Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000220-TA|BGIBMGA000220-PA|IPR003439|ABC transporter
related, IPR013525|ABC-2 type transporter
(823 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 132 1e-32
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 132 1e-32
AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 24 3.7
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 24 3.7
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 24 3.7
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 6.4
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 23 6.4
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 23 6.4
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 132 bits (318), Expect = 1e-32
Identities = 76/234 (32%), Positives = 129/234 (55%), Gaps = 12/234 (5%)
Query: 230 GEILAVLATAQHEATGLLDVLA---GVRKKLSGDIVINGQPVASSTLRKVVAYVRNDTAL 286
GE+LA+L ++ T LL+ L +SG +NG PV+S TL AYV+ D
Sbjct: 104 GELLAILGSSGAGKTTLLNTLTFHTSSNLTVSGLRCVNGIPVSSKTLASQSAYVQQDDLF 163
Query: 287 CPTMSVEHTLRFHAALRKPRNTHSHVKMGDRDRINLLIEELGLEQVRDTNVGRLTR---- 342
T++V+ L F A LR R+ +M R+ +I +L L + ++T +G L R
Sbjct: 164 IGTLTVKEHLIFQALLRMDRDISYSQRMA---RVEEVISDLALSKCQNTPIGILGRIKGI 220
Query: 343 --SEIRRLNVACQLLLDMAILILDQPTKEMDIFDTFFLVEYLRNWASTGRVVIMSLHPPT 400
E +RL+ A ++L + ++ D+PT +D F +++ L+ A TG+ VI ++H P+
Sbjct: 221 SGGEKKRLSFAAEVLTNPKLMFCDEPTSGLDSFMALTVMQVLKEMAMTGKTVICTIHQPS 280
Query: 401 YEIFAMLTKVVLISAGRTMFSGYRRDMLPYFSSIDYPCPAFKNPSDYYLDLVTL 454
E+++M K++L+S GRT F G + +F ++ PCP NP+DY++ L+ +
Sbjct: 281 SEVYSMFDKLLLMSEGRTAFLGSPEEAETFFRELEAPCPRNYNPADYFIQLLAI 334
Score = 33.5 bits (73), Expect = 0.006
Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 29/208 (13%)
Query: 592 GLYSRTVFILYDQFIEVLSAILTWLAYLVPSYAMSGLYAPTPGAFDAFYIYLGCMVLFFI 651
G+Y +++ + E I+ + Y M GL + F FYI G M+L
Sbjct: 483 GMYRPSIYFISKTLAESPIFIIIPVILTSVCYFMIGLNSQ---GF-RFYIACGIMILV-A 537
Query: 652 NIQMVCRATIFLVPMEKTASVIAGVCLLLGTLV-NGVMIQQADLPYYVKWLQYVSPSRWT 710
N+ + I V + ++ G L++ L+ G + + +P Y KWL ++S R+
Sbjct: 538 NVAISFGYLISCVSRSVSMALSIGPPLVIPFLLFGGFFLNVSSIPIYFKWLSFLSWFRYG 597
Query: 711 IPEILRRELSETVLRNSISKDLRCTNKQRPYPDIIVQSPCPPPNGTQVLSNYGYLRADNL 770
++ I++ TN Q P D+ PC P +G +L + + AD +
Sbjct: 598 NGALM------------INQWENVTNIQCPNADL----PC-PKDGHVILETFHFSEADFV 640
Query: 771 WEQTDDRFLIALTVFYAVFSLIAIIAFV 798
+ ++ L V F L+A +A +
Sbjct: 641 MD------VVMLAVLIVGFRLVAFLALL 662
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 132 bits (318), Expect = 1e-32
Identities = 76/234 (32%), Positives = 129/234 (55%), Gaps = 12/234 (5%)
Query: 230 GEILAVLATAQHEATGLLDVLA---GVRKKLSGDIVINGQPVASSTLRKVVAYVRNDTAL 286
GE+LA+L ++ T LL+ L +SG +NG PV+S TL AYV+ D
Sbjct: 104 GELLAILGSSGAGKTTLLNTLTFHTSSNLTVSGLRCVNGIPVSSKTLASQSAYVQQDDLF 163
Query: 287 CPTMSVEHTLRFHAALRKPRNTHSHVKMGDRDRINLLIEELGLEQVRDTNVGRLTR---- 342
T++V+ L F A LR R+ +M R+ +I +L L + ++T +G L R
Sbjct: 164 IGTLTVKEHLIFQALLRMDRDISYSQRMA---RVEEVISDLALSKCQNTPIGILGRIKGI 220
Query: 343 --SEIRRLNVACQLLLDMAILILDQPTKEMDIFDTFFLVEYLRNWASTGRVVIMSLHPPT 400
E +RL+ A ++L + ++ D+PT +D F +++ L+ A TG+ VI ++H P+
Sbjct: 221 SGGEKKRLSFAAEVLTNPKLMFCDEPTSGLDSFMALTVMQVLKEMAMTGKTVICTIHQPS 280
Query: 401 YEIFAMLTKVVLISAGRTMFSGYRRDMLPYFSSIDYPCPAFKNPSDYYLDLVTL 454
E+++M K++L+S GRT F G + +F ++ PCP NP+DY++ L+ +
