDGDFASNNGGWQWCASVGCDSSPYFRIFNPITQGKKFDADC 419
Query: 426 VYIKKYVPELK 436
+IK ++PELK
Sbjct: 420 TFIKHWLPELK 430
>UniRef50_Q7M8M8 Cluster: DEOXYRIBODIPYRIMIDINE PHOTOLYASE DNA
PHOTOLYASEPHOTOREACTIVATING ENZYME; n=1; Wolinella
succinogenes|Rep: DEOXYRIBODIPYRIMIDINE PHOTOLYASE DNA
PHOTOLYASEPHOTOREACTIVATING ENZYME - Wolinella
succinogenes
Length = 447
Score = 119 bits (287), Expect = 1e-25
Identities = 106/436 (24%), Positives = 200/436 (45%), Gaps = 48/436 (11%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGIN--RLRFLLQSLEXXX 67
WFR DLR+ DN A E + P++ D ++ + R+ ++ +
Sbjct: 6 WFRRDLRLEDNRTFEQASGE-------VLPLFIFDSHLLSPLPKEDRRVGYIYGEVMRLK 58
Query: 68 XXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVF 127
L + G+ + +L +L + + Q D D + +DE ++ + + V
Sbjct: 59 SELRARGLDLAIFYGEPLKILSRLKEQGFSRLFASQ-DYDSYALSRDEAARELLDCRFVL 117
Query: 128 INKRVQHTVYDVHKVLRENNGAVPLT---YQKFLSLVKSINVKEPIEISNVLSSHCKPI- 183
N ++D ++VL++ + Y + L ++ + + +++ L+ + P
Sbjct: 118 DNY-----LFDPNEVLKKEGSPYTIFSAYYNQSLKILSEGHYAKGLDLPKKLAPYPIPAP 172
Query: 184 -DIQSENYS-IPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSP 241
++S +S +P L+ L+I + KRL + SK + ++ S
Sbjct: 173 PSLESMGFSPLPLLESLKILPQ---------------KRLEEFSSK---ITRYALDRDSL 214
Query: 242 NSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTG 301
+ +T+ LS ++ G L + +LK + P Q++WREFY
Sbjct: 215 EA--EATSGLSLFLRFGTLGVREVIRRLKVWQEEGIKVAP---FYRQILWREFYAMLLYH 269
Query: 302 VANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVA 361
+ ++ + Q+ W+++ L+ W +G+ G P VDA MR+L G++H+ AR + A
Sbjct: 270 FPHSEREDFKPM--QMRWSESQERLERWQKGECGVPLVDAGMRELNHTGFMHNRARMVCA 327
Query: 362 CFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSAS-AFFYKYFRVYSPVAFGQK 420
FLT+ +L + W G + F LLDYD + NAGNW W + S A +FR+++P K
Sbjct: 328 SFLTK-NLHLHWSWGERYFASKLLDYDVAQNAGNWQWCAGSGADAQPFFRIFNPYTQSLK 386
Query: 421 TDKEGVYIKKYVPELK 436
D +G Y+K+++PEL+
Sbjct: 387 FDPKGEYVKRWIPELR 402
>UniRef50_P12768 Cluster: Deoxyribodipyrimidine photo-lyase; n=6;
Actinomycetales|Rep: Deoxyribodipyrimidine photo-lyase -
Streptomyces griseus
Length = 455
Score = 119 bits (286), Expect = 2e-25
Identities = 110/428 (25%), Positives = 188/428 (43%), Gaps = 28/428 (6%)
Query: 11 FRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGI---NRLRFLLQSLEXXX 67
F DLR+HDN LR A+ +A+ + P++ D + + G N L FL L
Sbjct: 8 FTSDLRLHDNPVLRAALRDADE----VVPLFVRDDAVH-RAGFDAPNPLAFLADCLAALD 62
Query: 68 XXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVF 127
L V RG+A + ++ ++ + + ++++ I + G
Sbjct: 63 AGLRHRGGRLIVRRGEAATEVRRVAEETGAARVHIAAGVSRYAARREQRIREALADSG-- 120
Query: 128 INKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQS 187
R H V+D VP + ++ + E V + P ++
Sbjct: 121 ---RELH-VHDAVVTALAPGRVVPTGGKDHFAVFTPYFRRW--EAEGVRGTQTAPRTVRV 174
Query: 188 ENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPS 247
+ + + E L+P GGE K + +++ + +E + + +
Sbjct: 175 PDGVASDPLPDRDCVENLSPGLARGGEEAGRKLVTSWLNGP--MADYE--DGHDDLAGDA 230
Query: 248 TTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANFDK 307
T+ LSP++ G +SA ++ +E + G L + + QL WR+F++ D
Sbjct: 231 TSRLSPHLHFGTVSAAELVHRARE-KGG----LGGEAFVRQLAWRDFHHQVLADRP--DA 283
Query: 308 MVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRG 367
+ W + + AW G TGYP VDA MRQL EGW+H+ AR + A FLT+
Sbjct: 284 SWSDYRPRHDRWRSDADEMHAWKSGLTGYPLVDAAMRQLAHEGWMHNRARMLAASFLTK- 342
Query: 368 DLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVY 427
L++ W EGA+ F D L+D D + N NW W++ + + RV +PV G++ D G Y
Sbjct: 343 TLYVDWREGARHFLDLLVDGDVANNQLNWQWVAGTGTDTRPNRVLNPVIQGKRFDARGDY 402
Query: 428 IKKYVPEL 435
++ +VPEL
Sbjct: 403 VRGWVPEL 410
>UniRef50_P25078 Cluster: Deoxyribodipyrimidine photo-lyase; n=43;
Gammaproteobacteria|Rep: Deoxyribodipyrimidine
photo-lyase - Salmonella typhimurium
Length = 473
Score = 118 bits (284), Expect = 3e-25
Identities = 64/194 (32%), Positives = 101/194 (52%), Gaps = 3/194 (1%)
Query: 248 TTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANFDK 307
T+ LS ++ G LS + ++L + P + +L+WREFY T K
Sbjct: 236 TSRLSASLATGGLSPRQCLHRLLAEQPQALDGGPGSVWLNELIWREFYRHLMTWYPALCK 295
Query: 308 MVGNAICIQ-IPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTR 366
+ + W +N + +AW +G+TGYP VDA MRQL GW+H+ R + A FL +
Sbjct: 296 HQPFIRWTKRVAWQENPHYFQAWQKGETGYPIVDAAMRQLNATGWMHNRLRMITASFLVK 355
Query: 367 GDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW-LSASAFFYKYFRVYSPVAFGQKTDKEG 425
DL I W G + F L+D D + N G W W S YFR+++P G++ D++G
Sbjct: 356 -DLLIDWRLGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDRDG 414
Query: 426 VYIKKYVPELKKYP 439
+I++++P L+ P
Sbjct: 415 EFIRQWLPALRDIP 428
Score = 35.5 bits (78), Expect = 2.8
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 5 PTVIHWFRLDLRIHDNLALRNAINEAENR 33
PT + WFR DLR+ DNLAL A +A R
Sbjct: 2 PTHLVWFRRDLRLQDNLALAAACRDASAR 30
>UniRef50_Q5IFN2 Cluster: Cryptochrome DASH,
chloroplast/mitochondrial precursor; n=5; Eukaryota|Rep:
Cryptochrome DASH, chloroplast/mitochondrial precursor -
Ostreococcus tauri
Length = 546
Score = 118 bits (283), Expect = 4e-25
Identities = 121/479 (25%), Positives = 216/479 (45%), Gaps = 51/479 (10%)
Query: 1 MSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHL-LRPIYFLD-----PNIKD--KVG 52
M +T VI WFR DLR+ DN + A A + + P+Y D P+ + + G
Sbjct: 1 MGRTRVVI-WFRNDLRLLDNACVARAATLASESSDVEVVPVYVFDETYFKPSKRGLARFG 59
Query: 53 INRLRFLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLF----DDWQVKYLTCQVDIDP 108
R +F L+ + + L V GK+ D++ +L +D + + Q ++
Sbjct: 60 AGRGKFTLECVGDLKTSLRALGSDLLVRCGKSRDVIAELTLTGANDRTI--ILTQTEVTS 117
Query: 109 EFVQQDEYIEDIAEKK---GVFINKRVQH---TVYDVHKV---LRENNGAVPLTYQKFLS 159
E + D +E ++ G +H T+Y + V + +P + F +
Sbjct: 118 EETEMDVAVERATRERARGGAASATMERHWGSTLYHIDDVPFDVTSGLSDLPDVFTPFRN 177
Query: 160 LVKS-INVKEPI------EISNVLSS------HCKPIDIQSENYSIPNLKELQIDE--ET 204
V+S V++ I E+ +V +S KP D+ + I + +I + +
Sbjct: 178 KVESKCKVRDVIPAPTANELGHVPASVEGFEWMPKPSDLPFASSEIAMDCDKRIKDCLDE 237
Query: 205 LAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKL 264
+ + + GGE+ AL R+ Y+ + + + + + + + ST L+P+++ GC+S +
Sbjct: 238 RSVLDFKGGESNALARVKYYLWESDRLATYFETRNGMLGGDYSTK-LAPWLALGCVSPRH 296
Query: 265 FYYKLKEVENGRQHTLPPVSLMGQLMWREFY----YTAGTGVANFDKMVGNAICIQIPWT 320
+++ E+ R ++ +L+WR+F+ G + + D G + W
Sbjct: 297 VVSEIRRYESERVENKSTYWVIFELIWRDFFKFFALKHGNKIFHLDGTAGR----RASWK 352
Query: 321 KNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIF 380
+++ LKAW G TGYP +DA MR+L G++ + R VA +L D I W GA F
Sbjct: 353 RDEKILKAWKTGTTGYPLIDANMRELAATGFMSNRGRQNVASWLAL-DAGIDWRHGADWF 411
Query: 381 EDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYP 439
E +LLDYD + N GN W +A+ ++ + D G YIK +V EL + P
Sbjct: 412 EHHLLDYDTASNWGN--WCAAAGMTGGRINRFNIAKQTKDYDPAGEYIKTWVKELAEVP 468
>UniRef50_Q9HVD2 Cluster: Deoxyribodipyrimidine photolyase; n=22;
Proteobacteria|Rep: Deoxyribodipyrimidine photolyase -
Pseudomonas aeruginosa
Length = 481
Score = 117 bits (282), Expect = 5e-25
Identities = 69/204 (33%), Positives = 107/204 (52%), Gaps = 13/204 (6%)
Query: 246 PSTTVLSPYISHG------CLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAG 299
P T+ LSPY++ G CL A L + E G+Q + + +L+WREFY
Sbjct: 239 PGTSQLSPYLAAGVLSPRQCLDAALVANR-GEFSGGQQGA---ATWINELLWREFYKHIL 294
Query: 300 TGVANFDK-MVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARH 358
G + + W + A L+AW +G+TG P +DA MRQL GW+H+ R
Sbjct: 295 VGYPRVSRHRPFREETEALRWRQAPAELEAWQQGRTGIPIIDAAMRQLLATGWMHNRLRM 354
Query: 359 MVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW-LSASAFFYKYFRVYSPVAF 417
+VA FL++ +L I W EG + F +L+D D + N G W W S YFR+++P++
Sbjct: 355 VVAMFLSK-NLLIDWREGERWFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRLFNPLSQ 413
Query: 418 GQKTDKEGVYIKKYVPELKKYPRE 441
++ D G +I+ ++PEL R+
Sbjct: 414 SERFDPRGEFIRHWLPELAGLERK 437
>UniRef50_Q2G0A6 Cluster: Deoxyribodipyrimidine photolyase,
putative; n=15; Staphylococcus|Rep:
Deoxyribodipyrimidine photolyase, putative -
Staphylococcus aureus (strain NCTC 8325)
Length = 457
Score = 117 bits (282), Expect = 5e-25
Identities = 55/147 (37%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
Query: 288 QLMWREFYYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLK 347
+L++REFYY T QI W++N+A AW EG+TG+P +DA + +L
Sbjct: 259 ELIFREFYYVLMTQYPETSYQAFKPKYRQIKWSQNEADFNAWCEGQTGFPIIDAAIMELT 318
Query: 348 QEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW-LSASAFFY 406
Q G++H+ R +V+ FLT+ DL+I W G K F +L+DYD + N W W S
Sbjct: 319 QTGFMHNRMRMVVSQFLTK-DLFIDWTWGEKFFRKHLIDYDAASNIHGWQWSASTGTDAV 377
Query: 407 KYFRVYSPVAFGQKTDKEGVYIKKYVP 433
YFR+++P+ ++ D + +YIK Y+P
Sbjct: 378 PYFRMFNPIRQSERFDAKALYIKTYLP 404
>UniRef50_Q8D319 Cluster: PhrB protein; n=1; Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis|Rep:
PhrB protein - Wigglesworthia glossinidia brevipalpis
Length = 475
Score = 117 bits (281), Expect = 7e-25
Identities = 123/442 (27%), Positives = 198/442 (44%), Gaps = 35/442 (7%)
Query: 10 WFRLDLRIHDNLALRNA-INEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXXXX 68
WFR DLR++DN AL A ++E ++ +L I + V NR+RF+ +++
Sbjct: 7 WFRKDLRLNDNPALYYACVDEYKSASGIL--ILNKKKWNEKIVSKNRIRFMYKNIFSLKR 64
Query: 69 XXXXXXTCL--YVLRG--KAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEK- 123
L Y R + LL +VK L I+ E +++D+ I +K
Sbjct: 65 NLKKIGIELIFYTCRDFFEYTCLLYNFCYTNKVKELYFNKGIEKEDLEEDKIIIKKLKKI 124
Query: 124 -KGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKP 182
K + N + + D K+ +N + Y FL S I I
Sbjct: 125 TKCICFNGNL---LIDPEKIKNKNKKTYKV-YSYFLKSCISFISNNNINIIPFPKIRKNK 180
Query: 183 ID-IQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSP 241
++ I+S N SI K+L +P E AL +LN ++ K K + +
Sbjct: 181 LNLIKSYNDSIKIKKKL-------SPCY----EEHALNKLNNFIK-----LKINKYHITR 224
Query: 242 NSIEPSTTVLSPYISHGCLSAKLFYYKLKE--VENGRQHTLPPVSLMGQLMWREFYYTAG 299
+ ST+ LSPYI+ G LS + +K + + +++WREF +
Sbjct: 225 DFCINSTSFLSPYINIGVLSLRECINNIKNNNFDFIEKKNSGHFKWFSEIIWREFCHHLI 284
Query: 300 TGVANF-DKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARH 358
++F D I W ++AW G TG+P +DA MRQLK+ GW+H+ R
Sbjct: 285 IEYSDFFDSKKLIKWTKYIKWENKIKKIQAWKNGTTGFPIIDAAMRQLKKTGWMHNRLRM 344
Query: 359 MVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYK-YFRVYSPVAF 417
+ + FL + DL + W+ G K F +L+D + ++N NW W+S+S YFR+ +P+
Sbjct: 345 ITSSFLVK-DLLVDWKIGEKYFYYHLIDGNSAINNFNWQWISSSGICSSPYFRMINPITQ 403
Query: 418 GQKTDKEGVYIKKYVPELKKYP 439
+K YIK ++PELK P
Sbjct: 404 SKKFKSIYKYIKFWIPELKNIP 425
>UniRef50_A0JYK6 Cluster: Deoxyribodipyrimidine photo-lyase; n=11;
Bacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Arthrobacter sp. (strain FB24)
Length = 474
Score = 116 bits (280), Expect = 9e-25
Identities = 116/439 (26%), Positives = 188/439 (42%), Gaps = 19/439 (4%)
Query: 5 PTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLD---PNIKDKVGINRLRFLLQ 61
P+ I W R DLR+ DN AL +A H L +Y LD P ++ G + +L
Sbjct: 2 PSTIVWLRDDLRLDDNPALADAAAMG----HPLTVVYILDEESPGVRPLGGAAKW-WLHH 56
Query: 62 SLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIA 121
SL + L + RG A ++ +L + +L D ++ A
Sbjct: 57 SLVSLAGGLEAAGSRLVLRRGSAAGIIQELAAETGATHLRWNRRYGGPERSIDAGVKAWA 116
Query: 122 EKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVL---SS 178
++G+ +++ V G + + + ++S + P + L +
Sbjct: 117 GEQGLDAASFQASLMFEPWTVRTGAGGPYKVFTPFWRACLESGEPRIPSDGPGTLPHPAG 176
Query: 179 HCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPN 238
H QS++ L D ++ GE A RL ++ V ++
Sbjct: 177 HGDGGPPQSDDLDSWALLPRTPDWSAGLAEQWTPGEAGAHSRLKDFLDGP--VEEYGTGR 234
Query: 239 SSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTA 298
P +E T+ LSP++ G +S ++ L+E RQ +L WREF +
Sbjct: 235 DRPG-VE-GTSRLSPHLRFGEISPFRIWHALRE-RFPRQAPADVGIFRSELGWREFCWQL 291
Query: 299 GTGVANFDKMVGNAICIQIPW-TKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLAR 357
+ W T +DA L+AW +G+TGYP VDA MRQL Q GW+H+ R
Sbjct: 292 LYENPELASRNYRPDFDRFEWQTPSDAELEAWQQGRTGYPLVDAGMRQLWQTGWMHNRVR 351
Query: 358 HMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSAS-AFFYKYFRVYSPVA 416
A FL + +L W G F D L+D D + N NW W++ S A YFR+++PV
Sbjct: 352 MAAASFLVK-NLLADWRLGEAWFWDTLVDADSASNPANWQWVAGSGADASPYFRIFNPVT 410
Query: 417 FGQKTDKEGVYIKKYVPEL 435
+K D G Y+++++PE+
Sbjct: 411 QSKKFDAAGRYLREFIPEI 429
>UniRef50_Q389M9 Cluster: Deoxyribodipyrimidine photolyase,
putative; n=1; Trypanosoma brucei|Rep:
Deoxyribodipyrimidine photolyase, putative - Trypanosoma
brucei
Length = 568
Score = 115 bits (276), Expect = 3e-24
Identities = 125/482 (25%), Positives = 201/482 (41%), Gaps = 67/482 (13%)
Query: 5 PTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFL-----DPNIKDKVGINRLRFL 59
P + FR D R+ DN L I A + + P++F DP+ G FL
Sbjct: 21 PAAVFIFRRDFRVTDNTGLLLLIERAGKQSLPVIPLFFFNPRQCDPDKNPYFGKACFEFL 80
Query: 60 LQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDD-WQVKYLTCQVDIDPEFVQQDEYIE 118
QSL+ L LRG D L + + +K L DI P ++D +E
Sbjct: 81 CQSLKHLDTVQLGGR--LVCLRGSDCDCLEVVRSSGYDIKQLGFNRDITPFARKRDLQLE 138
Query: 119 DIAEKKGV-FINKRVQHTVYDVHKVLRENNGAVPL-------TYQKFLSLVKSINVKEPI 170
+ K+GV + + +T+ V +N + Q+ S +++ N K
Sbjct: 139 EWCVKRGVRCVTSNMDYTLLPPDVVTNKNGKPYRVFSPFYRAVLQEHFSDIQAPNPKATT 198
Query: 171 EISNVLSSHCKPIDIQS-------------ENYSIPNLKELQIDEETLAPVKYHGGETEA 217
SH K D+++ E S+ + +L +T + GG +E
Sbjct: 199 IGDIFTGSHVKE-DVKATVDQARRSAMAADEFSSLVDYVDLAALPQTFPELVDRGGRSEG 257
Query: 218 LKRLNLYMSKKEW-VCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGR 276
L RL S K + + + P TT LSP++ G +S + ++ + G+
Sbjct: 258 LLRLASVASAKNYSAIRDDIPGDK-------TTHLSPHLKFGTISIREAM-QVALLHLGK 309
Query: 277 QHTLPPVSLMGQLMWREFYY-----------------TAGTGVANFDKMVGNAICIQ--- 316
+H + QL+WREFY A G + N ++
Sbjct: 310 EH-----AFTRQLIWREFYSMLLYHNPRLALGQLKMDVAPQGERQCRATLANEPFLEKYS 364
Query: 317 -IPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEE 375
W NDA A+ G TG+P VDA +R L + GW H+ R ++A FL + L++ W E
Sbjct: 365 NFQWEWNDAEFTAFKSGATGFPLVDAAVRCLTKTGWCHNRCRMLIANFLVK-VLFVDWRE 423
Query: 376 GAKIFEDYLLDYDWSLNAGNWMWLSA-SAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPE 434
G + + +DYD + N+G W+W S A YFR ++P + D + V+IK++VPE
Sbjct: 424 GERWYATVAVDYDVANNSGGWLWSSGQGADAQPYFRFFNPFRQSAQHDPQAVFIKQWVPE 483
Query: 435 LK 436
L+
Sbjct: 484 LR 485
>UniRef50_Q2BJV5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Neptuniibacter caesariensis|Rep: Deoxyribodipyrimidine
photolyase - Neptuniibacter caesariensis
Length = 468
Score = 114 bits (275), Expect = 4e-24
Identities = 70/231 (30%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 209 KYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYK 268
++ G A K L Y+ +K V +++ P EP T+ LSPY+S G LS +
Sbjct: 205 RWPAGTEAAHKLLQHYVLEK--VADYKQSRDFP--AEPGTSSLSPYLSVGVLSTRQCLAA 260
Query: 269 LKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANFDKM--VGNAICIQIPWTKNDAFL 326
++ + Q + +L+WREFY ++ + ++ W +++
Sbjct: 261 MQAYFD--QPEWFDSQWVTELIWREFYRHLLVLFPEMNRWEPFKPEVEEKLSWQYDESLF 318
Query: 327 KAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLD 386
+AW +G+TG+ VDA M++L + GW+H+ R + A FLT+ L W GA+ F +L+D
Sbjct: 319 QAWCKGETGFAIVDAGMKELLETGWMHNRVRMITASFLTK-LLRQDWRLGARFFMQHLID 377
Query: 387 YDWSLNAGNWMW-LSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELK 436
D++ N G W W S A YFR+++P+ ++ D +G Y+ +YVP L+
Sbjct: 378 GDFASNLGGWQWSASVGADAAPYFRIFNPMRQAERFDAKGRYVGQYVPSLQ 428
>UniRef50_Q4P1D4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 655
Score = 114 bits (275), Expect = 4e-24
Identities = 67/200 (33%), Positives = 111/200 (55%), Gaps = 12/200 (6%)
Query: 245 EPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPP--VSLMG-QLMWREFYYTAGTG 301
E T+ +SPY++ G +SA+ + K++ G+ H V++ ++ +R+FY
Sbjct: 412 ENGTSRISPYLAAGVVSARECLRRTKQLTKGKLHVGRDSGVAMWNTEISFRDFYAHV--- 468
Query: 302 VANFDKM-VGNAICIQ---IPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLAR 357
+A + K+ +G+A + + W + + L AW +G+TGYP VDA RQ Q+G+IH+ R
Sbjct: 469 LAAWPKVCMGHAFITKYEDVVWETDSSTLDAWKQGRTGYPIVDAAQRQCIQQGYIHNRGR 528
Query: 358 HMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW-LSASAFFYKYFRVYSPVA 416
+ A FLT+ L W G + F +D D++ N G W W S YFR+++P++
Sbjct: 529 MISAMFLTK-HLLHDWRHGERHFSLNFIDQDFASNNGGWQWSASTGTDPQPYFRIFNPLS 587
Query: 417 FGQKTDKEGVYIKKYVPELK 436
+K D G YI+ +VPELK
Sbjct: 588 QSEKCDPHGDYIRHFVPELK 607
>UniRef50_A3J6I6 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Flavobacteriales|Rep: Deoxyribodipyrimidine photolyase -
Flavobacteria bacterium BAL38
Length = 486
Score = 114 bits (274), Expect = 5e-24
Identities = 104/437 (23%), Positives = 194/437 (44%), Gaps = 30/437 (6%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRF--LLQSLEXXX 67
WF+ DLR+HD+ AL A++ + K LL +Y +P++ + ++ F + QSLE
Sbjct: 5 WFKRDLRLHDHEALHEALSTSG--KTLL--LYIFEPSLMKDIHYSQRHFDFIKQSLEALQ 60
Query: 68 XXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFV-QQDEYIEDIAEKKGV 126
T + +++G+AV + KL ++ + + + ++D + + ++KG+
Sbjct: 61 KELQKYHTQILIIQGEAVPVFQKLTQVISIREIYSHQETGIKLTYERDLAVGKLLKEKGI 120
Query: 127 FINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQ 186
N+ + + V + + N + ++ K+ + + S K I+I+
Sbjct: 121 IWNEYITNGV--IRGIKNRKNWKED--WYDYMD-------KDCLPFNPTPRSFVKYIEIE 169
Query: 187 S-EN-YSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSI 244
EN + +P++K + P GG AL+ +N + ++ V + S P
Sbjct: 170 ELENAFDVPSIKTVH------NPNFQKGGVPTALRYMNSFFEER--VQNYSNHISKPELG 221
Query: 245 EPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVAN 304
+ LSPYI+ G +S + Y K E+ + + +L W+ + +
Sbjct: 222 RKGCSRLSPYIAWGNISIRQVYTKAWEMHQQGKFKRQISNFASRLRWQAHFIQKFEMEST 281
Query: 305 FDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFL 364
+ + N + N+ + KAW GKTG P VDA MR L G+++ R +V F
Sbjct: 282 MEFIAVNKGYRNLIQRVNEKYHKAWITGKTGVPLVDACMRCLNTTGYLNFRMRALVVSFY 341
Query: 365 TRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKE 424
T L+ W+ + LD++ ++ + + A RVY+PV + D +
Sbjct: 342 TH-HLFQPWQNCSPHLAQQFLDFEPGIHYPQ-IQMQAGVTGINTLRVYNPVKNSYEHDAD 399
Query: 425 GVYIKKYVPELKKYPRE 441
G +IKK+VPEL P E
Sbjct: 400 GTFIKKWVPELATIPAE 416
>UniRef50_A1SV39 Cluster: DNA photolyase, FAD-binding-domain
protein; n=1; Psychromonas ingrahamii 37|Rep: DNA
photolyase, FAD-binding-domain protein - Psychromonas
ingrahamii (strain 37)
Length = 448
Score = 113 bits (273), Expect = 7e-24
Identities = 101/403 (25%), Positives = 177/403 (43%), Gaps = 26/403 (6%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDP------NIKDK-VGINRLRFLL 60
++W DLRI+DN AL N A LL +Y +D N + K +G R +FL
Sbjct: 5 LYWVNKDLRINDNAAL----NLASKSDRLLC-VYVVDKQSFEANNFQSKPLGDIRWQFLQ 59
Query: 61 QSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDI 120
LE ++++ G + L +L + +Q+ T + ++ I +
Sbjct: 60 GCLEDFNESLSKLGQAMHIVYGDTLSTLMRLCESYQI---TDVITTKLPGTYENRLITQL 116
Query: 121 AEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSS-- 178
E+ +V K L +P++Y KF + + + EP+ L S
Sbjct: 117 NERLPELTIDQVDQFTLFTKKSLPFELDELPISYSKFRKKMAEVIIPEPVSTVQSLPSMF 176
Query: 179 HCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPN 238
P + + +P + ++ + ++ GGE + LK L Y S ++++
Sbjct: 177 DTLPAPTRFKPEWLPTVSAIKAKQG----FEFEGGEQQGLKHLRQYFSSNS-PAEYKQVR 231
Query: 239 SSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTA 298
++ + + S+ LSP+++ GC+S + L E E L +L+WRE+Y
Sbjct: 232 NNLDGWKNSSK-LSPWLNSGCISVRQVMNNLAEFEQQHGKNSSTECLYLELLWREYYQWV 290
Query: 299 GTGV-ANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLAR 357
V A + G A + + F K W G T Y V+A M +L+Q G++ + R
Sbjct: 291 HYKVGAKTYQFKGLAKHRPLTTFYPERFNK-WCLGNTPYSLVNAFMHELRQTGYLSNRGR 349
Query: 358 HMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS 400
+VA L +L + W GA FE+ L+DYD ++N GNW +++
Sbjct: 350 QIVASCLVN-ELSVDWRYGAAWFEEQLIDYDAAVNWGNWQYIA 391
>UniRef50_Q5V438 Cluster: Photolyase/cryptochrome; n=3;
Halobacteriaceae|Rep: Photolyase/cryptochrome -
Haloarcula marismortui (Halobacterium marismortui)
Length = 464
Score = 113 bits (272), Expect = 9e-24
Identities = 53/124 (42%), Positives = 77/124 (62%), Gaps = 1/124 (0%)
Query: 316 QIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEE 375
+I W ++ +AW G+TGYPF+DA MRQL+QEG+IH+ R VA FLT+ L + W E
Sbjct: 295 RIEWENDEDNFEAWKHGETGYPFIDAGMRQLEQEGYIHNRPRQNVASFLTK-HLLVDWRE 353
Query: 376 GAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPEL 435
GA+ F L+D+D + NA +W W +++ R++ PVA K D Y+ +YVPEL
Sbjct: 354 GARHFRKRLVDHDPANNAASWQWTASTGTDSVDVRIFDPVAQMSKYDSGADYVTEYVPEL 413
Query: 436 KKYP 439
+ P
Sbjct: 414 RGVP 417
Score = 41.5 bits (93), Expect = 0.043
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXXX 67
+ W + DLRI DN L A + E + P+Y LD ++ +G + FLL +
Sbjct: 11 VFWHQRDLRIPDNRGLTAAAADDE-----VLPVYVLDTDLLANIGKRQKAFLLAGVRALK 65
Query: 68 XXXXXXXTCLYVLRGKAVDLLPKLFDDW 95
L V +G AVD+L + D++
Sbjct: 66 QAYRDHGGELLVKKGTAVDVLSNVVDEY 93
>UniRef50_Q31DQ9 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=1; Thiomicrospira crunogena XCL-2|Rep:
Deoxyribodipyrimidine photolyase family protein -
Thiomicrospira crunogena (strain XCL-2)
Length = 479
Score = 112 bits (269), Expect = 2e-23
Identities = 98/440 (22%), Positives = 198/440 (45%), Gaps = 22/440 (5%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXXXXX 69
W + +LRI+ + AL A+ +++ + YF DP + +G +L SL+
Sbjct: 6 WLQRELRINHHPALEAAMAASDD----IIVAYFHDP--EQTIGAANTVWLANSLQQLQQD 59
Query: 70 XXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFIN 129
L+ L G L ++ Q++ + + F + ++ ++ V +
