Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000221-TA|BGIBMGA000221-PA|IPR006050|DNA photolyase,
N-terminal, IPR005101|DNA photolyase, FAD-binding, IPR006051|DNA
photolyase, FAD- binding N-terminal
(441 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical pr... 31 2.1
AF106575-4|AAC78172.2| 548|Caenorhabditis elegans Hypothetical ... 31 2.1
Z78198-1|CAB01566.1| 107|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z46795-6|CAE48511.2| 838|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z46792-8|CAE48495.2| 838|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 30 3.7
AF016675-2|AAB66139.1| 357|Caenorhabditis elegans Hypothetical ... 29 4.9
Z81037-9|CAB02749.2| 425|Caenorhabditis elegans Hypothetical pr... 29 6.5
AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase ... 29 6.5
AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cut... 29 6.5
Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical pr... 29 8.6
Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical p... 29 8.6
Z71258-14|CAA95786.1| 920|Caenorhabditis elegans Hypothetical p... 29 8.6
AF408763-1|AAO27842.1| 459|Caenorhabditis elegans unknown prote... 29 8.6
>U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical
protein D1014.7 protein.
Length = 492
Score = 31.5 bits (68), Expect = 1.2
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 90 KLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGA 149
K F W T +DID +DE + I N ++ + + V V+++NN
Sbjct: 289 KFFSKW-----TALIDIDERIEMRDEKYKTIVNYLDTIKNLQIVNLHFKVQWVIKQNN-- 341
Query: 150 VPLTYQKFLSLVKSINVKEPIEISNV 175
P TY ++ +N + IS V
Sbjct: 342 TPATYVNDKQIIDEMNFHKYQNISQV 367
>Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical
protein M88.6b protein.
Length = 594
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/62 (24%), Positives = 32/62 (51%)
Query: 194 NLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSP 253
+L L +D ++ ++ E +KRL L+ +K ++ + + SP S+E L+P
Sbjct: 398 SLSSLALDHNVISKIEARALEGMEIKRLYLHSNKLNYLYQGTFDSFSPKSVEAVDVSLNP 457
Query: 254 YI 255
++
Sbjct: 458 WV 459
>Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical
protein M88.6a protein.
Length = 610
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/62 (24%), Positives = 32/62 (51%)
Query: 194 NLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSP 253
+L L +D ++ ++ E +KRL L+ +K ++ + + SP S+E L+P
Sbjct: 414 SLSSLALDHNVISKIEARALEGMEIKRLYLHSNKLNYLYQGTFDSFSPKSVEAVDVSLNP 473
Query: 254 YI 255
++
Sbjct: 474 WV 475
>AF106575-4|AAC78172.2| 548|Caenorhabditis elegans Hypothetical
protein K04F1.13 protein.
Length = 548
Score = 30.7 bits (66), Expect = 2.1
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 156 KFLSLVKSINVKEPIEISNVLSSHCKPIDIQSENYSI--PNLKELQIDEE-TLAPVKYHG 212
+FLS NVK PI + +P+ + N I N++E ++ EE T + VKY+G
Sbjct: 404 RFLSNSALKNVKFPIMKRPPFQINHEPVIEINGNLEIIFNNVQECKLHEEQTQSRVKYNG 463
Query: 213 GETEALKRLN 222
E +AL+ L+
Sbjct: 464 DECDALEELS 473
>Z78198-1|CAB01566.1| 107|Caenorhabditis elegans Hypothetical
protein F55C5.1 protein.
Length = 107
Score = 29.9 bits (64), Expect = 3.7
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 27 INEAENRKHLLRPIY-FLDPNIKDKVGINRL 56
+ + N + +RP+Y F+DP K K+ INR+
Sbjct: 34 VKSSNNEHYRVRPVYGFIDPKGKTKLDINRI 64
>Z46795-6|CAE48511.2| 838|Caenorhabditis elegans Hypothetical
protein C52A11.4b protein.
Length = 838
Score = 29.9 bits (64), Expect = 3.7
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 85 VDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLR 144
++ + ++ D K L+ Q PE + D AEK+ V I+KR++ + ++ K L+
Sbjct: 30 IERIERILKDPLFKQLSHQPTSSPETFKSDNRRNSAAEKRVVEISKRIESS--EIRKNLK 87
Query: 145 EN 146
+N
Sbjct: 88 QN 89
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical
protein C52A11.4a protein.
Length = 2393
Score = 29.9 bits (64), Expect = 3.7
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 85 VDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLR 144
++ + ++ D K L+ Q PE + D AEK+ V I+KR++ + ++ K L+
Sbjct: 30 IERIERILKDPLFKQLSHQPTSSPETFKSDNRRNSAAEKRVVEISKRIESS--EIRKNLK 87
Query: 145 EN 146
+N
Sbjct: 88 QN 89
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 29.9 bits (64), Expect = 3.7
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 85 VDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLR 144
++ + ++ D K L+ Q PE + D AEK+ V I+KR++ + ++ K L+
Sbjct: 128 IERIERILKDPLFKQLSHQPTSSPETFKSDNRRNSAAEKRVVEISKRIESS--EIRKNLK 185
Query: 145 EN 146
+N
Sbjct: 186 QN 187
>Z46792-8|CAE48495.2| 838|Caenorhabditis elegans Hypothetical
protein C52A11.4b protein.
Length = 838
Score = 29.9 bits (64), Expect = 3.7
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 85 VDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLR 144
++ + ++ D K L+ Q PE + D AEK+ V I+KR++ + ++ K L+
Sbjct: 30 IERIERILKDPLFKQLSHQPTSSPETFKSDNRRNSAAEKRVVEISKRIESS--EIRKNLK 87
Query: 145 EN 146
+N
Sbjct: 88 QN 89
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical
protein C52A11.4a protein.