Sbjct: 281 SEVYSMFDKLLLMSEGRTAFLGSPEEAETFFRELEAPCPRNYNPADYFIQLLAI 334
Score = 33.5 bits (73), Expect = 0.006
Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 29/208 (13%)
Query: 592 GLYSRTVFILYDQFIEVLSAILTWLAYLVPSYAMSGLYAPTPGAFDAFYIYLGCMVLFFI 651
G+Y +++ + E I+ + Y M GL + F FYI G M+L
Sbjct: 483 GMYRPSIYFISKTLAESPIFIIIPVTLTSVCYFMIGLNSH---GF-RFYIACGIMILV-A 537
Query: 652 NIQMVCRATIFLVPMEKTASVIAGVCLLLGTLV-NGVMIQQADLPYYVKWLQYVSPSRWT 710
N+ + I V + ++ G L++ L+ G + + +P Y KWL ++S R+
Sbjct: 538 NVAISFGYLISCVSRSVSMALSIGPPLVIPFLLFGGFFLNVSSIPIYFKWLSFLSWFRYG 597
Query: 711 IPEILRRELSETVLRNSISKDLRCTNKQRPYPDIIVQSPCPPPNGTQVLSNYGYLRADNL 770
++ I++ TN Q P D+ PC P +G +L + + AD +
Sbjct: 598 NGALM------------INQWENVTNIQCPNADL----PC-PKDGHVILETFHFSEADFV 640
Query: 771 WEQTDDRFLIALTVFYAVFSLIAIIAFV 798
+ ++ L V F L+A +A +
Sbjct: 641 MD------VVMLAVLIVGFRLVAFLALL 662
>AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor
candidate 62 protein.
Length = 320
Score = 24.2 bits (50), Expect = 3.7
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 343 SEIRRLNVACQLLLDMAILILDQPT 367
S +R +N+ Q++LD+ +LIL+ T
Sbjct: 51 STLRPINLLVQIILDVILLILNVHT 75
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 24.2 bits (50), Expect = 3.7
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 343 SEIRRLNVACQLLLDMAILILDQPT 367
S +R +N+ Q++LD+ +LIL+ T
Sbjct: 51 STLRPINLLVQIILDVILLILNVHT 75
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 24.2 bits (50), Expect = 3.7
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 343 SEIRRLNVACQLLLDMAILILDQPT 367
S +R +N+ Q++LD+ +LIL+ T
Sbjct: 371 STLRPINLLVQIILDVILLILNVHT 395
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 23.4 bits (48), Expect = 6.4
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 8 GLPRVFPPNHNGSQRSGTPKPKTS--IGSGMKPVQRIHRQSRGVRETSSGYDSSDNETTA 65
G P PP + P T+ + S + P R + + R+T + Y + + E
Sbjct: 202 GPPHQQPPIQQQPNQGQQPPGNTAAALPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEF 261
Query: 66 NYNKYSRKYR 75
++N+Y + R
Sbjct: 262 HFNRYLTRRR 271
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 23.4 bits (48), Expect = 6.4
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 770 LWEQTDD---RFLIALTVFYAVFSLIAIIAFVADCPSYRRSKE 809
LW T RFLI L + Y V + + + +C + R + E
Sbjct: 257 LWSCTSTNCPRFLIMLALSYTVIQEVMLFTILWNCQNTRVASE 299
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 23.4 bits (48), Expect = 6.4
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 8 GLPRVFPPNHNGSQRSGTPKPKTS--IGSGMKPVQRIHRQSRGVRETSSGYDSSDNETTA 65
G P PP + P T+ + S + P R + + R+T + Y + + E
Sbjct: 204 GPPHQQPPIQQQPNQGQQPPGNTAAALPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEF 263
Query: 66 NYNKYSRKYR 75
++N+Y + R
Sbjct: 264 HFNRYLTRRR 273
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.322 0.136 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,922
Number of Sequences: 317
Number of extensions: 8030
Number of successful extensions: 33
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 23
Number of HSP's gapped (non-prelim): 11
length of query: 823
length of database: 114,650
effective HSP length: 62
effective length of query: 761
effective length of database: 94,996
effective search space: 72291956
effective search space used: 72291956
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)
- SilkBase 1999-2023 -