Sbjct: 60 FKTRHGRLWCLEGIFEQQLEQVIQTHQIEQVFYTFQLGHPFKAMQQQALNVCQRCQVPLR 119
Query: 130 KRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPI-EISNVLSSHCKPIDIQSE 188
+++L ++ + + +L + ++ EP + + L + + +
Sbjct: 120 AFETENWLHYNQLLNQSGQPYKVFTPFYNTLSRKLSELEPFSDPIDTLEKTARTVCQSGQ 179
Query: 189 NYSIPNLKELQIDEETLAPVKYHG--GETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEP 246
+ ++P + + H GE +A + +++ E + +E+ P +I+
Sbjct: 180 DQNLPQSLNQILARPWARKIMQHWQVGEHKAWSKFETFIT--EGLANYEQDRDFP-AID- 235
Query: 247 STTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSL-MGQLMWREF-----YYTAGT 300
T+ LSP++ G L ++ ++L +E + + + QL WREF ++ T
Sbjct: 236 GTSQLSPHLHFGELHSRAIVFELLSLETEPTIANQAIRVWLRQLAWREFARAILWHFPHT 295
Query: 301 GVANFD-KMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHM 359
F K + +++ +AW EG+TG P +DA M+QL + GW+H+ R +
Sbjct: 296 ETHPFQAKFETFYRPLAEDDSESSKNYQAWCEGRTGVPIIDAGMKQLWETGWMHNRVRML 355
Query: 360 VACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF-FYKYFRVYSPVAFG 418
VA +LT+ + I W GA+ F D L+D D + N W W++ Y+R+++PV
Sbjct: 356 VASWLTK-NADIDWRAGAQWFNDTLVDADPANNTLGWQWVAGCGVDAAPYYRLFNPVRQS 414
Query: 419 QKTDKEGVYIKKYVPELKKY 438
+K D G Y+++++PELK Y
Sbjct: 415 EKFDANGQYLRQWLPELKTY 434
>UniRef50_A3Y1I2 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Vibrionales|Rep: Deoxyribodipyrimidine photolyase -
Vibrio sp. MED222
Length = 466
Score = 112 bits (269), Expect = 2e-23
Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 8/271 (2%)
Query: 135 TVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQSENYSIPN 194
T++D H++ E + VP ++ KF LV+ ++V + + L + + + S + S
Sbjct: 141 TLFDQHELSFELS-KVPSSFTKFRKLVEHLDVNRNETVISALPPAVR-LALTSTSTSTST 198
Query: 195 LKELQIDEETLAPVK-YHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSP 253
+ + A + Y GGE L L Y S ++ +++ ++ + IE ST SP
Sbjct: 199 ISLFSSPNDESAVISDYWGGEDAGLAHLENYFSH-DYAFNYKQTRNAFDGIENSTK-FSP 256
Query: 254 YISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYY--TAGTGVANFDKMVGN 311
+++ GC+S K Y LK+ E + +L+WRE++Y G + F + +
Sbjct: 257 WLALGCVSPKTIYCHLKQFEADHGSNDSTYWIYFELLWREYFYWKCLSLGSSLFGETSNH 316
Query: 312 AICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWI 371
+ + L W G T YP VDA MRQL G++ + R + A L +L I
Sbjct: 317 KLDSSNSSATLNLNLAKWKSGNTNYPIVDACMRQLNTTGYMSNRGRQLAASCLIY-ELGI 375
Query: 372 SWEEGAKIFEDYLLDYDWSLNAGNWMWLSAS 402
W GA FE L+DYD + N GNW +++ +
Sbjct: 376 DWRHGAAYFESQLIDYDVASNWGNWAYIAGA 406
>UniRef50_A7D5J0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep:
Deoxyribodipyrimidine photo-lyase - Halorubrum
lacusprofundi ATCC 49239
Length = 514
Score = 111 bits (268), Expect = 3e-23
Identities = 59/152 (38%), Positives = 86/152 (56%), Gaps = 6/152 (3%)
Query: 288 QLMWREFYYTAGTGVANFDKMVGNAICIQ--IPWTKNDAFLKAWAEGKTGYPFVDAIMRQ 345
QL WREFY N + + N + I W + + AW G+TGYP VDA MRQ
Sbjct: 313 QLAWREFY--TQVLYHNPEVVTENYKEYEEGIAWRDDPDEIAAWKRGETGYPIVDAGMRQ 370
Query: 346 LKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW-LSASAF 404
L++E ++H+ R +VA FLT+ DL W G F + L D+D + ++G W W S
Sbjct: 371 LREEAFMHNRVRMIVASFLTK-DLLADWRHGYDYFRETLADHDTANDSGGWQWAASTGTD 429
Query: 405 FYKYFRVYSPVAFGQKTDKEGVYIKKYVPELK 436
YFR+++P+ G++ D + YIK+YVPEL+
Sbjct: 430 AQPYFRIFNPMTQGERYDPDAEYIKRYVPELR 461
Score = 46.0 bits (104), Expect = 0.002
Identities = 25/84 (29%), Positives = 39/84 (46%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXXX 67
+ W R DLR+ DN+ L A ++ + P++ DP++ D R+R LL L
Sbjct: 3 LFWHRRDLRVADNVGLAAATGTRDDGRGPAAPVFVFDPDVLDHASDVRVRRLLDGLAALR 62
Query: 68 XXXXXXXTCLYVLRGKAVDLLPKL 91
+ L V RG +LP+L
Sbjct: 63 DDYRDRGSDLLVARGAPETVLPEL 86
>UniRef50_Q5QXE0 Cluster: Cryptochrome DASH; n=4;
Gammaproteobacteria|Rep: Cryptochrome DASH - Idiomarina
loihiensis
Length = 449
Score = 111 bits (267), Expect = 4e-23
Identities = 124/450 (27%), Positives = 203/450 (45%), Gaps = 54/450 (12%)
Query: 11 FRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD-------KVGINRLRFLLQSL 63
FR DLR+ DNLAL EA R L + +P +G +R FL QSL
Sbjct: 21 FRNDLRVEDNLALY----EAAQRSETLICCFCFNPTQNKYGHYGIPAMGKHRFTFLQQSL 76
Query: 64 EXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDE-YIE---- 118
+ L VL G +L +L + QV D F+ Q + Y E
Sbjct: 77 KQLRTELEMRGQKLIVLTGTFDRILTELISERQV---------DAIFLSQHQGYYERLQL 127
Query: 119 DIAEKKGVFI--NKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVL 176
+ +++ F+ ++ +T++ ++ E +P T+ +F V+ ++ ++ N L
Sbjct: 128 GLLQQRFPFLPFHETPNNTLFSEQELPFEL-ADLPETFSQFRKKVEPLSRNFSVQPVNAL 186
Query: 177 SSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEK 236
S K N S P K ++E LA + GGE AL L Y S E +++
Sbjct: 187 PSLPK-------NISYPGFKAETLNE--LASDDFEGGERAALTHLTSYFSG-ESAGTYKQ 236
Query: 237 PNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLK--EVENGRQHTLPPVSLMGQLMWRE- 293
++ + S+T SP+++ GCLS + L+ E E G + +S +L+WRE
Sbjct: 237 TRNALDDFS-SSTKFSPWLAQGCLSVRQIMAALRAYETEFGENESSYWISF--ELLWREY 293
Query: 294 -FYYTAGTGVANFDKMVGNAICIQIPWTK--NDAFLKAWAEGKTGYPFVDAIMRQLKQEG 350
F+Y G F + + + P T ++ F K W G T YP V+A M+QL G
Sbjct: 294 FFWYALKHGKRLF---AFSGLSGKSPKTSFYSERFQK-WCSGNTPYPIVNACMKQLNATG 349
Query: 351 WIHHLARHMVA-CFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYF 409
++ + R +VA CF+ +L + W GA FE L+DYD S N GNW +L+ +
Sbjct: 350 YMSNRGRQLVASCFVH--ELSLDWRYGAAYFEQQLIDYDVSSNWGNWQYLAGVGADPRGH 407
Query: 410 RVYSPVAFGQKTDKEGVYIKKYVPELKKYP 439
R ++ ++ D + +I+++ +L P
Sbjct: 408 RQFNLEKQTERYDPDNEFIERWAGDLSGQP 437
>UniRef50_A4BJR5 Cluster: Putative deoxyribodipyrimidine photolyase;
n=1; Reinekea sp. MED297|Rep: Putative
deoxyribodipyrimidine photolyase - Reinekea sp. MED297
Length = 465
Score = 110 bits (265), Expect = 6e-23
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 14/232 (6%)
Query: 207 PVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFY 266
P++ E +AL RL+ + E V + P + T+ LS ++ GC S++
Sbjct: 198 PLQLPVTEDQALTRLDAFC---EEVRDYADRRDFP--ADNGTSQLSAALALGCTSSRQVA 252
Query: 267 YKLKEVENGRQH-TLPPVSLMGQLMWREFY-YTAGTGVANFDKMVGNAICIQIPWTKNDA 324
+ L R H +L + +++WR+FY Y N PW KN+
Sbjct: 253 HTLH-----RHHISLASDTFFSEIIWRDFYKYLLFHTPRLCLGEPYNEKWDAFPWQKNET 307
Query: 325 FLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYL 384
+L+ W EGKTG P VDA MRQL++ GW+H+ R + +L + L W +G F ++L
Sbjct: 308 WLERWREGKTGVPIVDAAMRQLRETGWMHNRLRMVTGMYLVK-ILQQDWRQGEAWFAEHL 366
Query: 385 LDYDWSLNAGNWMWLSASAF-FYKYFRVYSPVAFGQKTDKEGVYIKKYVPEL 435
D+D++ N G W W++++ YFR+++P ++ D G +I +V EL
Sbjct: 367 ADFDFAANNGGWQWVASTGVDAVPYFRIFNPYQQSKRFDPNGQFILTFVTEL 418
Score = 35.1 bits (77), Expect = 3.7
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 6 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYF 42
T + WFR DLR+ D+ AL A+N A+ ++ +R ++F
Sbjct: 2 TQLVWFRNDLRVSDHEALFQALNRAKQQQTPVRALFF 38
>UniRef50_Q4Q4G2 Cluster: Deoxyribodipyrimidine photolyase,
putative; n=3; Leishmania|Rep: Deoxyribodipyrimidine
photolyase, putative - Leishmania major
Length = 541
Score = 110 bits (265), Expect = 6e-23
Identities = 116/463 (25%), Positives = 203/463 (43%), Gaps = 53/463 (11%)
Query: 11 FRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDK-----VGINRLRFLLQSLEX 65
FR DLR+ DN L+ +EA R + P +F +P DK G +F +SL
Sbjct: 32 FRRDLRVVDNTGLQALCDEAVRRSIPVLPAFFFNPIQCDKKRNAYFGDAFFQFFCESLVD 91
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDD-WQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 124
L LRG D L ++ D ++VK L D P + +D + D A+K+
Sbjct: 92 LDGAAQLNGG-LVCLRGSDEDCLRRIRDSGYEVKVLGFNEDYTPFALARDRLLRDYADKQ 150
Query: 125 GVF-INKRVQHTVYDVHKVLRENNGAVPLT---YQKFLSL-VKSINVKEPIEISNVLSSH 179
G+ + +++ + +V++++ + Y KF + + + V + +S V +
Sbjct: 151 GIVCVTGPHDYSLRPLDEVVKDSEQPYSVFTPFYNKFTAEHARKVAVPLMVNVSKVQAM- 209
Query: 180 CKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNS 239
+ Q + +L + + + V+ HGG TE +KRL K++ +
Sbjct: 210 ---LVSQPKKCLEHHLVDPALVYTHMPQVQDHGGRTEGMKRLACVERLKQYA------DV 260
Query: 240 SPNSIEPSTTVLSPYISHGCLSAK-LFYYKLKEVENGRQHTLPPVSLMGQLMWREFY--- 295
+ T+ LSP++ G +S + +++ ++ + G T QL+WREFY
Sbjct: 261 RDDIAGDRTSHLSPHMKCGTVSTREVWHASVQALGTGHAFTR-------QLVWREFYAML 313
Query: 296 -YTAGTGV-ANFDKMVGNAICIQIPWTKNDA----------------FLKAWAEGKTGYP 337
+T + + +G ++ K +A +A+ EG+TG P
Sbjct: 314 AFTRPRLLQGQLNSFIGQQDIVKATQPKQNAPFQPLYDNYKWSWKAEHFEAFKEGRTGVP 373
Query: 338 FVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWM 397
VDA +R L GW H+ R +++ F + L I W E + F +DYD + N G W+
Sbjct: 374 LVDAAVRCLTATGWCHNRCRLVISNFAVK-VLGIDWRECERWFATVAVDYDVASNNGGWL 432
Query: 398 WLSA-SAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYP 439
W S A YFR ++ ++ D + +I ++VPEL K P
Sbjct: 433 WSSGQGADAQPYFRTFNAFRQSERFDPDCKFIFQWVPELAKVP 475
>UniRef50_Q15TU1 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Pseudoalteromonas atlantica T6c|Rep:
Deoxyribodipyrimidine photolyase - Pseudoalteromonas
atlantica (strain T6c / BAA-1087)
Length = 481
Score = 109 bits (262), Expect = 1e-22
Identities = 115/442 (26%), Positives = 187/442 (42%), Gaps = 28/442 (6%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGIN--RLRFLLQSLEXXX 67
W R DLR N A+ A++ +N + +YF D ++ ++ + Q L
Sbjct: 6 WLRTDLRSKWNSAIDYAVDNHDN----VTAVYFTTKEQWDTYNLSSHKVALIYQRLVNLH 61
Query: 68 XXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEK---K 124
L V+ G +P D K V + E+ + DE D+A K K
Sbjct: 62 KELAERNIELQVIEGSIYQAIPVRLKDICTKIGVTHVYCNAEY-EWDERQRDLAVKNILK 120
Query: 125 GVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPID 184
+ I + H V N P Y+ F K ++ V +H K D
Sbjct: 121 KIDIPLAMFHDTCLVKPTEIMNLKNEP--YKVFTPYFKRWLDTTLQQLPGVPDNH-KASD 177
Query: 185 I---QSENYSIPN---LKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPN 238
QS N SI LK +I+ + + K+LN ++ E+ + K
Sbjct: 178 TGLSQSANDSIQIDSLLKTNEIEISKEFSTNWPTTAAKITKKLNAFII--EFSPVYPKNR 235
Query: 239 SSPNSIEPSTTVLSPYISHGCLS-AKLFYYKLKEV-ENGRQHTLPPVSLMGQLMWREFYY 296
P S++ T+ +SPY+S G LS A+ ++ L+E ++ + + ++ WR+FY
Sbjct: 236 DIP-SVD-GTSKVSPYLSIGALSPAQCLFHVLQEYGDDALSLEHGAYTWIKEIAWRDFYR 293
Query: 297 TAGTGVANFDKMVGNAICIQ-IPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHL 355
+ + + Q W N AW GKTGYP VDA M L++ GW+H+
Sbjct: 294 YVMYHFPHVSRGLPFQKHYQHFKWESNQHHFDAWKAGKTGYPIVDAAMIALRETGWMHNR 353
Query: 356 ARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW-LSASAFFYKYFRVYSP 414
R +VA F + L + W+ F L+D D++ N G W W S YFR+++P
Sbjct: 354 LRMIVASFYCK-HLLLPWKWAEDYFMSQLIDGDYASNNGGWQWSASVGTDAAPYFRIFNP 412
Query: 415 VAFGQKTDKEGVYIKKYVPELK 436
++ D +G +IK ++PEL+
Sbjct: 413 TTQSERFDPKGEFIKTWLPELE 434
>UniRef50_Q4USX1 Cluster: Photolyase-like protein; n=6;
Xanthomonas|Rep: Photolyase-like protein - Xanthomonas
campestris pv. campestris (strain 8004)
Length = 484
Score = 109 bits (261), Expect = 2e-22
Identities = 100/436 (22%), Positives = 183/436 (41%), Gaps = 17/436 (3%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDK--VGINRLRFLLQSLEX 65
I WFR DLR+ DN ALR A++ H P+Y P+ + + G + +SL
Sbjct: 17 IVWFRRDLRLEDNPALRAALDAG----HDPIPLYIDAPHEEGQWAPGAASRAWRHRSLAA 72
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 125
+ L + +G + +L + + + +P +D I+ ++G
Sbjct: 73 LDASLRARGSALLIRQGDSAQVLDAVIAQTEAVAVYWNRKYEPATQPRDAQIKRSLRERG 132
Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDI 185
+ + +++ + + + + + + + + + + L P +
Sbjct: 133 LEVQSCNAALLFEPWTLATQQGRPYKVFTPFWRNALTQLRLPDAMPAPRSLPP--LPASL 190
Query: 186 QSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIE 245
+ NL ++ + GE A + L +++ + + + P+ +
Sbjct: 191 DGVHVDALNLLPTPAWDQGFWE-HWQPGEAGAHEMLEIFVDGA--LSGYRENRDRPDRV- 246
Query: 246 PSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANF 305
T+ LSP++ G ++ L E + ++ + QL WR+F Y +
Sbjct: 247 -GTSQLSPHLHFGEIAPWRIASTL-EAQRSARNGADIDGYIRQLGWRDFAYHLLHHFPDT 304
Query: 306 DKMVGNAICIQIPW-TKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFL 364
N W T + L AW G+TG P VDA +RQL GW+H+ R +VA L
Sbjct: 305 TTQNLNPRFAGFDWATVDPVTLDAWQRGRTGIPIVDAGLRQLWHTGWMHNRVRMIVASLL 364
Query: 365 TRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSAS-AFFYKYFRVYSPVAFGQKTDK 423
+ L + W EGA+ F D L+D D + N W W++ + A YFRV++PV +K D
Sbjct: 365 CK-HLRVHWLEGARWFWDTLVDADLANNTMGWQWVAGTGADAAPYFRVFNPVTQAEKFDP 423
Query: 424 EGVYIKKYVPELKKYP 439
+ YI +++PEL P
Sbjct: 424 QATYITRWIPELAALP 439
>UniRef50_A0UAX4 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;
Proteobacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Burkholderia multivorans ATCC 17616
Length = 476
Score = 109 bits (261), Expect = 2e-22
Identities = 77/238 (32%), Positives = 118/238 (49%), Gaps = 19/238 (7%)
Query: 213 GETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKE- 271
GE A +RL ++ E + ++ +P + T+ LS ++ +G ++ L+E
Sbjct: 204 GEGGAWERLEQFVD--EALAEYGDARDAPARL--GTSRLSAHLHYGEITPTQILRTLQER 259
Query: 272 VENGRQHTLPPVS-LMGQLMWREF-----YYTAGTGVANFDKMVGNAICIQIPWTKNDAF 325
V P + + +L WREF Y+ T ANFD W +D
Sbjct: 260 VARTSGSVRPDLEPFLRELGWREFAHHLLYHFPHTTDANFDARFD-----AFAWAPDDGE 314
Query: 326 -LKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYL 384
L W +G+TG P VDA MRQL Q GW+H+ R +VA FLT+ +L W GA+ F D L
Sbjct: 315 QLARWQQGRTGIPLVDAGMRQLWQTGWMHNRVRMVVASFLTK-NLRQHWRHGARWFWDTL 373
Query: 385 LDYDWSLNAGNWMWLS-ASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPRE 441
+D D + N W W++ A YFRV++P K D + Y+K+++PEL + P +
Sbjct: 374 VDADLANNTLGWQWVAGCGADAAPYFRVFNPYLQAAKFDPDAAYLKRWLPELSRLPAD 431
>UniRef50_Q712D5 Cluster: Cryptochrome 2; n=7; Oryza sativa|Rep:
Cryptochrome 2 - Oryza sativa (Rice)
Length = 651
Score = 109 bits (261), Expect = 2e-22
Identities = 119/460 (25%), Positives = 202/460 (43%), Gaps = 36/460 (7%)
Query: 1 MSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLR--F 58
M+ + + WFR DLRI DN AL A R ++ P++ P + + R +
Sbjct: 1 MAGSERTVVWFRRDLRIDDNPAL-----AAAARDGVVLPVFIWCPADEGQFYPGRCSRWW 55
Query: 59 LLQSLEXXXXXXXXXXTCLYVLRGKA-VDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYI 117
L QSL L ++R ++ ++ L + D L DP + +D+ I
Sbjct: 56 LKQSLPHLSQSLESLGCPLVLIRAESTLEALLRCIDSVGATRLVYNHLYDPVSLVRDDKI 115
Query: 118 EDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLS 177
+ G+ I +Y+ ++ +++G T+ + + PI+IS L+
Sbjct: 116 KKELSALGISIQSFNGDLLYEPWEIY-DDSGLAFTTFNMYWEKCMEL----PIDISPSLA 170
Query: 178 S-HCKPI-DIQS-ENYSIPNL-KELQIDEET---LAPVKYHGGETEALKRLNLYMSKKEW 230
P ++S + S+ +L E DEE+ L + G A K L ++S
Sbjct: 171 PWKLVPAPGLESVRSCSVDDLGLESSKDEESSNALLRRAWSPGWRNAEKMLEEFVS--HG 228
Query: 231 VCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFY-----YKLKEVENGRQHTLPPVS- 284
+ ++ K +T++LSPY+ G +S + Y ++K G +
Sbjct: 229 LLEYSKHGMKVEG--ATTSLLSPYLHFGEVSVRKVYQLVRMQQIKWENEGTSEAEESIHF 286
Query: 285 LMGQLMWREF--YYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAI 342
M + RE+ Y + ++GN PW ++ K+W +G TGYP VDA
Sbjct: 287 FMRSIGLREYSRYLCFNFPFTHEKSLLGN--LKHYPWKVDEERFKSWRQGMTGYPLVDAG 344
Query: 343 MRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSAS 402
MR+L GW H+ R +++ F + L I W G K F D LLD D + W ++S S
Sbjct: 345 MRELWATGWTHNRIRVIISSFAVK-FLLIPWTWGMKYFWDVLLDADLESDILGWQYISGS 403
Query: 403 -AFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPRE 441
++ R+ +P GQK D +GVY++ ++PEL + P E
Sbjct: 404 LPDGHELSRLDNPEVQGQKYDPDGVYVRTWIPELARMPTE 443
>UniRef50_Q15ZK4 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Alteromonadales|Rep: Deoxyribodipyrimidine photolyase -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 445
Score = 108 bits (260), Expect = 2e-22
Identities = 102/429 (23%), Positives = 189/429 (44%), Gaps = 21/429 (4%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRK--HLLRPIYFLDPNIKDK-VGINRLRFLLQSLE 64
I WFR DLR+HDN AL + + ++ P +F + + +G R FL QSL
Sbjct: 13 IFWFRHDLRLHDNPALVALSEQVDELLCVFIIDPRWFKSSHFQSAHMGDKRWAFLQQSLS 72
Query: 65 XXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 124
L+VL G+ +++L L + + + QQ + ++
Sbjct: 73 ELQRHLQEQGQQLFVLEGETLEVLDALIGSYTPDIVASGMHPGVYERQQWQRVKQ-GNPN 131
Query: 125 GVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPID 184
+FI + H+++ + E +P ++ F V+ + V + L
Sbjct: 132 TLFIQEN-GHSLFQPATLPFEIE-YLPASFTPFRKRVEDLQVAVALPAPTALPPAPDLAW 189
Query: 185 IQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSI 244
+ S+N + P K + + + GGE AL +L + + +++ + +
Sbjct: 190 LSSKNVNPPK-KAIGL--------AFTGGEDAALAQLEYTLFTSHNIKNYKQTRNGLDGW 240
Query: 245 EPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFY-YTAGTGVA 303
+ S+ LSP++++GCLS + + +L+ E+ + L +L+WRE++ + +
Sbjct: 241 DYSSK-LSPWLANGCLSVRQVFTELRRYESEYEKNDSTYWLYFELLWREYFQWHLFKYQS 299
Query: 304 NFDKMVGNAICIQIPWTKNDAFLKA-WAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVAC 362
+ G P T A A W +G+T YP V+A M+QL G++ + R +VA
Sbjct: 300 KLFQFSGTQDTR--PLTTFVALRFAMWCQGETPYPIVNACMKQLNHTGYMSNRGRQLVAS 357
Query: 363 FLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTD 422
L +L + W GA FE L+D+D + N GNW +LS + R + Q+ D
Sbjct: 358 CLVN-ELGVDWRFGAAYFEQQLVDFDVASNWGNWQYLSGVGVDPRGHRRFDLAKQAQQYD 416
Query: 423 KEGVYIKKY 431
G +++++
Sbjct: 417 PNGEFVRQW 425
>UniRef50_Q0BXN5 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=2; Rhodobacterales|Rep: Deoxyribodipyrimidine
photolyase family protein - Hyphomonas neptunium (strain
ATCC 15444)
Length = 536
Score = 108 bits (260), Expect = 2e-22
Identities = 106/444 (23%), Positives = 191/444 (43%), Gaps = 39/444 (8%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRF--LLQSLEXXX 67
WF+ DLR+HD+ AL A+ + P+Y +P +R +F + SLE
Sbjct: 14 WFKRDLRVHDHAALAAAVASGAP----ILPLYIFEPGYWALPEHSRRQFDFVRDSLEELD 69
Query: 68 XXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFV-QQDEYIEDIAEKKGV 126
T L + G A+D+ L + + + ++ +D + A G+
Sbjct: 70 AALKARGTKLVIRMGSAIDVFSALHQKHGIAAIHAHEETGLQWTFDRDRAVRRWARNAGI 129
Query: 127 FINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQ 186
+ ++ Q+ V + L+ +G ++ F+ + P V KP
Sbjct: 130 SLREQPQN---GVQRALQSRDGWAN-QWEAFM--------RRP---RLVAPEALKPSAAD 174
Query: 187 SENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEP 246
SE + +P L D+ P + GG A+ L ++ + ++K SSP +
Sbjct: 175 SEEWPLPQDFGLGADD---CPQRQKGGRMAAVDCLRSFLESRGRT--YQKSMSSPLTAAD 229
Query: 247 STTVLSPYISHGCLSAKLFYYKLKEV--ENGRQHTLPPVSLMG----QLMWREFYYTA-- 298
+ + LSP+++ G +S + + ++ E+GR + +G +L W +
Sbjct: 230 ACSRLSPHLAFGTVSIREAWQAAQKAQHEHGRSGDTGFAASIGSFISRLQWHCHFIQKLE 289
Query: 299 -GTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLAR 357
T + + + G P D L AW EG+TG+PF+DA MR L++ GW++ R
Sbjct: 290 DQTSIESRNLHPGYDGLRPEPLA-GDPRLAAWIEGRTGFPFLDACMRSLRETGWLNFRMR 348
Query: 358 HMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAF 417
MV F + LW+ W++ A+ D++ ++ SA+ R+Y+PV
Sbjct: 349 AMVMGFASH-HLWLDWKQPAEHLAALFTDFEPGIHYPQAQMQSATTGM-NTPRIYNPVKQ 406
Query: 418 GQKTDKEGVYIKKYVPELKKYPRE 441
Q D +G +I+++VPEL P E
Sbjct: 407 SQDQDPDGAFIRRWVPELSGLPAE 430
>UniRef50_Q42696 Cluster: CPH1; n=4; Viridiplantae|Rep: CPH1 -
Chlamydomonas reinhardtii
Length = 1008
Score = 108 bits (259), Expect = 3e-22
Identities = 109/452 (24%), Positives = 194/452 (42%), Gaps = 31/452 (6%)
Query: 6 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLR--FLLQSL 63
T + WFR DLR+ DN AL A+ A N + P++ P + + R + SL
Sbjct: 7 TAVVWFRRDLRVDDNPALVAALAAAPN----VIPVFIWAPEEEGQFQPGRCSRWWSKHSL 62
Query: 64 EXXXXXXXXXXTCLYVLRGK-AVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAE 122
+ L + R + L +L + + + DP + +D +
Sbjct: 63 VDLQQALAALGSRLVIRRSTDSTAALLQLVTELGAEAVFFNHLYDPISLMRDHDCKRGLT 122
Query: 123 KKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKP 182
GV +Y+ VL N T+ F + V+++ V P +S S P
Sbjct: 123 AAGVAHRTFNGDMLYEPWDVLDPNKQPYS-TFDDFWNSVRAMPVPPPFPVSAPASMPAVP 181
Query: 183 IDIQSENYSIPN---LKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNS 239
+ S + + E + + L K+ G A+ L +++++ + +FE +
Sbjct: 182 AAVPSMTVAEVDWFFTPEQEASSDQLK-FKWKPGVGGAISELEHFLAER--LTEFEHDRA 238
Query: 240 SPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVEN-----GRQHTLPPVSLMGQLMWREF 294
+ ST+ LSP+I G +S + +Y++++ + G + Q+ +RE+
Sbjct: 239 KVD--RDSTSRLSPWIHIGSISVRYIFYRVRQCQAEWLAAGTDRAQSCDDFLQQMGYREY 296
Query: 295 --YYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWI 352
Y + ++G+ PW + KAW +G+TGYP VDA MRQL GW
Sbjct: 297 SRYLAFHFPFIHERSLLGHLRAC--PWRIDQHAFKAWRQGQTGYPIVDAAMRQLWSSGWC 354
Query: 353 HHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS---ASAFFYKYF 409
H+ R + A FL + DL + W+ G K + D +D D +A W ++S + A + Y
Sbjct: 355 HNRGRVVAASFLVK-DLLLPWQWGLKHYWDAQIDADLECDALGWQYVSGGMSDAHPFSYM 413
Query: 410 RVYSPVAFGQKTDKEGVYIKKYVPELKKYPRE 441
A ++ D +G Y+++++P L + P E
Sbjct: 414 MDLEKEA--RRFDPDGEYVRRWLPALSRLPTE 443
>UniRef50_Q1G0Y2 Cluster: Cryptochrome dash; n=1; Karenia
brevis|Rep: Cryptochrome dash - Karenia brevis
(Dinoflagellate)
Length = 523
Score = 108 bits (259), Expect = 3e-22
Identities = 106/407 (26%), Positives = 175/407 (42%), Gaps = 26/407 (6%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRK--HLLRPIYFLDPNIKD--KVGINRLRFLLQSLEX 65
WFR DLR+ D AL A +A + ++ P F+D + K R RFL++SL
Sbjct: 24 WFRTDLRLDDQPALSTACEDALSLLPIYVFDPAKFIDLTLAGARKSSARRARFLIESLVN 83
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 125
+ L V G ++ L Y+T I E Q + +E ++ K
Sbjct: 84 LRRRLEDRGSGLAVAIGDPAVVIADLCASASAIYVT--QGICSEETQDEARVE--SKMKA 139
Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSIN-VKEPI----EISNVLSSHC 180
+ RV N PL + F + ++EP+ ++ ++ + C
Sbjct: 140 PALLSRVWGGSLYFPDECGCNPTKAPLLFSNFKKKAEVFGKIREPLAELTKLPSLPGAVC 199
Query: 181 KPIDIQSENYSIPNLKELQIDEETLAPVKYH---------GGETEALKRLNLYMSKKEWV 231
+P D+ +P L EL + E + ++ GGE AL RL ++ + +
