GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000221-TA|BGIBMGA000221-PA|IPR006050|DNA photolyase,
N-terminal, IPR005101|DNA photolyase, FAD-binding, IPR006051|DNA
photolyase, FAD- binding N-terminal
         (441 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...   435   e-123
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...   270   7e-74
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    26   1.8  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   7.2  
AJ973475-1|CAJ01522.1|  127|Anopheles gambiae hypothetical prote...    24   7.2  
AJ697728-1|CAG26921.1|  127|Anopheles gambiae putative sensory a...    24   7.2  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score =  435 bits (1071), Expect = e-123
 Identities = 200/438 (45%), Positives = 278/438 (63%), Gaps = 10/438 (2%)

Query: 8   IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQSLEX 65
           +HWFR  LR+HDN ALR  +  A       R ++ +DP       VGIN+ RFLLQ L+ 
Sbjct: 7   VHWFRKGLRLHDNPALREGLRGART----FRCVFIIDPWFAGSSNVGINKWRFLLQCLDD 62

Query: 66  XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 125
                    + L+V+RG+  D LPKLF +W    LT + D +P    +D  I ++ ++ G
Sbjct: 63  LDRNLRKLNSRLFVIRGQPADALPKLFKEWGTTCLTFEEDPEPFGRVRDHNISEMCKELG 122

Query: 126 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVL----SSHCK 181
           + +     HT+Y++ +++ +N G  PLTY +F +++ S++     E +  L    +++  
Sbjct: 123 IEVISAASHTLYNLERIIEKNGGRAPLTYHQFQAIIASMDAPPQPEAAITLDVIGNANTP 182

Query: 182 PIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSP 241
             D   + Y +P L+EL  + E L P  + GGETEAL RL  ++ +K WV  F +P  +P
Sbjct: 183 QYDDHDDKYGVPTLEELGFETEALRPPVWIGGETEALARLERHLERKAWVASFGRPKMTP 242

Query: 242 NSIEPSTTVLSPYISHGCLSAKLFYYKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTG 301
            S+  S T LSPY+  GCLS +LFYY+L ++    +   PP+SL GQL+WREF+Y A T 
Sbjct: 243 QSLLASQTGLSPYLRFGCLSTRLFYYQLTDLYKKIKKACPPLSLHGQLLWREFFYCAATK 302

Query: 302 VANFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVA 361
              FDKM GN IC+QIPW +N   L  WA G+TG+P++DAIM QL++EGWIHHLARH VA
Sbjct: 303 NPTFDKMAGNPICVQIPWDRNAEALAKWASGQTGFPWIDAIMTQLREEGWIHHLARHAVA 362

Query: 362 CFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKT 421
           CFLTRGDLWISWEEG K+FE+ LLD DWS+NAG WMWLS S+FF ++F  Y PV FG+K 
Sbjct: 363 CFLTRGDLWISWEEGMKVFEELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKA 422

Query: 422 DKEGVYIKKYVPELKKYP 439
           D  G YI++Y+P LK +P
Sbjct: 423 DPNGDYIRRYLPVLKNFP 440


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score =  270 bits (661), Expect = 7e-74
 Identities = 162/460 (35%), Positives = 250/460 (54%), Gaps = 27/460 (5%)

Query: 8   IHWFRLDLRIHDNLALRNAI-NEAENRKH---LLRPIYFLDPNIKDK--VGINRLRFLLQ 61
           I WFR  LR+HDN +L  A+ ++  N+      L PI+  D        VG NR++FLL+
Sbjct: 6   ILWFRHGLRLHDNPSLLEALKSDCVNQSSEAVKLFPIFIFDGESAGTRIVGYNRMKFLLE 65

Query: 62  SLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIA 121
           SL             L V RG +V +L +LF++  +K L  + D +P + ++D+ +  + 
Sbjct: 66  SLADLDRQFRDLGGQLLVFRGDSVTVLRRLFEELNIKKLCYEQDCEPIWKERDDAVAKLC 125