Length = 2393
Score = 29.9 bits (64), Expect = 3.7
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 85 VDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLR 144
++ + ++ D K L+ Q PE + D AEK+ V I+KR++ + ++ K L+
Sbjct: 30 IERIERILKDPLFKQLSHQPTSSPETFKSDNRRNSAAEKRVVEISKRIESS--EIRKNLK 87
Query: 145 EN 146
+N
Sbjct: 88 QN 89
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 29.9 bits (64), Expect = 3.7
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 85 VDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLR 144
++ + ++ D K L+ Q PE + D AEK+ V I+KR++ + ++ K L+
Sbjct: 128 IERIERILKDPLFKQLSHQPTSSPETFKSDNRRNSAAEKRVVEISKRIESS--EIRKNLK 185
Query: 145 EN 146
+N
Sbjct: 186 QN 187
>AF016675-2|AAB66139.1| 357|Caenorhabditis elegans Hypothetical
protein T27B7.7 protein.
Length = 357
Score = 29.5 bits (63), Expect = 4.9
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 78 YVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPE---FVQQDEYIEDIAEKKGVFINKRVQH 134
+ + KA+ K F WQ +YL Q +D F ++ +++ + K G I + H
Sbjct: 74 FAFKIKALSFQNKFF--WQTRYLEKQDAVDHFMILFKNRNSFVQSVRIKNGRDIESFLYH 131
Query: 135 TVYDVHKVLRENNGAVPL 152
+ + K ENN V +
Sbjct: 132 LLLRMRKEQEENNCRVKI 149
>Z81037-9|CAB02749.2| 425|Caenorhabditis elegans Hypothetical
protein C17E4.1 protein.
Length = 425
Score = 29.1 bits (62), Expect = 6.5
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 149 AVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPV 208
A P ++K +L K + KE ++ S +Q+ + I N +ID E + V
Sbjct: 175 APPSVFEKKKAL-KEESKKEVLDGSAFEEIEGPSAPVQTGSKGIKNKMRWKIDVEVV-DV 232
Query: 209 KYHGGETEALKRLNLYMSK-KEWVCKFEKPNSSPNSIEPSTT 249
K TE +++ ++ ++ K CKF K N S +TT
Sbjct: 233 KGDQRMTEIIEKASILRTRIKARKCKFSKENEKDTSTTTTTT 274
>AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase
protein.
Length = 1497
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 96 QVKYLTCQVDIDPEFVQQD--EYIEDIAEKKGVFINKRVQHTVY-DVHKVLRENNGAVPL 152
Q + C ++ + +++D E ++ + + GV I + VQ ++ +V +N A L
Sbjct: 859 QTLFKMCDLEGKNKVLRKDLAELVKSLNQTAGVHITESVQLRLFNEVLHYAGVSNDAKYL 918
Query: 153 TYQKFLSLVKSINVKEPI 170
TY F +L I K+P+
Sbjct: 919 TYDDFNALFSDIPDKQPV 936
>AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered
cuticle protein 3 protein.
Length = 1497
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 96 QVKYLTCQVDIDPEFVQQD--EYIEDIAEKKGVFINKRVQHTVY-DVHKVLRENNGAVPL 152
Q + C ++ + +++D E ++ + + GV I + VQ ++ +V +N A L
Sbjct: 859 QTLFKMCDLEGKNKVLRKDLAELVKSLNQTAGVHITESVQLRLFNEVLHYAGVSNDAKYL 918
Query: 153 TYQKFLSLVKSINVKEPI 170
TY F +L I K+P+
Sbjct: 919 TYDDFNALFSDIPDKQPV 936
>Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 28.7 bits (61), Expect = 8.6
Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 238 NSSPNSIEP-STTVLSPYISHGCLSAKLFYYKLKEVENGR 276
NS+PN IE S V+ G LSA Y KLKE EN R
Sbjct: 663 NSTPNFIEMISAEVVMGKYPKGLLSAWDSYDKLKESENTR 702
>Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 28.7 bits (61), Expect = 8.6
Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 238 NSSPNSIEP-STTVLSPYISHGCLSAKLFYYKLKEVENGR 276
NS+PN IE S V+ G LSA Y KLKE EN R
Sbjct: 663 NSTPNFIEMISAEVVMGKYPKGLLSAWDSYDKLKESENTR 702
>Z71258-14|CAA95786.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 28.7 bits (61), Expect = 8.6
Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 238 NSSPNSIEP-STTVLSPYISHGCLSAKLFYYKLKEVENGR 276
NS+PN IE S V+ G LSA Y KLKE EN R
Sbjct: 663 NSTPNFIEMISAEVVMGKYPKGLLSAWDSYDKLKESENTR 702
>AF408763-1|AAO27842.1| 459|Caenorhabditis elegans unknown protein
protein.
Length = 459
Score = 28.7 bits (61), Expect = 8.6
Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 238 NSSPNSIEP-STTVLSPYISHGCLSAKLFYYKLKEVENGR 276
NS+PN IE S V+ G LSA Y KLKE EN R
Sbjct: 371 NSTPNFIEMISAEVVMGKYPKGLLSAWDSYDKLKESENTR 410
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.138 0.431
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,717,319
Number of Sequences: 27539
Number of extensions: 516447
Number of successful extensions: 1094
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1092
Number of HSP's gapped (non-prelim): 19
length of query: 441
length of database: 12,573,161
effective HSP length: 84
effective length of query: 357
effective length of database: 10,259,885
effective search space: 3662778945
effective search space used: 3662778945
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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