Sbjct: 200 EP-DLSQALRFMPTLAELGFESEEINAAEFDDPRGVLPFSGGEDAALTRLQKWIWDDDHL 258
Query: 232 CKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMW 291
++ + E ++ SP+++ GCLS + + +++ E R L+ +LMW
Sbjct: 259 REYWMIRNGMKG-EGYSSKFSPWLALGCLSPRRVWKEVQRYEKERVKNKSTYWLVFELMW 317
Query: 292 REFY-YTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEG 350
R+F+ Y A T + G + W + L W GKTG VDA M +L G
Sbjct: 318 RDFFVYMALTHGDKLFRKGGITGDRKRSWPGSTTDLDRWKNGKTGDLLVDANMLELLATG 377
Query: 351 WIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWM 397
W+ + R VA +L ++ + W GA FE++LLDYD N GNW+
Sbjct: 378 WMSNRGRQNVASYLI-FNMRVDWRYGAAHFEEHLLDYDPCSNWGNWV 423
>UniRef50_A6H180 Cluster: Deoxyribodipyrimidine photolyase PhrB2;
n=1; Flavobacterium psychrophilum JIP02/86|Rep:
Deoxyribodipyrimidine photolyase PhrB2 - Flavobacterium
psychrophilum (strain JIP02/86 / ATCC 49511)
Length = 502
Score = 107 bits (257), Expect = 6e-22
Identities = 105/442 (23%), Positives = 188/442 (42%), Gaps = 26/442 (5%)
Query: 1 MSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIK--DKVGINRLRF 58
M K I WF+ DLR DN AL +A + L IY +P++ D + RF
Sbjct: 1 MEKKVVNIVWFKRDLRFTDNEALFHAHHSGLP----LLLIYVFEPSVMNYDDSDVRHWRF 56
Query: 59 LLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIE 118
+ +SL + +Y ++ + +L + V+ + +I + +
Sbjct: 57 VYESLLDMQLKLDLVASKIYFFHNESKIIFSELIKIFNVQTIFSHQEIGNKIT----FDR 112
Query: 119 DIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSS 178
DI E + F + + +H V+R+ Q + + + P ++
Sbjct: 113 DI-EMQAFFNKNNIIWKEFQLHGVIRKLKSR-----QNWDKKWEDVMRASP----RIIDL 162
Query: 179 HCKPIDIQSENYSIPNLKELQIDEETLAPVKYH-GGETEALKRLNLYMSKKEWVCKFEKP 237
I+I S+++ E+ E T + GGE A + L+ ++ KK +V + K
Sbjct: 163 KDLKIEILSDSFYQEFKGEILNPEITTHNKNFQQGGENFAWRYLDSFV-KKRYV-NYSKH 220
Query: 238 NSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYT 297
S P + LSPY+++G +S + Y + ++ ++ + +L W +
Sbjct: 221 ISKPLLSRKGCSRLSPYLTYGNISMRAIYQYTNQHYETSKNKRAILNFVSRLHWHCHFMQ 280
Query: 298 AGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLAR 357
+ N + KN+ ++KAW EGKTG P VDA MR L G+I+ R
Sbjct: 281 KFEDECTMEFENANRAYDVLIKPKNETYIKAWQEGKTGVPIVDACMRCLVTTGYINFRMR 340
Query: 358 HMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAF 417
MV F T +LW W E LDY+ ++ + + + R+Y+P+
Sbjct: 341 AMVVSFFT-FNLWQDWRE-LHFLARQFLDYEPGIHYPQ-IQMQSGTTGINTIRIYNPIKN 397
Query: 418 GQKTDKEGVYIKKYVPELKKYP 439
++ D EG++IK+++PEL + P
Sbjct: 398 SEEHDPEGIFIKQWLPELAEIP 419
>UniRef50_A0YV59 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Cyanobacteria|Rep: Deoxyribodipyrimidine photolyase -
Lyngbya sp. PCC 8106
Length = 512
Score = 107 bits (257), Expect = 6e-22
Identities = 116/457 (25%), Positives = 197/457 (43%), Gaps = 59/457 (12%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDK--VGINRLRFLLQSLEX 65
I WFR DLR+ DN + + +A + P + +DP + +G R++FL +SL
Sbjct: 3 ILWFRRDLRLIDN----DIVAQAAATDEEILPCFIIDPWFYQQPDIGGMRVQFLFESLAC 58
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 125
+ LY+ G +V+++ L + ++ P V + D K+
Sbjct: 59 LDGSLRDLGSRLYLFEGNSVEVIQTLTGE------LLELGYHPRLVFNRDIQVDYGRKR- 111
Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDI 185
H V + ++ L N L FL + + E L PI
Sbjct: 112 -------DHQVIEFYQRLGLN---CYLGLNNFLQIEGENREQWMNEYYADLRQPQHPIPT 161
Query: 186 QSENYSIP-NLKELQIDE-------ETLAPVKYHGGETEALKRLNLYMSKKE--WVCKFE 235
+ + IP NL +L DE + + GGE EA K LN ++ + + K
Sbjct: 162 KLKTPEIPLNLTQLTFDELQQKYNFNSQNSALFTGGEVEAQKTLNSWLKSRYNGYHWKLS 221
Query: 236 KPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLK----EVENGRQHTLPPVSLMGQLMW 291
+P + T+ LS +++ G +S + Y + K E++ + S L W
Sbjct: 222 RPQIATLG---GTSHLSAHLAFGTISTRQVYQQTKARANELKENAKAQFALKSFRNCLRW 278
Query: 292 RE-----FYYTAGTGVAN----FDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAI 342
R+ YY N FDK + ++ K + F +AW +GKTG+P VDA
Sbjct: 279 RDSAIQRLYYFPELAYQNCYPEFDKWYSDG---ELEGEKLEYF-QAWQQGKTGFPLVDAS 334
Query: 343 MRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSAS 402
M+QL+ GW++ R M A FLT +SW GA+ + +YL+D D ++N +W W + +
Sbjct: 335 MKQLQSMGWMNFRMRAMCANFLT-VICGVSWHHGARHYMNYLVDGDIAIN--HWQWQAQA 391
Query: 403 AF---FYKYFRVYSPVAFGQKTDKEGVYIKKYVPELK 436
FR+Y+P + D + +++ ++PEL+
Sbjct: 392 GVTNPLSSTFRIYNPTKNLTEKDPKFEFVRDWIPELR 428
>UniRef50_Q6EAM9 Cluster: Cryptochrome 2A apoprotein; n=4;
rosids|Rep: Cryptochrome 2A apoprotein - Pisum sativum
(Garden pea)
Length = 629
Score = 107 bits (256), Expect = 8e-22
Identities = 114/456 (25%), Positives = 198/456 (43%), Gaps = 32/456 (7%)
Query: 1 MSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLR--F 58
M T++ WFR DLRI DN AL A + + P++ P + + R+ +
Sbjct: 1 MGSNRTIV-WFRRDLRIEDNPALAAAARDGS-----VFPVFIWCPKEEGQFYPGRVSRWW 54
Query: 59 LLQSLEXXXXXXXXXXTCLYVLR-GKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYI 117
L QSL L +++ ++ L + + Q + DP + +D I
Sbjct: 55 LKQSLAHLDQSLKSLGAKLVLIKTDSTLNALLECVNAIQATKVVFNHLYDPVSLVRDHNI 114
Query: 118 EDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLS 177
++ + G+ + +Y+ ++ E A T+ F + EP+ + +
Sbjct: 115 KEKLVELGISVKSYNGDLLYEPWELYDEKGHAFT-TFDPFWERCLHKQM-EPVSL--IPP 170
Query: 178 SHCKPIDIQSENYSIPNL---KELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKF 234
P + E SI +L EL+ L + G A K L +M K+ + +
Sbjct: 171 WQLIPAKGKVERCSIEDLGLENELEKPSNALLGRAWSPGWGNANKALTEFMDKQ--LLNY 228
Query: 235 EKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYY--KLKEVENGRQHTL---PPVSL-MGQ 288
K ST++LSPY+ G LS + + ++K++ G + V+L +
Sbjct: 229 SKNRQKVGG--DSTSLLSPYLHFGELSVRKVFQMARVKQISWGNEGNSVGKESVTLFLRA 286
Query: 289 LMWREF--YYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQL 346
+ RE+ Y + ++G+ PW + + K W +G+TGYP VDA MR+L
Sbjct: 287 IGLREYSRYLCFNFPFTHERALLGHLSFF--PWNADPSNFKTWRQGRTGYPLVDAGMREL 344
Query: 347 KQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSAS-AFF 405
GW+H+ R +V+ F + L + W+ G K F D LLD D + W ++S
Sbjct: 345 WATGWMHNRIRVIVSSFAVK-MLLLPWKWGMKYFWDTLLDADLECDILGWQYISGCLPDG 403
Query: 406 YKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPRE 441
++ R+ P G K D EG Y+++++PEL + P E
Sbjct: 404 HELERLDDPEILGAKFDPEGEYVRQWLPELARMPTE 439
>UniRef50_Q2BAD6 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Bacillus sp. NRRL B-14911|Rep: Deoxyribodipyrimidine
photolyase - Bacillus sp. NRRL B-14911
Length = 474
Score = 104 bits (250), Expect = 4e-21
Identities = 105/431 (24%), Positives = 187/431 (43%), Gaps = 31/431 (7%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDP-NIKDKVGINRLRFLLQSLEXX 66
I WFR DLRIHD+ L A AE + P+Y +P + + +V ++F + LE
Sbjct: 3 IVWFRKDLRIHDHRPLAEACASAEE----VIPLYIAEPLSGRKEVSRRHIQFAAEGLEQL 58
Query: 67 XXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGV 126
L+ +G +D+L +L + L ++ D + D + KG+
Sbjct: 59 DEGLRGLGGRLFAAQGTIIDILEELLKRYGDFSLFFHLEYDTD---TDRLAAEWMGSKGL 115
Query: 127 FINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQ 186
Y H + P + +F L + ++E + + K D
Sbjct: 116 --------PFYPFHPPGQLEK---PKSKSRFRKLWQESMLEELTDPPAAVRVPEKVPDFL 164
Query: 187 SENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEP 246
N S+ +++ E + +GGE ++ L ++ E + +EK P +
Sbjct: 165 --NLSVQKALGMKVKGEAIR-FGQNGGEKRGIETLEFFIG--EQLANYEKNYQKPLASSF 219
Query: 247 STTVLSPYISHGCLSAKLFYYKL-KEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANF 305
S++ LSPY+++G +S +L Y++ K+ EN + +SL +
Sbjct: 220 SSSRLSPYLAYGNISPRLAYHEAAKKAENCTETEKQQLSLFQSKLLERSEALQWQE---- 275
Query: 306 DKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLT 365
+ NA + L+ W G TG P VDA MR L++ GW+++ +R M+A F
Sbjct: 276 KETQANAADSNSARAHDAELLEKWRTGNTGIPSVDASMRCLRKTGWLNYSSRRMLAGFAC 335
Query: 366 RGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEG 425
L + WE+ A LD++ +++ M + A K ++ PV +G++ D +G
Sbjct: 336 -NILLLDWEKAALELALLFLDHEPAVHMKE-MGILAGKSGSKTVKIIDPVKWGKELDTDG 393
Query: 426 VYIKKYVPELK 436
+I++YVPELK
Sbjct: 394 SFIRRYVPELK 404
>UniRef50_A4A625 Cluster: Deoxyribodipyrimidine photolyase; n=2;
unclassified Gammaproteobacteria|Rep:
Deoxyribodipyrimidine photolyase - Congregibacter
litoralis KT71
Length = 434
Score = 104 bits (250), Expect = 4e-21
Identities = 107/434 (24%), Positives = 191/434 (44%), Gaps = 21/434 (4%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXXX 67
I+WFR DLR+HDN L A E L P+ N + +G R RF+ +SL+
Sbjct: 4 IYWFRNDLRLHDNPGLVEAAKADELLLLYLWPLQRAWCNTQG-LGEQRERFITESLKALQ 62
Query: 68 XXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVF 127
L VL+G ++P L D+ V + + + + E+ +
Sbjct: 63 DDLQPLGQSLLVLQGSPELVIPDLVRDYGVDAVHASQCAGS---YETRAVRVLRERLHIP 119
Query: 128 INKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQS 187
+ + +T++ ++ +P ++ F V+ N+ EP++ S L P +
Sbjct: 120 VTEHAGNTLFR-RSDIKALCPELPRSFSPFRRKVEK-NL-EPLKPSRDLPQLPPPPAVTF 176
Query: 188 ENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPS 247
+ IP + + P++ GG + +RL ++ + +++ + + +E S
Sbjct: 177 --HRIP---DAAVKPPVGLPLR--GGSSAGQRRLKQFLHSGA-IRSYKETRNCLDPLEGS 228
Query: 248 TTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGT--GVANF 305
+T LSP+++ G LSA+ + E E L+ +L+WRE+++ GV+ F
Sbjct: 229 ST-LSPWLALGSLSAREVAAAVHEHEAQEGANESTYWLVFELLWREYFFHRALQDGVSLF 287
Query: 306 DKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLT 365
+ G + + F + W G T +P V+A+M QL GW+ + R + A L
Sbjct: 288 -RHGGREGKVSRCTFEPRNFAR-WCAGDTNHPLVNALMHQLVATGWMSNRGRQIAASCLI 345
Query: 366 RGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEG 425
D I W GA FE +L+DYD N GNW +++ + R ++ + D +G
Sbjct: 346 H-DFGIDWRYGAAFFEKHLIDYDVGSNYGNWQYIAGVGADPRGGRAFNIEKQTAQYDPDG 404
Query: 426 VYIKKYVPELKKYP 439
V+I K+ E P
Sbjct: 405 VFIAKWDGERAAQP 418
>UniRef50_Q6CSJ7 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 595
Score = 104 bits (250), Expect = 4e-21
Identities = 83/294 (28%), Positives = 154/294 (52%), Gaps = 26/294 (8%)
Query: 154 YQKFLSLVKSINVKEP----IEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVK 209
Y+K++S +++ N K+ IE S SS+ + ++ + Y +P+ ++ E+TL K
Sbjct: 277 YKKWVSFLEA-NQKDKHTICIEASIPQSSNREKVNPEEIKYQLPDKFMSEMPEQTLNIPK 335
Query: 210 YHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIE-PSTTVLSPYISHGCLSAKLFYYK 268
E ALK+L ++SK+ K N+ + ++ T++LS Y++ G +SA+ +
Sbjct: 336 --ADEETALKKLTEFISKRA-----SKYNNDKDLLDLTGTSLLSCYVTSGVISARTILNQ 388
Query: 269 LKEVENGR------QHTLPPVSLMGQLMWREFYYTAGT--GVANFDKMVGNAICIQIPWT 320
+ N R + + + ++ WR+FY A + + D + + I W
Sbjct: 389 SYQANNSRLMNKDIKKNNSLETFIKEVAWRDFYKHAISYWPFLSMD-LPFKFETLNIKW- 446
Query: 321 KNDAFL-KAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKI 379
+ND FL + W G+TG P VDAIM ++ + G+I++ +R + A FL + +L I W G +
Sbjct: 447 ENDVFLFEKWCYGETGIPIVDAIMLKMLKTGYINNRSRMITASFLAK-NLLIDWRWGERW 505
Query: 380 FEDYLLDYDWSLNAGNWMWLSASAF-FYKYFRVYSPVAFGQKTDKEGVYIKKYV 432
F +L+DYD + N G W + +++ YFRV++ +K D EG +I+ ++
Sbjct: 506 FRKHLIDYDTASNVGGWGFCASTGIDCQPYFRVFNMKLQSEKYDPEGKFIRHWL 559
Score = 36.7 bits (81), Expect = 1.2
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 7 VIHWFRLDLRIHDNLALRNAINEAEN 32
VIHWFR DLR+ DN L A+N++++
Sbjct: 72 VIHWFRGDLRVRDNTGLAYALNQSKS 97
>UniRef50_A5WDG4 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;
Psychrobacter|Rep: Deoxyribodipyrimidine photo-lyase -
Psychrobacter sp. PRwf-1
Length = 550
Score = 104 bits (249), Expect = 5e-21
Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 14/243 (5%)
Query: 206 APVKYHGGETEALKRLNLYMSK--KEWVCKFEKP---NSSPNSIEPSTTVLSPYI----S 256
A Y GE A+ RLN ++ + +E+ ++P +S S + ++SP + +
Sbjct: 258 ARADYPAGEQAAIDRLNSFVQQDIEEYGITRDQPALMGTSQLSAYLTLGIISPRLCYLTA 317
Query: 257 HGCLSAKLFYYKLKEVENGRQHTLPPVSL-MGQLMWREFYYTAGTGVANFDKMVG--NAI 313
+ L +K F ++E ++ V + +L WR+FY + K
Sbjct: 318 NARLESKSFADNESKLEIFENNSKSDVERWISELAWRDFYRHVTVDRPDIVKGAAYKKDT 377
Query: 314 CIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISW 373
++ W+ ++ +AW +G TG P +DA MR L Q G++H+ R + A FLT+ DL+I W
Sbjct: 378 DNKLNWSYDNDDFEAWCQGMTGVPLIDAAMRCLNQTGFMHNRLRMVTAMFLTK-DLFIDW 436
Query: 374 EEGAKIFEDYLLDYDWSLNAGNWMW-LSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYV 432
G + F L+D D++ N G W W S YFR+ +P + + DK+ ++IK ++
Sbjct: 437 RLGERYFMQNLIDGDFASNNGGWQWSASTGTDAAPYFRIMNPFSQAKTHDKDAIFIKSWL 496
Query: 433 PEL 435
PEL
Sbjct: 497 PEL 499
>UniRef50_A4IYV0 Cluster: Deoxyribodipyrimidine photolyase; n=14;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Francisella tularensis subsp. tularensis (strain
WY96-3418)
Length = 499
Score = 104 bits (249), Expect = 5e-21
Identities = 103/448 (22%), Positives = 191/448 (42%), Gaps = 42/448 (9%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQS--LEX 65
I WF+ DLR+ DNLAL A + + + P+Y ++ + + ++ ++L S LE
Sbjct: 3 IVWFKRDLRVTDNLALSLASEKGD-----ILPLYIIELELWQQPDMSHRQYLFLSECLEE 57
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 125
L ++ G AV++ +L + +K + + ++ Q DI +K
Sbjct: 58 LNTELTKLGQSLAIMLGDAVEIFEQLIQKYNIKNVWSHQETWNDWTYQ----RDIKLEKF 113
Query: 126 VFINKRVQHTVYD--VHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPI 183
N V H Y V + L + + L +Q+ + ++ P ++ + + K
Sbjct: 114 FKQNNIVWHQPYQNGVVRCLADRDNWALLWHQRMSEKI----IRAPTKLKFICENQIK-- 167
Query: 184 DIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNS 243
IP + L ++ + + GG AL+ L+ ++ ++ C + K SSP +
Sbjct: 168 --------IPTAESLGLEYDDCYK-RQKGGRIRALRILDSFLYQRG--CGYTKEMSSPVT 216
Query: 244 IEPSTTVLSPYISHGCLSAKLFYYK-------LKE--VENGRQHTLPPVSLMGQLMWREF 294
S + LSPYI+ G +S K Y K +KE V+N + S + +L W
Sbjct: 217 AFKSCSRLSPYIAFGVISLKEIYQKANQRKNEIKESSVKNKTKWLSAMRSFLSRLRWHCH 276
Query: 295 YYTAGTGVANFDKMVGNAICIQIPWTK-NDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 353
+ + + ++ Q+ N +AW G TGYP +DA MR L GW++
Sbjct: 277 FMQKLEDQPSIEYENLHSAYDQLRTEPLNQQCFEAWKTGNTGYPMIDACMRALIATGWLN 336
Query: 354 HLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYS 413
R M+ F + LW+ W + DY+ ++ + + + R+Y+
Sbjct: 337 FRMRAMLMSFASY-HLWLDWRVTSLYLARLFTDYEPGIHYSQ-VQMQSGTTGINSIRIYN 394
Query: 414 PVAFGQKTDKEGVYIKKYVPELKKYPRE 441
P+ D G +I++++PEL+ E
Sbjct: 395 PIKQSIDQDPNGEFIRRWLPELENVSNE 422
>UniRef50_Q3W0H9 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Frankia sp. EAN1pec|Rep: Deoxyribodipyrimidine
photolyase - Frankia sp. EAN1pec
Length = 409
Score = 103 bits (248), Expect = 7e-21
Identities = 55/153 (35%), Positives = 83/153 (54%), Gaps = 2/153 (1%)
Query: 288 QLMWREFYYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLK 347
+L WREFY G + + + + +AW G+TGYP VDA MRQL
Sbjct: 215 ELAWREFYADVLAGTPSSARTDLTDTLAALAYEPPGDTFEAWKWGRTGYPIVDAGMRQLL 274
Query: 348 QEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF-FY 406
EGW+H+ R + A F+ + DL + GA+ + + L+D D + N W W + +
Sbjct: 275 AEGWVHNRVRMIEASFVCK-DLNVHRTHGARWYLERLVDGDLASNNHGWQWTAGTGTDAA 333
Query: 407 KYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYP 439
YFRV++PV+ G+K D G YI+++VPEL+ P
Sbjct: 334 PYFRVFNPVSQGRKFDPAGEYIRRWVPELRGLP 366
>UniRef50_Q9RIY2 Cluster: Deoxiribopirymidine photolyase; n=1;
Streptomyces coelicolor|Rep: Deoxiribopirymidine
photolyase - Streptomyces coelicolor
Length = 415
Score = 102 bits (244), Expect = 2e-20
Identities = 46/105 (43%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
Query: 332 GKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSL 391
G+TGYP VDA MRQL+ +GW+H+ AR +VA FLT+ L++ W GA+ F D L+D D
Sbjct: 268 GRTGYPVVDAAMRQLRHQGWMHNRARLLVASFLTK-TLYVDWRIGARHFLDLLVDGDVVN 326
Query: 392 NAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELK 436
N NW W + + + RV +P+ ++ D +GVY++++VPEL+
Sbjct: 327 NQLNWQWAAGTGTDTRPHRVLNPLVQARRFDPDGVYVRRWVPELR 371
>UniRef50_A3JA18 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Marinobacter|Rep: Deoxyribodipyrimidine photolyase -
Marinobacter sp. ELB17
Length = 488
Score = 101 bits (243), Expect = 3e-20
Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 317 IPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEG 376
+ W D +AW G+TG P VDA MRQL + W+H+ R + A FLT+ +L+I W G
Sbjct: 326 LQWNTADEHFEAWKNGRTGIPMVDAAMRQLNETSWMHNRLRMVAAMFLTK-NLFIDWRRG 384
Query: 377 AKIFEDYLLDYDWSLNAGNWMW-LSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPEL 435
F L D + N G W W S YFRV++P+ G++ D +G +I+ +VPEL
Sbjct: 385 EAYFMSKLADGYLASNNGGWQWSASTGTDASPYFRVFNPMTQGERFDADGEFIRHWVPEL 444
Query: 436 KK 437
K
Sbjct: 445 AK 446
>UniRef50_A1ZF62 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Microscilla marina ATCC 23134|Rep: Deoxyribodipyrimidine
photolyase - Microscilla marina ATCC 23134
Length = 545
Score = 101 bits (243), Expect = 3e-20
Identities = 95/435 (21%), Positives = 181/435 (41%), Gaps = 29/435 (6%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKV--GINRLRFLLQSLEXXX 67
WF+ DLR+ D+ L+ AI LL +Y +P+++ I +F+ QS+E
Sbjct: 42 WFKRDLRLEDHAPLKAAIE--VGLPVLL--VYVFEPSLQQSPDWNIRHWQFVYQSIEDLN 97
Query: 68 XXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFV-QQDEYIEDIAEKKGV 126
L+ + D+ + Q+ + + +D ++ E+K +
Sbjct: 98 FELEDYQVKLHCFHAEVPDVFEYILKTHQIDKVFSHQETGIRLTYDRDRQMQQFFEQKDI 157
Query: 127 FINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQ 186
+ Q+ + + R+N +Q F+ KEP+ N+ P ++
Sbjct: 158 EWQEFEQNGI----QRGRKNRRGWAQDWQIFM--------KEPLATPNLAQLKAMPYEVT 205
Query: 187 SENYSIPNL--KELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSI 244
+ + +++ + + PV G A K L + K+ + ++ + P
Sbjct: 206 DFAFLFDYVTGQKIHLYSKNYQPV----GMRSAQKYLKAF--GKKCIVQYTTQHKQPALS 259
Query: 245 EPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVAN 304
S + LSPY++ G LS + Y +++ H + + L
Sbjct: 260 NQSNSHLSPYLAWGNLSVRQVYQHCQQLMIDSPHRANFETYLHHLRMHCQCIQKFEMEDY 319
Query: 305 FDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFL 364
+ GN +Q+ + L+AW G+TG+P VDA MR ++Q G+++ R ++ FL
Sbjct: 320 LEFEAGNEAYLQLEQNHKNDLLEAWKNGQTGFPLVDASMRCIRQTGYLNFQMRSLIVSFL 379
Query: 365 TRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKE 424
T LW SW G LDY+ ++ + + + +K ++ +P+ +K D +
Sbjct: 380 TH-HLWQSWHTGVHYLGQQFLDYEPGVHFVRFQAQAGAVDTHK-VKILNPIKVSKKCDPK 437
Query: 425 GVYIKKYVPELKKYP 439
+IKK+VPELK P
Sbjct: 438 AQFIKKWVPELKNIP 452
>UniRef50_A1SER8 Cluster: Deoxyribodipyrimidine photo-lyase; n=12;
Actinomycetales|Rep: Deoxyribodipyrimidine photo-lyase -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 453
Score = 101 bits (243), Expect = 3e-20
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 288 QLMWREFYYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLK 347
+L WREFY + ++ + + L AW G+TG+ VDA MRQL+
Sbjct: 262 ELAWREFYADVLHARPETARQYLRPEFARMRYDEPGEHLDAWRHGRTGFSVVDAGMRQLR 321
Query: 348 QEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS-ASAFFY 406
GW+H+ R + A FL + DL + W+ GA+ F +L+D D + N W W +
Sbjct: 322 ATGWMHNRVRMITASFLVK-DLHLEWQLGARHFLRWLVDGDLASNQHGWQWTAGCGTDAA 380
Query: 407 KYFRVYSPVAFGQKTDKEGVYIKKYVPEL 435
YFRV++P A G++ D G Y++++VPEL
Sbjct: 381 PYFRVFNPTAQGRRFDPRGEYVRRWVPEL 409
Score = 43.6 bits (98), Expect = 0.011
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 4 TPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSL 63
TP V+ WFR DLR+ DN AL A + + P++ LDP + G R +L SL
Sbjct: 5 TPAVL-WFRRDLRLADNPALVEAAADGP-----VLPLFVLDPVLWGPAGAARRAYLGASL 58
Query: 64 EXXXXXXXXXXTCLYVLRGKAVDLLPK 90
T L V+RG L+P+
Sbjct: 59 RALDASLRERGTRLSVVRGDPARLVPR 85
>UniRef50_P61496 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;
Thermus thermophilus|Rep: Deoxyribodipyrimidine
photo-lyase - Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039)
Length = 420
Score = 101 bits (242), Expect = 4e-20
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 13/192 (6%)
Query: 251 LSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANFDKMVG 310
LSPY + G LS +L ++ + G + V+ +L+WR+F Y + +F M
Sbjct: 212 LSPYFALGVLSPRLAAWEAER--RGGEGARKWVA---ELLWRDFSYHL---LYHFPWMAE 263
Query: 311 NAICIQ---IPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRG 367
+ + +PW +++A +AW EG+TG P VDA MR+L G++ + AR A F +
Sbjct: 264 RPLDPRFQALPWQEDEALFRAWYEGRTGVPLVDAAMRELHATGFLSNRARMNAAQFAVK- 322
Query: 368 DLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSA-SAFFYKYFRVYSPVAFGQKTDKEGV 426
L + W+ + F LLD D ++N W W YFRV++PV G++ D EG
Sbjct: 323 HLLLPWKRCEEAFRHLLLDGDRAVNLQGWQWAGGLGVDAAPYFRVFNPVLQGERHDPEGR 382
Query: 427 YIKKYVPELKKY 438
++K++ PE Y
Sbjct: 383 WLKRWAPEYPSY 394
>UniRef50_A4CPD0 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Flavobacteria|Rep: Deoxyribodipyrimidine photolyase -
Robiginitalea biformata HTCC2501
Length = 515
Score = 101 bits (241), Expect = 5e-20
Identities = 93/401 (23%), Positives = 170/401 (42%), Gaps = 11/401 (2%)
Query: 6 TVIHWFRLDLRIHDNLALRNAINEAENRK-HLLRPIYFLDPNIK-DKVGINRLRFLLQSL 63
T ++WFR DLR+ DN L A + P F + + ++G R FL +S+
Sbjct: 46 TALYWFRNDLRVTDNPGLLAACSSQRVLTVFCFDPADFREGDYGIRRMGPYRAGFLRESV 105
Query: 64 EXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVD-IDPEFVQQDEYIEDIAE 122
L++ G D+LP + + V L Q + E + D E +
Sbjct: 106 LALREQLQGLNISLHIHFGPPGDILPGMIKKYGVTDLHLQREWTRDECLALDAVREGLPP 165
Query: 123 KKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLV-KSINVKEPIEISNVLSSHCK 181
GV +++ Q ++ + ++ +P + F K ++V+ P + +
Sbjct: 166 --GVTVHEHYQQFLFHPEDLPYDSFDDIPDVFTGFRKKCEKHVSVRSPEDTPARREAVFA 223
Query: 182 PI-DIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSS 240
P D + + + D + P + GGE A RL Y + ++ +++ +
Sbjct: 224 PAGDGGLPGWEALGMAPPRADSRSAFP--FRGGEPAAWDRLQEYFWESRFLSTYKRTRNG 281
Query: 241 PNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGT 300
ST SP++++G LSA+ Y ++K E + L+ +L+WR+++
Sbjct: 282 LVGTRYSTK-FSPWLANGSLSARQIYREVKRYEQEVEKNRDTYWLVFELIWRDYFKYVSL 340