Query: 122 EKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI-NVKEPIEISNV--LSS 178
               V   + V HT+++  +V++ N    PLTYQ FL  V  I +   P+   N   +  
Sbjct: 126 RTMDVRCVENVSHTLWNPIEVIQTNGDIPPLTYQMFLHTVNIIGDPPRPVGAPNFEYVEF 185

Query: 179 HCKPIDIQSEN---YSIPNLKELQIDEETLAPV---KYHGGETEALKRLNLYMSKKEWVC 232
              P  + SE      +P   +  I  +  A +   K+ GGET AL+ L   + ++E   
Sbjct: 186 GRVPALLASELKLCQQMPAPDDFGIHYDGNARIAFQKWIGGETRALEALGARLKQEEEAF 245

Query: 233 K---FEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYYKLKE----VENGRQHTLPPVS- 284
           +   +    + P  + P+T+ +S  +  GCLS ++FY+ + +    V++  Q   P    
Sbjct: 246 REGYYLPTQAKPEILGPATS-MSAALRFGCLSVRMFYWCVHDLFAKVQSNSQFKYPGGHH 304

Query: 285 LMGQLMWREFYYTAGTGVANFDKMVGNAICIQIPWTK-NDAFLKAWAEGKTGYPFVDAIM 343
           + GQL+WRE++YT      ++ +M  N IC+ IPW K  D  L  W EG+TG+P +DA M
Sbjct: 305 ITGQLIWREYFYTMSVQNPHYGEMERNPICLNIPWYKPEDDSLTRWKEGRTGFPMIDAAM 364

Query: 344 RQLKQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASA 403
           RQL  EGW+HH+ R++ A FLTRG LW+SWEEG + F  YLLD DWS+ AGNWMW+S+SA
Sbjct: 365 RQLLAEGWLHHILRNITATFLTRGGLWLSWEEGLQHFLKYLLDADWSVCAGNWMWVSSSA 424

Query: 404 F--FYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPRE 441
           F       +   P+A  ++ D +G Y+K+Y+PEL  YP +
Sbjct: 425 FERLLDSSKCTCPIALARRLDPKGDYVKRYLPELANYPAQ 464


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 26.2 bits (55), Expect = 1.8
 Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 2/84 (2%)

Query: 131  RVQHTVYD-VHKVLRENNGAVPL-TYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQSE 188
            R+   + D  HK+LR     + + T Q    +V + NV +    + V  + C+P  IQ  
Sbjct: 1348 RIAELIADKYHKILRHAGAQLMINTMQLRFWIVGARNVAKRTVFNCVKCTRCRPKLIQQP 1407

Query: 189  NYSIPNLKELQIDEETLAPVKYHG 212
               +P  +  Q    +++ V Y G
Sbjct: 1408 MADLPEQRVRQARPFSISGVDYAG 1431


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.2 bits (50), Expect = 7.2
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 102 CQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQH 134
           C+ +I   F + DEY +++ ++  +F    V H
Sbjct: 422 CKNNIKIRFYELDEYDQEVWQEMAIFSEADVHH 454


>AJ973475-1|CAJ01522.1|  127|Anopheles gambiae hypothetical protein
           protein.
          Length = 127

 Score = 24.2 bits (50), Expect = 7.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 416 AFGQKTDKEGVYIKKYVPELKK 437
           A  +K D E +Y++KY  E KK
Sbjct: 100 ALQKKYDPENLYVEKYREEAKK 121


>AJ697728-1|CAG26921.1|  127|Anopheles gambiae putative sensory
           appendage protein SAP-2 protein.
          Length = 127

 Score = 24.2 bits (50), Expect = 7.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 416 AFGQKTDKEGVYIKKYVPELKK 437
           A  +K D E +Y++KY  E KK
Sbjct: 100 ALQKKYDPENLYVEKYREEAKK 121


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.138    0.431 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,256
Number of Sequences: 2123
Number of extensions: 19999
Number of successful extensions: 46
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 33
Number of HSP's gapped (non-prelim): 7
length of query: 441
length of database: 516,269
effective HSP length: 66
effective length of query: 375
effective length of database: 376,151
effective search space: 141056625
effective search space used: 141056625
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)