Query: 301 GVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMV 360
G ++ W + W +G+T F++A M++L+ GW+ + R
Sbjct: 341 KHGPKIFAPGGIREVERDWGASREAFARWTQGETDSDFINANMQELRLTGWMSNRGRQNT 400
Query: 361 ACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSA 401
A + ++ D+ W GA F+ LLDYD N GNWM+ SA
Sbjct: 401 ASYWSQ-DMGQDWRLGAAWFQYLLLDYDVHSNWGNWMYNSA 440
>UniRef50_Q41DS7 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Exiguobacterium sibiricum 255-15|Rep:
Deoxyribodipyrimidine photolyase - Exiguobacterium
sibiricum 255-15
Length = 400
Score = 100 bits (240), Expect = 7e-20
Identities = 107/427 (25%), Positives = 186/427 (43%), Gaps = 43/427 (10%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXXXXX 69
W+R DLR+ D+ AL A E + ++R ++ D G ++ F ++L+
Sbjct: 6 WYRKDLRVDDHEALTRACEEEK----IVRAVFVRQT--ADGRGKQQMTFEEETLQSLNEH 59
Query: 70 XXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFIN 129
L +L+G+ V+ L V Y ++ + E Q+ E +
Sbjct: 60 LVQLGIELTILQGETVEQLTSFIQPEDVVYFH-RMTGEYEARQEQE------------VQ 106
Query: 130 KRVQHTVYDVHKV-LRENNGAVPL--TYQKFLSLVKSIN-VKEPIEISNVLSSHCKPIDI 185
KR +Y+ + LR++ G+ L + F V+ EPIE P +I
Sbjct: 107 KRFNTRMYETQTLHLRDDIGSDELKRVFTAFRKRVEQDGRFAEPIEA---------PGNI 157
Query: 186 QSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIE 245
Q +P + D T P + GGE RL Y+ + + K E N +++
Sbjct: 158 QY--IELPQTRG-GYDPRTAFP--FIGGEAAGRNRLAAYLEQPIFTYK-ETRNGF--NVD 209
Query: 246 PSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANF 305
S+ LS ++++G LS + +L+ E L +L+WR+F++ +
Sbjct: 210 DSSK-LSAWLANGSLSPRRVMAELQRTEQEHGANESTYWLYFELLWRDFFHLTMRETGHR 268
Query: 306 DKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLT 365
++ W + A + +W G+TG PFVDA MR++K GW+ + R + A +L
Sbjct: 269 LFRSNGLKDGRLTWKTDQAAIDSWMAGETGEPFVDAFMREIKDTGWMSNRGRQITASYLI 328
Query: 366 RGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEG 425
DL W GA+ FE L+DYD + N GNW +++ + R ++P QK D
Sbjct: 329 H-DLKQDWRIGARYFEQQLIDYDVASNYGNWAYIAGVGNATRTPR-FNPEFQQQKYDPNR 386
Query: 426 VYIKKYV 432
I++++
Sbjct: 387 ALIRRWM 393
>UniRef50_A4GI46 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
uncultured marine bacterium EB0_41B09
Length = 424
Score = 100 bits (239), Expect = 9e-20
Identities = 100/411 (24%), Positives = 184/411 (44%), Gaps = 40/411 (9%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLD-PNIKD------KVGINRLRFLL 60
I+WFR DLR+ DNL+L AI ++ + +Y D + KD ++G +R +L
Sbjct: 4 IYWFRNDLRVIDNLSLNEAIESSDE----ILFVYMQDVQSFKDTEWGFSRMGPHRKLYLS 59
Query: 61 QSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQ-VDIDPEFVQQDE---Y 116
Q L L VD L KL + + + + C+ +D E Q+ +
Sbjct: 60 QGLNALQEKLSNYGHSLNYYLDDTVDGLLKLVEKFHIDRIYCESIDSHEELDQEIRLRGH 119
Query: 117 IEDIAE--KKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVK--EPIEI 172
D+ + G+F+N ++ + D+ P + KF ++S VK +P I
Sbjct: 120 KVDLYSYYQSGLFLNDQIPFNLNDL-----------PDVFTKFRKEIESREVKPIKPSLI 168
Query: 173 SNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVC 232
+ +++ +D +S + + + ++ ++ GGE + L Y S +
Sbjct: 169 NQRINAIKSIVDEESNEIEMEQMSYPK-SSFPISEDRFFGGEEKGFTFLEAYFSSNK-PS 226
Query: 233 KFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWR 292
++K + I+ ST SP+++ G +SA+ Y L E + +L+WR
Sbjct: 227 TYKKTRNELMGIDFSTK-FSPWLASGYISARQVYDFLLSYELNVIKNESTYWIFFELLWR 285
Query: 293 EFYYTAGTGVANFDKMVGNAICIQIPWTK---NDAFLKAWAEGKTGYPFVDAIMRQLKQE 349
E++ + K + + + + K +D + W EG+T F++A M++LK+
Sbjct: 286 EYFRLI---FKKYGKKIFHRYGLGLSDEKVSHSDENFELWKEGRTASNFINAGMKELKET 342
Query: 350 GWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS 400
G++ + R +VA +L +L W GA FE L+DYD S N NW +++
Sbjct: 343 GFLSNRMRQIVASYLV-NELSCDWRAGAAWFESQLIDYDVSSNHCNWAYIA 392
>UniRef50_UPI0000E0FEEE Cluster: Deoxyribodipyrimidine photolyase;
n=1; alpha proteobacterium HTCC2255|Rep:
Deoxyribodipyrimidine photolyase - alpha proteobacterium
HTCC2255
Length = 441
Score = 99 bits (238), Expect = 1e-19
Identities = 103/415 (24%), Positives = 185/415 (44%), Gaps = 38/415 (9%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDK----------VGINRLR 57
++WF DLR+ DNL L+ I + + + H + D + K +G +R R
Sbjct: 5 LYWFEHDLRLADNLPLQQTIAQID-QLHCIYIFNAADFSTTKKKGAGQFNQRHMGQHRYR 63
Query: 58 FLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYI 117
F+ Q+L+ L++ G+ +D++ +L + ++ V + I
Sbjct: 64 FIRQALDDLQSQLHTFGQQLHIYYGEPLDIIEQLNTQFNFTHIGKHFHTG---VYERNLI 120
Query: 118 E--DIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLV-KSINVKEPIEISN 174
I IN +T+YD+ + +P + F V K + P N
Sbjct: 121 SALKIQYPNKTIINTN-SYTLYDIDDLPMSIEN-LPDVFSPFRRKVEKFCEARLP---DN 175
Query: 175 VLSSHCKPIDIQSENYSIPNLKELQI-DEETLAP----VKYHGGETEALKRLNLYMSKKE 229
L P+ + +N L +Q+ D++ LA + GGE +A ++++ Y +
Sbjct: 176 ALPVSFPPVVVAEQNMP-DELPAIQVCDKKLLAKNETVQRLIGGELKAKEQMHHYTYGTQ 234
Query: 230 WVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQL 289
+ ++++ + E S+ LSP+++ GC+S + + E E L +L
Sbjct: 235 ALSEYKETRNGLEGWEFSSK-LSPWLAAGCISPRQVAAAITEYEAQHGANDSTYWLFFEL 293
Query: 290 MWREFYYTAGT--GVANFDKMVGNAICIQIP-WTKNDAFLKAWAEGKTGYPFVDAIMRQL 346
+WREF+ G A + + N I + P N + W G T YP ++A MRQL
Sbjct: 294 LWREFFQWQQLKHGKALYHR---NGIQQKSPRGFHNKKVFEDWVNGDTAYPIINACMRQL 350
Query: 347 KQEGWIHHLARHMVA-CFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS 400
K G++ + R +VA CF+ +L + W+ GA FE+ L+D+D + N GNW +L+
Sbjct: 351 KYTGFMSNRGRQLVASCFI--HELGLDWQYGAAYFEEALIDFDPASNWGNWQYLA 403
>UniRef50_Q9KK82 Cluster: Hypothetical DNA photolyase; n=3;
Actinomycetales|Rep: Hypothetical DNA photolyase -
Brevibacterium linens
Length = 487
Score = 99.5 bits (237), Expect = 2e-19
Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 4/188 (2%)
Query: 247 STTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANFD 306
ST+ LSP + HG LS + + + Q + + QL WREF + + D
Sbjct: 263 STSRLSPRLRHGELSPRQLLQAARTTSSLTQDDR--AAWIRQLYWREFSWHLTYHYPHID 320
Query: 307 KMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTR 366
P+ +D L W G TGYP +DA M QL Q GW+H+ R + A FLT+
Sbjct: 321 SAPIRPEFHNFPYEDDDDALTHWRAGTTGYPLIDAGMAQLWQTGWMHNRVRMVTASFLTK 380
Query: 367 GDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSAS-AFFYKYFRVYSPVAFGQKTDKEG 425
+L W G + F D L+D D + N +W W++ S A YFRV++P ++ D +
Sbjct: 381 -NLLQHWWFGEQWFWDTLVDADEANNPVSWQWVAGSGADAAPYFRVFNPERQRERFDPDD 439
Query: 426 VYIKKYVP 433
YI+ ++P
Sbjct: 440 AYIEDWLP 447
>UniRef50_Q1N8J8 Cluster: Deoxyribodipyrimidine photolyase; n=5;
Sphingomonadales|Rep: Deoxyribodipyrimidine photolyase -
Sphingomonas sp. SKA58
Length = 458
Score = 99.5 bits (237), Expect = 2e-19
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 243 SIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGV 302
S+E T+ LSP++ +G +S ++++ + L +L+WR++ +T +
Sbjct: 227 SVE-GTSRLSPHLHYGEVSPAYVWHRVTASNADAEIFLK------ELIWRDYTHTQICEM 279
Query: 303 ANFDKMVGNAICIQIPWT---KNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHM 359
+ ++ W + AW +G+TGYP VDA MRQL GW+H+ R +
Sbjct: 280 PAYGSKNARDDFDRMDWRDLREARGDFVAWKKGRTGYPIVDAGMRQLWTTGWMHNRVRMI 339
Query: 360 VACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYF-RVYSPVAFG 418
A FL + L I W GAK F D L+D D++ N+ NW W++ S F R+ +P+
Sbjct: 340 AASFLIK-HLLIDWRHGAKWFWDTLVDADYANNSVNWQWVAGSGIDANMFSRIMAPLTQS 398
Query: 419 QKTDKEGVYIKKYVPELKKYPRE 441
+K D G YI+++VPEL E
Sbjct: 399 EKFD-AGDYIRQWVPELAALSNE 420
>UniRef50_A4CAK2 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Pseudoalteromonas tunicata D2|Rep: Deoxyribodipyrimidine
photolyase - Pseudoalteromonas tunicata D2
Length = 437
Score = 99.5 bits (237), Expect = 2e-19
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 9/224 (4%)
Query: 182 PIDIQSENYSIPNLKELQIDEETLAPVK----YHGGETEALKRLNLYMSKKEWVCKFEKP 237
P +++ Y P L + + L P Y+GGE A L+ Y S K E
Sbjct: 165 PAPLEALTYLPPPLLSTEHKKHDLKPSAFNRYYNGGEITAHAYLHHYFSSKAPSIYKETR 224
Query: 238 NSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYT 297
N+ + +T LS +++HG LS + LK E+ + + +L+WRE++Y
Sbjct: 225 NALMG--DDFSTKLSGFLAHGALSPRQIMAALKRYESTQGANESTYWIYFELLWREYFYW 282
Query: 298 AGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLAR 357
G + + + K W EG T YP V+A+MR+L + GW+ + R
Sbjct: 283 YARKHQQRLFSAGGVRQKSLATSFYPSRFKQWCEGSTPYPLVNALMRELNETGWMSNRGR 342
Query: 358 HMVA-CFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS 400
+VA CF+ +L + W GA FE L+DYD N GNW +L+
Sbjct: 343 QIVASCFV--NELELDWRYGAAYFEQRLIDYDVGSNWGNWQYLA 384
>UniRef50_Q14N08 Cluster: Putative deoxyribodipyrimidine photolyase
protein; n=1; Spiroplasma citri|Rep: Putative
deoxyribodipyrimidine photolyase protein - Spiroplasma
citri
Length = 435
Score = 99.1 bits (236), Expect = 2e-19
Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 288 QLMWREFYYTAGTGVANFDKMVGNAIC---IQIPWTKNDAFLKAWAEGKTGYPFVDAIMR 344
QL WR+FYY + + I I WT N + + W G+TGY F+DA M+
Sbjct: 258 QLAWRDFYYQVTYNAQLHQQWCFSENWNKKITINWTNNLEWFQKWQNGETGYDFIDAGMK 317
Query: 345 QLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF 404
+LK+ G +H+ AR + A FL + +L I W +G + F L+DYD +N +W W++ + F
Sbjct: 318 ELKETGLLHNRARMVCASFLVK-NLQIDWHKGEQYFAQQLIDYDPIINQCSWQWVAGTGF 376
Query: 405 -FYKYFRVYSPVAFGQKTDKEGVYIKKYV 432
+FR+++P +K D Y K++
Sbjct: 377 DAQPFFRIFNPELQQKKYDPTSSYCNKFL 405
>UniRef50_Q0GKU4 Cluster: Cryptochrome 1 protein; n=1; Brassica
rapa|Rep: Cryptochrome 1 protein - Brassica campestris
(Field mustard)
Length = 704
Score = 99.1 bits (236), Expect = 2e-19
Identities = 63/204 (30%), Positives = 109/204 (53%), Gaps = 12/204 (5%)
Query: 247 STTVLSPYISHGCLSAKLFYY--KLKEV---ENGRQHTLPPVSL-MGQLMWREF--YYTA 298
+T+ LSP++ G +S + ++ ++K+V G Q V+L + + RE+ Y +
Sbjct: 268 TTSFLSPHLHFGEVSVRKVFHLLRIKQVAWANEGNQAGEESVNLFLKSIGLREYSRYISF 327
Query: 299 GTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARH 358
++ ++G+ PW ++ + KAW +G+TGYP VDA MR+L GW+H R
Sbjct: 328 NHPYSHERPLLGHLKFF--PWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRV 385
Query: 359 MVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYF-RVYSPVAF 417
+V+ F + L + W G K F D LLD D +A W +++ + + F R+ +P
Sbjct: 386 VVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFE 444
Query: 418 GQKTDKEGVYIKKYVPELKKYPRE 441
G K D G Y+++++PEL + P E
Sbjct: 445 GYKFDPNGEYVRRWLPELSRLPTE 468
>UniRef50_Q4P1U6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 623
Score = 98.7 bits (235), Expect = 3e-19
Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 28/255 (10%)
Query: 210 YHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPS--TTVLSPYISHGCLSAKLFYY 267
Y GGETEAL RL+ Y + + C + N + + +T ++ G LS +L
Sbjct: 287 YRGGETEALARLDHYFDRSD-SCPAASYKQTRNQMLGTDYSTKFGAALALGLLSPRLIAQ 345
Query: 268 KLKEVENGRQHTLPPVSLMG-------QLMWREFYYTAGT--GVANF-------DKMVGN 311
K E++N S G +L+WR+++Y G G F D +
Sbjct: 346 KATELDNATHDATHNASNKGGGYWIIFELLWRDYFYFVGWKFGSKLFSLRGIEDDISARS 405
Query: 312 AICIQIPWT-------KNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFL 364
A W ++D F++ W +TG P +DA M ++ Q G++ + R VA FL
Sbjct: 406 APSKASEWKSSASLSDRDDGFVR-WCTAQTGVPLIDANMVEMVQTGFMSNRGRQNVASFL 464
Query: 365 TRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKE 424
T+ DL +W GA+ FE +L+DY+ + N GNW +++ + R ++P+ G D
Sbjct: 465 TK-DLGWNWRHGAEFFESWLVDYEPNSNWGNWQYVAGVGNDPRSSRQFNPIKQGNDYDAN 523
Query: 425 GVYIKKYVPELKKYP 439
G Y+ ++P L P
Sbjct: 524 GEYVATWLPLLSDMP 538
>UniRef50_Q5LS53 Cluster: Deoxyribodipyrimidine photolyase; n=25;
Proteobacteria|Rep: Deoxyribodipyrimidine photolyase -
Silicibacter pomeroyi
Length = 481
Score = 98.3 bits (234), Expect = 4e-19
Identities = 106/444 (23%), Positives = 180/444 (40%), Gaps = 22/444 (4%)
Query: 1 MSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLL 60
MS+T +I+W R DLR+ D+ L A A R + P++ D ++ R L
Sbjct: 1 MSETRAIIYWLRRDLRLADHPGLAAAA--ASGRPVV--PVFIHDESVAALGAAPAFRLGL 56
Query: 61 QSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDI 120
LE + L + RG A +L L + + + P+ + +D ++
Sbjct: 57 -GLERFGATLGDMGSRLILRRGSAPAVLQALIAETGAGAVWWTREYTPQAITRDSALKTA 115
Query: 121 AEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEI-SNVLSSH 179
++ G+ +++ V G Y F V V P + V
Sbjct: 116 LQQAGIEARSFGGALLFEPWTV-ETGAGGFYKVYTPFWRAVSQREVSAPDPAPARVRPPE 174
Query: 180 CKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNS 239
P SE S L + GE AL+RL+ +++ + +++
Sbjct: 175 AWP---GSEALSDWGLGAPMRRGAAVVATHQAPGEAAALERLDRFIATG--IGQYDACRD 229
Query: 240 SPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVEN-GRQHTLPPVSLMGQLMWREFYYTA 298
P T+ LS +S G + + +++ E + G Q + + QL+WR+F Y
Sbjct: 230 LPAG--DGTSTLSDALSLGEIGPRTLWHRAGEAAHKGAQGA---ETFLKQLVWRDFAYHL 284
Query: 299 GTGVANFDKMVGNAICIQIPWTKN--DAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLA 356
+ PW + D AW G+TG P VDA MR++ G +H+ A
Sbjct: 285 MYHTPHLLSENWRPGWEVFPWATDPADPGFVAWTRGRTGVPLVDAAMREMYVTGRMHNRA 344
Query: 357 RHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS-ASAFFYKYFRVYSPV 415
R + A +LT+ L + W+ G F D L D+D + NA W W++ YFR+++P
Sbjct: 345 RMIAASYLTK-HLMVHWKLGMDWFADCLTDWDPAANAMGWQWVAGCGPDAAPYFRIFNPE 403
Query: 416 AFGQKTDKEGVYIKKYVPELKKYP 439
+K D +G Y ++ E + P
Sbjct: 404 TQAKKFDPKGRYRNHWIAEGQAEP 427
>UniRef50_Q087D0 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;
Alteromonadales|Rep: Deoxyribodipyrimidine photo-lyase -
Shewanella frigidimarina (strain NCIMB 400)
Length = 504
Score = 98.3 bits (234), Expect = 4e-19
Identities = 107/446 (23%), Positives = 194/446 (43%), Gaps = 40/446 (8%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRL--RFLLQSLEX 65
I WF+ DLR+ D+ L +A N + LL IY +P + N RF+ QSL+
Sbjct: 11 IVWFKRDLRLSDHQPLVDAFNH--DLPCLL--IYTFEPFMLADSHYNERHWRFVWQSLQD 66
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVK--YLTCQVDIDPEFVQQDEYIEDIAEK 123
+Y+ +DLL ++ +++K Y ++ + F ++D+ + +
Sbjct: 67 MNQQLLRFNGQVYMFSMPMIDLLDEISQTFEIKNIYSHQEIGLHNSF-ERDKTVARWCNQ 125
Query: 124 KGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPI 183
+ V + V R+N A +Q+ ++ PI I N + +
Sbjct: 126 QPVSWQQSPTGAVVRG----RKNRQAWDQHWQQVMN--------SPIAIPNWQQCQLQKL 173
Query: 184 DIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNS 243
D NY P L + + GG A L+ +++ + +++ SSP+
Sbjct: 174 D----NYQEPTLDNAIMAHNDQFQI---GGPKAARTILSSFLTHRGK--DYQRSISSPSL 224
Query: 244 IEPSTTVLSPYISHGCLSAKLFYY----KLKEVENGRQHTLPPV-SLMGQLMWREFYYTA 298
+ LSPY++ G +S K Y + EV+ + P+ ++M +L W +
Sbjct: 225 SRTHCSRLSPYLAWGNISLKQVYQATLTRYNEVQTSNKAWRKPLLAMMSRLHWHCHFMQK 284
Query: 299 GTGVANFDKMVGNAICIQIPWTKNDAF---LKAWAEGKTGYPFVDAIMRQLKQEGWIHHL 355
+ + N + P+ +D ++ WA+G+TG P +DA MR LK+ G+I+
Sbjct: 285 FESQCSMEFTPVNPGYVDYPYRTDDKVQQDIQRWADGQTGIPIIDACMRCLKETGYINFR 344
Query: 356 ARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPV 415
R M+ F+T L I+W+ + +Y LD++ ++ + + AS R+Y+PV
Sbjct: 345 MRAMLVSFVTH-HLNIAWQHASLPLANYFLDFEPGIHYPQ-LQMQASVTGINTIRLYNPV 402
Query: 416 AFGQKTDKEGVYIKKYVPELKKYPRE 441
Q D G +I+ + PEL P E
Sbjct: 403 KQSQDQDPRGEFIRLWCPELTNLPNE 428
>UniRef50_Q6NKC0 Cluster: Putative riboflavin biosynthesis protein;
n=1; Corynebacterium diphtheriae|Rep: Putative
riboflavin biosynthesis protein - Corynebacterium
diphtheriae
Length = 446
Score = 97.5 bits (232), Expect = 6e-19
Identities = 113/442 (25%), Positives = 177/442 (40%), Gaps = 26/442 (5%)
Query: 6 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEX 65
+V+ WFR DLR+HDN AL A L +Y + +G +L SL
Sbjct: 4 SVVVWFRDDLRVHDNPALMKAWELVRANPADLHAVYIANEVGVRPLGGAVKWWLHHSLLA 63
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 125
L+VL G + LLP+L +T DP D+ A
Sbjct: 64 LSEQLAQRGVRLHVLSGDPLTLLPQLVTSCGATAVTMNRRYDPAARSIDDAFVADASAHD 123
Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDI 185
V + H + + ++ G+ + + F ++ P++ +PID
Sbjct: 124 VEVYDFPCHLLAEPGEITTTTGGSYKV-FTPFSRNLRDAIGDLPLDTLAAPPKAEQPIDD 182
Query: 186 QSENYSIPNLKELQIDEETLAPVKYHG--GETEALKRLNLYMSKKEWVCKFEKPNSSPNS 243
+I +L +++ G EAL L+ + + ++ ++P+
Sbjct: 183 TETQAAIADLGWDAWWAASISKAWTPGEPAAREALAELDDILPR--YLDDRDRPDID--- 237
Query: 244 IEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVA 303
T+ LSP + G LS + EV N H QLMWR+F +
Sbjct: 238 ---GTSRLSPRLRFGELS-------VAEVWN---HAHTSEGFRRQLMWRDFAWHRLDAHP 284
Query: 304 NFDKMVGNAICIQIPWTKND--AFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVA 361
+ PW D A L AW G+TG VDA MR+L G +H+ R MVA
Sbjct: 285 DMATANIRPEFDHFPWDGGDFEAELNAWRHGRTGIALVDAGMRELWATGTMHNRVR-MVA 343
Query: 362 CFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASA-FFYKYFRVYSPVAFGQK 420
L +L I W G + F D L+D D + N NW W++ S YFR+++P ++
Sbjct: 344 ASLLVKNLGIHWRHGEQWFWDTLVDADPASNPFNWQWVAGSGDDAAPYFRIFNPDTQARR 403
Query: 421 TDKEGVYIKKYVPELK-KYPRE 441
D +G Y +++P + YP E
Sbjct: 404 FDPDGTYRTRWLPIMSADYPEE 425
>UniRef50_A7S6B1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 159
Score = 97.5 bits (232), Expect = 6e-19
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 4/156 (2%)
Query: 6 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEX 65
T HWFR DLR+HDN AL++A++ A+ ++ L NR +FLLQ L+
Sbjct: 7 TSCHWFRKDLRLHDNPALKDALDNAD----CFYGVFVLSNFHPSITSGNRWKFLLQCLQD 62
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 125
+ L +L G V++ PKL +V LT +VD +P Q+D I IA G
Sbjct: 63 LNNSLEELGSKLIILTGSPVEIFPKLLHSLKVTKLTFEVDTEPFAQQRDSVISHIARSAG 122
Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLV 161
+ + HT+YD+ ++ N +PL + +FL ++
Sbjct: 123 IEVKTHASHTLYDIESLVSHCNENIPLVFDEFLEMI 158
>UniRef50_Q1VSH5 Cluster: Putative deoxyribodipyrimidine photolyase;
n=1; Psychroflexus torquis ATCC 700755|Rep: Putative
deoxyribodipyrimidine photolyase - Psychroflexus torquis
ATCC 700755
Length = 485
Score = 97.1 bits (231), Expect = 8e-19
Identities = 104/438 (23%), Positives = 188/438 (42%), Gaps = 32/438 (7%)
Query: 10 WFRLDLRIHDNLALRNAINEAEN--RKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXXX 67
WF+ DLR+ D+ L A+ + + ++ PI D + ++ RF+ +SL
Sbjct: 6 WFKRDLRLQDHAPLHLALQKKQPVLLLYIFEPILLKDSHYSER----HFRFIKESLRDIQ 61
Query: 68 XXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVF 127
T + ++ G A D+ K + Q+ I F Q+ ++ I K+
Sbjct: 62 KQLEAYHTQVLIVEGNAEDVF---------KTIHQQLTIKSVFSHQETGLQ-ITFKRDK- 110
Query: 128 INKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKS-INVKEPIEISNVLSSHCKPIDIQ 186
N ++ + NNG + + L K+ IN+ E ++L +
Sbjct: 111 -NLKLLFKSLSIQWKEFVNNGVI-----RGLQNRKTWINLWENFMSQDLLYFSASLGQFE 164
Query: 187 SENYSIPNLK-ELQ-IDEETLAPVKYH-GGETEALKRLNLYMSKKEWVCKFEKPNSSPNS 243
++N I +LK +L +D T + + GG AL+ L ++ + ++K S P
Sbjct: 165 NQN-QIDSLKGQLSPVDLSTERNLNFQKGGRPTALRYLKGFLQDR--YPNYQKNISKPLL 221
Query: 244 IEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVA 303
S + LSPYI+ G LS + E+++ +H +L W+ +
Sbjct: 222 ARKSCSRLSPYIAWGVLSMREVIQASIEIQDKTKHKQALSQFQSRLRWQAHFIQKFEMEY 281
Query: 304 NFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACF 363
+ + N+ + N A +AW +G+TG+P VDA M+ L Q G+++ R ++ F
Sbjct: 282 HAEFQNFNSAFNVLEKPYNKALAEAWKKGETGFPLVDASMKCLIQTGYLNFRMRALLVSF 341
Query: 364 LTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDK 423
T LW +W+E + LD++ ++ + + A R+Y+PV K D
Sbjct: 342 FTH-LLWQTWQEASSHLASLFLDFEPGIHYPQ-LQMQAGTTGIHTLRIYNPVKNSYKHDL 399
Query: 424 EGVYIKKYVPELKKYPRE 441
+G +I Y+P LK P E
Sbjct: 400 DGEFILTYLPSLKGIPLE 417
>UniRef50_Q43125 Cluster: Cryptochrome-1; n=55; Streptophyta|Rep:
Cryptochrome-1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 681
Score = 96.7 bits (230), Expect = 1e-18
Identities = 61/204 (29%), Positives = 109/204 (53%), Gaps = 12/204 (5%)
Query: 247 STTVLSPYISHGCLSAKLFYY--KLKEV---ENGRQHTLPPVSL-MGQLMWREF--YYTA 298
+T+ LSP++ G +S + ++ ++K+V G + V+L + + RE+ Y +
Sbjct: 246 TTSFLSPHLHFGEVSVRKVFHLVRIKQVAWANEGNEAGEESVNLFLKSIGLREYSRYISF 305
Query: 299 GTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARH 358
++ ++G+ PW ++ + KAW +G+TGYP VDA MR+L GW+H R
Sbjct: 306 NHPYSHERPLLGHLKFF--PWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRV 363
Query: 359 MVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYF-RVYSPVAF 417
+V+ F + L + W G K F D LLD D +A W +++ + + F R+ +P
Sbjct: 364 VVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFE 422
Query: 418 GQKTDKEGVYIKKYVPELKKYPRE 441
G K D G Y+++++PEL + P +
Sbjct: 423 GYKFDPNGEYVRRWLPELSRLPTD 446
>UniRef50_Q9KR33 Cluster: Cryptochrome DASH; n=22;
Gammaproteobacteria|Rep: Cryptochrome DASH - Vibrio
cholerae
Length = 461
Score = 95.9 bits (228), Expect = 2e-18
Identities = 107/430 (24%), Positives = 185/430 (43%), Gaps = 25/430 (5%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI-----KDKVGINRLRFLLQS 62
++WF DLR++DN L A + + R L + P + + + G + RFL Q+
Sbjct: 7 LYWFTNDLRVNDNPLLEQASQQVD-RLICLYCYPSITPFLARYAQQTQWGEAKKRFLNQT 65
Query: 63 LEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAE 122
L L+V L L QV+ VD ++ +
Sbjct: 66 LADLDHSLSTLGQKLWVTPLLPYQALRHLLT--QVEITDIYVDAVAGSDERQAIARIHQD 123
Query: 123 KKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKP 182
V I+++ H++ + L A+P T+ +F V++I++ P+ +VL P
Sbjct: 124 FSSVHIHQQALHSLLSEPQ-LPFALEALPSTFTQFRKQVETISLSAPMGYPHVLP----P 178
Query: 183 IDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPN 242
I+ + + +P L ++ + A V GGE L Y S ++++ + +
Sbjct: 179 IE---QGWQLP-LMDIVTEPNHSAFV---GGEQAGLTHCQNYFSSL-LPSRYKETRNGLD 230
Query: 243 SIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWRE-FYYTAGTG 301
++ ST SP+++ G +S K Y L+ E + +L+WRE FY+ A
Sbjct: 231 GMDYSTK-FSPWLALGAVSPKTIYAMLQRYEAVHGANDSTYWIFFELLWREYFYWYARRY 289
Query: 302 VANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVA 361
A + G + FL+ W G+T +P V+A MRQL Q G++ + R +VA
Sbjct: 290 GAKLFRFSGIGEKKPLTSFYAQRFLQ-WKHGETPFPIVNACMRQLNQTGYMSNRGRQLVA 348
Query: 362 CFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKT 421
L +L + W GA FE L+DYD N GNW +L+ + R ++
Sbjct: 349 SCLVH-ELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRGSRQFNLEKQAHTY 407
Query: 422 DKEGVYIKKY 431
D +G ++ K+
Sbjct: 408 DPKGEFVAKW 417
>UniRef50_Q30Q43 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep:
Deoxyribodipyrimidine photolyase - Thiomicrospira
denitrificans (strain ATCC 33889 / DSM 1351)
Length = 445
Score = 95.5 bits (227), Expect = 2e-18
Identities = 45/109 (41%), Positives = 69/109 (63%), Gaps = 2/109 (1%)
Query: 328 AWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDY 387
A+ KTG P VDA +R+L + G++H+ R +VA F T+ DL + W+ G + F ++LLDY
Sbjct: 295 AFCSAKTGVPIVDAGVRELLKTGYMHNRVRMVVASFFTK-DLLLPWQWGERFFAEHLLDY 353
Query: 388 DWSLNAGNWMWLSASAFF-YKYFRVYSPVAFGQKTDKEGVYIKKYVPEL 435
D + N +W W + + YFR+++P +K DKE +YIK+YV EL
Sbjct: 354 DKASNVLSWQWSAGTGVDPQPYFRIFNPYLQSKKFDKEALYIKRYVSEL 402
>UniRef50_Q1GUF7 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Sphingopyxis alaskensis|Rep: Deoxyribodipyrimidine
photolyase - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 457
Score = 95.5 bits (227), Expect = 2e-18
Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 11/195 (5%)
Query: 245 EPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVAN 304
+P+T+ LSP++ G +S + ++ + E ++ S +L WRE + +
Sbjct: 226 QPATSRLSPHLHFGEISPRALWHAIGERDDAGAE-----SYRSELGWREHGINLVDQMPD 280
Query: 305 FDKMVGNAICIQIPWTKN---DAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVA 361
+ G + + W D AW G+TGYP VDA MR+L Q GW+H+ R + A
Sbjct: 281 YADRNGRELFDRFAWRTGADADRDFAAWTRGRTGYPVVDAGMRELWQTGWMHNRVRMVTA 340
Query: 362 CFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYF-RVYSPVAFGQK 420
FL + L I W G + F D LLD D NA NW +++ + F R+ SP+ ++
Sbjct: 341 SFLVK-HLLIDWRRGERWFWDTLLDADLGSNAMNWQYVAGTGVDAPVFSRIMSPLLQCER 399
Query: 421 TDKEGVYIKKYVPEL 435
Y++ +VPEL
Sbjct: 400 FAMAD-YVRAHVPEL 413
>UniRef50_P05066 Cluster: Deoxyribodipyrimidine photo-lyase,
mitochondrial precursor; n=2; Saccharomyces
cerevisiae|Rep: Deoxyribodipyrimidine photo-lyase,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 565
Score = 95.5 bits (227), Expect = 2e-18
Identities = 81/293 (27%), Positives = 139/293 (47%), Gaps = 28/293 (9%)
Query: 154 YQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQSENYSIPN--LKELQIDEETLAPVKYH 211
Y+K S + +++ EP++ + KP YS+P+ L+ + + L V
Sbjct: 257 YKKSTSEICHLHIIEPLKYNETFE--LKPFQ-----YSLPDEFLQYIPKSKWCLPDVS-- 307
Query: 212 GGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIE-PSTTVLSPYISHGCLSAKLFYYKLK 270
E AL RL ++ K K N+ + + T+ LS YI+ G +S +L +
Sbjct: 308 --EEAALSRLKDFLGTKS-----SKYNNEKDMLYLGGTSGLSVYITTGRISTRLIVNQAF 360
Query: 271 EVENGR------QHTLPPVSLMGQLMWREFY-YTAGTGVANFDKMVGNAICIQIPWTKND 323
+ NG+ + + + ++ WR+FY + M + I W N
Sbjct: 361 QSCNGQIMSKALKDNSSTQNFIKEVAWRDFYRHCMCNWPYTSMGMPYRLDTLDIKWENNP 420
Query: 324 AFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDY 383
+ W G TG P VDAIMR+L G+I++ +R + A FL++ +L I W G + F +
Sbjct: 421 VAFEKWCTGNTGIPIVDAIMRKLLYTGYINNRSRMITASFLSK-NLLIDWRWGERWFMKH 479
Query: 384 LLDYDWSLNAGNWMWLSASAF-FYKYFRVYSPVAFGQKTDKEGVYIKKYVPEL 435
L+D D S N G W + S++ YFRV++ +K D + +++K++VPEL
Sbjct: 480 LIDGDSSSNVGGWGFCSSTGIDAQPYFRVFNMDIQAKKYDPQMIFVKQWVPEL 532
Score = 34.3 bits (75), Expect = 6.5
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 6 TVIHWFRLDLRIHDNLALRNAI 27
TV+HWFR DLR++DN+ L ++
Sbjct: 76 TVMHWFRNDLRLYDNVGLYKSV 97
>UniRef50_Q47SJ5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Thermobifida fusca YX|Rep: Deoxyribodipyrimidine
photolyase - Thermobifida fusca (strain YX)
Length = 419
Score = 95.1 bits (226), Expect = 3e-18
Identities = 100/431 (23%), Positives = 180/431 (41%), Gaps = 37/431 (8%)
Query: 6 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEX 65
T + F DLR+ D+ AL A+ EA+ + P++ +DP + NR+ +LL++L
Sbjct: 3 TTVVLFTRDLRVSDHPALHAAVTEADR----VVPLFVVDPALVRVSARNRIAYLLEALAE 58
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 125
L V +G V ++ + + + D+ V++ + + G
Sbjct: 59 LRGLLRERGGELVVRQGDTVAETVRIVAEAGAQAVYLSADVSAAAVRRARQLTEAVRAAG 118
Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDI 185
+ TV LR +G + +L+ ++ + P + P +
Sbjct: 119 AHVRTFPGVTVVPPG-ALRPAHGDHYQIFTPYLNAWRAAQWRSPRPAPERVRL---PEGL 174
Query: 186 QSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIE 245
+P + +++ LAP + GG A +R+ ++++ PN
Sbjct: 175 VPG--PLPGAELIRLGTGVLAPQREQGGPRTARERIRAWLAQ---------PNQDSR--- 220
Query: 246 PSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANF 305
++ GCLS L+ R+H + L+ QL R+F++
Sbjct: 221 -----FGCHLHFGCLSP------LEVALVAREHPRGAL-LLRQLALRDFHHQVLQAFPRL 268
Query: 306 DKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLT 365
+ IQ W +D+ AW G+TG P VDA MRQL EG++ R + A +LT
Sbjct: 269 PRADYRPRPIQ--WRDDDSAFAAWCSGRTGVPIVDAGMRQLLWEGYVPGRIRMLTATYLT 326
Query: 366 RGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEG 425
+ L I W+ GA F L+D D + N GNW ++ + + R + ++ D G
Sbjct: 327 Q-VLRIHWKRGADHFYSLLVDGDVANNYGNWQQIAGTGGVPRPARRINLYRQAERYDPSG 385
Query: 426 VYIKKYVPELK 436
Y++++VPEL+
Sbjct: 386 DYVRRFVPELR 396
>UniRef50_A0Z3E3 Cluster: Deoxyribodipyrimidine photolyase,
putative; n=3; Gammaproteobacteria|Rep:
Deoxyribodipyrimidine photolyase, putative - marine
gamma proteobacterium HTCC2080
Length = 490
Score = 94.7 bits (225), Expect = 4e-18
Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 4/228 (1%)
Query: 212 GGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKE 271
GGE +A + L +++ + +++ S P + LSP+++ G LS + LKE
Sbjct: 194 GGEQQAHQTLEDFLTHRAG--GYQRHISKPEGSRQHCSRLSPHLAWGNLSIRQVQQALKE 251
Query: 272 VENGRQHTLPPVSLMGQLMWREFYYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAE 331
++ P + +L W + + N + P +N + AW E
Sbjct: 252 RQSKGGWARPLSAFESRLHWHCHFIQKFESECTMEFESINRGFLNYPRDQNSHLVAAWCE 311
Query: 332 GKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSL 391
G+TG+P+VDA MR L+ G++H AR M+ FLT LW W G LD++ +
Sbjct: 312 GQTGFPYVDACMRCLEATGYLHFRARAMLVSFLTH-HLWQDWRLGVTWLGSLFLDFEPGI 370
Query: 392 NAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYP 439
+ M + A R+Y+PV + D +I+++VPE+ P
Sbjct: 371 HYPQ-MQMQAGVTGINTIRIYNPVKQSLEHDPTASFIRRWVPEIADLP 417
>UniRef50_A1U5B0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Marinobacter aquaeolei VT8|Rep: Deoxyribodipyrimidine
photo-lyase - Marinobacter aquaeolei (strain ATCC 700491
/ DSM 11845 / VT8)(Marinobacter hydrocarbonoclasticus
(strain DSM 11845))
Length = 505
Score = 94.3 bits (224), Expect = 6e-18
Identities = 100/444 (22%), Positives = 189/444 (42%), Gaps = 36/444 (8%)
Query: 7 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLR--FLLQSLE 64
V+ WF+ DLR+ D+ L A+ + + P+Y ++P + +R + F+ +SLE
Sbjct: 3 VVVWFKRDLRVEDHGPLYAAVQSGQP----VVPLYVVEPEYWQQPDTSRRQWQFVAESLE 58
Query: 65 XXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFV-QQDEYIEDIAEK 123
+ L + G+ + L L + + + C + ++ Q+D+ + IA
Sbjct: 59 SLRKQLKRLGSDLLIAHGEVIRTLDDLKQQYGITQVFCHQETGGDWTFQRDKAV--IAWC 116
Query: 124 KGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPI 183
+ I R V +++ ++ Q + ++KS + P I +
Sbjct: 117 QSQQIEFREWQGFGVVRRLVNRDDWD-----QHWNRIIKSTRLPAPEGIRSP-------- 163
Query: 184 DIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNS 243
D S+P +L P + GG A+ L+ ++ ++ ++ SSP +
Sbjct: 164 DTSGWPQSLPAPAQLNGGP---CPDRQAGGSERAIALLDSFLERR--CVGYQYNMSSPLT 218
Query: 244 IEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPP-----VSLMGQLMWREFYYTA 298
+ + LSP+++ G +S + Y + KE + R +TLP S +L W +
Sbjct: 219 APRACSRLSPHLAWGTISLRDVYQQSKETGDHR-NTLPRKKKSLTSFRSRLHWHCHFIQK 277
Query: 299 GTGVANFDKMVGNAICIQIPWTKNDAF-LKAWAEGKTGYPFVDAIMRQLKQEGWIHHLAR 357
+ + + N++ L W EG+TG+P VDA MR L+ GWI+ R
Sbjct: 278 LEDEPELEFRAMHRELEHLKTGPNNSERLHRWQEGQTGWPLVDACMRSLEHTGWINFRMR 337
Query: 358 HMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAF 417
M+ + LW+ W + A D++ ++ + + R+Y+PV
Sbjct: 338 AMLMA-VASYQLWLHWRDPALHLARLFTDFEPGIHYPQ-AQMQSGLTGINALRIYNPVLQ 395
Query: 418 GQKTDKEGVYIKKYVPELKKYPRE 441
QK D EG +I++++PEL P E
Sbjct: 396 SQKLDPEGEFIRRWIPELAGVPAE 419
>UniRef50_A6DFN1 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Lentisphaera araneosa HTCC2155
Length = 481
Score = 93.9 bits (223), Expect = 8e-18
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 2/198 (1%)
Query: 239 SSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTA 298
S P+ S LSPY++ G +S++ Y +K + + L+ +L WR +
Sbjct: 217 SKPSESRKSCGRLSPYLAWGNVSSRQVYQLVKASPKYKDNKRAYSGLLTRLKWRSHFIQK 276
Query: 299 GTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARH 358
+++ + N + N F++AW +GKTGYP VDA MR L GWI+ R
Sbjct: 277 FEVECSYEYLCLNKGYELMSLDFNAEFIEAWKDGKTGYPLVDACMRCLHATGWINFRMRA 336
Query: 359 MVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFG 418
M+ F L W +G LDY+ ++ + + A R+Y+P+
Sbjct: 337 MLTSFFCH-HLAQDWRDGVYHLAKLFLDYEPGIHFPQFQ-MQAGTTGINTVRIYNPIKQS 394
Query: 419 QKTDKEGVYIKKYVPELK 436
D EG +I++++PELK
Sbjct: 395 MDNDPEGEFIRQWIPELK 412
>UniRef50_Q0V6S3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 642
Score = 93.5 bits (222), Expect = 1e-17
Identities = 112/452 (24%), Positives = 195/452 (43%), Gaps = 38/452 (8%)
Query: 7 VIHWFR-LDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGIN--RLRFLLQSL 63
V HWF DLRI DN AL +A A+++K L +Y + G + R+ F+ + L
Sbjct: 156 VAHWFHPKDLRIQDNTALHHASELAQSKKKPLVGVYVNCAADESWHGTSPARVDFMCEGL 215
Query: 64 EXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEK 123
+ L L + + +W V + E+ + DE DI
Sbjct: 216 KIMQKELKDLNIPLVFLECEDRKKIVPTVIEWLKGQKVSHVFGNYEY-EIDELRRDIKLV 274
Query: 124 K----GVFINKRVQHTVYDVHKVLRENNGAVPLT---YQKFLSLVKS---INVKEPIEIS 173
K G+ ++ TV + +L + + ++++L+++K + P +
Sbjct: 275 KQVGGGIQVSLHHDQTVIEPGTMLTGAGKPMKVFTPYHKQWLAILKEQPELLDTSPAPAA 334
Query: 174 NVLSSHCKPIDIQSENYSIPNL-KELQIDEETLAPVK-YHGGETEALKRLNLYMSKKEWV 231
N S + D+ P K+ DEE K + G A KR++ ++ +
Sbjct: 335 NPSSMKKELKDLFDTPAPKPAADKQFSSDEEKKRIRKLWPAGHAAASKRMDAFLKT---I 391
Query: 232 CKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENG-----RQHTLPPV-SL 285
+ S+P + ST+ LS Y S G S + K+ + +G P V
Sbjct: 392 DSYAATRSNP--AKDSTSRLSAYFSAGMFSVRSALQKVADYNHGSTDFTESSARPGVYGW 449
Query: 286 MGQLMWREFY-YTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMR 344
+ ++++RE Y T T M N + W ++ + W +G+TG PF+DA MR
Sbjct: 450 VREIVFRELYRQTTLTTPHTSMNMPQNLKFDFVQWEDDEEGWEKWYKGETGEPFIDAGMR 509
Query: 345 QLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF 404
QL E ++H+ R V+ +L +L + + G + F + L+D+D S N W
Sbjct: 510 QLNHEAYMHNRLRMNVSSYL-YCNLLLDYRRGERYFAETLIDWDLSNNTQGW-------- 560
Query: 405 FYKYFRVYSPVAFGQKTDKEGVYIKKYVPELK 436
+ V++PV+ ++ D +G YI+K+VPELK
Sbjct: 561 -EPSYTVFNPVSQAERNDPDGDYIRKWVPELK 591
>UniRef50_A3X5Z0 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Alphaproteobacteria|Rep: Deoxyribodipyrimidine
photolyase - Roseobacter sp. MED193
Length = 502
Score = 90.6 bits (215), Expect = 7e-17
Identities = 102/447 (22%), Positives = 196/447 (43%), Gaps = 53/447 (11%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLR--FLLQSLEXXX 67
WF+ DLR D+ AL A + P+Y ++P++ + + + F+ ++L
Sbjct: 5 WFKRDLRCSDHAALTRAAQVGP-----VLPLYVVEPDLWQQPDASHRQWCFVAETLAELR 59
Query: 68 XXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFV-QQDEYIEDIAEKKGV 126
L V +G V++L L ++ L + + Q+D + G+
Sbjct: 60 DDLKLRGQPLVVRQGSVVEILEGLMRQGRLSALWSHEESGNGWTFQRDCRVAAWCRDNGI 119
Query: 127 FINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQ 186
++ H V+ + L+ +G + + ++ +P + L+ P+DI
Sbjct: 120 PWHELQNHGVW---RRLQSRDGWAK-RWDRLMA--------QPCASAPQLA----PVDIV 163
Query: 187 SENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEP 246
SIP ++L + + ++P + GG L+RL +++++ +++ SSP
Sbjct: 164 PG--SIPTARDLGLGSD-VSPGRQSGGRGAGLERLESFLNQRGE--HYQRAMSSPLEGTS 218
Query: 247 STTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPV---------SLMGQLMWREFYYT 297
+ + LSPY++ G +S + ++ + RQ L P S G+L W +
Sbjct: 219 ACSRLSPYLAWGAVSMR----EVAQANAARQRALLPAEKSWRKSLRSFSGRLHWHCHFIQ 274
Query: 298 AGTGVANFDKMVGNAICIQI-PWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLA 356
+ + + + P T + A L+AW +G+TGYPF+DA MR L+ GW++
Sbjct: 275 KIEDEPRIEFENLHRLMDDLRPKTPDAARLQAWEKGETGYPFLDACMRCLRSTGWLNFRM 334
Query: 357 RHMVACFLTRGDLWISW----EEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVY 412
R M+ + LW+ W + A++F DY WS + + + R+Y
Sbjct: 335 RAMLMA-VAAYHLWLDWRAPGQHLARMFTDYEPGIHWS-----QVQMQSGTTGINTVRIY 388
Query: 413 SPVAFGQKTDKEGVYIKKYVPELKKYP 439
+PV G D G++I+ ++PEL + P
Sbjct: 389 NPVKQGFDQDPTGIFIRIWLPELAQIP 415
>UniRef50_Q8FRW1 Cluster: Deoxyribodipyrimidine photolyase; n=5;
Corynebacterium|Rep: Deoxyribodipyrimidine photolyase -
Corynebacterium efficiens
Length = 492
Score = 90.2 bits (214), Expect = 9e-17
Identities = 48/119 (40%), Positives = 71/119 (59%), Gaps = 5/119 (4%)
Query: 320 TKNDAF---LKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEG 376
T +D F L AW G+TG P VDA MR+L G +H+ +R +VA FLT+ +L I W G
Sbjct: 347 TSSDEFHVALAAWRAGRTGIPLVDAGMRELWATGSMHNRSRMVVASFLTK-NLQIHWRHG 405
Query: 377 AKIFEDYLLDYDWSLNAGNWMWLSASA-FFYKYFRVYSPVAFGQKTDKEGVYIKKYVPE 434
+ F + L+D D + NA NW W + S YFR+++P +K D + YI++++PE
Sbjct: 406 EEWFWETLVDADPASNAFNWQWAAGSGDDASPYFRIFNPETQARKFDPDETYIRRWIPE 464
>UniRef50_A6EZB3 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=1; Marinobacter algicola DG893|Rep:
Deoxyribodipyrimidine photolyase family protein -
Marinobacter algicola DG893
Length = 507
Score = 89.4 bits (212), Expect = 2e-16
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 11/236 (4%)
Query: 212 GGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKE 271
GG T+ K L+ ++ ++ ++ SSP S + + LSP+I++G +S + Y + K
Sbjct: 189 GGSTKGHKLLDSFLERR--CIGYQYNMSSPLSAVKACSRLSPHIAYGSVSLREIYQQAKI 246
Query: 272 VENGRQHTLPP-----VSLMGQLMWREFYYTAGTGVANFDKMVGNAICIQIPWTKNDAF- 325
N R +TLP S +L W + + + + ND+
Sbjct: 247 TGNHR-NTLPRKQKSLTSFRSRLHWHCHFIQKLEDEPELEFRAMHRELEHLKSGPNDSER 305
Query: 326 LKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLL 385
L+ W EG+TG+P VDA MR L+ GWI+ R M+ + LW+ W + A
Sbjct: 306 LQRWQEGQTGWPLVDACMRALQHTGWINFRMRAMLMA-VASYQLWLHWRDPALHLARQFT 364
Query: 386 DYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPRE 441
D++ ++ + + R+Y+PV QK D +G +I++++PEL P E
Sbjct: 365 DFEPGIHYPQ-AQMQSGLTGINALRIYNPVLQSQKLDPQGEFIRRWIPELAGVPAE 419
>UniRef50_Q1MZA5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Oceanobacter sp. RED65|Rep: Deoxyribodipyrimidine
photolyase - Oceanobacter sp. RED65
Length = 440
Score = 89.0 bits (211), Expect = 2e-16
Identities = 66/238 (27%), Positives = 119/238 (50%), Gaps = 11/238 (4%)
Query: 198 LQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISH 257
+ +D+ + + GGE + L+ L Y + + +++ ++ + E S+ S +++
Sbjct: 188 INLDDNRSSALCITGGEQKGLEHLYDYFNGS-YALQYKATRNALDGWENSSK-FSYWLAQ 245
Query: 258 GCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFY--YTAGTGVANFDKMVGNAICI 315
G LS +L +L++ E+ + L +L+WREF+ Y+ G F + I
Sbjct: 246 GSLSVRLILQELRQFESLHSNNESTEHLYMELLWREFFQWYSHFYGKQLF---YFSGIQK 302
Query: 316 QIPWTK--NDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISW 373
+ P T AF + W EG T +P V+A M QL+ G++ + R +VA L +L + W
Sbjct: 303 KRPLTTFYPQAF-RMWLEGHTEWPLVNACMNQLRTTGYMSNRGRQIVASCLLN-ELKVDW 360
Query: 374 EEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKY 431
GA+ FE YLLDYD + N GNW +++ + R ++ Q D + ++I K+
Sbjct: 361 RAGAQAFEHYLLDYDVAANWGNWQYIAGVGADPRGGRHFNIEKQTQLYDPDNLFIDKW 418
>UniRef50_Q0I8L2 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=4; Bacteria|Rep: Deoxyribodipyrimidine
photolyase family protein - Synechococcus sp. (strain
CC9311)
Length = 504
Score = 89.0 bits (211), Expect = 2e-16
Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 10/229 (4%)
Query: 207 PVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFY 266
P + GG + AL L+ ++ + + + SSPN+ + LS Y++ GCLS +
Sbjct: 185 PHRQSGGRSMALLELDDFLEHR--APGYARSISSPNTAFTGCSRLSAYLTWGCLSMREVI 242
Query: 267 YKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANFDKMVGNAICIQIPWTKNDAFL 326
+ +GR + S +L W + + + + + T ND L
Sbjct: 243 QTSRGF-SGRGIS----SFESRLHWHCHFIQKLEAQPSIEFEDFHPFMRGLRCT-NDQRL 296
Query: 327 KAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLD 386
AWAEG+TG PFVDA MR L+ GWI+ R M+ F + LW+ W + +D
Sbjct: 297 LAWAEGRTGVPFVDACMRALRAHGWINFRMRAMLMSFASY-HLWLPWRDSGLHLARQFVD 355
Query: 387 YDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPEL 435
Y+ ++ S S RVY+P+ GQ D G +I+ +VPEL
Sbjct: 356 YEPGIHWSQCQMQSGSTAI-NTVRVYNPIKQGQDHDLNGEFIRTWVPEL 403
>UniRef50_Q4T4M6 Cluster: Chromosome undetermined SCAF9582, whole
genome shotgun sequence; n=3; Clupeocephala|Rep:
Chromosome undetermined SCAF9582, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 755
Score = 88.6 bits (210), Expect = 3e-16
Identities = 70/242 (28%), Positives = 113/242 (46%), Gaps = 29/242 (11%)
Query: 214 ETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVE 273
E A RL ++ + V +++K + ++ P+T+ +SPY+ G LS + + K
Sbjct: 332 EEGAHARLEAFLG--DGVYRYDKESGRADA--PNTSCVSPYLHFGQLSPRWVLWDAKAAR 387
Query: 274 NGRQHTLPPVSLMGQLMWREFYYTAGTGVANFDKMVGNAI---CIQIPWTKNDAFLKAWA 330
P +L WR+ Y ++ F ++ ++ + W+ + LKAW
Sbjct: 388 ------CRPPKFQRKLAWRDLAYWQ---LSLFPELPWESLRPPYKALRWSSDRRHLKAWQ 438
Query: 331 EGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIF---------- 380
G TGYP VDA MRQL GW+++ RH+VA FL L + W+EG + F
Sbjct: 439 RGGTGYPLVDAAMRQLWLTGWMNNYMRHVVASFLI-AYLHLPWQEGYRWFQVRNGCRGDT 497
Query: 381 -EDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYP 439
+D L+D D +++A W + F V PV D +G Y++K+ PEL P
Sbjct: 498 GQDTLVDADVAIDAMMWQNGGMCGLDHWNF-VMHPVDAAMTCDPDGSYVRKWCPELSGLP 556
Query: 440 RE 441
E
Sbjct: 557 DE 558
>UniRef50_A6CY79 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Vibrio|Rep: Deoxyribodipyrimidine photolyase - Vibrio
shilonii AK1
Length = 472
Score = 88.6 bits (210), Expect = 3e-16
Identities = 104/439 (23%), Positives = 187/439 (42%), Gaps = 35/439 (7%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHL-----LRPIY---FLDPNIKDKVGINRLRFL 59
I+WF DLR+HDN L+ A +E +R H L+ +Y FL I D + F
Sbjct: 33 IYWFNHDLRLHDNKLLQKA-SEHVDRLHCVYFDELKTMYDRRFLPVEIDDSA---KREFK 88
Query: 60 LQSLEXXXXXXXXXXTCLYVLR----GKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDE 115
+Q+L L+ + +AV L ++FD + + L V +
Sbjct: 89 MQALGELNQSLMQLGQVLHQVSVTSLDEAVSQLEQMFDYYSITDL--YVANSASWYIDYV 146
Query: 116 YIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNV 175
+ + ++ + +++ +++ +L + +P ++ +F + ++SI V P + +
Sbjct: 147 VTKALLKRTDIVLHRDDTESLFH-QTLLPFDLEDLPHSFTRFKNKMESIVVPSPSQTTTQ 205
Query: 176 LSSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFE 235
L D +Y L++ GGE L + Y + + +
Sbjct: 206 LPRPMNNRDGLPASYGCEP-SSLKLHSSV------RGGELAGLGHVRDYFATQAALSYKS 258
Query: 236 KPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFY 295
N N S+T S ++++G +S + +L E ++ +L+WRE++
Sbjct: 259 TRNELDNW--SSSTKFSLWLANGNVSPRAVVNQLHRFEQKHGSNESTYWILFELLWREYF 316
Query: 296 --YTAGTGVANFDKMVGNAICIQIPWTKNDAF-LKAWAEGKTGYPFVDAIMRQLKQEGWI 352
Y+ G F I + P T A L+ W EG T +P V+A M QL++ G++
Sbjct: 317 HWYSHKYGAKLF---AFGGIQDKRPLTTFYASRLRQWVEGNTPFPIVNACMNQLRETGYM 373
Query: 353 HHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVY 412
+ R +VA L +L + W GA F+ L+DYD N GNW +L+ + R +
Sbjct: 374 SNRGRQLVASCLVH-ELSLDWRYGACYFQHMLIDYDVGSNWGNWQYLAGVGADPRGNRKF 432
Query: 413 SPVAFGQKTDKEGVYIKKY 431
Q D E V+I+K+
Sbjct: 433 DLDKQSQLYDPESVFIRKW 451
>UniRef50_A0LR66 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Acidothermus cellulolyticus 11B|Rep:
Deoxyribodipyrimidine photo-lyase - Acidothermus
cellulolyticus (strain ATCC 43068 / 11B)
Length = 497
Score = 88.6 bits (210), Expect = 3e-16
Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 9/156 (5%)
Query: 286 MGQLMWREFY-----YTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVD 340
+ +L WREF+ + ++D +G + + + F AWA G+TGY VD
Sbjct: 311 LAELAWREFFADVLWHRPDAAWHSWDP-IGRHLAVDDGPQARERFT-AWARGETGYGLVD 368
Query: 341 AIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS 400
A MRQL EGW+H+ R + A FL + DL + W GA+ F +L+D D + N NW W++
Sbjct: 369 AGMRQLLSEGWMHNRVRMVSASFLVK-DLHLDWRWGARWFLWHLVDGDIASNNLNWQWVA 427
Query: 401 A-SAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPEL 435
Y R+++P ++ D +G Y ++Y +L
Sbjct: 428 GIGTDAAPYHRIFNPDRQAERFDPDGAYRRRYCADL 463
Score = 38.7 bits (86), Expect = 0.30
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 2 SKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQ 61
+K P +++WFR DLR+ D+ AL A A + P++ +DP G NR +FL
Sbjct: 29 TKRP-IVYWFRRDLRLADSPALVAAARAAGAEP--IVPLFVVDPRAGRGAGPNRWQFLAS 85
Query: 62 SLE 64
LE
Sbjct: 86 CLE 88
>UniRef50_Q6SFP7 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=1; uncultured bacterium 580|Rep:
Deoxyribodipyrimidine photolyase family protein -
uncultured bacterium 580
Length = 478
Score = 88.2 bits (209), Expect = 4e-16
Identities = 109/445 (24%), Positives = 186/445 (41%), Gaps = 36/445 (8%)
Query: 3 KTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPN-IKDKVGINR-LRFLL 60
K T I W + DLR+ D+ L EA R +Y +P+ I D R RF+
Sbjct: 2 KPKTNIVWLKRDLRLTDHAPLY----EATCRDEQFLVLYIYEPSLINDSHTDERHWRFIQ 57
Query: 61 QSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDI 120
QSL L + G+A + ++ + ++ + + + Y D
Sbjct: 58 QSLSVMEKILAKQSKQLSIAYGEADQIFSEIINQHEITNVFSHEETGLKLT----YERDK 113
Query: 121 AEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHC 180
KK +F K++Q Y + V+R N T++K + V ++E I+ N+ ++
Sbjct: 114 KLKK-IFNAKKIQWHEYQTNAVIRGLNNRK--TWEKQWNKV----MREEIKTINLAEANI 166
Query: 181 KPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSS 240
I NYSIP + ++ P GG K ++ + + + K S
Sbjct: 167 --ISHNFPNYSIPKFR----NDLNYQP----GGCLPGQKEMHDFFETRGQ--DYFKFISK 214
Query: 241 PNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGT 300
P+ S + LSPYI++G LS + Y L + N +L +L W +
Sbjct: 215 PDRSRTSCSRLSPYIAYGNLSMREVYQTLLKSWNKTGWRRSMAALSSRLHWHCHFIQKYE 274
Query: 301 GVANFDKMVGNAICIQIPWT----KNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLA 356
+ + + N P+ +++ FL AWA G+TGYP +DA MR LK+ G+++
Sbjct: 275 SEIDIEDLPINRGYKDFPYKVINCEHEDFL-AWANGETGYPLIDASMRALKKTGYLNFRM 333
Query: 357 RHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVA 416
R MV F I W+ AK LD++ ++ + + A R+Y+P
Sbjct: 334 RAMVVSFACH-YFMIHWKLVAKHLATLFLDFEPGIHYPQ-IQMQAGVTGINTIRIYNPSK 391
Query: 417 FGQKTDKEGVYIKKYVPELKKYPRE 441
Q D + +I+ ++ EL +E
Sbjct: 392 QLQDHDPDTKFIRDWIDELSDQDKE 416
>UniRef50_A6GLE5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Limnobacter sp. MED105|Rep: Deoxyribodipyrimidine
photolyase - Limnobacter sp. MED105
Length = 453
Score = 88.2 bits (209), Expect = 4e-16
Identities = 98/438 (22%), Positives = 188/438 (42%), Gaps = 37/438 (8%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPN--IKDKVGINRLRFLLQSLEXXX 67
WF+ DLR+ D++ L A+ A++ L+ P+Y +P+ + F+ + L+
Sbjct: 5 WFKRDLRLSDHMPLFEAMRNAKHHG-LVLPLYIHEPSQILDAHTARQHQLFVHECLDDLQ 63
Query: 68 XXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQ--QDEYIEDIAEKKG 125
L+ G+AVD+L L ++ +L + +F Q +D + + +G
Sbjct: 64 QQFAKVGGYLHEELGEAVDVLAALHAQFKFTHLWAHQETT-QFAQYQRDRAVAAWCKSEG 122
Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDI 185
V ++ Q+ V R N +Q +L+ +K P + +P +
Sbjct: 123 VVFHELPQNNVQRA----RGNKA----DFQTYLNRAAQEEIKNPAGRNLQAFFAPRPPPV 174
Query: 186 QSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIE 245
+ ++PN E+ P++ GG T+A + + + + + SSP
Sbjct: 175 L-KRCNVPNAA----GEDK--PLRMKGGRTQARAVAAKFFTPAK-LKSYPFSISSPLKAW 226
Query: 246 PSTTVLSPYISHGCLSAKLFYYKLKEVEN-----GRQHTLPPVS-----LMGQLMWREFY 295
+ LSPY+++G +S + KL + N G + V + +L+WR+ Y
Sbjct: 227 NGCSRLSPYLAYGVVSDREVLQKLNALVNTVHGQGDSVLISKVEDAARFYVDRLIWRQGY 286
Query: 296 YTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHL 355
+ N + +A P N FL AW G+TG+ ++DA L+Q GW++
Sbjct: 287 LQQ---LENHTGLETDAFYGDEPAEVNQEFLNAWQHGRTGFAYIDACQHFLQQTGWLNMR 343
Query: 356 ARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPV 415
AR + F L + W+ A LD++ +++ G S ++ F + VY P+
Sbjct: 344 ARATLVSFAC-VQLGLPWQPVALYLAQQFLDFEPAIHYGQVRIASGTSHFSQML-VYDPL 401
Query: 416 AFGQKTDKEGVYIKKYVP 433
+ D +G ++K+++P
Sbjct: 402 KQQAEQDPKGEFVKRWLP 419
>UniRef50_A4BCW2 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Reinekea sp. MED297|Rep: Deoxyribodipyrimidine
photolyase - Reinekea sp. MED297
Length = 433
Score = 87.8 bits (208), Expect = 5e-16
Identities = 57/195 (29%), Positives = 106/195 (54%), Gaps = 11/195 (5%)
Query: 210 YHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKL 269
+ GGE+EAL+ L+ Y++ ++ +++ ++ + + S++ +SP+++ G LSA+ KL
Sbjct: 193 FDGGESEALRHLDCYLAS-DYPQTYKRDRNAIDDWD-SSSKMSPWLNAGNLSARRLKQKL 250
Query: 270 KEVENGRQHTLPPVSLMGQLMWREFYY----TAGTGVANFDKMVGNAICIQIPWTKNDAF 325
E + + L +L+WRE++ + GT + +F + + +D F
Sbjct: 251 DEYDQQHGASDGTHWLFVELLWREYFQWLAQSIGTKLFHFQGLSEHKPLTSF---YSDRF 307
Query: 326 LKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLL 385
+ W EG T + V+A MRQLK+ G++ + R + A L +L + W GA FE L+
Sbjct: 308 -RNWREGNTPWAIVNACMRQLKETGYLSNRGRQIAASALV-NELALDWRYGAAWFEYCLV 365
Query: 386 DYDWSLNAGNWMWLS 400
DYD + N GNW +++
Sbjct: 366 DYDVASNWGNWQYIA 380
>UniRef50_A3JBH1 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Marinobacter sp. ELB17|Rep: Deoxyribodipyrimidine
photolyase - Marinobacter sp. ELB17
Length = 519
Score = 86.2 bits (204), Expect = 2e-15
Identities = 104/463 (22%), Positives = 197/463 (42%), Gaps = 51/463 (11%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLR--FLLQSLEX 65
I W + +LR+ D+ ++ A +K + P+Y +P + + ++R F+ ++LE
Sbjct: 3 IFWLKRNLRLQDSEPFFESMR-AFRKKGKVLPLYCHEPELIQQPDVSRQHQLFIQETLEE 61
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQV-KYLTCQVDIDPEFVQQDEYIEDIAEKK 124
L G+ VD+L ++ + K T Q Q+D+ +
Sbjct: 62 LDRDFQSIGGKLLQAVGETVDVLDRIHRVQPLTKIWTHQETTQNSQFQRDKAVAAWCADH 121
Query: 125 GVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPID 184
GV + + Q+ + P + + + S +++PI L+ P+
Sbjct: 122 GVELLELAQNGI--------ARGSQKPELFPPYFACSVSSKLRDPIGTD--LAERFAPLP 171
Query: 185 IQS-ENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNS 243
S + +IP K D+ P++ GG ++A+K LN + + ++ ++ SSPN+
Sbjct: 172 FPSCDPKAIP--KAAGTDK----PLRQKGGRSQAIKNLNRFFTVP-YLKQYPFQISSPNT 224
Query: 244 IEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSL----------MGQLMWRE 293
+ +S Y+++G +S + + + V + + +L WR
Sbjct: 225 AWQGCSRISTYLAYGIVSDRELFQAVDRVVTDAHSRMNADQFGKFQENARFYLDRLSWRR 284
Query: 294 FY---YTAG------------TGVANFDKMVGNAIC-IQIPWT-KNDAFLKAWAEGKTGY 336
Y + A GV D G+++ P + +++ AW +G TG+
Sbjct: 285 QYMQTFEASPELEFQCMLAQFNGVREADYSEGHSLTHSSTPSSGQSEQHFTAWKQGLTGF 344
Query: 337 PFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNW 396
P++DA MR L Q GWI+ R + F T +LWI + A+ LDY+ ++
Sbjct: 345 PYIDAAMRFLNQTGWINMRLRATLVSFATM-NLWIPTTKVAEYLATEFLDYEPGIHHVIH 403
Query: 397 MWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYP 439
++ + F + VY PV G+ D +G +I+K+VPEL P
Sbjct: 404 QIIAGTTEFNE-LMVYDPVKQGRDHDLDGHFIRKWVPELADVP 445
>UniRef50_A0HIH4 Cluster: DNA photolyase, FAD-binding; n=1;
Comamonas testosteroni KF-1|Rep: DNA photolyase,
FAD-binding - Comamonas testosteroni KF-1
Length = 431
Score = 85.8 bits (203), Expect = 2e-15
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 8/218 (3%)
Query: 212 GGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKE 271
GGE+ AL L Y+++ +++ + ++ S+ S +++ G LS + Y +L++
Sbjct: 213 GGESAALAHLRQYLARG-LPHSYKRTRNGLVGLDYSSK-WSLWLATGALSPRQAYAELRQ 270
Query: 272 VENGRQHTLPPVSLMGQLMWREFYYTAGT--GVANFDKMVGNAICIQIPWTKNDAFLKAW 329
E R T L +L+WR+++ G A + + ++ +D AW
Sbjct: 271 FEATRGATESSYWLWFELLWRDYFRFLHMQHGRALYR---ARGLGPELATPHDDQNFAAW 327
Query: 330 AEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDW 389
G+TG VDA MR+L G++ + R + A +L DL W GA FE LLDYD
Sbjct: 328 CSGQTGQTLVDAAMRELAATGYLGNRLRQVAASYLIH-DLGCDWRAGAAWFESQLLDYDV 386
Query: 390 SLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVY 427
N GNW++++ + R + PV D +G Y
Sbjct: 387 YSNQGNWLYIAGRGTDPQGGRRFDPVKQAATYDADGAY 424
>UniRef50_A6GPG1 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=1; Limnobacter sp. MED105|Rep:
Deoxyribodipyrimidine photolyase family protein -
Limnobacter sp. MED105
Length = 559
Score = 84.2 bits (199), Expect = 6e-15
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 328 AWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDY 387
AW EG+TG+P VDA MR L+ GW++ R M+ F + LW+ W A + LDY
Sbjct: 350 AWIEGRTGFPMVDACMRMLRATGWVNFRMRAMLVAFASY-QLWLDWRHTAPMLAREFLDY 408
Query: 388 DWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYP 439
+ ++ + + + R+Y+PV + D +GV+I++++PELK P
Sbjct: 409 EPGIHYPQFQ-MQSGVTGINTLRIYNPVKQAKDHDPQGVFIRRWIPELKNIP 459
Score = 35.1 bits (77), Expect = 3.7
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 208 VKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYY 267
++ GG +A + L+ ++S++ +FE SSP S E + + LSPY++ G +S +
Sbjct: 216 LRQRGGRQQAQRCLSEFLSERGMNYRFEM--SSPLSAESACSRLSPYLAFGVISIREMLE 273
Query: 268 KLKEVENGRQHTLPPVSLMGQLMWRE 293
L + +Q T + Q W++
Sbjct: 274 ALSQAR--QQLTESSLLPKAQTQWKQ 297
>UniRef50_UPI0000E0FEC6 Cluster: deoxyribodipyrimidine photolyase,
putative; n=1; alpha proteobacterium HTCC2255|Rep:
deoxyribodipyrimidine photolyase, putative - alpha
proteobacterium HTCC2255
Length = 501
Score = 83.4 bits (197), Expect = 1e-14
Identities = 105/440 (23%), Positives = 173/440 (39%), Gaps = 23/440 (5%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAEN--RKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEX 65
I WF+ DLR+ D+ L ++ ++ P DP+ ++ RF++QSL
Sbjct: 7 IVWFKRDLRLRDHAPLCRVMHNPRPILLLYIFEPDLIHDPHYSER----HWRFVVQSLVD 62
Query: 66 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 125
T + VL+G + L + + +I E Y+ D A ++
Sbjct: 63 LQAQLSEFQTQVLVLQGAVQTVFDTLLSQCDIGNVYSHEEIGIELT----YVRDRAMQQ- 117
Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDI 185
F ++ T V R N + + K + + I V + + +
Sbjct: 118 YFHQHHIKWTETPYSVVRRGLNHRQDWSKYWHEMMEKPCDDPDLAAIPFVSQTMVEQLTH 177
Query: 186 QSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIE 245
Q+ L Q E P GGE A ++ ++ + + SSP
Sbjct: 178 QALAIQDIELPTPQWSESH--PNFQIGGEKRAWHTYYSFLDQRGK--SYARHISSPELSR 233
Query: 246 PSTTVLSPYISHGCLSAKLFYYKLKEV-ENGRQHTLPPVSLM-GQLMWREFYYTAGTGVA 303
S T LSPYI+ G ++ K Y KL + E Q +S M +L W +
Sbjct: 234 KSCTRLSPYIAWGNITIKQTYQKLDTLNEADYQGWKRALSAMVSRLHWHCHFIQKFESEC 293
Query: 304 NFDKMVGNAICIQIPWT-KNDAF---LKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHM 359
+ N P+ D LKAW G TG P VDA MR + G+I+ R M
Sbjct: 294 AMEMRPVNHAYQAYPYEIDQDVISRRLKAWKTGTTGIPIVDANMRAVIATGYINFRMRAM 353
Query: 360 VACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQ 419
+ L+ + W G K LD++ ++ + + A R+Y+P+ Q
Sbjct: 354 LVSVLSH-HFNLDWRLGVKHLAAQFLDFEPGIHYPQFQ-MQAGVTGTNTIRLYNPIKQSQ 411
Query: 420 KTDKEGVYIKKYVPELKKYP 439
+ D +G +IK++VPEL++YP
Sbjct: 412 EKDPQGRFIKQWVPELREYP 431
>UniRef50_Q5V0Z1 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Haloarcula marismortui|Rep: Deoxyribodipyrimidine
photolyase - Haloarcula marismortui (Halobacterium
marismortui)
Length = 534
Score = 83.4 bits (197), Expect = 1e-14
Identities = 68/246 (27%), Positives = 109/246 (44%), Gaps = 14/246 (5%)
Query: 201 DEETLAPVKY---HGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISH 257
D +AP K GG A +RL+ + + + + S+P T+ LSPY++
Sbjct: 197 DHYDIAPSKSDVPRGGTGPARERLSAFAER---IDDYPGNISAPVDARDGTSGLSPYLAF 253
Query: 258 GCLSAK-LFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANFDKMVGNAICIQ 316
GCLS + + Y + +GR + + +L W + Y + + N +
Sbjct: 254 GCLSVRQVIQYIDEHAPDGRGKEM----FVSRLFWNKHYEQKLEDWPGWLETAVNPVLEG 309
Query: 317 IPWTKNDAFL-KAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEE 375
+ D L AW G+TG+P VDA MR L+Q GW++ R M A L W
Sbjct: 310 FNAEQYDPDLVAAWKHGQTGFPMVDASMRCLRQTGWLNFRMRSMSASVYYH-LLQQPWRI 368
Query: 376 GAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPEL 435
GA F +L+D ++N W R+Y+P + D +G +I+++VPEL
Sbjct: 369 GADWFYHHLIDASAAINYTQWQ-SQCGLVGKPALRLYNPRKQVRDQDPDGEFIRQWVPEL 427
Query: 436 KKYPRE 441
+ P E
Sbjct: 428 ESLPDE 433
>UniRef50_Q18K78 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Halobacteriaceae|Rep: Deoxyribodipyrimidine photolyase -
Haloquadratum walsbyi (strain DSM 16790)
Length = 719
Score = 83.4 bits (197), Expect = 1e-14
Identities = 62/204 (30%), Positives = 88/204 (43%), Gaps = 6/204 (2%)
Query: 239 SSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTA 298
S+P T+ LSPY + G LS + + + V N +L+W Y
Sbjct: 326 SAPQDARTGTSGLSPYFNFGLLSIRQVH---QYVNNNTPECRGRRMFTSRLIWNCHYNQK 382
Query: 299 GTGVANF-DKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLAR 357
A + D+ V A N A + AW G+TG+P VDA MR L++ GW++ R
Sbjct: 383 LADWAGWTDRAVNPAFEEFNADRHNPALVDAWKHGQTGFPMVDASMRCLRETGWLNFRMR 442
Query: 358 HMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAF 417
M T L W GA F +L+D D +N W A RVY+P
Sbjct: 443 AMCVSIFTH-ILQQPWWIGADWFHHHLIDSDVGINYTQWQ-SQAGLIGKPSQRVYNPRKQ 500
Query: 418 GQKTDKEGVYIKKYVPELKKYPRE 441
+ D +G +I K+VPEL P +
Sbjct: 501 VRDHDSDGEWITKWVPELSDLPAQ 524
>UniRef50_Q4PFI2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 881
Score = 83.0 bits (196), Expect = 1e-14
Identities = 64/255 (25%), Positives = 119/255 (46%), Gaps = 31/255 (12%)
Query: 212 GGETEALKRLNLYM--SKKEWVCKFEKPNSSP--------NSI--EPSTTVLSPYISHGC 259
GGE+ AL+RL+ Y K ++ K + P N++ +T +SP++++G
Sbjct: 331 GGESSALERLDWYFVRGKSADSSRWGKSDPPPVARYKQTRNNLIGHAYSTKMSPFLAYGS 390
Query: 260 LSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANFDKMVGNAICIQIP- 318
+S + + L + E + +L+WR++++ + +G P
Sbjct: 391 VSPRQIWEALDDHERKFGEDQNTYWVRFELLWRDYFFFVAEKFGHLLYDLGGFERATDPR 450
Query: 319 ----------WTKNDAF-------LKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVA 361
W K D + EG+TG PF+DA + +L++ G++ + R VA
Sbjct: 451 QAAKKMEDGWWRKWDPLKDGPDHEMTRLLEGRTGIPFIDANILELRESGFMSNRGRQNVA 510
Query: 362 CFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKT 421
FL++ DL W GA+ F+ +L+DYD + N GNW +++ + R ++ V +
Sbjct: 511 SFLSK-DLGYDWRIGAEFFQSHLIDYDPTSNYGNWQYVAGVGNDPRASRQFNTVKQAKDY 569
Query: 422 DKEGVYIKKYVPELK 436
D G Y+K ++P L+
Sbjct: 570 DSHGDYVKLWIPALR 584
>UniRef50_Q28R72 Cluster: Deoxyribodipyrimidine photolyase; n=5;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Jannaschia sp. (strain CCS1)
Length = 517
Score = 81.8 bits (193), Expect = 3e-14
Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 11/261 (4%)
Query: 185 IQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSI 244
+ E SIP+ ++L + + P + GG L L +++ + ++ + SSP
Sbjct: 164 VSEEPGSIPDARDLALAFDP-CPGRQAGGRDGGLATLASFLTARGQ--EYRRAMSSPLDG 220
Query: 245 EPSTTVLSPYISHGCLSAKLFYYKLK----EVENGRQHTLPPV-SLMGQLMWRE-FYYTA 298
+ + LSP+++ G LS++ + + EV+ R L + S ++ WR+ F
Sbjct: 221 AAACSRLSPHLAWGTLSSREVLHGMAARRAEVKGTRDGWLGSLRSFEARVAWRDHFMQKL 280
Query: 299 GTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARH 358
A + + +A P + L AW +G+TG PFVDA MR L GWI+ R
Sbjct: 281 EDQPAMEIRCLHSAYEDLRPNVPDATRLSAWEKGETGIPFVDACMRSLIATGWINFRMRA 340
Query: 359 MVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFG 418
M+A + LW+ W DY+ ++ M + A R+Y+PV G
Sbjct: 341 MLAA-VASYHLWLDWRRTGPHLARMFTDYEPGIHWPQ-MQMQAGTTGMNTIRIYNPVKQG 398
Query: 419 QKTDKEGVYIKKYVPELKKYP 439
D G + + + PEL++ P
Sbjct: 399 LDHDPTGTFTRTWCPELREVP 419
>UniRef50_A5GT79 Cluster: Deoxyribodipyrimidine photolyase; n=7;
Synechococcus|Rep: Deoxyribodipyrimidine photolyase -
Synechococcus sp. (strain RCC307)
Length = 503
Score = 81.8 bits (193), Expect = 3e-14
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 13/248 (5%)
Query: 192 IPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVL 251
IP+ +L++ + P + GG ++ L ++ + ++ K SSP + S + L
Sbjct: 192 IPSADDLKLPSDP-CPGRQRGGRSQGAALLESFLHHRGR--RYAKELSSPLTAFESCSRL 248
Query: 252 SPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANFDKMVGN 311
S +++ G LS + + + NG P + + +L W + + + +
Sbjct: 249 SAHLTFGTLSMREIVQTAR-LNNG------PKAFVERLHWHCHFIQKLESQPSLEYQNAH 301
Query: 312 AICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWI 371
+ + L W EG+TG+PFVDA MR L+ GWI+ R M+ + LW+
Sbjct: 302 RAYDGLR-ADDPQRLALWIEGRTGWPFVDACMRALRHHGWINFRMRAMLMS-VASYQLWL 359
Query: 372 SWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKY 431
W + + +DY+ ++ N + + R+Y+P+ G D EG +I+++
Sbjct: 360 PWRQSGEALARLFVDYEPGIH-WNQCQMQSGTSGINTVRIYNPIKQGLDHDPEGAFIRQW 418
Query: 432 VPELKKYP 439
+PEL+ P
Sbjct: 419 LPELQGVP 426
>UniRef50_A1SV40 Cluster: Deoxyribodipyrimidine photo-lyase; n=9;
Gammaproteobacteria|Rep: Deoxyribodipyrimidine
photo-lyase - Psychromonas ingrahamii (strain 37)
Length = 517
Score = 80.2 bits (189), Expect = 1e-13
Identities = 98/444 (22%), Positives = 177/444 (39%), Gaps = 36/444 (8%)
Query: 8 IHWFRLDLRIHDNLALRNAINEAENRKH-LLRPIYFLDPNIKDKVGINRLRFLLQSLEXX 66
I W + DLR+ D+ L +I + + P+ DP+ DK RF+ QS+E
Sbjct: 18 IVWLKRDLRLSDHQPLSESIQSGLTLLYYVFEPLLIADPHY-DK---RHWRFIWQSIEDI 73
Query: 67 XXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDP-EFVQQDEYIEDIAEKKG 125
+YV G AV L ++ + + L ++ ++D+ + + +
Sbjct: 74 NTQLSAFNAQIYVYFGDAVAGLNEIQQRFNITGLFSHEEVGLLSTFERDKAVNKWCKAQN 133
Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDI 185
+ ++ V K NN + + ++K+ + + + +LS C
Sbjct: 134 IVWHESASGAVTRGKK--NRNNWD-----KDWRKIMKAELCQPALSCNTLLSKQCLE--- 183
Query: 186 QSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIE 245
+P L + T GGE A K L +++ + F+ S P +
Sbjct: 184 -----RLPQFI-LPVSWSTPDDFMLKGGELWAQKMLQSFLNGRGKNYHFDI--SKPQASR 235
Query: 246 PSTTVLSPYISHGCLSAKLFYY--KLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVA 303
S + LSPY++ G +S + FY +K +NG + P +L +L W +
Sbjct: 236 KSCSRLSPYLAWGNISLRQFYQIILMKRPQNGWKR--PIDALASRLHWHCHFIQKFESEH 293
Query: 304 NFDKMVGNAICIQIPWT------KNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLAR 357
N + + L W +TGYP VDA M L + G+I+ R
Sbjct: 294 QMQWRPVNRAYSNFSYPDLHCGLSVETRLNKWKTAQTGYPLVDACMLCLIKTGYINFRMR 353
Query: 358 HMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAF 417
M+ FL L + W G LD++ ++ + + + RVY+PV
Sbjct: 354 AMLVSFLCH-HLLLDWRLGVSYLAKLFLDFEPGIHYPQFQ-MQSGVTGTNIIRVYNPVKQ 411
Query: 418 GQKTDKEGVYIKKYVPELKKYPRE 441
+ DK+G++I+ ++P+L + P E
Sbjct: 412 SLEKDKDGLFIRTWLPQLSELPNE 435
>UniRef50_Q4E3Z7 Cluster: DNA photolyase, putative; n=4;
Trypanosoma|Rep: DNA photolyase, putative - Trypanosoma
cruzi
Length = 875
Score = 79.8 bits (188), Expect = 1e-13
Identities = 62/197 (31%), Positives = 91/197 (46%), Gaps = 9/197 (4%)
Query: 251 LSPYISHGCLSAKLFYYKLKE--VENGRQHTLPPV--SLMGQLMWREFYYTAGTGVAN-- 304
+SPY+S+G LS + FY L+ EN R + + + +L R++++ G
Sbjct: 545 VSPYLSNGSLSPRRFYEMLRRYATENLRDNFVQMQYREALLRLSRRDYWHWMGLRYGPLL 604
Query: 305 -FDKMVGNAICIQIP-WTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVAC 362
F IP W ++ ++ W G TG PF DA MR+L G++ H R +A
Sbjct: 605 FFPYGPRPEQTDNIPDWRHDEKIVQKWCAGLTGVPFADAAMRELLTTGFVAHEGRQALAW 664
Query: 363 FLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTD 422
LTRG W GA+ E LDYD L GN+ + S V S D
Sbjct: 665 LLTRG-YGQDWRLGAEWLERCSLDYDPFLCYGNFAYFSELILDDFGEPVRSVHWLAHHHD 723
Query: 423 KEGVYIKKYVPELKKYP 439
+ G+Y+KK++P L K P
Sbjct: 724 QTGIYVKKWLPLLSKIP 740
>UniRef50_A4S782 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 565
Score = 79.0 bits (186), Expect = 2e-13
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 19/222 (8%)
Query: 233 KFEKPNSSPNSIEPST-TVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMW 291
KFE + + + P+ + LSPY+ HG +S + Y++L + G + ++ W
Sbjct: 151 KFEDDHGRADIVAPAAVSTLSPYLRHGQISPRQIYHELATKKMGSDGV--EGKKLSRVFW 208
Query: 292 REFYYT--AGTGVANFDKMVGNAICIQIP----WTKND---AFLKAWAEGKTGYPFVDAI 342
Y A + N+ ++ ++ W + D L W G TG+P VDA
Sbjct: 209 HRLYRREFAYWQLHNWPELPSKSVRGHYENRKAWLEGDEAAVALHRWQTGTTGFPTVDAG 268
Query: 343 MRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSAS 402
MR+L GW+H R + A FL + W GA F D L+D D ++N + MW +A
Sbjct: 269 MRRLWATGWMHQSERMIAATFLV-DYCGVHWTHGADWFLDTLVDADLAIN--SMMWQNAG 325
Query: 403 AFFYKYFRVY----SPVAFGQKTDKEGVYIKKYVPELKKYPR 440
+ V+ +P + D EG I +++PEL P+
Sbjct: 326 KSGLDQWDVFAGSLTPDGSSRAHDPEGESIARWIPELAALPK 367
>UniRef50_Q2S050 Cluster: Deoxyribodipyrimidine photolyase,
putative; n=1; Salinibacter ruber DSM 13855|Rep:
Deoxyribodipyrimidine photolyase, putative -
Salinibacter ruber (strain DSM 13855)
Length = 537
Score = 77.4 bits (182), Expect = 7e-13
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 324 AFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDY 383
A AW G+TG+P VDA MR L+ GW++ R M+ C D W+ W A +
Sbjct: 355 ALYDAWLHGRTGFPMVDACMRHLRATGWLNFRMRAML-CSFAAYDCWLDWRRFAPTYGGL 413
Query: 384 LLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPEL 435
+ DY ++ S + + R+Y+PV G++ D +G +I+++VPEL
Sbjct: 414 MADYVPGIHYPQVQMQSGTTGINR-VRIYNPVKQGKEQDPDGTFIRRWVPEL 464
>UniRef50_Q1VN24 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Psychroflexus torquis ATCC 700755|Rep:
Deoxyribodipyrimidine photolyase - Psychroflexus torquis
ATCC 700755
Length = 380
Score = 77.0 bits (181), Expect = 9e-13
Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 5/178 (2%)
Query: 212 GGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKL-K 270
GG EA L+ ++ K + SSP+ E S + LSP+I+ GC+S + Y KL K
Sbjct: 191 GGSDEAYSLLDTFL--KHRCAGYSFKMSSPHEAEHSCSRLSPHIAFGCISIREIYQKLLK 248
Query: 271 EVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWA 330
E+E + S +L W + + + + ++ N+ ++ W
Sbjct: 249 ELEI-TSYKKDLNSFKKRLYWHCHFIQKLETEPELEFKSMHPMADELRQDINNELIEKWI 307
Query: 331 EGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYD 388
G+TG+PF+DA ++ L++ GWI+ R M+ F + +LW W++ + + + +DY+
Sbjct: 308 MGETGFPFLDACIQYLRKGGWINFRMRAMIMSFASY-NLWQPWQKTSPLLAELFVDYE 364
>UniRef50_Q9KS67 Cluster: Cryptochrome-like protein cry2; n=15;
Gammaproteobacteria|Rep: Cryptochrome-like protein cry2
- Vibrio cholerae
Length = 504
Score = 76.2 bits (179), Expect = 2e-12
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 5/204 (2%)
Query: 239 SSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTA 298
SSP+ + + +SPY++ G +S + Y L + + ++L +L W +
Sbjct: 218 SSPSLARHACSRMSPYLAWGNISLREMYQTLLKHWSVAGFRRSLIALSSRLHWHCHFIQK 277
Query: 299 GTGVANFDKMVGNAICIQIPWTKNDA---FLKAWAEGKTGYPFVDAIMRQLKQEGWIHHL 355
+ N + +DA L AW G TG P VDA MR L Q G+++
Sbjct: 278 FESECEMEFRCVNRAYDSLLQQSSDAPAAQLAAWQTGHTGIPLVDACMRCLIQTGYLNFR 337
Query: 356 ARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPV 415
R M+ LT + + W G LD++ ++ + + A R+Y+P
Sbjct: 338 MRAMLVSVLTH-HMNVDWRAGVTYLAQLFLDFEPGIHYPQFQ-MQAGVTGTNTIRIYNPT 395
Query: 416 AFGQKTDKEGVYIKKYVPELKKYP 439
Q+ D EG +I K+VPEL + P
Sbjct: 396 KQAQEHDSEGQFIHKWVPELAQVP 419
>UniRef50_A0YDZ0 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Proteobacteria|Rep: Deoxyribodipyrimidine photolyase -
marine gamma proteobacterium HTCC2143
Length = 528
Score = 75.4 bits (177), Expect = 3e-12
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Query: 322 NDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFE 381
N+ +AWA G TGYPF+DA MR L +GWI R M+ F + LW+ W
Sbjct: 327 NEERYQAWATGHTGYPFIDACMRNLIADGWITFRMRAMLVSFASY-QLWLDWRVIGDHLA 385
Query: 382 DYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPRE 441
D++ ++ + + + RVY+PV + D G YI+K+VPEL P E
Sbjct: 386 RLFTDFEPGIHYSQ-LQMQSGVTGINAMRVYNPVKQSIEHDPNGDYIRKWVPELADLPIE 444
>UniRef50_Q0UKK2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 677
Score = 74.9 bits (176), Expect = 4e-12
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 321 KNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIF 380
KN + + G+TG +DA R+L G+ + AR VA FL+ L I W GA+ +
Sbjct: 442 KNMETFQRFRSGRTGVGLIDASNRELFCTGYTSNRARQNVASFLS-SHLDIDWRIGAEWY 500
Query: 381 EDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKK 437
E L+DYD + N GNW +++ + R+++PV D +G YIK +VPEL++
Sbjct: 501 EMLLIDYDVASNWGNWQYVAGVGNDPRQGRIFNPVKQAFDYDGKGEYIKAWVPELRQ 557
>UniRef50_Q4QHY9 Cluster: DNA photolyase, putative; n=3;
Leishmania|Rep: DNA photolyase, putative - Leishmania
major
Length = 934
Score = 72.1 bits (169), Expect = 3e-11
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 251 LSPYISHGCLSAKLFYYKLKEVE--NGRQHTLPPVSLMG--QLMWREFYYTAGTGVAN-- 304
+SPYI+ G LS + +Y L+E N R + G +L R++++ G +
Sbjct: 599 VSPYIALGALSPRKYYEVLREFAQANQRDAFVQQQFREGLLRLSRRDYWHWMGLRFGDRL 658
Query: 305 -FDKMVGNAICIQIP-WTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVAC 362
F +P W + ++ W +G TG PF DA MR+L G++ R +A
Sbjct: 659 FFSYGPHPEHTDDVPEWRHDRKVVQRWCDGLTGIPFADAAMRELVGTGFVAQEGRQALAW 718
Query: 363 FLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAF-GQKT 421
LTRG W GA+ E LDYD + GN+ S + V + +
Sbjct: 719 LLTRG-YGQDWRLGAEWMERCSLDYDPFVCYGNYAH-SCGLMLDDFGEPVRNVYYLAHQH 776
Query: 422 DKEGVYIKKYVPELKKYP 439
D+ G+Y+KK++P+L K P
Sbjct: 777 DQTGIYVKKWLPQLSKVP 794
>UniRef50_Q7SI68 Cluster: Putative cryptochrome DASH, mitochondrial
precursor; n=3; Sordariomycetes|Rep: Putative
cryptochrome DASH, mitochondrial precursor - Neurospora
crassa
Length = 745
Score = 70.5 bits (165), Expect = 8e-11
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Query: 321 KNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIF 380
K L + G TG +DA R+L G+ + R VA FL + L I W GA+ +
Sbjct: 410 KVSEILARFNAGTTGMGLIDASQRELIHTGYTSNRTRQNVASFLAK-HLEIDWRYGAEWY 468
Query: 381 EDYLLDYDWSLNAGNWMWLSASAFFYK-YFRVYSPVAFGQKTDKEGVYIKKYVPELKKY 438
E L+DYD S N NW +++ + R+++PV DK+G Y++ +VPE+ K+
Sbjct: 469 EMLLVDYDVSSNWANWQYVAGVGNDPRGAARIFNPVKQAFDYDKDGTYVRTWVPEVAKF 527
>UniRef50_Q4I1Q6 Cluster: Putative cryptochrome DASH; n=1;
Gibberella zeae|Rep: Putative cryptochrome DASH -
Gibberella zeae (Fusarium graminearum)
Length = 678
Score = 68.5 bits (160), Expect = 3e-10
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Query: 329 WAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYD 388
W G TG VDA R+L+ G+ + AR VA +LT+ L I W GA+ +E L+DYD
Sbjct: 391 WIRGTTGMGLVDASQRELQLTGYTSNRARQNVASYLTKS-LGIDWRLGAEYYEQSLIDYD 449
Query: 389 WSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPR 440
N GNW + AS R ++ V D++G + + +V E+K R
Sbjct: 450 THSNWGNWQY-QASCGNDPRSRSFNQVKQAFDYDQDGRFTRTWVNEVKSIDR 500
>UniRef50_Q8LB72 Cluster: Blue-light photoreceptor PHR2; n=2;
Arabidopsis thaliana|Rep: Blue-light photoreceptor PHR2
- Arabidopsis thaliana (Mouse-ear cress)
Length = 447
Score = 66.9 bits (156), Expect = 1e-09
Identities = 75/308 (24%), Positives = 134/308 (43%), Gaps = 29/308 (9%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIK-------DKVGINRLRFLLQS 62
WFR DLR+HDN L +A +E + + P+Y DP DK G R +FL++S
Sbjct: 120 WFRNDLRVHDNECLNSANDECVS----VLPVYCFDPRDYGKSSSGFDKTGPFRAQFLIES 175
Query: 63 LEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAE 122
+ + L V GK +L +L + + ++ + V+ + IE +
Sbjct: 176 VSELRKNLQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHREVSHDEVKAEGKIETAMK 235
Query: 123 KKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKP 182
++GV + T+Y + L +P Y F V+ + +++ I + L S
Sbjct: 236 EEGVEVKYFWGSTLYHLDD-LPFKIEDLPSNYGAFKDKVQKLEIRKTIAALDQLKSLPSR 294
Query: 183 IDIQSENYSIPNLKELQIDEETLAPVK----YHGGETEALKRLNLYMSKKEWVCKFEKPN 238
D+ E IP+L +L I + GGETEAL RL + + +
Sbjct: 295 GDV--ELGDIPSLLDLGISPTPRTSQEGKPTMVGGETEALTRLKSFAADCQARLSKGNQK 352
Query: 239 SSPNSIEPS--TTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVS---------LMG 287
NS+ + + +SP+++ G +S + + +LK+ + + P + LM
Sbjct: 353 GGNNSVFGANFSCKISPWLAMGSISPRSMFDELKKTISASTTSTTPRNGPGDTGLNWLMY 412
Query: 288 QLMWREFY 295
+L+WR+F+
Sbjct: 413 ELLWRDFF 420
>UniRef50_A4B8N9 Cluster: Deoxyribodipyrimidine photolyase,
putative; n=1; Alteromonas macleodii 'Deep ecotype'|Rep:
Deoxyribodipyrimidine photolyase, putative - Alteromonas
macleodii 'Deep ecotype'
Length = 451
Score = 65.7 bits (153), Expect = 2e-09
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 18/232 (7%)
Query: 212 GGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKE 271
GGE A + L + + + + + S P + + LSPY++ G +S K Y ++
Sbjct: 225 GGERRAWQVLKDFFNDRGQY--YHQHISKPEYARRACSRLSPYLAWGNISIKQVYQSVQR 282
Query: 272 VENGRQHTLPP----------VSLMGQLMWREFYYTAGTGVANFDKMVGNAICIQIPWTK 321
++ ++ LP +L +L W + + + N+ P+
Sbjct: 283 QKH-KKRALPIHEKKRWSRALSALTSRLHWHCHFIQKFESEHSIEWRPMNSAYENFPYID 341
Query: 322 NDAFLKA---WAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAK 378
+ W+ G+TGYP VDA MR L+Q G+++ R MV FL L + W + A
Sbjct: 342 GPEAERRFYHWSIGQTGYPLVDACMRALRQTGYLNFRMRAMVTSFLCH-HLNVHWIKAAH 400
Query: 379 IFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKK 430
LD++ ++ + + AS R+Y+P + +K D EG +IKK
Sbjct: 401 YLATQFLDFEPGIHYPQ-IQMQASVTGIHTVRLYNPASQSKKLDPEGEFIKK 451
>UniRef50_A6S5S9 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 651
Score = 65.3 bits (152), Expect = 3e-09
Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 326 LKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLL 385
++ + G TG F+DA R+ G+ + AR VA FL + L+I W GA+ +E L+
Sbjct: 408 IERFLNGTTGMGFIDASQRECYHTGYTSNRARQNVASFLAK-HLYIDWRIGAEWYECMLV 466
Query: 386 DYDWSLNAGNWMWLSASAFFYK-YFRVYSPVAFGQKTDKEGVYIKKYVPELK 436
DYD S N GNW +++ + R+++PV D + Y+ +V EL+
Sbjct: 467 DYDVSSNWGNWQYVAGVGNDPRGNDRIFNPVKQAFDYDPKAEYVLAWVDELR 518
>UniRef50_A5GIC8 Cluster: FAD binding domain of DNA photolyase;
n=20; Bacteria|Rep: FAD binding domain of DNA photolyase
- Synechococcus sp. (strain WH7803)
Length = 340
Score = 63.3 bits (147), Expect = 1e-08
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 3/172 (1%)
Query: 240 SPNSIEPSTTVLSPYISHGCLS-AKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTA 298
S N ++ + T LSP+I HG L+ A++ ++ + Q L+ +L WR+F+
Sbjct: 101 SRNHLKGAVTRLSPWIRHGVLTLAEIREVVFAQLRDRGQGRDDGGKLINELGWRDFWQRM 160
Query: 299 GTGVAN-FDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLAR 357
+ + + + P + + EG+TG +D L GW+H+ AR
Sbjct: 161 WSDLGDSIHESQEELKTGHDPASYSRELPDDVREGRTGLACMDGFRDDLVSSGWLHNHAR 220
Query: 358 HMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYF 409
+A +L + W+ GA F ++LLD D + N +W W+++S YF
Sbjct: 221 MWMAAYLVHWRR-VHWKAGADWFLEHLLDGDPASNHLSWQWVASSFSHKPYF 271
>UniRef50_A1IU21 Cluster: Deoxyribodopyrimidine photolyase; n=3;
Neisseria|Rep: Deoxyribodopyrimidine photolyase -
Neisseria meningitidis serogroup A
Length = 433
Score = 62.5 bits (145), Expect = 2e-08
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 326 LKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLL 385
L W +G+TG P +DA MR L + G +H R + A F L + EG F L
Sbjct: 299 LTLWQQGRTGIPIIDAAMRCLHKTGSLHPALRRLSADFFCH-VLNLPRREGEIWFARQLT 357
Query: 386 DYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPEL 435
D+D ++N GNW L+AS A KTD +G ++++++PEL
Sbjct: 358 DFDAAINQGNWR-LAASR-----HTCPDIAAAAHKTDPDGTFVRRHIPEL 401
>UniRef50_Q2SQU0 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Hahella chejuensis KCTC 2396|Rep: Deoxyribodipyrimidine
photolyase - Hahella chejuensis (strain KCTC 2396)
Length = 491
Score = 61.7 bits (143), Expect = 4e-08
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 322 NDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFE 381
++A +AW G+TG+P +DA M+ L GWI++ R ++ F LW+ W E A
Sbjct: 305 DEAKFEAWKNGETGFPLIDAAMKALINYGWINYQLRGLLMSF-AANQLWLHWREPALHMA 363
Query: 382 DYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKK 437
DYD +++ + + ++ ++Y+PV + D G +I+ L++
Sbjct: 364 RLSTDYDPAVHFPLTQQFAGTTGMFEQ-KIYNPVTESHRLDPAGKFIRAECSALRE 418
>UniRef50_Q4PJE0 Cluster: Predicted deoxyribodipyrimidine
photolyase; n=3; environmental samples|Rep: Predicted
deoxyribodipyrimidine photolyase - uncultured bacterium
MedeBAC46A06
Length = 287
Score = 55.2 bits (127), Expect = 3e-06
Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 239 SSPNSIEPSTTVLSPYISHGCLSA-KLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYT 297
+S N ++ + T LSPYI HG LS ++ L V++ +Q + +L WR+++
Sbjct: 76 ASRNHLDGAVTRLSPYIRHGILSLDEVRNAALAMVDDPKQAE----KFIQELAWRDYWQR 131
Query: 298 AGTGVANFDKMVGNAICIQIPWTKNDA---FLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 354
+A+ + + + + + +D A G+TG +D + L + G++H+
Sbjct: 132 LY--LAHPEWIWADVESYKTGFDSSDYDPDLPDDIAAGETGVACIDQFIATLVETGYLHN 189
Query: 355 LARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYK 407
AR +A + +SW+ GA+ F +L+D D + N +W W+ AS F K
Sbjct: 190 HARMYLAAYTVHWRR-VSWQAGARWFLGHLIDADPASNNLSWQWI-ASTFSNK 240
>UniRef50_A6GV05 Cluster: Probable deoxyribodipyrimidine photolyase;
n=1; Limnobacter sp. MED105|Rep: Probable
deoxyribodipyrimidine photolyase - Limnobacter sp.
MED105
Length = 426
Score = 55.2 bits (127), Expect = 3e-06
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 242 NSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTG 301
N ++ + T LSP+I+HG LS + L E + L+ + WREF+ A
Sbjct: 33 NFLDGAVTGLSPWITHGYLSVREAAQLLME----KYRLSFEDKLIFEFAWREFFKHAHAE 88
Query: 302 VANFDKMVGNAICIQIP-WTK--NDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARH 358
+ N G ++ P W+ N + EG+TG +DA + L + G++H+ R
Sbjct: 89 LGN-----GILSDVRRPVWSGKYNQQLPEDIREGRTGVEAIDAGVALLYETGYLHNHVRM 143
Query: 359 MVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYK 407
+A ++ + W+ GA +LLD D + N +W W+ A F +K
Sbjct: 144 WIASYVVHMRK-VHWKVGADWMYAHLLDGDLASNHLSWQWV-AGTFSHK 190
>UniRef50_Q8DLE3 Cluster: Tll0552 protein; n=1; Synechococcus
elongatus|Rep: Tll0552 protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 276
Score = 54.4 bits (125), Expect = 6e-06
Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 242 NSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTG 301
N + T LS Y+ HG +S +++++ + +L+ QL WR+++
Sbjct: 70 NFLTGEVTGLSAYLRHGVISLAAVRDRVRQLVDDPSEA---EALLQQLAWRDYWQRLYAH 126
Query: 302 VANFDKMVGNAICIQIPWTKNDAFLK---AWAEGKTGYPFVDAIMRQLKQEGWIHHLARH 358
D++ + + W+ D A +TG +DA L++ G++H+ AR
Sbjct: 127 WG--DRLWQDIEPYKTGWSAVDYATDLPAALVAAETGLACMDAFSSDLQRTGYLHNHARL 184
Query: 359 MVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYK-YF 409
+A ++ + W+ GA F +LLD D + N +W W+ AS F +K YF
Sbjct: 185 WLAAYVVHW-CRVRWQAGAAWFLQHLLDGDPASNNLSWQWV-ASTFSHKPYF 234
>UniRef50_A3I0F4 Cluster: Putative uncharacterized protein; n=1;
Algoriphagus sp. PR1|Rep: Putative uncharacterized
protein - Algoriphagus sp. PR1
Length = 365
Score = 51.6 bits (118), Expect = 4e-05
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 15/194 (7%)
Query: 239 SSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTA 298
+S N + + T LSPYIS G +S + +K + L+ +L WR+++
Sbjct: 25 ASRNFQDGAVTQLSPYISRGVISTNQVFEYIKSLNFPWSQC---EKLVQELAWRDYWQQV 81
Query: 299 --GTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLA 356
G A F+ + +Q N A + KTG VD + L Q G++H+
Sbjct: 82 WLAKGEAIFEDLKNEQKPVQ-----NHQIPSAIIQAKTGIEAVDQGILDLYQTGYMHNHM 136
Query: 357 RHMVA--CFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSP 414
R VA C W++ AK +LLD D + N +W W++ + KY
Sbjct: 137 RMYVASICCNIANSHWLN---PAKWMYSHLLDGDLASNHLSWQWVAGAFSNKKYLANQEN 193
Query: 415 VAFGQKTDKEGVYI 428
+ ++++G ++
Sbjct: 194 INKYFNSEQKGTFL 207
>UniRef50_A3Z202 Cluster: Deoxyribodipyrimidine photolyase-related
protein; n=1; Synechococcus sp. WH 5701|Rep:
Deoxyribodipyrimidine photolyase-related protein -
Synechococcus sp. WH 5701
Length = 504
Score = 49.2 bits (112), Expect = 2e-04
Identities = 46/149 (30%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 249 TVLSPYISHGCLS-AKLFYYKLKEVE---NGRQHTLPPVSLMGQLM----WREFYYTAGT 300
++LSP ++ G LS A + L V+ NG Q +P SL G L WREF
Sbjct: 264 SLLSPLLNIGLLSPAGVIEATLAHVQRRQNGEQ-PVPIASLEGFLRQVIGWREF------ 316
Query: 301 GVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMV 360
V D++ G + W W +G TG P +DA + +L + G+ HH+ R MV
Sbjct: 317 -VRGIDRVHGETQASRNFWNHRRRLAPCWTDGSTGLPPLDAAIERLNRTGYNHHIERLMV 375
Query: 361 ACFLTRGDLWISWEEGAKIFEDYLLDYDW 389
L E E YL Y+W
Sbjct: 376 ISNLMLLCEIHPAEVQRWFMERYLDSYEW 404
>UniRef50_UPI0000F1E94A Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 487
Score = 48.8 bits (111), Expect = 3e-04
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Query: 1 MSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLR 57
++ P IHWFR LR+HDN AL+ A+ A+ +R +YFLDP +G+NR R
Sbjct: 423 VNMAPNSIHWFRKGLRLHDNPALQEAVRGADT----VRCVYFLDPWFAGSSNLGVNRWR 477
>UniRef50_A2C3R3 Cluster: DNA photolyase-like protein; n=2;
Prochlorococcus marinus|Rep: DNA photolyase-like protein
- Prochlorococcus marinus (strain NATL1A)
Length = 371
Score = 48.8 bits (111), Expect = 3e-04
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 16/160 (10%)
Query: 244 IEPSTTV--LSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTG 301
IE T V +S Y SH L KLK+ + +++T +++WR ++ G
Sbjct: 32 IEDRTNVSQISKYTSHRILYEFDIIEKLKKYDKKQKYT-------DEILWRIYW----KG 80
Query: 302 VANFDKMVGNAICIQIPWTKNDAFLKAWA-EGKTGYPFVDAIMRQLKQEGWIHHLARHMV 360
K + I N+++L + A GKTG D + +L++ ++H+ AR
Sbjct: 81 YLENYKSIWFEY-INFKENSNNSYLISSAINGKTGIDCFDTWIEELRENNYLHNHARMWF 139
Query: 361 ACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS 400
A L + W+ GA++F +LLD D + N +W W++
Sbjct: 140 ASIWIF-TLGLPWQLGARLFMKHLLDGDAASNTLSWRWVA 178
>UniRef50_Q2L1R0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Bordetella avium 197N|Rep: Deoxyribodipyrimidine
photo-lyase - Bordetella avium (strain 197N)
Length = 407
Score = 48.4 bits (110), Expect = 4e-04
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 242 NSIEPSTTVLSPYISHGCLSA-KLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGT 300
N ++ + + LSPY++HG LS +L L+ G + + +M +L WR ++
Sbjct: 34 NHLDGAVSRLSPYLTHGLLSLPELLGLNLQRDTQGFLNAVQHRWVM-ELGWRAYFQHV-- 90
Query: 301 GVANFDKMVGNAICIQIPWTKND-AFLKAW----AEGKTGYPFVDAIMRQLKQEGWIHHL 355
+D + P + D A+ E +TG P +D +R L G++H+
Sbjct: 91 ----WDARGDDIFASLRPGPRPDEAYATEMPPDICEARTGLPVIDLAVRTLYASGYLHNH 146
Query: 356 ARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASA 403
AR +A ++ + W A +LLD D N +W W++ +A
Sbjct: 147 ARLWLASYVVHA-RQVHWRCAADWLLGHLLDGDLGSNHLSWQWVAGTA 193
>UniRef50_A6DP25 Cluster: Deoxyribodipyrimidine photolyase-like
protein; n=2; Lentisphaera araneosa HTCC2155|Rep:
Deoxyribodipyrimidine photolyase-like protein -
Lentisphaera araneosa HTCC2155
Length = 365
Score = 48.4 bits (110), Expect = 4e-04
Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 19/173 (10%)
Query: 242 NSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVS-LMGQLMWREFYYTAGT 300
N ++ + + LSPYIS G +S + Y L + R + L + + +L WR+++ +
Sbjct: 28 NFLDGTVSCLSPYISRGVISTRTVYDSLIK----RGYNLEKIEKFVQELAWRDYWQSQW- 82
Query: 301 GVANFDKMVGNAICIQIPWTK----NDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIH-HL 355
K G I + T+ N +G+ + ++QL G++H H+
Sbjct: 83 ------KFYGIKINKDLRHTQQAFHNHGMPHCLVKGQCSIQMFNTAIKQLNSTGYLHNHM 136
Query: 356 ARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKY 408
++ G W + A+ L+D DW+ NA +W W++ KY
Sbjct: 137 RMYLAMSICNIGSY--HWHKPAQWMYYNLIDGDWASNALSWQWVAGCLNSKKY 187
>UniRef50_A2BST4 Cluster: DNA photolyase-like protein; n=5;
Prochlorococcus marinus|Rep: DNA photolyase-like protein
- Prochlorococcus marinus (strain AS9601)
Length = 384
Score = 48.0 bits (109), Expect = 5e-04
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 10/159 (6%)
Query: 241 PNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGT 300
PN+ E S + LSP+I+H LS + +K + T + ++ WR Y G
Sbjct: 32 PNN-ESSVSKLSPFITHRILSEYDLIHDIKSKYKIKNST----KFVEEIFWR--VYWKGW 84
Query: 301 GVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMV 360
+ N K+ N I + + A G T F ++ + +LKQ ++H+ R
Sbjct: 85 -MENRPKVWRNFISENNLDFDYELYENA-INGNTELDFFNSWVHELKQYNYLHNHTRMWF 142
Query: 361 ACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWL 399
A +L + W+ GAK F YL D D S N +W W+
Sbjct: 143 ASTWIF-NLGLPWQLGAKFFFKYLFDGDASSNLLSWRWV 180
>UniRef50_Q1W7G4 Cluster: DNA photolyase protein; n=22;
Magnoliophyta|Rep: DNA photolyase protein - Solanum
lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 189
Score = 47.6 bits (108), Expect = 7e-04
Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 14/196 (7%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIK-------DKVGINRLRFLLQS 62
WFR DLR+HDN +N A N + +Y DP DK G R FL+ S
Sbjct: 1 WFRNDLRVHDN----ECLNAAHNESMSVLAVYCFDPRDYGKSSSGFDKTGPYRASFLIDS 56
Query: 63 LEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAE 122
+ + L V GK +L +L + + ++ + V+ ++ I+ + +
Sbjct: 57 VADLRKNLQARGSDLVVRIGKPETVLVELAKAVGAEAVYAHREVSHDEVKGEDKIDAVMK 116
Query: 123 KKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKP 182
+G+ + T+Y V L +P Y F V+ + V++ IE + L P
Sbjct: 117 DEGLEVKYFWGSTLYHVDD-LPFKLEQMPTNYGGFREKVQGLEVRKTIEALDQLRG--LP 173
Query: 183 IDIQSENYSIPNLKEL 198
E IP+L +L
Sbjct: 174 ARGDVEPGEIPSLVDL 189
>UniRef50_Q652J5 Cluster: Deoxyribodipyrimidine photolyase family
protein-like; n=3; Oryza sativa|Rep:
Deoxyribodipyrimidine photolyase family protein-like -
Oryza sativa subsp. japonica (Rice)
Length = 695
Score = 46.8 bits (106), Expect = 0.001
Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 11/191 (5%)
Query: 10 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXXXXX 69
WF+ DLR+ D+ L A+ AE R+ +L P+Y D I D L LL +LE
Sbjct: 49 WFKHDLRVDDHPGLAAAV-AAEPRRPVL-PLYVFDRRILDGYSDTMLELLLFALEDLKMV 106
Query: 70 XXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFIN 129
+ L + G A D++ KL ++ Q + + +++ +E
Sbjct: 107 LKSQESDLLIGLGNAEDVVLKLVNEVQAGLIFTEEEVEYRVRNVLASVESSLSNASFLSG 166
Query: 130 KRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKP-IDIQSE 188
+ V+ +N + ++ +FL KE + ++ L++ P ++I+ E
Sbjct: 167 NPPEIVVWSASLYDYKNPRELSTSHNQFL--------KEKLPMNTPLAAPSLPALNIEIE 218
Query: 189 NYSIPNLKELQ 199
S+P L+EL+
Sbjct: 219 TGSLPTLEELK 229
>UniRef50_Q4FNW5 Cluster: Deoxyribodipyrimidine photolyase-related
protein; n=2; Candidatus Pelagibacter ubique|Rep:
Deoxyribodipyrimidine photolyase-related protein -
Pelagibacter ubique
Length = 496
Score = 46.4 bits (105), Expect = 0.002
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 13/116 (11%)
Query: 249 TVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLM----WREFYYTAGTGVAN 304
+ LSPYI+ G ++ ++ K+ E ++H + SL G + WREF G +
Sbjct: 264 SALSPYINLGLITPEIIIQKILEFH--KKHKIRMNSLEGYIRQIIGWREFMRGIYQGYS- 320
Query: 305 FDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMV 360
D+M + K+W EG TG P +D ++ GW HH+ R M+
Sbjct: 321 -DEMETKNF-----FNHERKMKKSWYEGTTGLPPLDHAIKNAVNHGWSHHIERLMI 370
>UniRef50_Q8N7D9 Cluster: CDNA FLJ25749 fis, clone TST06111, highly
similar to Homo sapiens photolyase; n=2; Homo
sapiens|Rep: CDNA FLJ25749 fis, clone TST06111, highly
similar to Homo sapiens photolyase - Homo sapiens
(Human)
Length = 194
Score = 46.4 bits (105), Expect = 0.002
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 404 FFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYP 439
FF +F Y PV FG++TD G YI++Y+P L+ +P
Sbjct: 13 FFNSFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFP 48
>UniRef50_Q0FFE9 Cluster: DNA photolyase-like protein; n=1; alpha
proteobacterium HTCC2255|Rep: DNA photolyase-like
protein - alpha proteobacterium HTCC2255
Length = 418
Score = 45.2 bits (102), Expect = 0.003
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 236 KPNSSPNSIEP-STTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREF 294
K N +SIE S + LSP+I H ++ + ++ + N QH+ + + ++ WR +
Sbjct: 44 KRNFDFSSIEKNSVSALSPWIKHRLITEEEVIIEILKYHN--QHSA--MKFIQEVFWRGY 99
Query: 295 Y-----YTAGTGVANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQE 349
+ + DK++ ++ ++++ A G+TG D QLK
Sbjct: 100 FKGWLEQHPTVWSHHNDKLIKEYAKLENNRFVKESYMSA-VNGETGIECFDFWCEQLKST 158
Query: 350 GWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS 400
G++H+ R A L + E GA F +L+D D + N +W W+S
Sbjct: 159 GYLHNHVRMWFASIWVF-TLKLPMELGADFFMLHLIDADAASNTLSWRWVS 208
>UniRef50_A3JVT0 Cluster: DNA photolyase-like protein; n=1;
Rhodobacterales bacterium HTCC2150|Rep: DNA
photolyase-like protein - Rhodobacterales bacterium
HTCC2150
Length = 407
Score = 44.8 bits (101), Expect = 0.005
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 331 EGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWS 390
EG+TG D R+L + G++H+ AR A L + WE GA F ++L+D D +
Sbjct: 131 EGRTGIACFDHWCRELVETGYLHNHARMWFASIWIF-TLRLPWELGADFFLNHLIDGDSA 189
Query: 391 LNAGNWMWL 399
N +W W+
Sbjct: 190 SNTLSWRWV 198
>UniRef50_A3WEJ7 Cluster: DNA photolyase-like protein; n=2;
Erythrobacter|Rep: DNA photolyase-like protein -
Erythrobacter sp. NAP1
Length = 412
Score = 44.0 bits (99), Expect = 0.008
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 15/157 (9%)
Query: 251 LSPYISHGCLSAK-LFYYKLKEVENGRQHTLPPVSLMGQLMWREF---YYTAGTGVANFD 306
LSP++ G LS + + L E G+ + ++ WR + Y V +
Sbjct: 47 LSPWLHAGLLSEREVILAALNEHGPGKAE-----KFIAEVFWRVYFKGYLEQRPSVWDAY 101
Query: 307 KMVGNAICIQIPWTKNDAFLKAWAE---GKTGYPFVDAIMRQLKQEGWIHHLARHMVACF 363
K + I + N K + E G+TG D +R+L Q G++H+ AR A
Sbjct: 102 KQGRDGALIAVE--NNSGLAKVYEEAVAGRTGIEAFDQWVRELVQTGYLHNHARMWFASV 159
Query: 364 LTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLS 400
L + W+ GA F +L+D D + N +W W++
Sbjct: 160 WIF-TLKLDWQLGADFFLRHLMDGDAASNTLSWRWVA 195
>UniRef50_A3VN66 Cluster: DNA photolyase-like protein; n=1;
Parvularcula bermudensis HTCC2503|Rep: DNA
photolyase-like protein - Parvularcula bermudensis
HTCC2503
Length = 424
Score = 43.6 bits (98), Expect = 0.011
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 327 KAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLD 386
+A EG+TG DA ++L G++H+ AR A L + W GA F +LLD
Sbjct: 138 QAAVEGRTGIDGFDAWTKELIATGYLHNHARMWFASIWIF-TLRLPWSLGADFFHRHLLD 196
Query: 387 YDWSLNAGNWMWL 399
D + N +W W+
Sbjct: 197 GDAASNTLSWRWV 209
>UniRef50_Q4FNX0 Cluster: DNA photolyase-like protein; n=2;
Candidatus Pelagibacter ubique|Rep: DNA photolyase-like
protein - Pelagibacter ubique
Length = 380
Score = 42.3 bits (95), Expect = 0.024
Identities = 39/193 (20%), Positives = 84/193 (43%), Gaps = 9/193 (4%)
Query: 210 YHGGETEALKRLNLYMSKK-EWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSA-KLFYY 267
+ +A+ +LN ++ + K + P++ + + LSPYI+HG ++ ++
Sbjct: 3 FEASRAKAVDKLNTFVEQNLSDYSKLRNFDFGPSN-RSNVSCLSPYITHGIINELEVINK 61
Query: 268 KLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANFDKMVGNAICIQIPWTKNDAFLK 327
LK+ ++ + W+ + +++ + I+ + N ++L
Sbjct: 62 SLKKFSFANNEKFIQ-EVLWHVYWKGWLELRPDVWSDYLIELDK---IKKEFKNNQSYLD 117
Query: 328 AWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDY 387
A EGKT + + +LK+ ++H+ R A L + W+ GA+ F +L D
Sbjct: 118 A-TEGKTNVDCFNQWVSELKENNYLHNHTRMWFASIWIF-TLELPWQLGAEFFMQHLYDG 175
Query: 388 DWSLNAGNWMWLS 400
D + N W W++
Sbjct: 176 DAASNTLGWRWVA 188
>UniRef50_Q1GLX4 Cluster: DNA photolyase-like protein; n=3;
Alphaproteobacteria|Rep: DNA photolyase-like protein -
Silicibacter sp. (strain TM1040)
Length = 410
Score = 42.3 bits (95), Expect = 0.024
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 332 GKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSL 391
G+TG + D ++L + G++H+ AR A L L + W GA F +LLD D +
Sbjct: 131 GETGLAYFDTWAKELVRTGYLHNHARMWFAS-LWIFTLKLPWRLGADFFLRHLLDGDPAS 189
Query: 392 NAGNWMWLS 400
N +W W++
Sbjct: 190 NTCSWRWVA 198
>UniRef50_Q9EN23 Cluster: AMV025; n=1; Amsacta moorei entomopoxvirus
'L'|Rep: AMV025 - Amsacta moorei entomopoxvirus (AmEPV)
Length = 453
Score = 40.7 bits (91), Expect = 0.075
Identities = 57/266 (21%), Positives = 119/266 (44%), Gaps = 26/266 (9%)
Query: 14 DLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXXXXXXXXX 73
DLR++DN + + N A + +Y ++ N + + I + +FL + L
Sbjct: 31 DLRVYDNWSFLYSQNIAYLNNSSMYVLYLINKN--NNINIRQYKFLYEGLPEFESQCKKC 88
Query: 74 XTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQ 133
++L +++ + +++ ++ ++ P + Y++ + KK +N V
Sbjct: 89 NVSFHLLSYNN-NIISNFINKYKIGHVI--IEQMPLLFHKKYYLDPL--KK---LNVNVY 140
Query: 134 HTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEP--IEISNVLSSHCKPIDIQSENYS 191
+ D H ++ + Y +K +K+ IE V S+ +PI +++
Sbjct: 141 --IVDSHNIIPVWVTSDKQEYNARTIRIKINKLKDQYLIEFPKVKISNIQPIFVENNFDI 198
Query: 192 IPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVL 251
IPN D++ + + GG T + R+N + K K +K N PN +T++L
Sbjct: 199 IPNY-----DKKLINIYEIVGGYTNGINRMNNFFKNKINTYKDKKNN--PNY--ENTSIL 249
Query: 252 SPYISHGCLSAK---LFYYKLKEVEN 274
SP++ G +SA+ L KLK++++
Sbjct: 250 SPWLHCGMISAQRCVLEANKLKKIKD 275
>UniRef50_A3UGV6 Cluster: DNA photolyase-like protein; n=1;
Oceanicaulis alexandrii HTCC2633|Rep: DNA
photolyase-like protein - Oceanicaulis alexandrii
HTCC2633
Length = 414
Score = 40.7 bits (91), Expect = 0.075
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 327 KAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLD 386
+A EG+TG DA +L Q G++H+ AR A + L + W GA F +L+D
Sbjct: 130 EAAIEGRTGLEGFDAWATELMQTGYLHNHARMWFAS-IWIFTLDLPWVLGADHFLRHLID 188
Query: 387 YDWSLNAGNWMWL 399
D + N +W W+
Sbjct: 189 GDAASNTLSWRWV 201
>UniRef50_Q28NI6 Cluster: DNA photolyase-like protein; n=6;
Rhodobacteraceae|Rep: DNA photolyase-like protein -
Jannaschia sp. (strain CCS1)
Length = 403
Score = 40.3 bits (90), Expect = 0.099
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 332 GKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSL 391
G+T +A R+L + G++H+ AR A L + W+ GA F +LLD D +
Sbjct: 118 GQTDIDAFNAWTRELVETGYLHNHARMWFASIWIF-TLGLPWQAGADFFMRHLLDGDPAS 176
Query: 392 NAGNWMWLSASAFFYKYF 409
N +W W++ K++
Sbjct: 177 NTLSWRWVAGLQTHGKHY 194
>UniRef50_A5FW57 Cluster: Deoxyribodipyrimidine photolyase-like
protein; n=1; Acidiphilium cryptum JF-5|Rep:
Deoxyribodipyrimidine photolyase-like protein -
Acidiphilium cryptum (strain JF-5)
Length = 396
Score = 39.9 bits (89), Expect = 0.13
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 324 AFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDY 383
AF A A G+TG D+ R++ ++H+ AR A L + WE GA F +
Sbjct: 122 AFHDACA-GQTGIDCFDSWAREIVARNYLHNHARMWFASIWIF-TLRLPWELGADFFLRH 179
Query: 384 LLDYDWSLNAGNWMWLS 400
LLD D + N +W W++
Sbjct: 180 LLDGDIASNTLSWRWVA 196
>UniRef50_Q2FRR1 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Methanospirillum hungatei JF-1|Rep:
Deoxyribodipyrimidine photolyase - Methanospirillum
hungatei (strain JF-1 / DSM 864)
Length = 448
Score = 39.9 bits (89), Expect = 0.13
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 7 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXX 66
+++W + +R N AL AI + K L ++ LD + + ++ RFL + L+
Sbjct: 20 ILYWMQSAVRTRYNHALEYAIERSNELKKPLIVVFCLDHSYPEATPVH-YRFLWEGLQDV 78
Query: 67 XXXXXXXXTCLYVLRGKAVDLLPKLFDD 94
+L G VD++P++ DD
Sbjct: 79 NRSLTERGIGFQILSGSPVDIIPRIADD 106
>UniRef50_Q98RW5 Cluster: Putative uncharacterized protein orf272;
n=1; Guillardia theta|Rep: Putative uncharacterized
protein orf272 - Guillardia theta (Cryptomonas phi)
Length = 272
Score = 39.1 bits (87), Expect = 0.23
Identities = 33/151 (21%), Positives = 66/151 (43%), Gaps = 10/151 (6%)
Query: 2 SKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQ 61
S + +I WFR DLRI+DN + + + N + L +Y D N +L FL Q
Sbjct: 62 SYSEKIILWFRYDLRINDNKLIE--LLKTNNNDYYL--VYCFDKNEIKNYSKKKLTFLKQ 117
Query: 62 SLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIA 121
S+E L ++ G ++ + L + + + ++ + + + E+ E I
Sbjct: 118 SVETLRDNLRKLEYNLMIMEGDSISVFKNLKEKFLITKISYSSRSNKKNDLEKEF-EIIK 176
Query: 122 EKKGV-----FINKRVQHTVYDVHKVLRENN 147
+ K + IN +++ +++ +NN
Sbjct: 177 KLKTIGLNVNLINNKIEFNLHNEFNYFNKNN 207
>UniRef50_Q947B2 Cluster: Cryptochrome 2; n=3; Hordeum vulgare|Rep:
Cryptochrome 2 - Hordeum vulgare (Barley)
Length = 61
Score = 38.7 bits (86), Expect = 0.30
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 382 DYLLDYDWSLNAGNWMWLSASA-FFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPR 440
D LLD D + W ++S ++ R+ +P GQK D +G Y++ ++PEL + P
Sbjct: 1 DVLLDADRESDILGWQYISGCLPDGHELGRLDNPEVQGQKYDPDGEYVRTWIPELARMPG 60
Query: 441 E 441
E
Sbjct: 61 E 61
>UniRef50_Q947B4 Cluster: Cryptochrome 1a; n=7; Poaceae|Rep:
Cryptochrome 1a - Hordeum vulgare (Barley)
Length = 61
Score = 37.9 bits (84), Expect = 0.53
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 382 DYLLDYDWSLNAGNWMWLSASAFFYKYF-RVYSPVAFGQKTDKEGVYIKKYVPELKKYPR 440
D LLD D +A W ++S S + + +P G K D G Y+++++PEL + P
Sbjct: 1 DTLLDADLESDALGWQYISGSLPDSRELDHIDNPQLEGYKFDPHGEYVRRWLPELARLPT 60
Query: 441 E 441
E
Sbjct: 61 E 61
>UniRef50_UPI00015C60C8 Cluster: hypothetical protein CKO_03947;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_03947 - Citrobacter koseri ATCC BAA-895
Length = 317
Score = 37.1 bits (82), Expect = 0.92
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 8/114 (7%)
Query: 99 YLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFL 158
+LT D +F+ QD Y+ + E G+++NK + N+ P+T QK++
Sbjct: 149 FLTTYPDSVVKFMSQDMYVSESGEILGLYVNKITLEQLESF-----SNDSENPITLQKYV 203
Query: 159 SL---VKSINVKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVK 209
+ V+ +++ + S H + Y IPN +ID T K
Sbjct: 204 NKKFEVRYTVIEDKHFACAIDSQHSNKAKVDWRRYDIPNTPHWKIDAPTAVKEK 257
>UniRef50_Q95UQ7 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Branchiostoma belcheri|Rep: Deoxyribodipyrimidine
photo-lyase - Branchiostoma belcheri (Amphioxus)
Length = 202
Score = 37.1 bits (82), Expect = 0.92
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 7 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXX 66
+++W D R+ DN AL A A + L + L P + I F+L+ LE
Sbjct: 121 IVYWMSRDQRVQDNWALLYAQQLAMKHQVPLYVCFCLVPKFLE-ASIRHYGFMLKGLEEV 179
Query: 67 XXXXXXXXTCLYVLRGKAVDLLP 89
++L G AVD+LP
Sbjct: 180 ERELQSLDISFHLLTGYAVDVLP 202
>UniRef50_Q8PYK9 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Methanosarcina|Rep: Deoxyribodipyrimidine photolyase -
Methanosarcina mazei (Methanosarcina frisia)
Length = 464
Score = 37.1 bits (82), Expect = 0.92
Identities = 66/366 (18%), Positives = 141/366 (38%), Gaps = 23/366 (6%)
Query: 7 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXX 66
V++W D R DN AL + A+ + ++ L + GI + F+L+ L+
Sbjct: 21 VVYWMSRDQRAEDNWALLFSRAIAKEANVPVVVVFCLTDEFLE-AGIRQYEFMLKGLQEL 79
Query: 67 XXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGV 126
+ LRG + + + D+ T D P + ++++IE + +
Sbjct: 80 EVSLSRKKIPSFFLRGDPGEKISRFVKDYNAG--TLVTDFSPLRI-KNQWIEKVISGISI 136
Query: 127 FINKRVQHTVYDVHKVLRENNGAV----PLTYQKFLSLVKSINVKEPIEISNVLSSHCKP 182
+ H V + +++ A P Y ++ EP ++ LS+
Sbjct: 137 PFFEVDAHNVVPCWEASQKHEYAAHTFRPKLYALLPEFLEEFPELEPNSVTPELSAGAGM 196
Query: 183 IDIQSE------NYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEK 236
++ S+ +P L+ + P + GE A K + +++ + + +
Sbjct: 197 VETLSDVLETGVKALLPERALLKNKDPLFEPWHFEPGEKAAKKVMESFIADR--LDSYGA 254
Query: 237 PNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKEVEN---GRQHTLPPVSLMGQLMWRE 293
+ P S LSPY+ G +S++ ++++ E+ ++ L + + ++
Sbjct: 255 LRNDPTKNMLSN--LSPYLHFGQISSQRVVLEVEKAESNPGSKKAFLDEILIWKEISDNF 312
Query: 294 FYYTAG-TGVANFDKMVGNAICIQIPWTKNDAF-LKAWAEGKTGYPFVDAIMRQLKQEGW 351
YY G G +F ++ ++ + L+ + GKT P +A +L G
Sbjct: 313 CYYNPGYDGFESFPSWAKESLNAHRNDVRSHIYTLEEFEAGKTHDPLWNASQMELLSTGK 372
Query: 352 IHHLAR 357
+H R
Sbjct: 373 MHGYMR 378
>UniRef50_A0DF13 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 647
Score = 36.3 bits (80), Expect = 1.6
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 108 PEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVK 167
P+ +Q+ E +E++ + + + + +++ H V +N P YQ +L+K +NVK
Sbjct: 25 PQQIQKQEQVEEMTDDEEISEQQNEDDQIFE-HVVDFKNTNEKPSHYQ---NLLKKLNVK 80
Query: 168 EPIEISNVLSSHCKPIDIQSENYSI 192
+ N SS ++I+ EN S+
Sbjct: 81 QQQADDNYGSSESARLNIKQENKSV 105
>UniRef50_UPI00006CFDC9 Cluster: Myb-like DNA-binding domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Myb-like DNA-binding domain containing
protein - Tetrahymena thermophila SB210
Length = 991
Score = 35.9 bits (79), Expect = 2.1
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 89 PKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG---VFINKRVQHTVYDVHKVLRE 145
P LF D++ K+ ++ + E QQD+ + + +K +F+N +++ + H+++ E
Sbjct: 553 PTLFSDFE-KFQKIRISENEELEQQDQKSNEKSNQKKAQKIFMNPKIEEEEEEEHQIICE 611
Query: 146 NNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETL 205
N QK +S K+ +E N + P I S+N I ++ D T
Sbjct: 612 KNEKPSEAQQKIIS-------KQEVEQDNHENYADSP--IISQNNLIRANEDQDSDSNTE 662
Query: 206 APVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSP 253
A G + + LNL +S+ KF K + I+P +SP
Sbjct: 663 A------GRMKR-QMLNLQVSQNSSFNKFRKDEYGNSIIKPQKLPISP 703
>UniRef50_A2FJY4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1110
Score = 35.9 bits (79), Expect = 2.1
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 92 FDDWQVKYLTCQVDIDPE--FVQQD-EYIEDIAEKKGVFINKRVQHTVY--DVHKVLREN 146
F+DWQ KYL D + E F D E+I+ K G + R + Y D++K++ +
Sbjct: 429 FEDWQKKYLNIDEDEEEESSFSDDDIEFIDTETSKSGKKLTPREKELQYFRDINKIVEKQ 488
Query: 147 NGAVPLTYQK 156
N T QK
Sbjct: 489 NQRKKQTKQK 498
>UniRef50_Q5UUY8 Cluster: Class-II photolyase; n=1; Antonospora
locustae|Rep: Class-II photolyase - Antonospora locustae
(Nosema locustae)
Length = 528
Score = 35.9 bits (79), Expect = 2.1
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Query: 7 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXX 66
V++W D R+ DN AL A A L + L P D + RF+L L
Sbjct: 97 VVYWMSRDQRVQDNWALLCAQGIAVRHGLPLFICFCLVPRFLDAT-TRQFRFMLAGLREV 155
Query: 67 XXXXXXXXTCLYVLRGKAVDLLPKLFDDWQV 97
+VL+G A + LP+ + ++
Sbjct: 156 ETEALQLGIAFHVLKGSAPEALPRFVEHHKI 186
>UniRef50_UPI00006CBB71 Cluster: hypothetical protein
TTHERM_00565620; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00565620 - Tetrahymena
thermophila SB210
Length = 852
Score = 35.5 bits (78), Expect = 2.8
Identities = 33/147 (22%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Query: 137 YDVHKVLRENNGAVPLTYQKFLSLVKSIN------VKEPIEISNVLSSH--CKPIDIQSE 188
+D++K+ E A + FLS SIN +K+ I I LS C+P +
Sbjct: 258 FDINKLTLEQFSAYQFSRNPFLSK-DSINFEQSSLIKKAIPIEKCLSYKFLCEPCFELAN 316
Query: 189 NYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPN---SIE 245
N S +++ +Q ++ + KYH + + + ++K+ + + ++ + N I+
Sbjct: 317 NLSQDSIQSVQNEQTIKSKSKYHKIQKSVNQIADCQTTEKKLIYESDQNDEEQNYYQKIQ 376
Query: 246 PSTTVLSPYISHGCLSAKLFYYKLKEV 272
+ LS + +G + + F+ KL+E+
Sbjct: 377 SIRSKLSCFCQNGMVGEEEFFKKLEEI 403
>UniRef50_Q9KR11 Cluster: Protein tolB precursor; n=59;
Proteobacteria|Rep: Protein tolB precursor - Vibrio
cholerae
Length = 450
Score = 35.5 bits (78), Expect = 2.8
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 201 DEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTT---VLSPYISH 257
D +TLA V + G+ E + +N+Y K+E + F + N +P T VLS +
Sbjct: 230 DGQTLAYVSFQNGQAE-IYMMNIYSGKREKLTSFPRHNGAPRFSPDGKTLALVLSKTGNL 288
Query: 258 GCLSAKLFYYKLKEVENGRQHTLPP 282
+ L +L EV +GR + P
Sbjct: 289 QVYTMDLATRRLTEVTSGRSNNTEP 313
>UniRef50_A7B5Z5 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 284
Score = 34.7 bits (76), Expect = 4.9
Identities = 23/103 (22%), Positives = 45/103 (43%)
Query: 209 KYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYK 268
KY + +ALK++N + K E+ C + +++ S L P+ G +S ++
Sbjct: 14 KYRQTKRKALKKINFQVKKGEFFCIIGANGAGKSTLCNSLVGLIPHYFVGKMSGEVLVSG 73
Query: 269 LKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVANFDKMVGN 311
+ ++ + L+ Q + + YTAGT +GN
Sbjct: 74 ARVSDSSISDLSAQIGLVFQNPFNQLSYTAGTVAEELAYGLGN 116
>UniRef50_Q5ZW53 Cluster: Putative uncharacterized protein; n=2;
Proteobacteria|Rep: Putative uncharacterized protein -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 399
Score = 34.3 bits (75), Expect = 6.5
Identities = 28/142 (19%), Positives = 57/142 (40%), Gaps = 6/142 (4%)
Query: 111 VQQDEYIEDIAEKKGVFINKRV-QHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEP 169
++ ++ + I KG FI +H +D+H R+ N + + + + + + P
Sbjct: 64 MEDGDWPDSIDTSKGQFIYYGDNKHPGHDIHDTPRQGNATLKMLFDSTHNEKDARRIVPP 123
Query: 170 IEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKR-----LNLY 224
I I + +Q + ++P L ++ +A K G+ R LN+
Sbjct: 124 IFIFVKYPTASSSRSVQFKGVAVPGYPGLSATDDLIAVWKTTNGQRFQNYRAIFTILNIP 183
Query: 225 MSKKEWVCKFEKPNSSPNSIEP 246
M ++W+ P NS+ P
Sbjct: 184 MVSRKWINSLFDPFGQDNSLNP 205
>UniRef50_A6WFC1 Cluster: Deoxyribodipyrimidine photolyase-like
protein; n=1; Kineococcus radiotolerans SRS30216|Rep:
Deoxyribodipyrimidine photolyase-like protein -
Kineococcus radiotolerans SRS30216
Length = 371
Score = 34.3 bits (75), Expect = 6.5
Identities = 37/153 (24%), Positives = 57/153 (37%), Gaps = 18/153 (11%)
Query: 249 TVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREF--YYTAGTGVANFD 306
T LSPY+ HG L + G +L+W+E+ + A G A
Sbjct: 41 TRLSPYVRHGLLPLPTVW-----AAAGDAPARDRAKFRDELLWQEYARHLYARLGPATAR 95
Query: 307 KMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVAC-FLT 365
+ A PW + + W + V +L +EGW+ + R +A +
Sbjct: 96 PLRFAAPVPAQPWER-----EPWPQDMA---CVATTTAELHEEGWLVNQTRMWLASQYSV 147
Query: 366 RGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMW 398
R W EGA+ +LLD + N W W
Sbjct: 148 RAGA--DWREGAREMYRHLLDGSPAANRLGWQW 178
>UniRef50_A6Q939 Cluster: Flagellar biosynthesis protein FlhF; n=1;
Sulfurovum sp. NBC37-1|Rep: Flagellar biosynthesis
protein FlhF - Sulfurovum sp. (strain NBC37-1)
Length = 362
Score = 34.3 bits (75), Expect = 6.5
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 137 YDVHKVLRENNGAVPLTYQKFLSLVKSINVKEP--IEISNVLSSHCKPIDIQS--ENYSI 192
YD+ +L + G P QKF+ ++ +N K P IE++ VL++ K D++ EN+S
Sbjct: 242 YDI--ILVDTAGMSPYDTQKFVKTIEFVNTKIPKKIEVALVLAATVKYEDMEDIHENFSF 299
Query: 193 PNLKELQIDE 202
NL + I +
Sbjct: 300 LNLDSVIISK 309
>UniRef50_Q241N9 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1042
Score = 34.3 bits (75), Expect = 6.5
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Query: 164 INVKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQ---IDEETLAPVKYHGGETEALKR 220
I VK+ I+ N + +H + ++ YS K L + P+ E A R
Sbjct: 149 IYVKDCIKELNEMIAHMTELRSNTKTYSYQKFKNLNQAFFENPECHPLLLQFLELSA-DR 207
Query: 221 LNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKL 269
L YM++++++ + N I+ VL + H L +FY+KL
Sbjct: 208 LLFYMNQEKFIVTDNQKNEFIKLIDDQIQVLQSFQQHEPLQNHIFYFKL 256
>UniRef50_Q9KDU5 Cluster: BH1116 protein; n=5; Bacteria|Rep: BH1116
protein - Bacillus halodurans
Length = 1063
Score = 33.9 bits (74), Expect = 8.6
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 247 STTVLSPYISHGCLSAKLFYYKLKEV-ENGRQHTLPPV-SLMGQLMWRE 293
+TT + Y H L+ LFYYK++ V E GR PV S + +M R+
Sbjct: 314 ATTTEASYTDHDVLTTDLFYYKIEAVNEGGRSKATDPVASPIAHVMLRQ 362
>UniRef50_Q8GFD6 Cluster: MobX; n=1; Enterococcus faecalis|Rep: MobX
- Enterococcus faecalis (Streptococcus faecalis)
Length = 224
Score = 33.9 bits (74), Expect = 8.6
Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 88 LPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQ---HTVYDVHKVLR 144
+P+L +W+ ++ T + D + + + E + +N+R+Q T+ +++L
Sbjct: 22 IPQLISEWEQQFQTLSTNFDKQQKHHQNELSEKIENELKHLNRRIQDQLDTLISQNQILH 81
Query: 145 ENNGAVPLTYQKFLSL-VKSIN 165
+N + Y+ +L VK IN
Sbjct: 82 HDNQVLLSDYENYLDKHVKEIN 103
>UniRef50_A6LRL4 Cluster: ATP-dependent protease; n=1; Clostridium
beijerinckii NCIMB 8052|Rep: ATP-dependent protease -
Clostridium beijerinckii NCIMB 8052
Length = 768
Score = 33.9 bits (74), Expect = 8.6
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 75 TCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDI--DPEFVQQDEYIEDIAEKKGVFINK 130
T L++ GK ++L ++ DD + KY C V+ ++++ IE+I+EK+ +I K
Sbjct: 94 TALFLPNGKG-NILKEMIDDIKEKYFECIVEFYNSSSDEEKEDIIEEISEKRNNYITK 150
>UniRef50_Q4VPF3 Cluster: Phantastica transcription factor b; n=1;
Lotus japonicus|Rep: Phantastica transcription factor b
- Lotus japonicus
Length = 341
Score = 33.9 bits (74), Expect = 8.6
Identities = 27/113 (23%), Positives = 43/113 (38%), Gaps = 5/113 (4%)
Query: 141 KVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQI 200
K+ E G K+ + K +E IEI+ ++S PI + + E +
Sbjct: 83 KIAAEVPGRTAKRLGKWWEVYKEKQQREKIEINGIVS----PISDTKYEHMLEGFAEKLV 138
Query: 201 DEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSP 253
E TL EA N W+ ++ ++ P+SI T LSP
Sbjct: 139 KEHTLPSFAMAASSNEAFLHTNSSAMLPSWLSNYDSTSTPPSSIS-VTLSLSP 190
>UniRef50_A0CC18 Cluster: Chromosome undetermined scaffold_166,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_166,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 887
Score = 33.9 bits (74), Expect = 8.6
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 122 EKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCK 181
+ KG + +V V D +KV +N G + +K + IN + I+I V+ + K
Sbjct: 577 KSKGKSLGTKVIILVEDQNKVEDQNRGYSIMISRKSVRFGTKINSQNKIQIGTVIVTSVK 636
Query: 182 PI-DIQSENYSIPNLKELQIDEETLA 206
P+ + Q+ + P K +++ + ++
Sbjct: 637 PVSNFQNNDVVTPQFKTIELQTDMIS 662
>UniRef50_Q8N387 Cluster: Mucin-15 precursor; n=17; Eutheria|Rep:
Mucin-15 precursor - Homo sapiens (Human)
Length = 334
Score = 33.9 bits (74), Expect = 8.6
Identities = 19/83 (22%), Positives = 38/83 (45%)
Query: 167 KEPIEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMS 226
KE I SN+ +SH P+++ + ++ I + E +L +K + + ++ ++S
Sbjct: 59 KENITTSNLKASHSPPLNLPNNSHGITDFSSNSSAEHSLGSLKPTSTISTSPPLIHSFVS 118
Query: 227 KKEWVCKFEKPNSSPNSIEPSTT 249
K W + P S P+ T
Sbjct: 119 KVPWNAPIADEDLLPISAHPNAT 141
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.321 0.138 0.431
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,382,710
Number of Sequences: 1657284
Number of extensions: 22425128
Number of successful extensions: 48608
Number of sequences better than 10.0: 241
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 47712
Number of HSP's gapped (non-prelim): 403
length of query: 441
length of database: 575,637,011
effective HSP length: 103
effective length of query: 338
effective length of database: 404,936,759
effective search space: 136868624542
effective search space used: 136868624542
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 74 (33.9 bits)
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